![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 9 months ago
Closed 9 months ago
#16699 closed defect (duplicate)
Window moved between screens(?)
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description (last modified by )
The following bug report has been submitted:
Platform: macOS-14.5-arm64-arm-64bit
ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC)
Description
Last time you used ChimeraX it crashed.
This is a known crash that we are unable to fix. Here is information that may help you avoid this crash. The Qt window toolkit crashed due to a display configuration change, typically when waking from sleep or when an external display is disconnected or connected. This has only been seen on Mac computers. We hope a newer version of Qt will fix it. We update ChimeraX daily builds whenever a new Qt is released. You can check here https://www.cgl.ucsf.edu/chimerax/docs/troubleshoot.html#macdisplay to see if it has been fixed in a newer ChimeraX.
Fatal Python error: Segmentation fault
Current thread 0x00000001ee290c00 (most recent call first):
File "/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 330 in event_loop
File "/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1054 in init
File "/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1217 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtNetwork, PyQt6.QtPrintSupport, PyQt6.QtWebChannel, PyQt6.QtWebEngineCore, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.map._map, charset_normalizer.md, requests.packages.charset_normalizer.md, requests.packages.chardet.md, PIL._imaging, kiwisolver._cext, chimerax.pdb_lib._load_libs, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.surface._surface, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, lz4._version, lz4.frame._frame, msgpack._cmsgpack, chimerax.core._serialize, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets, chimerax.atomic._ribbons, chimerax.graphics._graphics, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif, chimerax.pdb._pdbio, lxml._elementpath, lxml.etree, PIL._imagingmath, chimerax.atom_search.ast, chimerax.chem_group._chem_group (total: 60)
{"app_name":"ChimeraX","timestamp":"2025-01-26 16:09:56.00 -0800","app_version":"1.9.0","slice_uuid":"17982d98-65bc-3327-8526-577ec996453c","build_version":"1.9.0.0","platform":1,"bundleID":"edu.ucsf.cgl.ChimeraX","share_with_app_devs":0,"is_first_party":0,"bug_type":"309","os_version":"macOS 14.5 (23F79)","roots_installed":0,"name":"ChimeraX","incident_id":"B72D722B-57BF-4F3C-9885-D14E7EFDD484"}
{
"uptime" : 180000,
"procRole" : "Foreground",
"version" : 2,
"userID" : 501,
"deployVersion" : 210,
"modelCode" : "Mac15,12",
"coalitionID" : 1768,
"osVersion" : {
"train" : "macOS 14.5",
"build" : "23F79",
"releaseType" : "User"
},
"captureTime" : "2025-01-26 16:09:47.1853 -0800",
"codeSigningMonitor" : 1,
"incident" : "B72D722B-57BF-4F3C-9885-D14E7EFDD484",
"pid" : 19439,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2025-01-24 16:55:08.7857 -0800",
"procStartAbsTime" : 3270533406979,
"procExitAbsTime" : 4451655560080,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.9.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.9.0","CFBundleVersion":"1.9.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"292D261C-48B5-505D-96AA-1C3B54C1D842","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "3587406A-7241-238D-D039-C9AD257A1AF4",
"lowPowerMode" : 1,
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 4294967295,
"instructionByteStream" : {"beforePC":"fyMD1f17v6n9AwCRW+D\/l78DAJH9e8Go\/w9f1sADX9YQKYDSARAA1A==","atPC":"AwEAVH8jA9X9e7+p\/QMAkVDg\/5e\/AwCR\/XvBqP8PX9bAA1\/WcAqA0g=="},
"wakeTime" : 2624,
"sleepWakeUUID" : "0A4F168A-58EC-4064-AC36-ADD6769D2BBB",
"sip" : "enabled",
"vmRegionInfo" : "0x37e3724dc38 is not in any region. Bytes after previous region: 3359589588025 Bytes before following region: 101712490341320\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n commpage (reserved) 1000000000-7000000000 [384.0G] ---\/--- SM=NUL reserved VM address space (unallocated)\n---> GAP OF 0x5f9000000000 BYTES\n MALLOC_NANO 600000000000-600020000000 [512.0M] rw-\/rwx SM=PRV ",
"exception" : {"codes":"0x0000000000000001, 0x0000837e3724dc38","rawCodes":[1,144578114280504],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000837e3724dc38 -> 0x0000037e3724dc38 (possible pointer authentication failure)"},
"termination" : {"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault: 11","byProc":"ChimeraX","byPid":19439},
"vmregioninfo" : "0x37e3724dc38 is not in any region. Bytes after previous region: 3359589588025 Bytes before following region: 101712490341320\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n commpage (reserved) 1000000000-7000000000 [384.0G] ---\/--- SM=NUL reserved VM address space (unallocated)\n---> GAP OF 0x5f9000000000 BYTES\n MALLOC_NANO 600000000000-600020000000 [512.0M] rw-\/rwx SM=PRV ",
"extMods" : {"caller":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"system":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"targeted":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"warnings":0},
"faultingThread" : 0,
