![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 9 months ago
Last modified 9 months ago
#16699 closed defect
ChimeraX bug report submission — at Initial Version
| Reported by: | Owned by: | ||
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-14.5-arm64-arm-64bit
ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC)
Description
Last time you used ChimeraX it crashed.
This is a known crash that we are unable to fix. Here is information that may help you avoid this crash. The Qt window toolkit crashed due to a display configuration change, typically when waking from sleep or when an external display is disconnected or connected. This has only been seen on Mac computers. We hope a newer version of Qt will fix it. We update ChimeraX daily builds whenever a new Qt is released. You can check here https://www.cgl.ucsf.edu/chimerax/docs/troubleshoot.html#macdisplay to see if it has been fixed in a newer ChimeraX.
Fatal Python error: Segmentation fault
Current thread 0x00000001ee290c00 (most recent call first):
File "/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 330 in event_loop
File "/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1054 in init
File "/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1217 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtNetwork, PyQt6.QtPrintSupport, PyQt6.QtWebChannel, PyQt6.QtWebEngineCore, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.map._map, charset_normalizer.md, requests.packages.charset_normalizer.md, requests.packages.chardet.md, PIL._imaging, kiwisolver._cext, chimerax.pdb_lib._load_libs, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.surface._surface, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, lz4._version, lz4.frame._frame, msgpack._cmsgpack, chimerax.core._serialize, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets, chimerax.atomic._ribbons, chimerax.graphics._graphics, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif, chimerax.pdb._pdbio, lxml._elementpath, lxml.etree, PIL._imagingmath, chimerax.atom_search.ast, chimerax.chem_group._chem_group (total: 60)
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{
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"procRole" : "Foreground",
"version" : 2,
"userID" : 501,
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"modelCode" : "Mac15,12",
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"captureTime" : "2025-01-26 16:09:47.1853 -0800",
"codeSigningMonitor" : 1,
"incident" : "B72D722B-57BF-4F3C-9885-D14E7EFDD484",
"pid" : 19439,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2025-01-24 16:55:08.7857 -0800",
"procStartAbsTime" : 3270533406979,
"procExitAbsTime" : 4451655560080,
"procName" : "ChimeraX",
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"bundleInfo" : {"CFBundleShortVersionString":"1.9.0","CFBundleVersion":"1.9.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
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"parentProc" : "launchd",
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"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "3587406A-7241-238D-D039-C9AD257A1AF4",
"lowPowerMode" : 1,
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 4294967295,
"instructionByteStream" : {"beforePC":"fyMD1f17v6n9AwCRW+D\/l78DAJH9e8Go\/w9f1sADX9YQKYDSARAA1A==","atPC":"AwEAVH8jA9X9e7+p\/QMAkVDg\/5e\/AwCR\/XvBqP8PX9bAA1\/WcAqA0g=="},
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"sleepWakeUUID" : "0A4F168A-58EC-4064-AC36-ADD6769D2BBB",
"sip" : "enabled",
"vmRegionInfo" : "0x37e3724dc38 is not in any region. Bytes after previous region: 3359589588025 Bytes before following region: 101712490341320\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n commpage (reserved) 1000000000-7000000000 [384.0G] ---\/--- SM=NUL reserved VM address space (unallocated)\n---> GAP OF 0x5f9000000000 BYTES\n MALLOC_NANO 600000000000-600020000000 [512.0M] rw-\/rwx SM=PRV ",
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"termination" : {"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault: 11","byProc":"ChimeraX","byPid":19439},
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===== Log before crash start =====
UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession.cxs
Log from Fri Jan 24 15:51:19 2025UCSF ChimeraX version: 1.9rc202412032254
(2024-12-03)
© 2016-2024 Regents of the University of California. All rights reserved.
> open /Users/gozorows/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/TSRI/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#1.cxs
Log from Fri Jan 24 13:21:31 2025 Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
Chain information for Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1
---
Chain | Description
A | No description available
B | No description available
C | No description available
H | No description available
L | No description available
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q12BBM-069_BG505_P455_J2029_C1_3.3.mrc
Opened Q12BBM-069_BG505_P455_J2029_C1_3.3.mrc as #2, grid size 400,400,400,
pixel 1.03, shown at level 0.0501, step 2, values float32
> close #2
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb
Chain information for Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2
---
Chain | Description
A | No description available
B | No description available
C | No description available
H | No description available
L | No description available
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb
Chain information for Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3
---
Chain | Description
A | No description available
B | No description available
C | No description available
H | No description available
L | No description available
> open 7T77 fromDatabase pdb format mmcif
7t77 title:
HIV-1 Envelope ApexGT3.N130 in complex with PG9 Fab [more info...]
Chain information for 7t77 #4
---
Chain | Description
A C E | HIV Envelope ApexGT3.N130 gp120
B D F | HIV Envelope ApexGT3.N130 gp41
H | PG9 Fab Heavy Chain
L | PG9 Fab Light Chain
Non-standard residues in 7t77 #4
---
BMA — beta-D-mannopyranose (beta-D-mannose; D-mannose; mannose)
MAN — alpha-D-mannopyranose (alpha-D-mannose; D-mannose; mannose)
NAG — 2-acetamido-2-deoxy-beta-D-glucopyranose (N-acetyl-beta-D-glucosamine;
2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose;
2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE)
> hide atoms
> show cartoons
> ui tool show Matchmaker
> matchmaker #!2-4 to #1/H pairing bs
Computing secondary structure
[Repeated 3 time(s)] Parameters
---
Chain pairing | bs
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain H (#2), sequence
alignment score = 434.3
RMSD between 115 pruned atom pairs is 0.673 angstroms; (across all 127 pairs:
1.856)
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain H (#3), sequence
alignment score = 441.6
RMSD between 111 pruned atom pairs is 0.642 angstroms; (across all 127 pairs:
1.946)
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with
7t77, chain H (#4), sequence alignment score = 299.2
RMSD between 104 pruned atom pairs is 0.956 angstroms; (across all 123 pairs:
2.666)
> hide #!3 models
> hide #!2 models
> hide #!1 models
> show #!3 models
> hide #!3 models
> hide #!4 models
> show #!3 models
> show #!2 models
> show #!1 models
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc
> lighting soft
> hide atoms
> set bgColor #ffffff00
> graphics silhouettes true width 1.5
> camera ortho
> setattr g display false
Assigning display attribute to 4 items
> cartoon style width 1 thickness 1
> cartoon suppressBackboneDisplay true
> show cartoons
> style stick
Changed 65146 atom styles
> color #1/L #b188a7
> color #1/H #6a64a5
> color /C tan
> color #1/B #72a27e
> color #1/A #a7a7a7
> color :NAG,NAM,BMA,MAN blue
executed base_coloring.cxc
> hide #!3 models
> hide #!2 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!1 models
> show #!1 models
> hide #!4 models
> ui tool show Matchmaker
> matchmaker #4/E to #1/B pairing ss
Computing secondary structure
[Repeated 1 time(s)] Parameters
---
Chain pairing | ss
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain B (#1) with
7t77, chain E (#4), sequence alignment score = 1812.7
RMSD between 395 pruned atom pairs is 0.868 angstroms; (across all 442 pairs:
1.619)
> show #!4 models
> matchmaker #!1-3 to #4/E pairing bs
Computing secondary structure
[Repeated 3 time(s)] Parameters
---
Chain pairing | bs
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker 7t77, chain E (#4) with
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain C (#1), sequence
alignment score = 1853.8
RMSD between 388 pruned atom pairs is 0.920 angstroms; (across all 442 pairs:
1.596)
Matchmaker 7t77, chain E (#4) with
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain C (#2), sequence
alignment score = 1972.2
RMSD between 396 pruned atom pairs is 0.857 angstroms; (across all 433 pairs:
1.202)
Matchmaker 7t77, chain E (#4) with
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain B (#3), sequence
alignment score = 1924.9
RMSD between 394 pruned atom pairs is 0.930 angstroms; (across all 425 pairs:
1.266)
> matchmaker #!2-3 to #1/H pairing bs
Computing secondary structure
[Repeated 2 time(s)] Parameters
---
Chain pairing | bs
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain H (#2), sequence
alignment score = 434.3
RMSD between 115 pruned atom pairs is 0.673 angstroms; (across all 127 pairs:
1.856)
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain H (#3), sequence
alignment score = 441.6
RMSD between 111 pruned atom pairs is 0.642 angstroms; (across all 127 pairs:
1.946)
> matchmaker #4/E to #1/B pairing ss
Computing secondary structure
[Repeated 1 time(s)] Parameters
---
Chain pairing | ss
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain B (#1) with
7t77, chain E (#4), sequence alignment score = 1812.7
RMSD between 395 pruned atom pairs is 0.868 angstroms; (across all 442 pairs:
1.619)
> hide #!4 models
> ui tool show "Side View"
> select #1 /H:64,32,58,199J
25 atoms, 22 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /H:64,32,58,100J
33 atoms, 29 bonds, 4 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /H
998 atoms, 1023 bonds, 127 residues, 1 model selected
> hide sel atoms
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J
68 atoms, 68 bonds, 7 residues, 1 model selected
> show sel atoms
> color sel byhetero
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /L
863 atoms, 886 bonds, 110 residues, 1 model selected
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> show sel atoms
> select clear
> color #!1 byhetero
> select #B :158-196
Expected an objects specifier or a keyword
> select #1 /B :158-196
340 atoms, 345 bonds, 40 residues, 1 model selected
> select clear
> select #1 /H :31, 100B
22 atoms, 21 bonds, 2 residues, 1 model selected
> select #1 /H :31, 100B #1 /C :185, 169
41 atoms, 38 bonds, 4 residues, 1 model selected
> show sel atoms
> select #1 /H :100B #1 /A :160, 169
35 atoms, 33 bonds, 3 residues, 1 model selected
> hide sel atoms
> show sel atoms
> select clear
> ui tool show Distances
Exactly two atoms must be selected!
