Opened 7 months ago
Closed 7 months ago
#17140 closed defect (can't reproduce)
Nothing but OpenGL errors
Reported by: | Owned by: | Tom Goddard | |
---|---|---|---|
Priority: | normal | Milestone: | |
Component: | Graphics | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Windows-10-10.0.26100 ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC) Description Replace this text with list of actions that caused this problem to occur Log: Startup Errors --- bug | OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glGenVertexArrays, pyArgs = ( 1, , ), cArgs = (1, array([1], dtype=uint32)), cArguments = (1, array([1], dtype=uint32)) ) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError See log for complete Python traceback. notes | available bundle cache has not been initialized yet Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 87, in _expose_event self._create_opengl_context() File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 120, in _create_opengl_context r.initialize_opengl(lw, lh) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 1165, in initialize_opengl vao = GL.glGenVertexArrays(1) ^^^^^^^^^^^^^^^^^^^^^^^ File "src\\\latebind.pyx", line 39, in OpenGL_accelerate.latebind.LateBind.__call__ File "src\\\wrapper.pyx", line 318, in OpenGL_accelerate.wrapper.Wrapper.__call__ File "src\\\wrapper.pyx", line 311, in OpenGL_accelerate.wrapper.Wrapper.__call__ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\OpenGL\platform\baseplatform.py", line 415, in __call__ return self( *args, **named ) ^^^^^^^^^^^^^^^^^^^^^^ File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glGenVertexArrays, pyArgs = ( 1, <object object at 0x0000020354262710>, ), cArgs = (1, array([1], dtype=uint32)), cArguments = (1, array([1], dtype=uint32)) ) UCSF ChimeraX version: 1.9 (2024-12-11) © 2016-2024 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 88, in _expose_event self.status(self._last_message, self._last_color) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 154, in status r.draw_background() File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 1238, in draw_background GL.glClear(flags) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\OpenGL\platform\baseplatform.py", line 415, in __call__ return self( *args, **named ) ^^^^^^^^^^^^^^^^^^^^^^ File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glClear, cArguments = (16640,) ) OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glClear, cArguments = (16640,) ) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError See log for complete Python traceback. Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 88, in _expose_event self.status(self._last_message, self._last_color) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 155, in status self._draw_text(msg, color, secondary) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 165, in _draw_text draw_overlays(dlist, self._renderer) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 1608, in draw_overlays _draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 1567, in _draw_multiple d.draw(renderer, draw_pass) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 780, in draw self.draw_self(renderer, draw_pass) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 791, in draw_self self._draw_geometry(renderer, transparent_only = any_opaque) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 814, in _draw_geometry ds.activate_bindings(renderer) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 1923, in activate_bindings bi.activate() File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 2607, in activate GL.glBindVertexArray(self._vao_id) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\OpenGL\platform\baseplatform.py", line 415, in __call__ return self( *args, **named ) ^^^^^^^^^^^^^^^^^^^^^^ File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glBindVertexArray, cArguments = (2,) ) OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glBindVertexArray, cArguments = (2,) ) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError See log for complete Python traceback. > open 2JIE format mmcif fromDatabase redo Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 320, in interceptRequest self._callback(info) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 93, in _intercept return interceptor(request_info, *args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 353, in intercept chimerax_intercept(*args, view=view, session=session) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 455, in chimerax_intercept session.ui.thread_safe(defer, session, qurl.url(no_formatting), from_dir) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 438, in thread_safe func(*args, **kw) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 446, in defer cxcmd(session, topic) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 464, in cxcmd run(session, cmd) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\run.py", line 49, in run results = command.run(text, log=log, return_json=return_json) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\cli.py", line 3213, in run result = ci.function(session, **kw_args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\open_command\cmd.py", line 132, in cmd_open