"threads" : [{"threadState":{"x":[{"value":0},{"value":0},{"value":1},{"value":4697914008},{"value":99},{"value":95},{"value":3458870066980709472},{"value":0},{"value":1373484244169906820},{"value":1373484247695677060},{"value":14757395258967641293},{"value":4294967286},{"value":4697913938},{"value":0},{"value":54},{"value":4294967280},{"value":328},{"value":8462293288},{"value":0},{"value":11},{"value":8290634752,"symbolLocation":0,"symbol":"_main_thread"},{"value":259},{"value":8290634976,"symbolLocation":224,"symbol":"_main_thread"},{"value":1},{"value":4332963376,"symbolLocation":0,"symbol":"faulthandler_handlers"},{"value":8296194048,"symbolLocation":0,"symbol":"OBJC_IVAR_$_NSCGSStatusItem._selectedContentFrame"},{"value":8296194048,"symbolLocation":0,"symbol":"OBJC_IVAR_$_NSCGSStatusItem._selectedContentFrame"},{"value":5},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547663904},"cpsr":{"value":1073745920},"fp":{"value":4697914080},"sp":{"value":4697914048},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547434080,"matchesCrashFrame":1},"far":{"value":0}},"id":1945529,"triggered":true,"name":"CrBrowserMain","queue":"com.apple.main-thread","frames":[{"imageOffset":39520,"symbol":"__pthread_kill","symbolLocation":8,"imageIndex":156},{"imageOffset":27680,"symbol":"pthread_kill","symbolLocation":288,"imageIndex":157},{"imageOffset":262624,"symbol":"raise","symbolLocation":32,"imageIndex":158},{"imageOffset":2417160,"symbol":"faulthandler_fatal_error","symbolLocation":392,"imageIndex":154},{"imageOffset":17796,"symbol":"_sigtramp","symbolLocation":56,"imageIndex":159},{"imageOffset":349344,"imageIndex":86},{"imageOffset":349160,"imageIndex":86},{"imageOffset":380476,"symbol":"_NSViewHierarchyDidChangeBackingProperties","symbolLocation":244,"imageIndex":160},{"imageOffset":11481908,"symbol":"-[NSWindow _postWindowDidChangeBackingPropertiesAndDisplayWindowForPreviousBackingScaleFactor:previousColorSpace:]","symbolLocation":192,"imageIndex":160},{"imageOffset":2095700,"symbol":"__67-[NSWindow _updateSettingsSendingScreenChangeNotificationToScreen:]_block_invoke","symbolLocation":448,"imageIndex":160},{"imageOffset":510116,"symbol":"NSPerformVisuallyAtomicChange","symbolLocation":108,"imageIndex":160},{"imageOffset":2095240,"symbol":"-[NSWindow _updateSettingsSendingScreenChangeNotificationToScreen:]","symbolLocation":96,"imageIndex":160},{"imageOffset":515444,"symbol":"-[NSWindow _setFrameCommon:display:fromServer:]","symbolLocation":1856,"imageIndex":160},{"imageOffset":11490008,"symbol":"-[NSWindow _windowMovedToRect:dueToMoveEvent:]","symbolLocation":184,"imageIndex":160},{"imageOffset":1469112,"symbol":"-[NSWindow _windowMoved:]","symbolLocation":832,"imageIndex":160},{"imageOffset":1468204,"symbol":"-[NSWindow _internalHandleAppKitDefinedEvent:]","symbolLocation":152,"imageIndex":160},{"imageOffset":1467892,"symbol":"-[NSWindow(NSEventRouting) _reallySendEvent:isDelayedEvent:]","symbolLocation":776,"imageIndex":160},{"imageOffset":1466648,"symbol":"-[NSWindow(NSEventRouting) sendEvent:]","symbolLocation":284,"imageIndex":160},{"imageOffset":423528,"imageIndex":86},{"imageOffset":8579308,"symbol":"-[NSApplication(NSEventRouting) sendEvent:]","symbolLocation":1800,"imageIndex":160},{"imageOffset":38456,"imageIndex":86},{"imageOffset":4704412,"symbol":"-[NSApplication _handleEvent:]","symbolLocation":60,"imageIndex":160},{"imageOffset":184512,"symbol":"-[NSApplication run]","symbolLocation":512,"imageIndex":160},{"imageOffset":88376,"imageIndex":86},{"imageOffset":572692,"symbol":"QEventLoop::exec(QFlags)","symbolLocation":540,"imageIndex":111},{"imageOffset":534620,"symbol":"QCoreApplication::exec()","symbolLocation":112,"imageIndex":111},{"imageOffset":2477972,"symbol":"meth_QApplication_exec(_object*, _object*)","symbolLocation":96,"imageIndex":104},{"imageOffset":1004504,"symbol":"cfunction_call","symbolLocation":96,"imageIndex":154},{"imageOffset":594156,"symbol":"_PyObject_MakeTpCall","symbolLocation":128,"imageIndex":154},{"imageOffset":1789244,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":54984,"imageIndex":154},{"imageOffset":1729512,"symbol":"PyEval_EvalCode","symbolLocation":276,"imageIndex":154},{"imageOffset":1707120,"symbol":"builtin_exec","symbolLocation":428,"imageIndex":154},{"imageOffset":1007044,"symbol":"cfunction_vectorcall_FASTCALL_KEYWORDS","symbolLocation":80,"imageIndex":154},{"imageOffset":1788292,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":54032,"imageIndex":154},{"imageOffset":1811404,"symbol":"_PyEval_Vector","symbolLocation":156,"imageIndex":154},{"imageOffset":2389028,"symbol":"pymain_run_module","symbolLocation":256,"imageIndex":154},{"imageOffset":2387652,"symbol":"Py_RunMain","symbolLocation":1784,"imageIndex":154},{"imageOffset":2392180,"symbol":"pymain_main","symbolLocation":52,"imageIndex":154},{"imageOffset":2392116,"symbol":"Py_Main","symbolLocation":36,"imageIndex":154},{"imageOffset":15700,"symbol":"main","symbolLocation":128,"imageIndex":155},{"imageOffset":24800,"symbol":"start","symbolLocation":2360,"imageIndex":161}]},{"id":1945637,"name":"ThreadPoolServiceThread","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553146069760},{"value":4},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":3},{"value":9895604652290},{"value":6344743504},{"value":37891},{"value":1},{"value":1},{"value":369},{"value":6401110016},{"value":0},{"value":6368235552},{"value":4313841344},{"value":6401109328},{"value":0},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6234504104},"cpsr":{"value":2684358656},"fp":{"value":6401109312},"sp":{"value":6401109216},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547448140},"far":{"value":0}},"frames":[{"imageOffset":53580,"symbol":"kevent64","symbolLocation":8,"imageIndex":156},