Opened 7 months ago

Closed 7 months ago

#17057 closed defect (fixed)

Number_Entry widget: could not convert string to float: ''

Reported by: chimerax-bug-report@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: General Controls Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        macOS-14.6.1-arm64-arm-64bit
ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC)
Description
Replace this text with list of actions that caused this problem to occur

Log:
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 1.9 (2024-12-11)  
© 2016-2024 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /Users/shirley/Downloads/emd_41280.map format ccp4

Opened emd_41280.map as #1, grid size 360,360,360, pixel 1.33, shown at level
0.513, step 2, values float32  

> open /Users/shirley/Downloads/8ea3.cif

8ea3.cif title:  
V-K CAST Transpososome from Scytonema hofmanni, major configuration [more
info...]  
  
Chain information for 8ea3.cif #2  
---  
Chain | Description | UniProt  
1 | Target_LE |   
2 | LE_R |   
3 | Non-target_R |   
4 | RE_F |   
5 | RE_R1 |   
6 | RE_R2 |   
7 | sg_RNA |   
A B C D E F G H I J K L | TnsC | A0A8J0PCL3_9CYAN 1-276  
O | Cas12k | A0A8M0FGU0_9CYAN 1-639  
Q | TniQ | A0A8J0PCL5_9CYAN 1-167  
S | 30S ribosomal protein S15 | D8EB41_ECOLX 1-89  
W X Y Z w x y z | TnsB |   
  
Non-standard residues in 8ea3.cif #2  
---  
ATP — adenosine-5'-triphosphate  
MG — magnesium ion  
  

> ui tool show "Fit in Map"

> fitmap #2 inMap #1

Fit molecule 8ea3.cif (#2) to map emd_41280.map (#1) using 55955 atoms  
average map value = 0.6359, steps = 392  
shifted from previous position = 76.6  
rotated from previous position = 9.16 degrees  
atoms outside contour = 28654, contour level = 0.51324  
  
Position of 8ea3.cif (#2) relative to emd_41280.map (#1) coordinates:  
Matrix rotation and translation  
0.99374786 -0.11055209 -0.01560232 -5.37859658  
0.11160986 0.98729914 0.11306482 -109.82112485  
0.00290460 -0.11409929 0.99346510 -5.68612637  
Axis -0.71372477 -0.05814673 0.69800853  
Axis point 0.00000000 -142.63266251 952.07178238  
Rotation angle (degrees) 9.15697388  
Shift along axis 6.25561174  
  
Average map value = 0.6359 for 55955 atoms, 28654 outside contour  

> volume style image

> volume showOutlineBox true

> volume showOutlineBox false

> volume style surface

> transparency 50

> show cartoons

[Repeated 2 time(s)]

> hide surfaces

> hide atoms

> fitmap #2 inMap #1

Fit molecule 8ea3.cif (#2) to map emd_41280.map (#1) using 55955 atoms  
average map value = 0.6359, steps = 40  
shifted from previous position = 0.02  
rotated from previous position = 0.00718 degrees  
atoms outside contour = 28658, contour level = 0.51324  
  
Position of 8ea3.cif (#2) relative to emd_41280.map (#1) coordinates:  
Matrix rotation and translation  
0.99373697 -0.11064568 -0.01563211 -5.33430217  
0.11170601 0.98729721 0.11298667 -109.83698897  
0.00293205 -0.11402523 0.99347353 -5.70229457  
Axis -0.71318553 -0.05832159 0.69854491  
Axis point 0.00000000 -142.69582137 952.86628716  
Rotation angle (degrees) 9.15776415  
Shift along axis 6.22690653  
  
Opened 8ea3.cif map 5 as #3, grid size 97,99,200, pixel 1.67, shown at level
0.0989, step 1, values float32  

> fitmap #2 inMap #1 resolution 5

Fit map 8ea3.cif map 5 in map emd_41280.map using 212365 points  
correlation = 0.628, correlation about mean = 0.02858, overlap = 4.876e+04  
steps = 40, shift = 0.435, angle = 0.339 degrees  
  