> select #1/A:169@NH1
1 atom, 1 residue, 1 model selected
> select #1/H:100B@O2
1 atom, 1 residue, 1 model selected
> select #1/A:169@NH1
1 atom, 1 residue, 1 model selected
> select add #1/H:100B@O2
2 atoms, 2 residues, 1 model selected
> distance #1/A:169@NH1 #1/H:100B@O2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ARG 169
NH1 and /H TYS 100B O2: 3.318Å
> select add #1/A:160@ND2
3 atoms, 3 residues, 1 model selected
> select subtract #1/H:100B@O2
2 atoms, 2 residues, 1 model selected
> distance #1/A:169@NH1 #1/A:160@ND2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ARG 169
NH1 and ASN 160 ND2: 3.304Å
> ~distance #1/A:169@NH1 #1/A:160@ND2
> select clear
> select #1/A:160@ND2
1 atom, 1 residue, 1 model selected
> select add #1/H:100B@O2
2 atoms, 2 residues, 1 model selected
> distance #1/A:160@ND2 #1/H:100B@O2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160
ND2 and /H TYS 100B O2: 3.314Å
> select subtract #1/H:100B
1 atom, 1 residue, 1 model selected
> select add #1/C:169@NH1
2 atoms, 2 residues, 1 model selected
> distance #1/A:160@ND2 #1/C:169@NH1
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160
ND2 and /C ARG 169 NH1: 14.345Å
> ~distance #1/A:160@ND2 #1/C:169@NH1
> select clear
> select add #1/H:100B
16 atoms, 16 bonds, 1 residue, 1 model selected
> select add #1/C:169@NH1
17 atoms, 16 bonds, 2 residues, 1 model selected
Exactly two atoms must be selected!
> select #1 /H :100B O #1 /C :169 NH1
Expected a keyword
> select #1 /H :100B O, #1 /C :169 NH1
Expected a keyword
> select #1 /H :100B O
Expected a keyword
> select #1 /H :100B @O
1 atom, 1 residue, 1 model selected
> select #1 /H :100B @O #1 /C :169 @NH1
2 atoms, 2 residues, 1 model selected
> distance #1/H:100B@O #1/C:169@NH1
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS
100B O and /C ARG 169 NH1: 2.954Å
> select clear
> hide #5.1 models
> show #!1 atoms
> hide #!1 atoms
> select #1 /H :31, 100B #1 /C :185, 169
41 atoms, 38 bonds, 1 pseudobond, 4 residues, 2 models selected
> show sel atoms
> select up
232 atoms, 234 bonds, 1 pseudobond, 28 residues, 2 models selected
> select up
4916 atoms, 5055 bonds, 1 pseudobond, 603 residues, 2 models selected
> select up
4935 atoms, 5074 bonds, 1 pseudobond, 605 residues, 2 models selected
> select clear
> select #1 /H :100B #1 /A :160, 169
35 atoms, 33 bonds, 2 pseudobonds, 3 residues, 2 models selected
> show sel atoms
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J
68 atoms, 68 bonds, 7 residues, 1 model selected
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> select clear
> select down
Nothing selected
> select down
Nothing selected
> select #1 /C :166
11 atoms, 10 bonds, 1 residue, 1 model selected
> show sel atoms
> select clear
> select #1 /C :166
11 atoms, 10 bonds, 1 residue, 1 model selected
> select clear
> select #1 /A :166
11 atoms, 10 bonds, 1 residue, 1 model selected
> select #1 :166
33 atoms, 30 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> select #1 :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> select clear
> select #1 :169
33 atoms, 30 bonds, 3 residues, 1 model selected
> select clear
> select ~sel & ##selected
Nothing selected
> select #1 :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> select clear
> view clip false
[Repeated 1 time(s)]
> view name TYR100B
> view list
Named views: TYR100B
> view TYR100B
[Repeated 1 time(s)]
Unsupported scale factor (0.000000) detected on Display0
[Repeated 1 time(s)]
QPainter::begin: Paint device returned engine == 0, type: 2
QPainter::translate: Painter not active
QPainter::setPen: Painter not active
QPainter::setBrush: Painter not active
QPainter::drawPoints: Painter not active
QPainter::end: Painter not active, aborted
QPainter::begin: Paint device returned engine == 0, type: 2
QPainter::translate: Painter not active
QPainter::setPen: Painter not active
QPainter::setBrush: Painter not active
QPainter::drawPoints: Painter not active
QPainter::end: Painter not active, aborted
Unsupported scale factor (0.000000) detected on Display0
[Repeated 4 time(s)]
> view TYR100B
[Repeated 1 time(s)]
> view name TYR100B
> view TYR100B
> save /Users/sphulera/Desktop/image46.png supersample 3
> save /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3.cxs
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> select add #2
15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected
> show sel atoms
> color (#!2 & sel) byhetero
> select clear
> show #!1 models
> hide #!2 models
> show #!2 models
> color #2 /L #b188a7
> color #2 /H #6a64a5
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc
> lighting soft
> hide atoms
> set bgColor #ffffff00
> graphics silhouettes true width 1.5
> camera ortho
> setattr g display false
Assigning display attribute to 5 items
> cartoon style width 1 thickness 1
> cartoon suppressBackboneDisplay true
> show cartoons
> style stick
Changed 65146 atom styles
> color #1/L #b188a7
> color #1/H #6a64a5
> color /C tan
> color #1/B #72a27e
> color #1/A #a7a7a7
> color :NAG,NAM,BMA,MAN blue
executed base_coloring.cxc
> hide #!2 models
> show #!2 models
> hide #!1 models
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc
> lighting soft
> hide atoms
> set bgColor #ffffff00
> graphics silhouettes true width 1.5
> camera ortho
> setattr g display false
Assigning display attribute to 5 items
> cartoon style width 1 thickness 1
> cartoon suppressBackboneDisplay true
> show cartoons
> style stick
Changed 65146 atom styles
> color /L #b188a7
> color /H #6a64a5
> color /C tan
> color /B #72a27e
> color /A #a7a7a7
> color :NAG,NAM,BMA,MAN blue
executed base_coloring.cxc
> show #!1 models
> show #!3 models
> hide #!3 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> view TYR100B
> select add #2
15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected
> show sel atoms
> color (#!2 & sel) byelement
> select clear
> color :NAG, NAM, BMA blue
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> hide #!2 atoms
> show #!1 models
> hide #!2 models
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> show sel atoms
> color sel byhetero
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> select #1 /H :100B #1 /A :160, 169
35 atoms, 33 bonds, 2 pseudobonds, 3 residues, 2 models selected
> show sel atoms
> color (#!1 & sel) byhetero
> show #!5 models
> select #1 /H :31, 100B #1 /C :185, 169
41 atoms, 38 bonds, 1 pseudobond, 4 residues, 2 models selected
> show sel atoms
> color (#!1 & sel) byelement
> select clear
> color /C tan
> color #!1,5 byhetero
> select clear
> hide #!1 models
> show #!2 models
> show #!1 models
> hide #!1 models
> show atoms #2 /H :53
Expected ',' or a keyword
> show #2 /H :53
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56
> color /H #6a64a5
> color /H byelement #6a64a5
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> color /H byelement atoms #6a64a5
Expected ',' or a keyword
> color byelement /H #6a64a5
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> color byelement /H
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> color #!2,5 byhetero
> color /H byhetero
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56 #2 /B :163,167,169,
> 170, 171, 168, 169, 171, 305
> color #2 byhetero
> select clear
> color #!2,5 byhetero
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56 #2 /B :163,167,169,
> 170, 171, 168, 169, 171, 305
> color #!2,5 byhetero
> select add #2
15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected
> color (#!2 & sel) byhetero
> select clear
> color /L #b188a7
> color /H #6a64a5
> color /C tan
> color /B #72a27e
> color /A #a7a7a7
> color #!2,5 byhetero
> view list
Named views: TYR100B
> view TYR100B
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56, 64, 100E, 100L, 58 #2
> /B :163,167,169, 170, 171, 168, 169, 171, 305, 322, 305
> distance #2 /H :100E @OD1 #2 /B :169
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or
one or more measurable objects and one or more atoms, got 10 atoms and 0
measurable objects
> distance #2 /H :100E @OD1 #2 /B :169 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
100E OD1 and /B LYS 169 NZ: 4.244Å
> distance #2 /H :100E @OD1 #2 /B :171 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
100E OD1 and /B LYS 171 NZ: 18.040Å
> ~distance #2/H:100E@OD1 #2/B:169@NZ
> distance #2 /H :100L @OD1 #2 /B :171 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
100L OD1 and /B LYS 171 NZ: 3.182Å
> ~distance #2/H:100L@OD1 #2/B:171@NZ
> ~distance #2/H:100E@OD1 #2/B:171@NZ
> distance #2 /H :100L @OD1 #2 /B :171 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
100L OD1 and /B LYS 171 NZ: 3.182Å
> distance #2 /H :100E @OD2 #2 /B :169 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
100E OD2 and /B LYS 169 NZ: 3.026Å
> distance #2 /H :58E @OD1 #2 /B :305 @NZ
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> distance #2 /H :58 @OD1 #2 /B :305 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
58 OD1 and /B LYS 305 NZ: 3.766Å
> ~distance #1/H:100B@O #1/C:169@NH1
> distance #2 /H :58 @OD1 #2 /B :305 @NZ
Distance already exists; modify distance properties with 'distance style'
> distance #2 /H :100C @OE1 #2 /A :169 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU
100C OE1 and /A LYS 169 NZ: 3.024Å
> show #2 /H :100C #2 /A :169
> show #2 /H :100C #2 /A :169
> select clear
> select :169
120 atoms, 108 bonds, 12 residues, 4 models selected
> show sel & #!2 atoms
> select clear
> select :160
96 atoms, 84 bonds, 12 residues, 4 models selected
> list view
Unknown command: list view
> view list
Named views: TYR100B
> view TYR100B
> select clear
> save /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#2.cxs
> save /Users/sphulera/Desktop/image47.png supersample 3
> show #!1 models
> hide #!2 models
> color #!1,5 byhetero
> save /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#1.cxs
——— End of log from Fri Jan 24 13:21:31 2025 ———
opened ChimeraX session
> ui tool show "Side View"
> show #!2 models
> hide #!1 models
> ui tool show H-Bonds
> hbonds reveal true
12911 hydrogen bonds found
> hbonds intraModel false intraRes false reveal true
6753 hydrogen bonds found
> select #2:MAN:NAG:BMA:FUC
971 atoms, 994 bonds, 73 residues, 1 model selected
> color sel lime
> color sel yellow
> select clear
> hide #!2 models
> show #!1 models
> select #1:MAN:NAG:BMA:FUC
1137 atoms, 1169 bonds, 84 residues, 1 model selected
> show sel atoms
> color sel yellow
> select #1/L:53
6 atoms, 5 bonds, 1 residue, 1 model selected
> select #1/B:160
8 atoms, 7 bonds, 1 residue, 1 model selected
> show sel atoms
> select clear
> select #1/C:160
8 atoms, 7 bonds, 1 residue, 1 model selected
> show sel atoms
> show #!3 models
> hide #!1 models
> select #3:MAN:NAG:BMA:FUC
877 atoms, 899 bonds, 65 residues, 1 model selected
> show sel atoms
> color sel yellow
> style sel sphere
Changed 877 atom styles
> select clear
> select #3 &~ #3:MAN:NAG:BMA:FUC
14917 atoms, 15255 bonds, 19 pseudobonds, 1896 residues, 2 models selected
> hide sel atoms
> select clear
> save "/Users/gozorows/OneDrive - The Scripps Research
> Institute/TSRI/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession.cxs"
——— End of log from Fri Jan 24 15:51:19 2025 ———
opened ChimeraX session
> show #!4 models
> hide #!3 models
> show #!3 models
> hide #!3 models
> show #!3 models
> hide #!3 models
> select :NAG, NAM, BMA
4074 atoms, 4169 bonds, 439 pseudobonds, 297 residues, 5 models selected
> style sel & #!4 sphere
Changed 1320 atom styles