{"imageOffset":71187368,"imageIndex":94},{"imageOffset":71186848,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70856668,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945638,"name":"ThreadPoolForegroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":163840117440512},{"value":0},{"value":163840117440512},{"value":32},{"value":0},{"value":18446744073709550527},{"value":38147},{"value":0},{"value":1},{"value":38147},{"value":0},{"value":2043},{"value":2279946526},{"value":18446744073709551569},{"value":8462295880},{"value":0},{"value":0},{"value":32},{"value":163840117440512},{"value":0},{"value":163840117440512},{"value":6409530672},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":6409530016},"sp":{"value":6409529936},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902644,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945639,"name":"ThreadPoolBackgroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":170437187207168},{"value":0},{"value":170437187207168},{"value":32},{"value":0},{"value":18446744073709550527},{"value":39683},{"value":0},{"value":1},{"value":39683},{"value":0},{"value":2043},{"value":4091773114},{"value":18446744073709551569},{"value":8462295880},{"value":0},{"value":0},{"value":32},{"value":170437187207168},{"value":0},{"value":170437187207168},{"value":6417952048},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":6417951392},"sp":{"value":6417951312},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902696,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945640,"name":"Chrome_IOThread","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553136859776},{"value":4},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":9223372036854775809},{"value":6344743552},{"value":44291},{"value":1},{"value":1},{"value":369},{"value":6426374144},{"value":0},{"value":6368226976},{"value":6368146208},{"value":6426373440},{"value":0},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6234504104},"cpsr":{"value":1610616832},"fp":{"value":6426373424},"sp":{"value":6426373328},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547448140},"far":{"value":0}},"frames":[{"imageOffset":53580,"symbol":"kevent64","symbolLocation":8,"imageIndex":156},{"imageOffset":71187368,"imageIndex":94},{"imageOffset":71186848,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":45328188,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945641,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":273791280218112},{"value":0},{"value":273791280218112},{"value":32},{"value":0},{"value":18446744073709550527},{"value":63747},{"value":0},{"value":1},{"value":63747},{"value":64003},{"value":1},{"value":1},{"value":18446744073709551569},{"value":6434795520},{"value":0},{"value":0},{"value":32},{"value":273791280218112},{"value":0},{"value":273791280218112},{"value":6434794560},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":6434793904},"sp":{"value":6434793824},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945642,"name":"ThreadPoolForegroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":270527105073152},{"value":0},{"value":270527105073152},{"value":32},{"value":0},{"value":18446744073709550527},{"value":62987},{"value":0},{"value":1},{"value":62987},{"value":0},{"value":2043},{"value":2724814918},{"value":18446744073709551569},{"value":8462295880},{"value":0},{"value":0},{"value":32},{"value":270527105073152},{"value":0},{"value":270527105073152},{"value":12893302064},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12893301408},"sp":{"value":12893301328},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902644,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945643,"name":"ThreadPoolForegroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":269393233707008},{"value":0},{"value":269393233707008},{"value":32},{"value":0},{"value":18446744073709550527},{"value":62723},{"value":0},{"value":1},{"value":62723},{"value":0},{"value":2043},{"value":3709952142},{"value":18446744073709551569},{"value":8462295880},{"value":0},{"value":0},{"value":32},{"value":269393233707008},{"value":0},{"value":269393233707008},{"value":12901723440},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12901722784},"sp":{"value":12901722704},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902644,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945644,"name":"ThreadPoolForegroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":201223512784896},{"value":0},{"value":201223512784896},{"value":32},{"value":0},{"value":18446744073709550527},{"value":46851},{"value":0},{"value":1},{"value":46851},{"value":2045},{"value":2653102232},{"value":152},{"value":18446744073709551569},{"value":204800},{"value":0},{"value":0},{"value":32},{"value":201223512784896},{"value":0},{"value":201223512784896},{"value":12910144816},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12910144160},"sp":{"value":12910144080},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902644,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945645,"name":"Chrome_InProcGpuThread","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":261696652312576},{"value":0},{"value":261696652312576},{"value":32},{"value":0},{"value":18446744073709550527},{"value":60931},{"value":0},{"value":1},{"value":60931},{"value":47619},{"value":1},{"value":1},{"value":18446744073709551569},{"value":12918566912},{"value":0},{"value":0},{"value":32},{"value":261696652312576},{"value":0},{"