Position of 8ea3.cif map 5 (#3) relative to emd_41280.map (#1) coordinates:  
Matrix rotation and translation  
0.99352794 -0.11251636 -0.01556608 -4.87221425  
0.11357006 0.98643480 0.11852521 -111.30284199  
0.00201890 -0.11952595 0.99282902 -3.59823290  
Axis -0.72405608 -0.05348645 0.68766416  
Axis point 0.00000000 -125.70135846 921.51635481  
Rotation angle (degrees) 9.46163990  
Shift along axis 7.00657418  
  
Average map value = 0.6355 for 55955 atoms, 28679 outside contour  

> ui mousemode right "translate selected models"

> ui tool show "Fit to Segments"

> volume #1 step 4

> volume #1 step 2

> hide #!3 target m

> show #!3 target m

> hide #!3 target m

> close #3

Simulating map res 4.000, grid 2.000  

> molmap #2 4.000000 sigmaFactor 0.187 gridSpacing 2.000000 replace false

Opened 8ea3.cif map 4 as #3, grid size 78,79,163, pixel 2, shown at level
0.106, step 1, values float32  

> show #!3 target m

> hide #!3 target m

> ui mousemode right "next docked"

[Repeated 1 time(s)]

> view

Simulating map res 4.000, grid 2.000  

> molmap #2 4.000000 sigmaFactor 0.187 gridSpacing 2.000000 replace false

Opened 8ea3.cif map 4 as #4, grid size 78,79,163, pixel 2, shown at level
0.106, step 1, values float32  

> volume #1 change image level -0.0002717,0 level 0.5129,0.8 level 5.676,1

> volume #1 level 0.382

> volume #4 level 0.1324

> hide #!3 target m

> close #3

> close #4

> color zone #1 near #2 distance 7.98

> ui tool show "Map Coordinates"

> ui mousemode right zoom

> ui tool show "Fit in Map"

> fitmap #2 inMap #1

Fit molecule 8ea3.cif (#2) to map emd_41280.map (#1) using 55955 atoms  
average map value = 0.6359, steps = 80  
shifted from previous position = 0.434  
rotated from previous position = 0.336 degrees  
atoms outside contour = 24008, contour level = 0.38195  
  
Position of 8ea3.cif (#2) relative to emd_41280.map (#1) coordinates:  
Matrix rotation and translation  
0.98360573 -0.18025373 -0.00532483 244.24796436  
0.17986563 0.97850912 0.10083775 240.41048572  
-0.01296599 -0.10014235 0.99488863 247.58598714  
Axis -0.48725155 0.01852505 0.87306515  
Axis point -1119.26643806 1731.46650790 0.00000000  
Rotation angle (degrees) 11.90201178  
Shift along axis 101.60211311  
  

> fitmap #2 inMap #1

Fit molecule 8ea3.cif (#2) to map emd_41280.map (#1) using 55955 atoms  
average map value = 0.6359, steps = 44  
shifted from previous position = 0.00665  
rotated from previous position = 0.00847 degrees  
atoms outside contour = 24011, contour level = 0.38195  
  
Position of 8ea3.cif (#2) relative to emd_41280.map (#1) coordinates:  
Matrix rotation and translation  
0.98362866 -0.18012894 -0.00531181 244.24866569  
0.17974114 0.97853960 0.10076398 240.40663607  
-0.01295269 -0.10006909 0.99489618 247.59136541  
Axis -0.48723680 0.01853737 0.87307312  
Axis point -1120.16591383 1732.63557430 0.00000000  
Rotation angle (degrees) 11.89354239  
Shift along axis 101.61493529  
  

> transparency 0

> transparency 50

> fitmap #2 inMap #1

Fit molecule 8ea3.cif (#2) to map emd_41280.map (#1) using 55955 atoms  
average map value = 0.6359, steps = 40  
shifted from previous position = 0.0299  
rotated from previous position = 0.0173 degrees  
atoms outside contour = 24009, contour level = 0.38195  
  