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> style sel & #!4 sphere
Changed 1419 atom styles
> select clear
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> color (#!4 & sel) yellow
> select clear
> show #!3 models
> hide #!4 models
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> hide sel & #!3 atoms
> show #!4 models
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> hide sel & #!3-4 atoms
> select clear
> hide #!5 models
> hide #6 models
> hide #!3 models
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> ui tool show H-Bonds
> hbonds sel interModel false distSlop 2.0 intraMol false intraRes false
> reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb
3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb
4 7t77
273 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 135 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no hydrogen 3.432 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 135 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no hydrogen 2.973 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 136 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no hydrogen 4.422 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 155 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 720 O5 no hydrogen 4.201 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 702 O6 no hydrogen 3.176 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 208 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A MAN 736 O6 no hydrogen 3.284 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 235 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O5 no hydrogen 4.248 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 251 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O5 no hydrogen 4.381 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 294 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 O7 no hydrogen 4.181 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 307 NH1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 no hydrogen 4.612 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 307 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 no hydrogen 4.800 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 331 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O7 no hydrogen 4.787 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 362 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O4 no hydrogen 5.247 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A GLY 378 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O3 no hydrogen 4.757 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 387 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O5 no hydrogen 4.667 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 387 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O4 no hydrogen 4.738 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 412 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O7 no hydrogen 4.280 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 414 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 O5 no hydrogen 4.656 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 443 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O5 no hydrogen 2.930 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O3 no hydrogen 4.457 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O4 no hydrogen 5.614 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O5 no hydrogen 5.557 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O6 no hydrogen 5.053 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A VAL 445 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O4 no hydrogen 4.483 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A VAL 445 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O7 no hydrogen 3.947 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 612 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 741 O6 no hydrogen 3.240 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 702 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 160 OD1 no hydrogen 4.772 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A HIS 329 NE2 no hydrogen 3.156 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 726 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 740 O7 no hydrogen 3.585 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASP 321 OD1 no hydrogen 5.115 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASP 321 OD2 no hydrogen 4.393 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 235 O no hydrogen 4.514 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A PRO 237 O no hydrogen 5.107 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 446 OG no hydrogen 3.566 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A GLU 210 OE2 no hydrogen 3.983 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A MAN 736 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 208 OG no hydrogen 3.284 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 363 O no hydrogen 3.898 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O7 no hydrogen 4.530 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O7 no hydrogen 4.653 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 741 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 612 OG no hydrogen 3.240 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O7 no hydrogen 4.081 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 151 NE Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O7 no hydrogen 4.097 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 151 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O7 no hydrogen 4.741 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B TYR 173 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 no hydrogen 4.764 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 189 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 721 O3 no hydrogen 4.564 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 234 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 N2 no hydrogen 4.440 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 236 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 O5 no hydrogen 4.564 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 295 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no hydrogen 4.211 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ILE 323 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 no hydrogen 3.934 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 332 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O7 no hydrogen 4.451 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 388 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O6 no hydrogen 3.244 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O7 no hydrogen 4.058 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O5 no hydrogen 4.964 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 415 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O5 no hydrogen 4.375 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NE Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no hydrogen 4.034 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O5 no hydrogen 4.253 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O5 no hydrogen 2.957 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no hydrogen 3.647 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O3 no hydrogen 3.751 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O5 no hydrogen 4.891 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O6 no hydrogen 4.186 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B VAL 446 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O4 no hydrogen 4.465 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B VAL 446 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O7 no hydrogen 4.864 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH no hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 197 O no hydrogen 5.021 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 197 OD1 no hydrogen 4.555 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 293 OE1 no hydrogen 3.241 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B HIS 330 NE2 no hydrogen 3.205 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 721 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLY 152 O no hydrogen 4.951 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 262 OD1 no hydrogen 3.220 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 448 OD1 no hydrogen 4.270 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O5 no hydrogen 4.061 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 O no hydrogen 3.666 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 135 O no hydrogen 3.559 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B TYR 173 OH no hydrogen 4.764 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLY 321 O no hydrogen 4.744 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ILE 323 O no hydrogen 4.949 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 OD1 no hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 744 O3 no hydrogen 4.646 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG no hydrogen 2.808 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 OD1 no hydrogen 3.166 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 O no hydrogen 3.729 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 236 O no hydrogen 4.343 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 377 O no hydrogen 4.977 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLU 211 OE2 no hydrogen 4.991 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 O no hydrogen 5.042 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B BMA 738 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLU 211 OE1 no hydrogen 5.142 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O7 no hydrogen 3.107 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 no hydrogen 3.587 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 388 OG no hydrogen 3.244 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 no hydrogen 4.497 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O3 no hydrogen 3.587 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O5 no hydrogen 4.659 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O6 no hydrogen 4.497 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O5 no hydrogen 4.243 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 744 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O3 no hydrogen 4.646 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B BMA 746 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 748 O5 no hydrogen 4.487 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 747 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 46 OE1 no hydrogen 5.126 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 130 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O7 no hydrogen 4.559 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 158 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O6 no hydrogen 4.213 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 198 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O5 no hydrogen 4.689 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C LYS 252 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O5 no hydrogen 4.833 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 279 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 738 O5 no hydrogen 3.820 