models = Command(session, registry=registry).run(provider_cmd_text, log=log)[0] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\cli.py", line 3213, in run result = ci.function(session, **kw_args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\open_command\cmd.py", line 168, in provider_open models, status = collated_open(session, database_name, ident, ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\open_command\cmd.py", line 526, in collated_open return remember_data_format() ^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\open_command\cmd.py", line 497, in remember_data_format models, status = func(*func_args, **func_kw) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\mmcif\\__init__.py", line 109, in fetch return fetcher(session, ident, ignore_cache=ignore_cache, **kw) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "src\\\mmcif.pyx", line 518, in chimerax.mmcif.mmcif.fetch_pdb_redo File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\logger.py", line 522, in status StatusLogger.status(self, msg, **kw) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\logger.py", line 220, in status if l.status(msg, color, secondary) and getattr( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 1048, in status sbar.status(msg, color, secondary) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 155, in status self._draw_text(msg, color, secondary) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 165, in _draw_text draw_overlays(dlist, self._renderer) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 1608, in draw_overlays _draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 1567, in _draw_multiple d.draw(renderer, draw_pass) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 780, in draw self.draw_self(renderer, draw_pass) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 791, in draw_self self._draw_geometry(renderer, transparent_only = any_opaque) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 852, in _draw_geometry ds.draw(self.display_style) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 1749, in draw eb.draw_elements(etype, ni) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 2859, in draw_elements GL.glDrawElementsInstanced(element_type, ne, GL.GL_UNSIGNED_INT, eo, ninst) File "src\\\latebind.pyx", line 39, in OpenGL_accelerate.latebind.LateBind.__call__ File "src\\\wrapper.pyx", line 318, in OpenGL_accelerate.wrapper.Wrapper.__call__ File "src\\\wrapper.pyx", line 311, in OpenGL_accelerate.wrapper.Wrapper.__call__ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\OpenGL\platform\baseplatform.py", line 415, in __call__ return self( *args, **named ) ^^^^^^^^^^^^^^^^^^^^^^ File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glDrawElementsInstanced, pyArgs = (4, 6, GL_UNSIGNED_INT, None, 1), cArgs = (4, 6, GL_UNSIGNED_INT, None, 1), cArguments = (4, 6, GL_UNSIGNED_INT, None, 1) ) OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glDrawElementsInstanced, pyArgs = (4, 6, GL_UNSIGNED_INT, None, 1), cArgs = (4, 6, GL_UNSIGNED_INT, None, 1), cArguments = (4, 6, GL_UNSIGNED_INT, None, 1) ) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError See log for complete Python traceback. > open 2JIE format mmcif fromDatabase redo Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 320, in interceptRequest self._callback(info) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 93, in _intercept return interceptor(request_info, *args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 353, in intercept chimerax_intercept(*args, view=view, session=session) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 455, in chimerax_intercept session.ui.thread_safe(defer, session, qurl.url(no_formatting), from_dir) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 438, in thread_safe func(*args, **kw) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 446, in defer cxcmd(session, topic) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 464, in cxcmd run(session, cmd) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\run.py", line 49, in run results = command.run(text, log=log, return_json=return_json) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\cli.py", line 3213, in run result = ci.function(session, **kw_args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\open_command\cmd.py", line 132, in cmd_open models = Command(session, registry=registry).run(provider_cmd_text, log=log)[0] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\cli.py", line 3213, in run result = ci.function(session, **kw_args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\open_command\cmd.py", line 168, in provider_open models, status = collated_open(session, database_name, ident, ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\open_command\cmd.py", line 526, in collated_open return remember_data_format() ^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\open_command\cmd.py", line 497, in remember_data_format models, status = func(*func_args, **func_kw) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\mmcif\\__init__.py", line 109, in fetch return fetcher(session, ident, ignore_cache=ignore_cache, **kw) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "src\\\mmcif.pyx", line 