Position of 8ea3.cif (#2) relative to emd_41280.map (#1) coordinates:  
Matrix rotation and translation  
0.98358781 -0.18034997 -0.00537645 244.24012018  
0.17996504 0.97847892 0.10095340 240.42425386  
-0.01294620 -0.10026410 0.99487663 247.56875609  
Axis -0.48749005 0.01833927 0.87293592  
Axis point -1118.69357610 1730.29820189 0.00000000  
Rotation angle (degrees) 11.91036144  
Shift along axis 101.45623570  
  

> fitmap #2 inMap #1

Fit molecule 8ea3.cif (#2) to map emd_41280.map (#1) using 55955 atoms  
average map value = 0.6359, steps = 40  
shifted from previous position = 0.0217  
rotated from previous position = 0.0121 degrees  
atoms outside contour = 24008, contour level = 0.38195  
  
Position of 8ea3.cif (#2) relative to emd_41280.map (#1) coordinates:  
Matrix rotation and translation  
0.98361161 -0.18022236 -0.00530146 244.24806083  
0.17983248 0.97851838 0.10080707 240.41088786  
-0.01298012 -0.10010838 0.99489187 247.58384749  
Axis -0.48719774 0.01861990 0.87309316  
Axis point -1119.46282827 1731.83026228 -0.00000000  
Rotation angle (degrees) 11.89946063  
Shift along axis 101.64308732  
  
Opened 8ea3.cif map 5 as #3, grid size 97,98,200, pixel 1.67, shown at level
0.0988, step 1, values float32  

> fitmap #2 inMap #1 resolution 5

Fit map 8ea3.cif map 5 in map emd_41280.map using 212364 points  
correlation = 0.6279, correlation about mean = 0.02825, overlap = 4.877e+04  
steps = 44, shift = 0.35, angle = 0.22 degrees  
  
Position of 8ea3.cif map 5 (#3) relative to emd_41280.map (#1) coordinates:  
Matrix rotation and translation  
0.98349279 -0.18080977 -0.00705416 244.02914774  
0.18055342 0.97803484 0.10415523 240.68135143  
-0.01193307 -0.10370957 0.99453604 247.61184475  
Axis -0.49858293 0.01170250 0.86676301  
Axis point -1118.07753334 1715.80370752 -0.00000000  
Rotation angle (degrees) 12.03186123  
Shift along axis 95.76859265  
  
Average map value = 0.6356 for 55955 atoms, 24020 outside contour  

> close #3

Traceback (most recent call last):  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/map_fit/fitgui.py", line 395, in _fit  
smap = self._simulated_map()  
^^^^^^^^^^^^^^^^^^^^^  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/map_fit/fitgui.py", line 342, in _simulated_map  
res = self._simulate_resolution.value  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/widgets/composite.py", line 185, in _get_value  
return self.string_to_value(self._line_edit.text())  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
ValueError: could not convert string to float: ''  
  
ValueError: could not convert string to float: ''  
  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/widgets/composite.py", line 185, in _get_value  
return self.string_to_value(self._line_edit.text())  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/map_fit/fitgui.py", line 395, in _fit  
smap = self._simulated_map()  
^^^^^^^^^^^^^^^^^^^^^  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/map_fit/fitgui.py", line 342, in _simulated_map  
res = self._simulate_resolution.value  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/widgets/composite.py", line 185, in _get_value  
return self.string_to_value(self._line_edit.text())  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
ValueError: could not convert string to float: ''  
  
ValueError: could not convert string to float: ''  
  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/widgets/composite.py", line 185, in _get_value  
return self.string_to_value(self._line_edit.text())  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/map_fit/fitgui.py", line 395, in _fit  
smap = self._simulated_map()  
^^^^^^^^^^^^^^^^^^^^^  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/map_fit/fitgui.py", line 342, in _simulated_map  
res = self._simulate_resolution.value  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/widgets/composite.py", line 185, in _get_value  
return self.string_to_value(self._line_edit.text())  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
ValueError: could not convert string to float: ''  
  
ValueError: could not convert string to float: ''  
  
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/widgets/composite.py", line 185, in _get_value  
return self.string_to_value(self._line_edit.text())  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  