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 295 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O7 no hydrogen 4.723 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 332 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O7 no hydrogen 4.455 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 363 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 O4 no hydrogen 4.375 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLY 379 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3 no hydrogen 4.978 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O7 no hydrogen 4.765 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 741 O5 no hydrogen 3.388 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O7 no hydrogen 4.399 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O5 no hydrogen 5.001 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 415 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O6 no hydrogen 4.524 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ARG 444 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O6 no hydrogen 2.905 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C VAL 446 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O4 no hydrogen 4.178 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 160 OD1 no hydrogen 4.753 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE1 no hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.183 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 197 O no hydrogen 4.730 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 197 OD1 no hydrogen 4.557 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 293 OE1 no hydrogen 3.282 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 415 OG1 no hydrogen 4.524 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6 no hydrogen 4.963 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 729 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 88 OD1 no hydrogen 2.881 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASP 322 OD2 no hydrogen 4.764 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 743 O5 no hydrogen 2.989 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 743 O7 no hydrogen 2.443 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 158 OG no hydrogen 4.213 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.370 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no hydrogen 3.602 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no hydrogen 2.872 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2 no hydrogen 4.039 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no hydrogen 4.666 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O6 no hydrogen 4.352 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 3.794 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no hydrogen 2.884 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 no hydrogen 4.039 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 4.323 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 2.931 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 2.870 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ILE 97 O no hydrogen 3.751 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 101 OD2 no hydrogen 4.400 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 4.837 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 no hydrogen 4.352 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 734 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 236 OG1 no hydrogen 4.864 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE2 no hydrogen 3.916 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 377 O no hydrogen 4.413 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE1 no hydrogen 4.145 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE2 no hydrogen 4.790 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 736 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ARG 444 O no hydrogen 4.469 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG no hydrogen 4.447 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 364 O no hydrogen 3.722 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O3 no hydrogen 4.963 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O7 no hydrogen 5.150 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2 no hydrogen 4.370 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H VAL 2 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 no hydrogen 4.774 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 3.307 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 no hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O5 no hydrogen 4.887 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 no hydrogen 3.632 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 no hydrogen 4.886 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O6 no hydrogen 3.786 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O4 no hydrogen 3.574 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O5 no hydrogen 4.918 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 4.514 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 52 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O6 no hydrogen 4.679 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 no hydrogen 3.017 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O5 no hydrogen 4.351 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 N2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C ASP 167 OD2 no hydrogen 4.725 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no hydrogen 4.914 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE2 no hydrogen 4.749 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ASP 167 OD2 no hydrogen 4.751 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH no hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 OD1 no hydrogen 2.873 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG no hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 O no hydrogen 5.053 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 2.904 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 N2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 4.624 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH no hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.659 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 5.152 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.734 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 2.874 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 62 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O6 no hydrogen 4.891 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 98 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 no hydrogen 4.263 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O5 no hydrogen 4.369 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 no hydrogen 4.788 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 O4 no hydrogen 3.821 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 no hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 no hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 no hydrogen 3.011 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O5 no hydrogen 4.876 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 no hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 no hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 31 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 4.157 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O4 no hydrogen 3.878 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O7 no hydrogen 4.344 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 no hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.745 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O4 no hydrogen 2.941 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.593 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 67 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 3.874 N/A
7t77 #4/E ARG 308 NH1 7t77 #4/S NAG 1 O7 no hydrogen 2.971 N/A
7t77 #4/E ARG 308 NH2 7t77 #4/S NAG 1 O7 no hydrogen 3.095 N/A
7t77 #4/H SER 74 N 7t77 #4/j MAN 5 O6 no hydrogen 3.135 N/A
7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O4 no hydrogen 4.355 N/A
7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O6 no hydrogen 3.762 N/A
7t77 #4/H ARG 100B NE 7t77 #4/h NAG 1 O6 no hydrogen 2.959 N/A
7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O5 no hydrogen 3.418 N/A
7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O6 no hydrogen 2.953 N/A
7t77 #4/H ASN 100F ND2 7t77 #4/X NAG 1 O7 no hydrogen 5.183 N/A
7t77 #4/H TYR 100K OH 7t77 #4/j NAG 1 O4 no hydrogen 4.788 N/A
7t77 #4/H TYR 100K OH 7t77 #4/j NAG 2 O3 no hydrogen 4.518 N/A
7t77 #4/H ASN 100P N 7t77 #4/h MAN 5 O3 no hydrogen 4.984 N/A
7t77 #4/H ASN 100P ND2 7t77 #4/h MAN 5 O4 no hydrogen 2.860 N/A
7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O3 no hydrogen 3.359 N/A
7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O4 no hydrogen 3.351 N/A
7t77 #4/H HIS 100R NE2 7t77 #4/h MAN 5 O4 no hydrogen 3.440 N/A
7t77 #4/L SER 32 OG 7t77 #4/h MAN 6 O3 no hydrogen 2.926 N/A
7t77 #4/L SER 56 N 7t77 #4/X BMA 3 O3 no hydrogen 5.008 N/A
7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O2 no hydrogen 4.789 N/A
7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O3 no hydrogen 3.927 N/A
7t77 #4/X BMA 3 O2 7t77 #4/L SER 56 OG no hydrogen 4.789 N/A
7t77 #4/X BMA 3 O3 7t77 #4/L SER 56 OG no hydrogen 3.927 N/A
7t77 #4/X BMA 3 O4 7t77 #4/L SER 56 OG no hydrogen 4.978 N/A
7t77 #4/h NAG 1 O6 7t77 #4/H ASP 100 OD2 no hydrogen 4.044 N/A
7t77 #4/h NAG 1 O6 7t77 #4/H TYS 100G O2 no hydrogen 4.935 N/A
7t77 #4/h NAG 2 N2 7t77 #4/H ASP 100 OD2 no hydrogen 4.837 N/A
7t77 #4/h MAN 4 O2 7t77 #4/L SER 32 OG no hydrogen 3.818 N/A
7t77 #4/h MAN 5 O4 7t77 #4/H HIS 100R NE2 no hydrogen 3.440 N/A
7t77 #4/h MAN 6 O2 7t77 #4/L GLU 31 O no hydrogen 4.821 N/A
7t77 #4/h MAN 6 O3 7t77 #4/H TYR 100Q O no hydrogen 4.294 N/A
7t77 #4/h MAN 6 O3 7t77 #4/H HIS 100R ND1 no hydrogen 3.359 N/A
7t77 #4/h MAN 6 O3 7t77 #4/L SER 32 OG no hydrogen 2.926 N/A
7t77 #4/h MAN 6 O3 7t77 #4/L ASP 50 OD2 no hydrogen 3.718 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H ASN 100P O no hydrogen 3.545 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H TYR 100Q O no hydrogen 2.714 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H HIS 100R ND1 no hydrogen 3.351 N/A
7t77 #4/h MAN 6 O6 7t77 #4/H TYR 100Q O no hydrogen 4.679 N/A
7t77 #4/h MAN 6 O6 7t77 #4/L ASP 50 OD1 no hydrogen 3.389 N/A
7t77 #4/j NAG 2 N2 7t77 #4/H TYR 100K OH no hydrogen 2.783 N/A
7t77 #4/j NAG 2 O3 7t77 #4/H TYR 100K OH no hydrogen 4.518 N/A
7t77 #4/j BMA 3 O2 7t77 #4/H GLY 54 O no hydrogen 4.057 N/A
7t77 #4/j MAN 5 O2 7t77 #4/H ARG 71 O no hydrogen 5.083 N/A
7t77 #4/j MAN 5 O4 7t77 #4/H ASP 72 OD1 no hydrogen 3.091 N/A
7t77 #4/j MAN 5 O4 7t77 #4/H SER 74 OG no hydrogen 4.355 N/A
7t77 #4/j MAN 5 O6 7t77 #4/H ASP 72 OD1 no hydrogen 2.858 N/A
7t77 #4/j MAN 5 O6 7t77 #4/H SER 74 OG no hydrogen 3.762 N/A
273 hydrogen bonds found
> select clear
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> color (#!4 & sel) byhetero
> select clear
> hide #!4 models
> show #!4 models
> show #!3 models
> hide #!4 models
> show #!1 models
> hide #!3 models
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> hide sel & #!1 atoms
> hbonds sel interModel false distSlop 2.0 intraMol false intraRes false
> reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb
3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb
4 7t77
305 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O2 no hydrogen 3.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 158 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 3.190 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 no hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE2 no hydrogen 5.106 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 O no hydrogen 4.793 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 32 OD1 no hydrogen 2.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE1 no hydrogen 4.195 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E O no hydrogen 2.894 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG no hydrogen 4.810 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 NE Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100F OH no hydrogen 3.847 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD1 no hydrogen 2.460 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 3.284 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 2.527 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD2 no hydrogen 3.110 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 4.536 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG no hydrogen 4.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 189 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 O no hydrogen 3.911 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H THR 57 O no hydrogen 4.539 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 58 OD1 no hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ARG 169 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100D OH no hydrogen 3.779 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 4.851 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 4.640 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 5.017 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 2.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 33 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 170 OE1 no hydrogen 3.642 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no hydrogen 3.729 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no hydrogen 4.588 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no hydrogen 4.208 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 50 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 O no hydrogen 2.427 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.676 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.726 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASN 56 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 306 O no hydrogen 3.199 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LYS 64 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ILE 323 O no hydrogen 4.809 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.005 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.854 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 2.874 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 100H N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 4.086 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.866 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no hydrogen 2.822 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 OE1 no hydrogen 5.022 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no hydrogen 3.808 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no hydrogen 3.201 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no hydrogen 4.990 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no hydrogen 4.790 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no hydrogen 2.623 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no hydrogen 3.107 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no hydrogen 3.957 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 160 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100C OE2 no hydrogen 3.415 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 166 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD2 no hydrogen 5.159 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100C OE1 no hydrogen 3.024 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 132 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 O no hydrogen 4.886 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 27 OE1 no hydrogen 4.014 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 158 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 O no hydrogen 2.820 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 158 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 OD1 no hydrogen 2.681 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 166 NH1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD1 no hydrogen 5.030 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 168 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1 no hydrogen 3.856 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I O no hydrogen 2.892 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD1 no hydrogen 4.244 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD2 no hydrogen 3.026 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 100K OD1 no hydrogen 3.962 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100L OD1 no hydrogen 3.182 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L HIS 91 O no hydrogen 3.814 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 OD1 no hydrogen 3.567 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 OD2 no hydrogen 2.769 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 189 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 OD2 no hydrogen 4.683 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG no hydrogen 3.788 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 58 OD1 no hydrogen 3.766 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 58 OD2 no hydrogen 3.424 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG no hydrogen 4.653 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH no hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 OD1 no hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG no hydrogen 2.808 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 O no hydrogen 3.729 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 747 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 46 OE1 no hydrogen 5.126 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 185 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 30 OD1 no hydrogen 4.053 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE1 no hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.183 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.370 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 3.794 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 4.323 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 2.931 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 2.870 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ILE 97 O no hydrogen 3.751 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 101 OD2 no hydrogen 4.400 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 4.837 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H VAL 2 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 no hydrogen 4.774 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 28 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 185 O no hydrogen 2.901 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 30 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 183 O no hydrogen 4.839 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 33 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 O no hydrogen 4.901 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 33 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 170 OE1 no hydrogen 3.825 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLN 39 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 38 OE1 no hydrogen 3.146 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H LEU 45 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 99 O no hydrogen 5.079 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TRP 47 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LEU 96 O no hydrogen 4.378 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 54 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 O no hydrogen 4.552 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 O no hydrogen 4.688 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 3.307 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 no hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 O no hydrogen 2.914 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 O no hydrogen 3.475 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 OD1 no hydrogen 4.704 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 100K N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 O no hydrogen 3.356 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100M OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 O no hydrogen 2.952 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100N OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 55 OE1 no hydrogen 3.280 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100O N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 36 OH no hydrogen 3.309 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 135 O no hydrogen 3.869 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O5 no hydrogen 4.887 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 no hydrogen 3.632 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 27 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 O no hydrogen 3.797 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 30 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 OE1 no hydrogen 3.494 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 no hydrogen 4.886 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O6 no hydrogen 3.786 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 36 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100O O no hydrogen 4.364 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 38 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLN 39 OE1 no hydrogen 2.945 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O4 no hydrogen 3.574 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O5 no hydrogen 4.918 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 4.514 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH no hydrogen 3.152 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100L OD2 no hydrogen 3.175 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 52 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O6 no hydrogen 4.679 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 no hydrogen 3.017 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 OD1 no hydrogen 4.535 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O5 no hydrogen 4.351 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 89 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100M O no hydrogen 3.284 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 O no hydrogen 4.044 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 OE1 no hydrogen 4.779 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 93 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 O no hydrogen 3.603 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ASN 160 ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no hydrogen 3.857 