518, in chimerax.mmcif.mmcif.fetch_pdb_redo File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\logger.py", line 522, in status StatusLogger.status(self, msg, **kw) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\logger.py", line 220, in status if l.status(msg, color, secondary) and getattr( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 1048, in status sbar.status(msg, color, secondary) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 155, in status self._draw_text(msg, color, secondary) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 165, in _draw_text draw_overlays(dlist, self._renderer) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 1608, in draw_overlays _draw_multiple(drawings, r, Drawing.TRANSPARENT_DRAW_PASS) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 1567, in _draw_multiple d.draw(renderer, draw_pass) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 780, in draw self.draw_self(renderer, draw_pass) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 791, in draw_self self._draw_geometry(renderer, transparent_only = any_opaque) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 814, in _draw_geometry ds.activate_bindings(renderer) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 1924, in activate_bindings self.update_buffers() File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\drawing.py", line 1912, in update_buffers b.update_buffer_data(data) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 2831, in update_buffer_data GL.glBufferSubData(btype, 0, size, d) File "src\\\latebind.pyx", line 51, in OpenGL_accelerate.latebind.Curry.__call__ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\OpenGL\GL\VERSION\GL_1_5.py", line 125, in glBufferSubData return baseOperation( target, offset, size, data ) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "src\\\latebind.pyx", line 39, in OpenGL_accelerate.latebind.LateBind.__call__ File "src\\\wrapper.pyx", line 318, in OpenGL_accelerate.wrapper.Wrapper.__call__ File "src\\\wrapper.pyx", line 311, in OpenGL_accelerate.wrapper.Wrapper.__call__ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\OpenGL\platform\baseplatform.py", line 415, in __call__ return self( *args, **named ) ^^^^^^^^^^^^^^^^^^^^^^ File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glBufferSubData, pyArgs = ( 34962, 0, 48, array([[-1. , -1. , 0. ], [-0.6661765, -1. , 0. ], [-0.6661765, 1. ..., ), cArgs = ( 34962, 0, 48, array([[-1. , -1. , 0. ], [-0.6661765, -1. , 0. ], [-0.6661765, 1. ..., ), cArguments = ( 34962, 0, 48, array([[-1. , -1. , 0. ], [-0.6661765, -1. , 0. ], [-0.6661765, 1. ..., ) ) OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glBufferSubData, pyArgs = ( 34962, 0, 48, array([[-1. , -1. , 0. ], [-0.6661765, -1. , 0. ], [-0.6661765, 1. ..., ), cArgs = ( 34962, 0, 48, array([[-1. , -1. , 0. ], [-0.6661765, -1. , 0. ], [-0.6661765, 1. ..., ), cArguments = ( 34962, 0, 48, array([[-1. , -1. , 0. ], [-0.6661765, -1. , 0. ], [-0.6661765, 1. ..., ) ) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError See log for complete Python traceback. > open 2JIE format mmcif fromDatabase redo Chain information for 2jie #1 --- Chain | Description A | No description available Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 320, in interceptRequest self._callback(info) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 93, in _intercept return interceptor(request_info, *args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 353, in intercept chimerax_intercept(*args, view=view, session=session) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 455, in chimerax_intercept session.ui.thread_safe(defer, session, qurl.url(no_formatting), from_dir) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 438, in thread_safe func(*args, **kw) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 446, in defer cxcmd(session, topic) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\widgets\htmlview.py", line 464, in cxcmd run(session, cmd) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\run.py", line 49, in run results = command.run(text, log=log, return_json=return_json) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\cli.py", line 3213, in run result = ci.function(session, **kw_args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\open_command\cmd.py", line 132, in cmd_open models = Command(session, registry=registry).run(provider_cmd_text, log=log)[0] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\cli.py", line 3213, in run result = ci.function(session, **kw_args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\open_command\cmd.py", line 325, in provider_open session.logger.status(status, log=status) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\logger.py", line 522, in status StatusLogger.status(self, msg, **kw) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\logger.py", line 220, in status if l.status(msg, color, secondary) and getattr( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 1048, in status sbar.status(msg, color, secondary) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 154, in status r.draw_background() File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 1238, in draw_background