value":261696652312576},{"value":12918565952},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12918565296},"sp":{"value":12918565216},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945646,"name":"Chrome_ChildIOThread","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553157245472},{"value":1},{"value":0},{"value":0},{"value":12926985952},{"value":0},{"value":0},{"value":1},{"value":14293651164418},{"value":6344743648},{"value":48387},{"value":1},{"value":1},{"value":369},{"value":12926988288},{"value":0},{"value":6366333152},{"value":6364765440},{"value":12926987584},{"value":0},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6234504104},"cpsr":{"value":2684358656},"fp":{"value":12926987568},"sp":{"value":12926987472},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547448140},"far":{"value":0}},"frames":[{"imageOffset":53580,"symbol":"kevent64","symbolLocation":8,"imageIndex":156},{"imageOffset":71187368,"imageIndex":94},{"imageOffset":71186848,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":114048632,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945647,"name":"CompositorTileWorker1","threadState":{"x":[{"value":260},{"value":0},{"value":768},{"value":0},{"value":0},{"value":161},{"value":0},{"value":0},{"value":12935409224},{"value":0},{"value":4516050608},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4516050584},{"value":4516050712},{"value":12935409888},{"value":0},{"value":0},{"value":768},{"value":769},{"value":1024},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":12935409344},"sp":{"value":12935409200},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}},"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":71055056,"imageIndex":94},{"imageOffset":104344336,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945648,"name":"ThreadPoolSingleThreadSharedForeground0","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":214417652318208},{"value":0},{"value":214417652318208},{"value":32},{"value":0},{"value":18446744073709550527},{"value":49923},{"value":0},{"value":1},{"value":49923},{"value":2045},{"value":2187995152},{"value":16},{"value":18446744073709551569},{"value":665600},{"value":0},{"value":0},{"value":32},{"value":214417652318208},{"value":0},{"value":214417652318208},{"value":12943830320},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12943829664},"sp":{"value":12943829584},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70903324,"imageIndex":94},{"imageOffset":70902728,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945650,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":221014722084864},{"value":0},{"value":221014722084864},{"value":32},{"value":0},{"value":18446744073709550527},{"value":51459},{"value":0},{"value":1},{"value":51459},{"value":58883},{"value":1},{"value":1},{"value":18446744073709551569},{"value":12960002048},{"value":0},{"value":0},{"value":32},{"value":221014722084864},{"value":0},{"value":221014722084864},{"value":12960001088},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12960000432},"sp":{"value":12960000352},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945651,"name":"VizCompositorThread","threadState":{"x":[{"value":268451845},{"value":17179869442},{"value":0},{"value":247403001151488},{"value":0},{"value":247403001151488},{"value":32},{"value":16},{"value":18446744073709550527},{"value":57603},{"value":0},{"value":1},{"value":57603},{"value":52483},{"value":1},{"value":1},{"value":18446744073709551569},{"value":12968423424},{"value":0},{"value":16},{"value":32},{"value":247403001151488},{"value":0},{"value":247403001151488},{"value":12968422480},{"value":0},{"value":17179870466},{"value":17179869442},{"value":1282}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12968421824},"sp":{"value":12968421744},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70343392,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945652,"name":"NetworkService","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553130081280},{"value":2},{"value":0},{"value":0},{"value":12985575184},{"value":0},{"value":0},{"value":9223372036854775807},{"value":185477246250},{"value":6344743840},{"value":53251},{"value":1},{"value":1},{"value":369},{"value":12985577472},{"value":0},{"value":6366498176},{"value":6368579216},{"value":12985576816},{"value":0},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6234504104},"cpsr":{"value":2684358656},"fp":{"value":12985576800},"sp":{"value":12985576704},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547448140},"far":{"value":0}},"frames":[{"imageOffset":53580,"symbol":"kevent64","symbolLocation":8,"imageIndex":156},{"imageOffset":71187368,"imageIndex":94},{"imageOffset":71186848,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945653,"name":"NetworkNotificationThreadMac","threadState":{"x":[{"value":268451845},{"value":21592279046},{"value":8589934592},{"value":240805931384832},{"value":0},{"value":240805931384832},{"value":2},{"value":4294967295},{"value":18446744073709550527},{"value":56067},{"value":0},{"value":1},{"value":56067},{"value":134836},{"value":0},{"value":10995116277760},{"value":18446744073709551569},{"value":8462277376},{"value":0},{"value":4294967295},{"value":2},{"value":240805931384832},{"value":0},{"value":240805931384832},{"value":12993994200},{"value":8589934592},{"value":21592279046},{"value":21592279046},{"value":4412409862}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12993994048},"