OpenGL version: 4.1 Metal - 88.1
OpenGL renderer: Apple M1
OpenGL vendor: Apple

Python: 3.11.4
Locale: UTF-8
Qt version: PyQt6 6.7.1, Qt 6.7.1
Qt runtime version: 6.7.3
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: MacBook Air
      Model Identifier: MacBookAir10,1
      Model Number: MGN73ZP/A
      Chip: Apple M1
      Total Number of Cores: 8 (4 performance and 4 efficiency)
      Memory: 8 GB
      System Firmware Version: 11881.1.1
      OS Loader Version: 10151.140.19

Software:

    System Software Overview:

      System Version: macOS 14.6.1 (23G93)
      Kernel Version: Darwin 23.6.0
      Time since boot: 10 days, 1 hour, 43 minutes

Graphics/Displays:

    Apple M1:

      Chipset Model: Apple M1
      Type: GPU
      Bus: Built-In
      Total Number of Cores: 8
      Vendor: Apple (0x106b)
      Metal Support: Metal 3
      Displays:
        Color LCD:
          Display Type: Built-In Retina LCD
          Resolution: 2560 x 1600 Retina
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal


Installed Packages:
    alabaster: 1.0.0
    anyio: 4.7.0
    appdirs: 1.4.4
    appnope: 0.1.4
    asttokens: 3.0.0
    auditwheel: 6.1.0
    babel: 2.16.0
    beautifulsoup4: 4.12.3
    blockdiag: 3.0.0
    blosc2: 3.0.0
    build: 1.2.1
    certifi: 2023.11.17
    cftime: 1.6.4.post1
    charset-normalizer: 3.4.0
    ChimeraX-AddCharge: 1.5.18
    ChimeraX-AddH: 2.2.6
    ChimeraX-AlignmentAlgorithms: 2.0.2
    ChimeraX-AlignmentHdrs: 3.5
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.16.1
    ChimeraX-AlphaFold: 1.0.1
    ChimeraX-AltlocExplorer: 1.1.2
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.58.8
    ChimeraX-AtomicLibrary: 14.1.11
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 3.0.0
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.13.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.4.0
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.4
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.3
    ChimeraX-ColorActions: 1.0.5
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.6
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.9
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.4
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2.6
    ChimeraX-DistMonitor: 1.4.2
    ChimeraX-DockPrep: 1.1.3
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.4.1
    ChimeraX-Hbonds: 2.5
    ChimeraX-Help: 1.3
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.3
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-KVFinder: 1.2.1
    ChimeraX-Label: 1.1.14
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.3
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.1.6
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.7.2
    ChimeraX-MedicalToolbar: 1.1
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.14.2
    ChimeraX-MMTF: 2.2
    ChimeraX-ModelArchive: 1.0
    ChimeraX-Modeller: 1.5.18
    ChimeraX-ModelPanel: 1.5
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-MutationScores: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.2
    ChimeraX-NMRSTAR: 1.0.2
    ChimeraX-NRRD: 1.2
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.14
    ChimeraX-OrthoPick: 1.0.1
    ChimeraX-PDB: 2.7.6
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1.2
    ChimeraX-PubChem: 2.2
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.6.2
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.3.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.2
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-Segmentations: 3.5.6
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.14
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.2.0
    ChimeraX-ShowSequences: 1.0.3
    ChimeraX-SideView: 1.0.1