GL.glClear(flags) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glClear, cArguments = (16640,) ) OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glClear, cArguments = (16640,) ) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError See log for complete Python traceback. An error occurred in drawing the scene. Redrawing graphics is now stopped to avoid a continuous stream of error messages. To restart graphics use the command "graphics restart" after changing the settings that caused the error. GLError( err = 1285, description = b'out of memory', baseOperation = glGetString, cArguments = (GL_VERSION,), result = b'3.3.0 - Build 30.0.101.3118' ) Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\updateloop.py", line 84, in draw_new_frame view.draw(check_for_changes = False) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\view.py", line 162, in draw if not self._use_opengl(): ^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\view.py", line 129, in _use_opengl self._initialize_opengl() File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\view.py", line 140, in _initialize_opengl r.check_opengl_version() File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 1121, in check_opengl_version vmajor, vminor = self.opengl_version_number() ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 1107, in opengl_version_number vs = self.opengl_version().split()[0].split('.')[:2] ^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 1103, in opengl_version return GL.glGetString(GL.GL_VERSION).decode('utf-8') ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glGetString, cArguments = (GL_VERSION,), result = b'3.3.0 - Build 30.0.101.3118' ) Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 836, in customEvent func(*args, **kw) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\logger.py", line 522, in status StatusLogger.status(self, msg, **kw) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\logger.py", line 220, in status if l.status(msg, color, secondary) and getattr( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 1048, in status sbar.status(msg, color, secondary) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 154, in status r.draw_background() File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 1238, in draw_background GL.glClear(flags) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glClear, cArguments = (16640,) ) OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glClear, cArguments = (16640,) ) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError See log for complete Python traceback. > select ~sel & ##selected Nothing selected Traceback (most recent call last): File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 2413, in _forward_keystroke self.tool_instance.session.ui.forward_keystroke(event) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 367, in forward_keystroke run(self.session, 'select ~sel & ##selected') File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\run.py", line 49, in run results = command.run(text, log=log, return_json=return_json) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\commands\cli.py", line 3213, in run result = ci.function(session, **kw_args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\std_commands\select.py", line 62, in select report_selection(session) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\std_commands\select.py", line 192, in report_selection session.logger.status(', '.join(lines) + ' selected', log = True) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\logger.py", line 522, in status StatusLogger.status(self, msg, **kw) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\core\logger.py", line 220, in status if l.status(msg, color, secondary) and getattr( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-packages\chimerax\ui\gui.py", line 1048, in status sbar.status(msg, color, secondary) File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\ui\statusbar.py", line 154, in status r.draw_background() File "C:\Program Files\ChimeraX 1.9\bin\Lib\site- packages\chimerax\graphics\opengl.py", line 1238, in draw_background GL.glClear(flags) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glClear, cArguments = (16640,) ) OpenGL.error.GLError: GLError( err = 1285, description = b'out of memory', baseOperation = glClear, cArguments = (16640,) ) File "src\\\errorchecker.pyx", line 58, in OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError See log for complete Python traceback. OpenGL version: unknown Could not make opengl context current Python: 3.11.4 Locale: en_US.cp1252 Qt version: PyQt6 6.7.1, Qt 6.7.1 Qt runtime version: 6.7.3 Qt platform: windows Manufacturer: Microsoft Corporation Model: Surface Pro 9 OS: Microsoft Windows 11 Home (Build 26100) Memory: 8,405,700,608 MaxProcessMemory: 137,438,953,344 CPU: 12 12th Gen Intel(R) Core(TM) i5-1235U OSLanguage: en-US Installed Packages: alabaster: 1.0.0 anyio: 4.7.0 appdirs: 1.4.4 asttokens: 3.0.0 auditwheel: 6.1.0 babel: 2.16.0 beautifulsoup4: 4.12.3 blockdiag: 3.0.0 blosc2: 3.0.0 build: 1.2.1 certifi: 2024.8.30 cftime: 1.6.4.post1 charset-normalizer: 3.4.0 ChimeraX-AddCharge: 1.5.18 ChimeraX-AddH: 2.2.6 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.5 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.16.1 ChimeraX-AlphaFold: 1.0.1 ChimeraX-AltlocExplorer: 1.1.2 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.58.8 ChimeraX-AtomicLibrary: 14.1.11 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 3.0.0 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.1 ChimeraX-BuildStructure: 2.13.