sp":{"value":12993993968},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":517760,"symbol":"__CFRunLoopServiceMachPort","symbolLocation":160,"imageIndex":163},{"imageOffset":511812,"symbol":"__CFRunLoopRun","symbolLocation":1208,"imageIndex":163},{"imageOffset":508980,"symbol":"CFRunLoopRunSpecific","symbolLocation":608,"imageIndex":163},{"imageOffset":375432,"symbol":"-[NSRunLoop(NSRunLoop) runMode:beforeDate:]","symbolLocation":212,"imageIndex":164},{"imageOffset":71382916,"imageIndex":94},{"imageOffset":71377136,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945654,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":236407884873728},{"value":0},{"value":236407884873728},{"value":32},{"value":0},{"value":18446744073709550527},{"value":55043},{"value":0},{"value":1},{"value":55043},{"value":55299},{"value":1},{"value":1},{"value":18446744073709551569},{"value":13002420224},{"value":0},{"value":0},{"value":32},{"value":236407884873728},{"value":0},{"value":236407884873728},{"value":13002419264},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13002418608},"sp":{"value":13002418528},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945655,"name":"ThreadPoolSingleThreadForegroundBlocking1","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":284786396495872},{"value":0},{"value":284786396495872},{"value":32},{"value":0},{"value":18446744073709550527},{"value":66307},{"value":0},{"value":1},{"value":66307},{"value":0},{"value":2393039166},{"value":318},{"value":18446744073709551569},{"value":12969593344},{"value":0},{"value":0},{"value":32},{"value":284786396495872},{"value":0},{"value":284786396495872},{"value":13010840880},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13010840224},"sp":{"value":13010840144},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902712,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945673,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":308975652306944},{"value":0},{"value":308975652306944},{"value":32},{"value":0},{"value":18446744073709550527},{"value":71939},{"value":0},{"value":1},{"value":71939},{"value":71683},{"value":1},{"value":1},{"value":18446744073709551569},{"value":13243592704},{"value":0},{"value":0},{"value":32},{"value":308975652306944},{"value":0},{"value":308975652306944},{"value":13243591744},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13243591088},"sp":{"value":13243591008},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945689,"name":"ThreadPoolBackgroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":513484815073280},{"value":0},{"value":513484815073280},{"value":32},{"value":0},{"value":18446744073709550527},{"value":119555},{"value":0},{"value":1},{"value":119555},{"value":2045},{"value":3594975410},{"value":178},{"value":18446744073709551569},{"value":4431407616},{"value":0},{"value":0},{"value":32},{"value":513484815073280},{"value":0},{"value":513484815073280},{"value":13474344240},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13474343584},"sp":{"value":13474343504},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70903324,"imageIndex":94},{"imageOffset":70902696,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945698,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":176128},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13547302600},{"value":0},{"value":4473610280,"symbolLocation":40,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610256,"symbolLocation":16,"symbol":"thread_status"},{"value":4473610320,"symbolLocation":80,"symbol":"thread_status"},{"value":13547303136},{"value":0},{"value":0},{"value":176128},{"value":176129},{"value":176384},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13547302720},"sp":{"value":13547302576},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945699,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":175872},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13547876040},{"value":0},{"value":4473610408,"symbolLocation":168,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610384,"symbolLocation":144,"symbol":"thread_status"},{"value":4473610448,"symbolLocation":208,"symbol":"thread_status"},{"value":13547876576},{"value":0},{"value":0},{"value":175872},{"value":175873},{"value":176128},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13547876160},"sp":{"value":13547876016},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945700,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13548449480},{"value":0},{"value":4473610536,"symbolLocation":296,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610512,"symbolLocation":272,"symbol":"thread_status"},{"value":4473610576,"symbolLocation":336,"symbol":"thread_status"},{"value":13548450016},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13548449600},"sp":{"value":13548449456},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945701,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13549022920},{"value":0},{"value":4473610664,"symbolLocation":424,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610640,"symbolLocation":400,"symbol":"thread_status"},{"value":4473610704,"symbolLocation":464,"symbol":"thread_status"},{"value":13549023456},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13549023040},"sp":{"value":13549022896},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945702,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13549596360},{"value":0},{"value":4473610792,"symbolLocation":552,