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ARG 166 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.507 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ARG 166 NH2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.105 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100B OD2 no hydrogen 3.534 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no hydrogen 4.914 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE2 no hydrogen 4.749 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 132 OG1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L HIS 27 ND1 no hydrogen 4.383 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 158 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 O no hydrogen 2.863 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 158 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 OD1 no hydrogen 2.785 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 163 OG1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 33 OH no hydrogen 4.833 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NE Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no hydrogen 4.268 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NE Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.794 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NH2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no hydrogen 3.790 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 168 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 no hydrogen 4.296 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I O no hydrogen 2.830 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 no hydrogen 4.794 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.838 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K OD1 no hydrogen 2.984 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100L OD1 no hydrogen 2.681 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 OD1 no hydrogen 4.315 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 305 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 58 OD1 no hydrogen 3.334 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 305 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 58 OD2 no hydrogen 3.096 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG no hydrogen 3.385 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLY 55 O no hydrogen 4.656 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH no hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 OD1 no hydrogen 2.873 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG no hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 O no hydrogen 5.053 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H PHE 100D O no hydrogen 3.085 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no hydrogen 4.674 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C ASN 185 ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 28 OG no hydrogen 4.042 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 2.904 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 N2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 4.624 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH no hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.659 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 5.152 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.734 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 2.874 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TRP 47 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 96 O no hydrogen 4.180 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 50 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 4.991 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 50 NH2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 4.641 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 304 O no hydrogen 4.756 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 O no hydrogen 3.497 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 62 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O6 no hydrogen 4.891 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 98 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 no hydrogen 4.263 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O5 no hydrogen 4.369 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 no hydrogen 4.788 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 O4 no hydrogen 3.821 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 no hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 no hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ASP 167 O no hydrogen 2.790 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ASP 167 O no hydrogen 2.812 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 O no hydrogen 3.763 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 4.567 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100M OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 3.042 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L TYR 36 OH no hydrogen 2.952 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLN 89 OE1 no hydrogen 4.726 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 135 OG1 no hydrogen 4.920 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 no hydrogen 3.011 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O5 no hydrogen 4.876 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B GLN 130 OE1 no hydrogen 3.060 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 no hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 no hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 31 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 4.157 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L TYR 36 OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O O no hydrogen 4.223 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLN 38 NE2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLN 39 OE1 no hydrogen 2.438 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 46 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 101 O no hydrogen 4.804 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O4 no hydrogen 3.878 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O7 no hydrogen 4.344 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100N OH no hydrogen 5.013 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 no hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.745 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O4 no hydrogen 2.941 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.593 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 67 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 3.874 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B GLN 130 OE1 no hydrogen 3.855 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 96 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 60 OD1 no hydrogen 4.570 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L PHE 98 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H LEU 45 O no hydrogen 4.749 N/A
7t77 #4/A ASN 167 ND2 7t77 #4/H TYS 100G O1 no hydrogen 3.008 N/A
7t77 #4/A ARG 169 NH2 7t77 #4/H ASN 100C O no hydrogen 4.895 N/A
7t77 #4/C ARG 169 NH1 7t77 #4/H GLY 100D O no hydrogen 2.960 N/A
7t77 #4/C ARG 186 NH1 7t77 #4/H TYR 100N OH no hydrogen 4.377 N/A
7t77 #4/E LYS 168 NZ 7t77 #4/H TYS 100H O3 no hydrogen 3.135 N/A
7t77 #4/E ARG 169 N 7t77 #4/H ASN 100F O no hydrogen 3.121 N/A
7t77 #4/E LYS 171 N 7t77 #4/H ASP 100I O no hydrogen 4.240 N/A
7t77 #4/E LYS 171 NZ 7t77 #4/H ASP 100I OD1 no hydrogen 2.977 N/A
7t77 #4/E ARG 172 NH1 7t77 #4/H ASP 100L OD1 no hydrogen 3.106 N/A
7t77 #4/E ARG 172 NH2 7t77 #4/H ASP 100L OD1 no hydrogen 3.187 N/A
7t77 #4/E ARG 172 NH2 7t77 #4/H ASP 100L OD2 no hydrogen 4.092 N/A
7t77 #4/E TYR 173 OH 7t77 #4/H TYR 100K OH no hydrogen 3.176 N/A
7t77 #4/H ARG 31 NH1 7t77 #4/C ASP 185 OD2 no hydrogen 5.057 N/A
7t77 #4/H GLN 39 NE2 7t77 #4/L GLN 38 OE1 no hydrogen 2.971 N/A
7t77 #4/H SER 74 N 7t77 #4/j MAN 5 O6 no hydrogen 3.135 N/A
7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O4 no hydrogen 4.355 N/A
7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O6 no hydrogen 3.762 N/A
7t77 #4/H ARG 100B NE 7t77 #4/h NAG 1 O6 no hydrogen 2.959 N/A
7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O5 no hydrogen 3.418 N/A
7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O6 no hydrogen 2.953 N/A
7t77 #4/H ASN 100F N 7t77 #4/E ASN 167 O no hydrogen 3.325 N/A
7t77 #4/H ASN 100F ND2 7t77 #4/X NAG 1 O7 no hydrogen 5.183 N/A
7t77 #4/H TYS 100H N 7t77 #4/E ARG 169 O no hydrogen 2.976 N/A
7t77 #4/H TYR 100K N 7t77 #4/E LYS 171 O no hydrogen 4.380 N/A
7t77 #4/H TYR 100K OH 7t77 #4/E TYR 173 OH no hydrogen 3.176 N/A
7t77 #4/H TYR 100K OH 7t77 #4/j NAG 1 O4 no hydrogen 4.788 N/A
7t77 #4/H TYR 100K OH 7t77 #4/j NAG 2 O3 no hydrogen 4.518 N/A
7t77 #4/H ASN 100P N 7t77 #4/h MAN 5 O3 no hydrogen 4.984 N/A
7t77 #4/H ASN 100P ND2 7t77 #4/h MAN 5 O4 no hydrogen 2.860 N/A
7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O3 no hydrogen 3.359 N/A
7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O4 no hydrogen 3.351 N/A
7t77 #4/H HIS 100R NE2 7t77 #4/h MAN 5 O4 no hydrogen 3.440 N/A
7t77 #4/H MET 100T N 7t77 #4/L TYR 36 OH no hydrogen 2.800 N/A
7t77 #4/L GLN 1 N 7t77 #4/H ASP 61 OD2 no hydrogen 2.863 N/A
7t77 #4/L SER 32 OG 7t77 #4/H HIS 100R ND1 no hydrogen 4.017 N/A
7t77 #4/L SER 32 OG 7t77 #4/h MAN 6 O3 no hydrogen 2.926 N/A
7t77 #4/L SER 34 OG 7t77 #4/H HIS 100R O no hydrogen 4.978 N/A
7t77 #4/L TYR 36 OH 7t77 #4/H MET 100T O no hydrogen 3.815 N/A
7t77 #4/L GLN 38 NE2 7t77 #4/H GLN 39 OE1 no hydrogen 2.918 N/A
7t77 #4/L SER 56 N 7t77 #4/X BMA 3 O3 no hydrogen 5.008 N/A
7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O2 no hydrogen 4.789 N/A
7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O3 no hydrogen 3.927 N/A
7t77 #4/L TYR 87 OH 7t77 #4/H GLN 43 O no hydrogen 4.064 N/A
7t77 #4/L ARG 95 NH1 7t77 #4/H GLU 56 OE1 no hydrogen 3.124 N/A
7t77 #4/L ARG 95A NE 7t77 #4/H HIS 59 O no hydrogen 3.472 N/A
7t77 #4/L ARG 96 NE 7t77 #4/H GLU 95 OE2 no hydrogen 3.747 N/A
7t77 #4/L ARG 96 NH2 7t77 #4/H GLU 95 OE2 no hydrogen 2.855 N/A
7t77 #4/X BMA 3 O2 7t77 #4/L SER 56 OG no hydrogen 4.789 N/A
7t77 #4/X BMA 3 O3 7t77 #4/L SER 56 OG no hydrogen 3.927 N/A
7t77 #4/X BMA 3 O4 7t77 #4/L SER 56 OG no hydrogen 4.978 N/A
7t77 #4/h NAG 1 O6 7t77 #4/H ASP 100 OD2 no hydrogen 4.044 N/A
7t77 #4/h NAG 1 O6 7t77 #4/H TYS 100G O2 no hydrogen 4.935 N/A
7t77 #4/h NAG 2 N2 7t77 #4/H ASP 100 OD2 no hydrogen 4.837 N/A
7t77 #4/h MAN 4 O2 7t77 #4/L SER 32 OG no hydrogen 3.818 N/A
7t77 #4/h MAN 5 O4 7t77 #4/H HIS 100R NE2 no hydrogen 3.440 N/A
7t77 #4/h MAN 6 O2 7t77 #4/L GLU 31 O no hydrogen 4.821 N/A
7t77 #4/h MAN 6 O3 7t77 #4/H TYR 100Q O no hydrogen 4.294 N/A
7t77 #4/h MAN 6 O3 7t77 #4/H HIS 100R ND1 no hydrogen 3.359 N/A
7t77 #4/h MAN 6 O3 7t77 #4/L SER 32 OG no hydrogen 2.926 N/A
7t77 #4/h MAN 6 O3 7t77 #4/L ASP 50 OD2 no hydrogen 3.718 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H ASN 100P O no hydrogen 3.545 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H TYR 100Q O no hydrogen 2.714 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H HIS 100R ND1 no hydrogen 3.351 N/A
7t77 #4/h MAN 6 O6 7t77 #4/H TYR 100Q O no hydrogen 4.679 N/A
7t77 #4/h MAN 6 O6 7t77 #4/L ASP 50 OD1 no hydrogen 3.389 N/A
7t77 #4/j NAG 2 N2 7t77 #4/H TYR 100K OH no hydrogen 2.783 N/A
7t77 #4/j NAG 2 O3 7t77 #4/H TYR 100K OH no hydrogen 4.518 N/A
7t77 #4/j BMA 3 O2 7t77 #4/H GLY 54 O no hydrogen 4.057 N/A