    ChimeraX-SimilarStructures: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.18.1
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.2.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.5
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.2.3
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.41
    ChimeraX-Umap: 1.0
    ChimeraX-uniprot: 2.3.1
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.4.4
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.4
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.2
    contourpy: 1.3.1
    cxservices: 1.2.3
    cycler: 0.12.1
    Cython: 3.0.10
    debugpy: 1.8.9
    decorator: 5.1.1
    docutils: 0.21.2
    executing: 2.1.0
    filelock: 3.15.4
    fonttools: 4.55.3
    funcparserlib: 2.0.0a0
    glfw: 2.8.0
    grako: 3.16.5
    h11: 0.14.0
    h5py: 3.12.1
    html2text: 2024.2.26
    httpcore: 1.0.7
    httpx: 0.28.1
    idna: 3.10
    ihm: 1.3
    imagecodecs: 2024.6.1
    imagesize: 1.4.1
    ipykernel: 6.29.5
    ipython: 8.26.0
    ipywidgets: 8.1.5
    jedi: 0.19.1
    Jinja2: 3.1.4
    jupyter_client: 8.6.2
    jupyter_core: 5.7.2
    jupyterlab_widgets: 3.0.13
    kiwisolver: 1.4.7
    line_profiler: 4.1.3
    lxml: 5.2.2
    lz4: 4.3.3
    MarkupSafe: 3.0.2
    matplotlib: 3.9.2
    matplotlib-inline: 0.1.7
    msgpack: 1.0.8
    ndindex: 1.9.2
    nest-asyncio: 1.6.0
    netCDF4: 1.6.5
    networkx: 3.3
    nibabel: 5.2.0
    nptyping: 2.5.0
    numexpr: 2.10.2
    numpy: 1.26.4
    openvr: 1.26.701
    packaging: 23.2
    ParmEd: 4.2.2
    parso: 0.8.4
    pep517: 0.13.1
    pexpect: 4.9.0
    pillow: 10.4.0
    pip: 24.2
    pkginfo: 1.11.1
    platformdirs: 4.3.6
    prompt_toolkit: 3.0.48
    psutil: 6.0.0
    ptyprocess: 0.7.0
    pure_eval: 0.2.3
    py-cpuinfo: 9.0.0
    pycollada: 0.8
    pydicom: 2.4.4
    pyelftools: 0.31
    Pygments: 2.18.0
    pynmrstar: 3.3.4
    pynrrd: 1.0.0
    PyOpenGL: 3.1.7
    PyOpenGL-accelerate: 3.1.7
    pyopenxr: 1.0.3401
    pyparsing: 3.2.0
    pyproject_hooks: 1.2.0
    PyQt6-commercial: 6.7.1
    PyQt6-Qt6: 6.7.3
    PyQt6-WebEngine-commercial: 6.7.0
    PyQt6-WebEngine-Qt6: 6.7.3
    PyQt6-WebEngineSubwheel-Qt6: 6.7.3
    PyQt6_sip: 13.8.0
    python-dateutil: 2.9.0.post0
    pytz: 2024.2
    pyzmq: 26.2.0
    qtconsole: 5.5.2
    QtPy: 2.4.2
    qtshim: 1.0
    RandomWords: 0.4.0
    requests: 2.32.3
    scipy: 1.14.0
    setuptools: 72.1.0
    sfftk-rw: 0.8.1
    six: 1.16.0
    sniffio: 1.3.1
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.6
    Sphinx: 8.0.2
    sphinx-autodoc-typehints: 2.2.3
    sphinxcontrib-applehelp: 2.0.0
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 2.0.0
    sphinxcontrib-htmlhelp: 2.1.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 2.0.0
    sphinxcontrib-serializinghtml: 2.0.0
    stack-data: 0.6.3
    superqt: 0.6.3
    tables: 3.10.1
    tcia_utils: 1.5.1
    tifffile: 2024.7.24
    tinyarray: 1.2.4
    tornado: 6.4.2
    traitlets: 5.14.3
    typing_extensions: 4.12.2
    tzdata: 2024.2
    urllib3: 2.2.3
    wcwidth: 0.2.13
    webcolors: 24.6.0
    wheel: 0.43.0
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.13

Change History (2)

comment:1 by pett, 7 months ago

Component: Unassigned → General Controls
Owner: set to Tom Goddard
Platform: → all
Project: → ChimeraX
Status: new → assigned
Summary: ChimeraX bug report submission → Number_Entry widget: could not convert string to float: ''

comment:2 by Tom Goddard, 7 months ago

Resolution: → fixed
Status: assigned → closed

Fixed.

User enabled fit with simulated map in the Fit in Map panel and set the resolution field to empty and tried to fit. I made this give a clearer error message.

Note: See TracTickets for help on using tickets.