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610768,"symbolLocation":528,"symbol":"thread_status"},{"value":4473610832,"symbolLocation":592,"symbol":"thread_status"},{"value":13549596896},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13549596480},"sp":{"value":13549596336},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945703,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13550169800},{"value":0},{"value":4473610920,"symbolLocation":680,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610896,"symbolLocation":656,"symbol":"thread_status"},{"value":4473610960,"symbolLocation":720,"symbol":"thread_status"},{"value":13550170336},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13550169920},"sp":{"value":13550169776},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945704,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13550743240},{"value":0},{"value":4473611048,"symbolLocation":808,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473611024,"symbolLocation":784,"symbol":"thread_status"},{"value":4473611088,"symbolLocation":848,"symbol":"thread_status"},{"value":13550743776},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13550743360},"sp":{"value":13550743216},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945705,"name":"com.apple.NSEventThread","threadState":{"x":[{"value":268451845},{"value":17183031299},{"value":103079220499},{"value":479399954631683},{"value":125915556216832},{"value":479399954612224},{"value":64},{"value":0},{"value":18446744073709550527},{"value":111619},{"value":29317},{"value":1},{"value":111619},{"value":0},{"value":0},{"value":193514046488576},{"value":18446744073709551569},{"value":8462277376},{"value":0},{"value":0},{"value":64},{"value":479399954612224},{"value":125915556216832},{"value":479399954631683},{"value":13373377984},{"value":103079220499},{"value":17183031299},{"value":17183031299},{"value":3162115}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":536875008},"fp":{"value":13373377568},"sp":{"value":13373377488},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":37900,"symbol":"CGSSnarfAndDispatchDatagrams","symbolLocation":160,"imageIndex":165},{"imageOffset":3819940,"symbol":"SLSGetNextEventRecordInternal","symbolLocation":340,"imageIndex":165},{"imageOffset":1306924,"symbol":"SLEventCreateNextEvent","symbolLocation":16,"imageIndex":165},{"imageOffset":255584,"symbol":"PullEventsFromWindowServerOnConnection(unsigned int, unsigned char, __CFMachPortBoost*)","symbolLocation":64,"imageIndex":166},{"imageOffset":255460,"symbol":"MessageHandler(__CFMachPort*, void*, long, void*)","symbolLocation":60,"imageIndex":166},{"imageOffset":712596,"symbol":"__CFMachPortPerform","symbolLocation":248,"imageIndex":163},{"imageOffset":518764,"symbol":"__CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE1_PERFORM_FUNCTION__","symbolLocation":60,"imageIndex":163},{"imageOffset":518540,"symbol":"__CFRunLoopDoSource1","symbolLocation":524,"imageIndex":163},{"imageOffset":512848,"symbol":"__CFRunLoopRun","symbolLocation":2244,"imageIndex":163},{"imageOffset":508980,"symbol":"CFRunLoopRunSpecific","symbolLocation":608,"imageIndex":163},{"imageOffset":1458568,"symbol":"_NSEventThread","symbolLocation":144,"imageIndex":160},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945706,"name":"MemoryInfra","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":448613629034496},{"value":0},{"value":448613629034496},{"value":32},{"value":0},{"value":18446744073709550527},{"value":104451},{"value":0},{"value":1},{"value":104451},{"value":104195},{"value":1},{"value":1},{"value":18446744073709551569},{"value":13384036352},{"value":0},{"value":0},{"value":32},{"value":448613629034496},{"value":0},{"value":448613629034496},{"value":13384035392},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13384034736},"sp":{"value":13384034656},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945707,"name":"ThreadPoolSingleThreadSharedBackgroundBlocking2","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":467305326706688},{"value":0},{"value":467305326706688},{"value":32},{"value":0},{"value":18446744073709550527},{"value":108803},{"value":0},{"value":1},{"value":108803},{"value":2045},{"value":3527829731},{"value":227},{"value":18446744073709551569},{"value":419840},{"value":0},{"value":0},{"value":32},{"value":467305326706688},{"value":0},{"value":467305326706688},{"value":13482765616},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13482764960},"sp":{"value":13482764880},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70903324,"imageIndex":94},{"imageOffset":70902760,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":2542790,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":157}],"threadState":{"x":[{"value":13327577088},{"value":146487},{"value":13327040512},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":13327577088},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547643680},"far":{"value":0}}},{"id":2545372,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":157}],"threadState":{"x":[{"value":13324103680},{"value":93191},{"value":13323567104},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":13324103680},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547643680},"far":{"value":0}}},{"id":2545373,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":157}],"threadState":{"x":[{"value":13327003648},{"value":0},{"value":13326467072},{"value":0},{"value":278532},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":13327003648},"esr":{"value":0,"description":" Address