7t77 #4/j MAN 5 O2 7t77 #4/H ARG 71 O no hydrogen 5.083 N/A
7t77 #4/j MAN 5 O4 7t77 #4/H ASP 72 OD1 no hydrogen 3.091 N/A
7t77 #4/j MAN 5 O4 7t77 #4/H SER 74 OG no hydrogen 4.355 N/A
7t77 #4/j MAN 5 O6 7t77 #4/H ASP 72 OD1 no hydrogen 2.858 N/A
7t77 #4/j MAN 5 O6 7t77 #4/H SER 74 OG no hydrogen 3.762 N/A
305 hydrogen bonds found
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> style sel & #!1 sphere
Changed 1137 atom styles
> select clear
> transparency 50 :NAG, NAM, BMA, MAN sphere
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 :NAG, NAM, BMA, MAN surfaces
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 :NAG, NAM, BMA, MAN
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 :NAG, NAM, BMA, MAN
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 #1 :NAG, NAM, BMA, MAN
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 #1 :NAG, NAM, BMA, MAN atoms
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency :NAG, NAM, BMA, MAN atoms
Missing or invalid "percent" argument: Expected a number
> transparency :NAG, NAM, BMA, MAN atoms 50
Missing or invalid "percent" argument: Expected a number
> transparency :NAG, NAM, BMA, MAN 50
> transparency :NAG, NAM, BMA, MAN 50 atoms
> transparency :NAG, NAM, BMA, MAN 10 atoms
> transparency :NAG, NAM, BMA, MAN 0 atoms
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> show #!4 models
> hide #!3 models
> show #!3 models
> hide #!4 models
> show #!2 models
> hide #!3 models
> show #!1 models
> hide #!2 models
> close #6
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 327 residues, 4 models selected
> select #1 :NAG, NAM, BMA, MAN
1137 atoms, 1169 bonds, 84 residues, 1 model selected
> select clear
> hide #!1 atoms
> show #!1 atoms
> hide #!1 atoms
> select #1 :NAG, NAM, BMA, MAN
1137 atoms, 1169 bonds, 84 residues, 1 model selected
> style sel sphere
Changed 1137 atom styles
> show sel atoms
> select clear
> save "/Users/sphulera/OneDrive - The Scripps Research
> Institute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession#1.cxs"
> close #5
> distance #1 /B :795 @O6 #1 /H :100A @OD2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795
O6 and /H ASP 100A OD2: 2.836Å
> show #1 /B :795 #1 /H :100A
> ui tool show Distances
> distance style color #ff85ff
> distance style color #d783ff
> distance style color black
> close #5
> distance #1 /B :795 @O6 #1 /H :100A @OD2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795
O6 and /H ASP 100A OD2: 2.836Å
> ~hbonds
> distance style symbol false
> distance style symbol true
> hide #5.1 models
> distance style dashes 8
> distance style dashes 7
> distance style dashes 6
> distance style dashes 5
> distance style dashes 4
> distance style dashes 3
> distance style dashes 2
> distance style dashes 3
> distance style dashes 4
> distance style dashes 5
> distance style dashes 6
> distance style dashes 7
> distance style dashes 8
> distance style dashes 9
> distance style dashes 10
> distance style dashes 11
> distance style dashes 12
> distance style dashes 13
> distance style dashes 14
> distance style radius 0.05
> distance #1 /B :793 @O2 #1 /L :53 @OG
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793
O2 and /L SER 53 OG: 3.462Å
> show #1 /B :793 #1 /L :53
> show #1 /B :794 #1 /L :52
> distance #1 /B :794 @O3 #1 /L :52 @O
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794
O3 and /L SER 52 O: 2.876Å
> distance #1 /A :796 @O6 #1 /H :100B @O3
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> show #1 /A :769 #1 /H :100B
> distance #1 /A :769 @O6 #1 /H :100B @O3
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769
O6 and /H TYS 100B O3: 3.280Å
> distance #1 /B :792 @O4 #1 /L :31 @OH
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792
O4 and /L TYR 31 OH: 3.268Å
> show #1 /B :792 #1 /L :31
> distance style radius 0.01
> distance style radius 0.02
> distance style radius 0.04
> distance style radius 0.045
> distance style radius 0.05
> distance style dashes 20
> select #1 /A,B,C,H,L
16689 atoms, 17142 bonds, 17 pseudobonds, 2048 residues, 3 models selected
> ui tool show H-Bonds
> hbonds sel restrict both interModel false distSlop 2.0 intraMol false
> intraRes false reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
71 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O2 no hydrogen 3.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 158 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 3.190 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 no hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE2 no hydrogen 5.106 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 O no hydrogen 4.793 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 32 OD1 no hydrogen 2.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE1 no hydrogen 4.195 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E O no hydrogen 2.894 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG no hydrogen 4.810 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 NE Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100F OH no hydrogen 3.847 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD1 no hydrogen 2.460 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 3.284 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 2.527 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD2 no hydrogen 3.110 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 4.536 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG no hydrogen 4.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 189 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 O no hydrogen 3.911 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H THR 57 O no hydrogen 4.539 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 58 OD1 no hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ARG 169 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100D OH no hydrogen 3.779 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 4.851 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 4.640 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 5.017 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 2.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 33 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 170 OE1 no hydrogen 3.642 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no hydrogen 3.729 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no hydrogen 4.588 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no hydrogen 4.208 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 50 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 O no hydrogen 2.427 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.676 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.726 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASN 56 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 306 O no hydrogen 3.199 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LYS 64 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ILE 323 O no hydrogen 4.809 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.005 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.854 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 2.874 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 100H N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 4.086 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.866 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no hydrogen 2.822 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 OE1 no hydrogen 5.022 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no hydrogen 3.808 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no hydrogen 3.201 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no hydrogen 4.990 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no hydrogen 4.790 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no hydrogen 2.623 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no hydrogen 3.107 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no hydrogen 3.957 N/A
71 hydrogen bonds found
> select clear
> ~hbonds
> select #1 /A,B,C: NAG, NAM, BMA, MAN #1 /H,L
2930 atoms, 3010 bonds, 5 pseudobonds, 314 residues, 2 models selected
> ui tool show H-Bonds
> hbonds sel restrict both interModel false distSlop 2.0 intraMol false
> intraRes false reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
35 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no hydrogen 3.729 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no hydrogen 4.588 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no hydrogen 4.208 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.866 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no hydrogen 2.822 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no hydrogen 3.808 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no hydrogen 3.201 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no hydrogen 4.990 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no hydrogen 4.790 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no hydrogen 2.623 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no hydrogen 3.107 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no hydrogen 3.957 N/A
35 hydrogen bonds found
> select clear
> select #1 /A,B,C,H,L ~:NAG,NAM,BMA,MAN
Expected a keyword
> select #1 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN
15552 atoms, 15921 bonds, 25 pseudobonds, 1964 residues, 3 models selected
> hide sel atoms
> ~hbonds
> show #1 /B :792 #1 /L :31
> show #1 /A :769 #1 /H :100B
> show #1 /B :794 #1 /L :52
> show #1 /B :792,794,795,793,769 #1 /L :52
> select clear
> show #1 /B :792,794,795,793,769 #1 /L :31,100B,53,52 #1 /H :100A
> select clear
> list view
Unknown command: list view
> view list
Named views: TYR100B
> view TYR100B
> select clear
> ui tool show "Side View"
> hide #!1 models
> show #!2 models
> select #2 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN
14860 atoms, 15167 bonds, 20 pseudobonds, 1886 residues, 2 models selected
> hide sel atoms
> select #2 :NAG,NAM,BMA,MAN
971 atoms, 994 bonds, 73 residues, 1 model selected
> style sel sphere
Changed 971 atom styles
> show #!1 models
> hide #!2 models
> select #A :NAG,NAM,BMA,MAN
Expected an objects specifier or a keyword
> select #1 /A :NAG,NAM,BMA,MAN
372 atoms, 381 bonds, 27 residues, 1 model selected
> select #1 /A,B,C :180
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> hide sel atoms
> select #1 /A,B,C :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select #1 /A,B,C :156
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /A,B,C :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select #1 /A,B,C :197
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select #1 /A,B,C :301
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> view list
Named views: TYR100B
> view TYR100B
> lighting soft
> lighting simple
> lighting soft
> lighting full
> lighting soft
> save "/Users/sphulera/OneDrive - The Scripps Research
> Institute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession#1.cxs"
> show #!2 models
> hide #!1 models
> select #2 /B :731 #2 /L 31
Expected a keyword
> select #2 /B :731 #2 /L :31
20 atoms, 19 bonds, 2 residues, 1 model selected
> show sel atoms
> distance #2 /B :731 @O6 #2 /L :31 @OG
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG
731 O6 and /L SER 31 OG: 2.808Å
> show #!1 models
> hide #!1 models
> distance #2 /B :703 @O4 #2 /L :50 @nz
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG