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.4.0 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.4 ChimeraX-ChemGroup: 2.0.1 ChimeraX-Clashes: 2.3 ChimeraX-ColorActions: 1.0.5 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.6 ChimeraX-CommandLine: 1.2.5 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.9 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.4 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.3 ChimeraX-Dicom: 1.2.6 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.1.3 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.4.1 ChimeraX-Hbonds: 2.5 ChimeraX-Help: 1.3 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.3 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-KVFinder: 1.2.1 ChimeraX-Label: 1.1.14 ChimeraX-ListInfo: 1.2.2 ChimeraX-Log: 1.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.1 ChimeraX-Map: 1.3 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.1.6 ChimeraX-MCopy: 1.0 ChimeraX-MDcrds: 2.7.2 ChimeraX-MedicalToolbar: 1.1 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.14.2 ChimeraX-MMTF: 2.2 ChimeraX-ModelArchive: 1.0 ChimeraX-Modeller: 1.5.18 ChimeraX-ModelPanel: 1.5 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-MutationScores: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.2 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.14 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.6 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.4 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.2 ChimeraX-PubChem: 2.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.6.2 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.3.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.2 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.5.6 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.14 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.2.0 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-SimilarStructures: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.18.1 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2.3 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.41 ChimeraX-Umap: 1.0 ChimeraX-uniprot: 2.3.1 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.4.4 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.4 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.2.2 comtypes: 1.4.5 contourpy: 1.3.1 cxservices: 1.2.3 cycler: 0.12.1 Cython: 3.0.10 debugpy: 1.8.9 decorator: 5.1.1 docutils: 0.21.2 executing: 2.1.0 filelock: 3.15.4 fonttools: 4.55.3 funcparserlib: 2.0.0a0 glfw: 2.8.0 grako: 3.16.5 h11: 0.14.0 h5py: 3.12.1 html2text: 2024.2.26 httpcore: 1.0.7 httpx: 0.28.1 idna: 3.10 ihm: 1.3 imagecodecs: 2024.6.1 imagesize: 1.4.1 ipykernel: 6.29.5 ipython: 8.26.0 ipywidgets: 8.1.5 jedi: 0.19.1 Jinja2: 3.1.4 jupyter_client: 8.6.2 jupyter_core: 5.7.2 jupyterlab_widgets: 3.0.13 kiwisolver: 1.4.7 line_profiler: 4.1.3 lxml: 5.2.2 lz4: 4.3.3 MarkupSafe: 3.0.2 matplotlib: 3.9.2 matplotlib-inline: 0.1.7 msgpack: 1.0.8 ndindex: 1.9.2 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.3 nibabel: 5.2.0 nptyping: 2.5.0 numexpr: 2.10.2 numpy: 1.26.4 openvr: 1.26.701 packaging: 23.2 ParmEd: 4.2.2 parso: 0.8.4 pep517: 0.13.1 pillow: 10.4.0 pip: 24.2 pkginfo: 1.11.1 platformdirs: 4.3.6 prompt_toolkit: 3.0.48 psutil: 6.0.0 pure_eval: 0.2.3 py-cpuinfo: 9.0.0 pycollada: 0.8 pydicom: 2.4.4 pyelftools: 0.31 Pygments: 2.18.0 pynmrstar: 3.3.4 pynrrd: 1.0.0 PyOpenGL: 3.1.7 PyOpenGL-accelerate: 3.1.7 pyopenxr: 1.0.3401 pyparsing: 3.2.0 pyproject_hooks: 1.2.0 PyQt6-commercial: 6.7.1 PyQt6-Qt6: 6.7.3 PyQt6-WebEngine-commercial: 6.7.0 PyQt6-WebEngine-Qt6: 6.7.3 PyQt6-WebEngineSubwheel-Qt6: 6.7.3 PyQt6_sip: 13.8.0 python-dateutil: 2.9.0.post0 pytz: 2024.2 pywin32: 306 pyzmq: 26.2.0 qtconsole: 5.5.2 QtPy: 2.4.2 qtshim: 1.0 RandomWords: 0.4.0 requests: 2.32.3 scipy: 1.14.0 setuptools: 72.1.0 sfftk-rw: 0.8.1 six: 1.16.0 sniffio: 1.3.1 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.6 Sphinx: 8.0.2 sphinx-autodoc-typehints: 2.2.3 sphinxcontrib-applehelp: 2.0.0 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 2.0.0 sphinxcontrib-htmlhelp: 2.1.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 2.0.0 sphinxcontrib-serializinghtml: 2.0.0 stack-data: 0.6.3 superqt: 0.6.3 tables: 3.10.1 tcia_utils: 1.5.1 tifffile: 2024.7.24 tinyarray: 1.2.4 tornado: 6.4.2 traitlets: 5.14.3 typing_extensions: 4.12.2 tzdata: 2024.2 urllib3: 2.2.3 wcwidth: 0.2.13 webcolors: 24.6.0 wheel: 0.43.0 wheel-filename: 1.4.1 widgetsnbextension: 4.0.13 WMI: 1.5.1
Change History (2)
comment:1 by , 7 months ago
Component: | Unassigned → Graphics |
---|---|
Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → assigned |
Summary: | ChimeraX bug report submission → Nothing but OpenGL errors |
comment:2 by , 7 months ago
Resolution: | → can't reproduce |
---|---|
Status: | assigned → closed |
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