size fault"},"pc":{"value":6547643680},"far":{"value":0}}},{"id":2545374,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":157}],"threadState":{"x":[{"value":13317943296},{"value":141103},{"value":13317406720},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":13317943296},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547643680},"far":{"value":0}}},{"id":2545410,"name":"Thread (pooled)","threadState":{"x":[{"value":260},{"value":0},{"value":63744},{"value":0},{"value":0},{"value":160},{"value":29},{"value":999998000},{"value":13353938312},{"value":0},{"value":105553123731736},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":105553123731712},{"value":105553123731776},{"value":13353939168},{"value":999998000},{"value":29},{"value":63744},{"value":63745},{"value":64000},{"value":18446744072709551616},{"value":105553180034976}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13353938432},"sp":{"value":13353938288},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}},"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":2118156,"imageIndex":111},{"imageOffset":2117824,"symbol":"QWaitCondition::wait(QMutex*, QDeadlineTimer)","symbolLocation":108,"imageIndex":111},{"imageOffset":2094896,"imageIndex":111},{"imageOffset":2063036,"imageIndex":111},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":2545411,"name":"Thread (pooled)","threadState":{"x":[{"value":260},{"value":0},{"value":49408},{"value":0},{"value":0},{"value":160},{"value":29},{"value":999998000},{"value":13354511752},{"value":0},{"value":105553123730968},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":105553123730944},{"value":105553123731008},{"value":13354512608},{"value":999998000},{"value":29},{"value":49408},{"value":49409},{"value":49664},{"value":18446744072709551616},{"value":105553180035008}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13354511872},"sp":{"value":13354511728},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}},"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":2118156,"imageIndex":111},{"imageOffset":2117824,"symbol":"QWaitCondition::wait(QMutex*, QDeadlineTimer)","symbolLocation":108,"imageIndex":111},{"imageOffset":2094896,"imageIndex":111},{"imageOffset":2063036,"imageIndex":111},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":2545412,"name":"Thread (pooled)","threadState":{"x":[{"value":260},{"value":0},{"value":58880},{"value":0},{"value":0},{"value":160},{"value":29},{"value":999998000},{"value":13362408840},{"value":0},{"value":105553123732504},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":105553123732480},{"value":105553123732544},{"value":13362409696},{"value":999998000},{"value":29},{"value":58880},{"value":58881},{"value":59136},{"value":18446744072709551616},{"value":4528979088}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13362408960},"sp":{"value":13362408816},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6547413484},"far":{"value":0}},"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":2118156,"imageIndex":111},{"imageOffset":2117824,"symbol":"QWaitCondition::wait(QMutex*, QDeadlineTimer)","symbolLocation":108,"imageIndex":111},{"imageOffset":2094896,"imageIndex":111},{"imageOffset":2063036,"imageIndex":111},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]}],
"usedImages" : [
[deleted to fit within ticket limits]
],
"sharedCache" : {
"base" : 6543179776,
"size" : 4220698624,
"uuid" : "3406ad1b-2469-30eb-9863-5dce861e6dea"
},
"vmSummary" : "ReadOnly portion of Libraries: Total=1.6G resident=0K(0%) swapped_out_or_unallocated=1.6G(100%)\nWritable regions: Total=3.6G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=3.6G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nAccelerate framework 256K 2 \nActivity Tracing 256K 1 \nCG image 1248K 46 \nCG raster data 400K 8 \nColorSync 624K 31 \nCoreAnimation 4912K 295 \nCoreGraphics 144K 9 \nCoreServices 1152K 5 \nCoreUI image data 5536K 38 \nFoundation 32K 2 \nKernel Alloc Once 32K 1 \nMALLOC 2.9G 120 \nMALLOC guard page 192K 12 \nMach message 64K 2 \nOpenGL GLSL 384K 4 \nSTACK GUARD 592K 37 \nStack 192.3M 38 \nStack Guard 56.0M 1 \nVM_ALLOCATE 358.0M 334 \nVM_ALLOCATE (reserved) 128.0M 2 reserved VM address space (unallocated)\n__AUTH 3368K 569 \n__AUTH_CONST 40.9M 823 \n__CTF 824 1 \n__DATA 26.1M 973 \n__DATA_CONST 51.9M 986 \n__DATA_DIRTY 2901K 323 \n__FONT_DATA 2352 1 \n__GLSLBUILTINS 5174K 1 \n__INFO_FILTER 8 1 \n__LINKEDIT 563.3M 157 \n__OBJC_RO 71.9M 1 \n__OBJC_RW 2199K 1 \n__TEXT 1.1G 1004 \ndyld private memory 320K 4 \nmapped file 536.8M 82 \nshared memory 3136K 22 \n=========== ======= ======= \nTOTAL 6.0G 5937 \nTOTAL, minus reserved VM space 5.9G 5937 \n",
"legacyInfo" : {
"threadTriggered" : {
"name" : "CrBrowserMain",
"queue" : "com.apple.main-thread"
}
},
"logWritingSignature" : "ce87754ee6e0f37f36c310b91bcfc2934b937bc2",
"trialInfo" : {
"rollouts" : [
{
"rolloutId" : "5ffde50ce2aacd000d47a95f",
"factorPackIds" : {
},
"deploymentId" : 240000454
},
{
"rolloutId" : "639124e81d92412bfb4880b3",
"factorPackIds" : {
},
"deploymentId" : 240000012
}
],
"experiments" : [
]
}
}
===== Log before crash start =====
UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession.cxs
Log from Fri Jan 24 15:51:19 2025UCSF ChimeraX version: 1.9rc202412032254
(2024-12-03)
© 2016-2024 Regents of the University of California. All rights reserved.