703 O4 and /L LYS 50 NZ: 3.574Å
> show #2 /B :703 #2 /L :50
> show #2 /C :703 #2 /H :100A
> distance #2 /C :703 @O6 #2 /H :100A @OE1
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG
703 O6 and /H GLU 100A OE1: 3.271Å
> distance #2 /C :733 @O4 #2 /H :97 @O
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN
733 O4 and /H ILE 97 O: 3.751Å
> show #2 /H :97
> distance #2 /B :730 @O6 #2 /L :1 @N
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG
730 O6 and /L ASP 1 N: 3.632Å
> show #2 /L :1 @N
> show #2 /L :1
> distance #2 /c :733 @O6 #2 /L :56 @OD1
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN
733 O6 and /L ASP 56 OD1: 8.841Å
> show #2 /c :733 #2 /L :56
> show #2 /c :744 #2 /H :1
> distance #2 /c :744 &O6 #2 /H :1 @N
Expected a keyword
> distance #2 /C :744 &O6 #2 /H :1 @N
Expected a keyword
> distance #2 /C :744 @O6 #2 /H :1 @N
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN
744 O6 and /H GLN 1 N: 2.843Å
> select clear
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!3 models
> distance #3 /C :729 @O3 #3 /L :1 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG
729 O3 and /L ASP 1 N: 95.755Å
> ~distance #2/C:733@O6 #2/L:56@OD1
> distance #3 /b :729 @O3 #3 /L :1 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
729 O3 and /L ASP 1 N: 3.011Å
> show #3 /b :729 @O3 #3 /L :1 @N
> hide #!1 models
> ~distance #3/C:729@O3 #3/L:1@N
> select #3 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN
14917 atoms, 15255 bonds, 19 pseudobonds, 1896 residues, 2 models selected
> hide sel atoms
> distance #3 /B :729 @O3 #3 /L :1 @OD1
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
729 O3 and /L ASP 1 OD1: 2.873Å
> show #3 /B :729 #3 /L :1
> color (#!3 & sel) byhetero
> select clear
> show #3 /B :734 #3 /L :66
> distance #3 /B :734 @O4 #3 /L :66 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN
734 O4 and /L GLY 66 N: 2.941Å
> distance #3 /B :733 @O4 #3 /L :31 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN
733 O4 and /L SER 31 N: 7.644Å
> ~distance #3/B:733@O4 #3/L:31@N
> distance #3 /B :733 @O6 #3 /L :31 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN
733 O6 and /L SER 31 N: 3.809Å
> show #3 /B :733 @O6 #3 /L :31 @N
> show #3 /B :733 #3 /L :31
> show #3 /B :731 #3 /H :100G
> distance #3 /B :731 @O4 #3 /H :100G@OH
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
731 O4 and /H TYR 100G OH: 18.489Å
> ~distance #3/B:731@O4 #3/H:100G@OH
> distance #3 /C :731 @O4 #3 /H :100G@OH
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG
731 O4 and /H TYR 100G OH: 3.821Å
> show #3 /c :160
> show #3 /A :160
> show #3 /B :160
> show #3 /C :733 /H :97
> distance #3 /C :733 @O6 /H :97 @O
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN
733 O6 and /H ILE 97 O: 2.874Å
> distance #3 /B :703 @O6 /H :100H @O
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
703 O6 and /H TYR 100H O: 8.058Å
> show #3 /B :703 @O6 /H :100H @O
> ~distance #3/B:703@O6 #3/H:100H@O
> show #3 /B :703 @O6 #3 /H :100H @O
> distance #3 /B :703 @O6 #3 /H :100H @O
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
703 O6 and /H TYR 100H O: 8.058Å
> ~distance #3/B:703@O6 #3/H:100H@O
> distance #3 /B :703 @O6 #3 /H :100H @OH
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
703 O6 and /H TYR 100H OH: 3.531Å
> show #3 /B :703 @O6 #3 /H :100H @OH
> show #3 /B :703 #3 /H :100H
> show #3 /C :733 #3 /L :56
> distance #3 /C :733 @O4 #3 /L :56 @OD2
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN
733 O4 and /L ASP 56 OD2: 3.734Å
> show #3 /B :133
> hide #!3 models
> show #!2 models
> show #2 :160
> show #2 :156
> distance save /Users/sphulera/Desktop/test
> show #2 :133
> show #2 :197
> show #2 :301
> distance #2 /B :733 @O6 #2 /L :31 @N
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN
733 O6 and /L SER 31 N: 3.309Å
> ~distance #3/B:733@O6 #3/L:31@N
> distance #2 /B :733 @O3 #2 /L :31 @OD1
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> distance #2 /C :733 @O3 #2 /L :31 @OD1
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> distance #2 /C :733 @O3 #2 /L :56 @OD1
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN
733 O3 and /L ASP 56 OD1: 2.931Å
> show #!1 models
> hide #!2 models
> view list
Named views: TYR100B
> view TYR100B
> ui tool show "Side View"
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> distance #2 /B :733 @O6 #2 /L :31 @N
Distance already exists; modify distance properties with 'distance style'
> show #!2 models
> hide #!3 models
> show #!3 models
> distance #3 /B :733 @O6 #3 /L :31 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN
733 O6 and /L SER 31 N: 3.809Å
> hide #!3 models
> show #!3 models
> hide #!2 models
> show #!2 models
> hide #!3 models
> show #!3 models
> hide #!3 models
> hide #!2 models
> show #!1 models
> view name G1
> view name G2
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> view name G3
> view g1
Expected an objects specifier or a view name or a keyword
> view G1
> hide #!3 models
> show #!2 models
> view G1
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!2 models
> show #!2 models
> hide #!2 models
> show #!3 models
> hide #!1 models
> show #!1 models
> view G2
> hide #!3 models
> view G1
> view G2
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> show #!1 models
> hide #!3 models
> view G2
> view G3
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> hide #!3 models
> show #!1 models
> view G1
> select clear
> save /Users/sphulera/Desktop/image53.png supersample 3
> view G2
> save /Users/sphulera/Desktop/image54.png supersample 3
> view G3
> save /Users/sphulera/Desktop/image55.png supersample 3
> show #!2 models
> hide #!1 models
> view G2
> save /Users/sphulera/Desktop/image56.png supersample 3
> view G3
> save /Users/sphulera/Desktop/image57.png supersample 3
> show #!3 models
> hide #!2 models
> view G2
> save /Users/sphulera/Desktop/image58.png supersample 3
> view G3
> save /Users/sphulera/Desktop/image59.png supersample 3
> view G2
> select clear
> select /L :24-34
349 atoms, 350 bonds, 47 residues, 4 models selected
> view G2
===== Log before crash end =====
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 88.1
OpenGL renderer: Apple M3
OpenGL vendor: Apple
Python: 3.11.4
Locale: UTF-8
Qt version: PyQt6 6.7.1, Qt 6.7.1
Qt runtime version: 6.7.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: Mac15,12
Model Number: Z1B600163LL/A
Chip: Apple M3
Total Number of Cores: 8 (4 performance and 4 efficiency)
Memory: 16 GB
System Firmware Version: 10151.121.1
OS Loader Version: 10151.121.1
Software:
System Software Overview:
System Version: macOS 14.5 (23F79)
Kernel Version: Darwin 23.5.0
Time since boot: 4 days, 23 hours, 31 minutes
Graphics/Displays:
Apple M3:
Chipset Model: Apple M3
Type: GPU
Bus: Built-In
Total Number of Cores: 10
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina Display
Resolution: 2560 x 1664 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
LG HDR 4K:
Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition)
UI Looks like: 1920 x 1080 @ 60.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
alabaster: 1.0.0
anyio: 4.7.0
appdirs: 1.4.4
appnope: 0.1.4
asttokens: 3.0.0
auditwheel: 6.1.0
babel: 2.16.0
beautifulsoup4: 4.12.3
blockdiag: 3.0.0
blosc2: 3.0.0
build: 1.2.1
certifi: 2023.11.17
cftime: 1.6.4.post1
charset-normalizer: 3.4.0
ChimeraX-AddCharge: 1.5.18
ChimeraX-AddH: 2.2.6
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.5
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.16.1
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.1.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.58.8
ChimeraX-AtomicLibrary: 14.1.11
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 3.0.0
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.13.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.4.0
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.4
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.3
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.6
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.9
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.4
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2.6
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.3
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-KVFinder: 1.2.1
ChimeraX-Label: 1.1.14
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.6
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.7.2
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.14.2
ChimeraX-MMTF: 2.2
ChimeraX-ModelArchive: 1.0
ChimeraX-Modeller: 1.5.18
ChimeraX-ModelPanel: 1.5
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-MutationScores: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.14
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.6
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.2
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.6.2
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.5.6
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.14
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.0
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-SimilarStructures: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.18.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.41
ChimeraX-Umap: 1.0
ChimeraX-uniprot: 2.3.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.4.4
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.4
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.2
contourpy: 1.3.1
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.0.10
debugpy: 1.8.9
decorator: 5.1.1
docutils: 0.21.2
executing: 2.1.0
filelock: 3.15.4
fonttools: 4.55.3
funcparserlib: 2.0.0a0
glfw: 2.8.0
grako: 3.16.5
h11: 0.14.0
h5py: 3.12.1
html2text: 2024.2.26
httpcore: 1.0.7
httpx: 0.28.1
idna: 3.10
ihm: 1.3
imagecodecs: 2024.6.1
imagesize: 1.4.1
ipykernel: 6.29.5
ipython: 8.26.0
ipywidgets: 8.1.5
jedi: 0.19.1
Jinja2: 3.1.4
jupyter_client: 8.6.2
jupyter_core: 5.7.2
jupyterlab_widgets: 3.0.13
kiwisolver: 1.4.7
line_profiler: 4.1.3
lxml: 5.2.2
lz4: 4.3.3
MarkupSafe: 3.0.2
matplotlib: 3.9.2
matplotlib-inline: 0.1.7
msgpack: 1.0.8
ndindex: 1.9.2
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.10.2
numpy: 1.26.4
openvr: 1.26.701
packaging: 23.2
ParmEd: 4.2.2
parso: 0.8.4
pep517: 0.13.1
pexpect: 4.9.0
pillow: 10.4.0
pip: 24.2
pkginfo: 1.11.1
platformdirs: 4.3.6
prompt_toolkit: 3.0.48
psutil: 6.0.0
ptyprocess: 0.7.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pycollada: 0.8
pydicom: 2.4.4
pyelftools: 0.31
Pygments: 2.18.0
pynmrstar: 3.3.4
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.3401
pyparsing: 3.2.0
pyproject_hooks: 1.2.0
PyQt6-commercial: 6.7.1
PyQt6-Qt6: 6.7.3
PyQt6-WebEngine-commercial: 6.7.0
PyQt6-WebEngine-Qt6: 6.7.3
PyQt6-WebEngineSubwheel-Qt6: 6.7.3
PyQt6_sip: 13.8.0
python-dateutil: 2.9.0.post0
pytz: 2024.2
pyzmq: 26.2.0
qtconsole: 5.5.2
QtPy: 2.4.2
qtshim: 1.0
RandomWords: 0.4.0
requests: 2.32.3
scipy: 1.14.0
setuptools: 72.1.0
sfftk-rw: 0.8.1
six: 1.16.0
sniffio: 1.3.1
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.6
Sphinx: 8.0.2
sphinx-autodoc-typehints: 2.2.3
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
stack-data: 0.6.3
superqt: 0.6.3
tables: 3.10.1
tcia_utils: 1.5.1
tifffile: 2024.7.24
tinyarray: 1.2.4
tornado: 6.4.2
traitlets: 5.14.3
typing_extensions: 4.12.2
tzdata: 2024.2
urllib3: 2.2.3
wcwidth: 0.2.13
webcolors: 24.6.0
wheel: 0.43.0
wheel-filename: 1.4.1
widgetsnbextension: 4.0.13
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