> open /Users/gozorows/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/TSRI/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#1.cxs
Log from Fri Jan 24 13:21:31 2025 Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
Chain information for Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1
---
Chain | Description
A | No description available
B | No description available
C | No description available
H | No description available
L | No description available
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q12BBM-069_BG505_P455_J2029_C1_3.3.mrc
Opened Q12BBM-069_BG505_P455_J2029_C1_3.3.mrc as #2, grid size 400,400,400,
pixel 1.03, shown at level 0.0501, step 2, values float32
> close #2
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb
Chain information for Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2
---
Chain | Description
A | No description available
B | No description available
C | No description available
H | No description available
L | No description available
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb
Chain information for Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3
---
Chain | Description
A | No description available
B | No description available
C | No description available
H | No description available
L | No description available
> open 7T77 fromDatabase pdb format mmcif
7t77 title:
HIV-1 Envelope ApexGT3.N130 in complex with PG9 Fab [more info...]
Chain information for 7t77 #4
---
Chain | Description
A C E | HIV Envelope ApexGT3.N130 gp120
B D F | HIV Envelope ApexGT3.N130 gp41
H | PG9 Fab Heavy Chain
L | PG9 Fab Light Chain
Non-standard residues in 7t77 #4
---
BMA — beta-D-mannopyranose (beta-D-mannose; D-mannose; mannose)
MAN — alpha-D-mannopyranose (alpha-D-mannose; D-mannose; mannose)
NAG — 2-acetamido-2-deoxy-beta-D-glucopyranose (N-acetyl-beta-D-glucosamine;
2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose;
2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE)
> hide atoms
> show cartoons
> ui tool show Matchmaker
> matchmaker #!2-4 to #1/H pairing bs
Computing secondary structure
[Repeated 3 time(s)] Parameters
---
Chain pairing | bs
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain H (#2), sequence
alignment score = 434.3
RMSD between 115 pruned atom pairs is 0.673 angstroms; (across all 127 pairs:
1.856)
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain H (#3), sequence
alignment score = 441.6
RMSD between 111 pruned atom pairs is 0.642 angstroms; (across all 127 pairs:
1.946)
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with
7t77, chain H (#4), sequence alignment score = 299.2
RMSD between 104 pruned atom pairs is 0.956 angstroms; (across all 123 pairs:
2.666)
> hide #!3 models
> hide #!2 models
> hide #!1 models
> show #!3 models
> hide #!3 models
> hide #!4 models
> show #!3 models
> show #!2 models
> show #!1 models
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc
> lighting soft
> hide atoms
> set bgColor #ffffff00
> graphics silhouettes true width 1.5
> camera ortho
> setattr g display false
Assigning display attribute to 4 items
> cartoon style width 1 thickness 1
> cartoon suppressBackboneDisplay true
> show cartoons
> style stick
Changed 65146 atom styles
> color #1/L #b188a7
> color #1/H #6a64a5
> color /C tan
> color #1/B #72a27e
> color #1/A #a7a7a7
> color :NAG,NAM,BMA,MAN blue
executed base_coloring.cxc
> hide #!3 models
> hide #!2 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!1 models
> show #!1 models
> hide #!4 models
> ui tool show Matchmaker
> matchmaker #4/E to #1/B pairing ss
Computing secondary structure
[Repeated 1 time(s)] Parameters
---
Chain pairing | ss
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain B (#1) with
7t77, chain E (#4), sequence alignment score = 1812.7
RMSD between 395 pruned atom pairs is 0.868 angstroms; (across all 442 pairs:
1.619)
> show #!4 models
> matchmaker #!1-3 to #4/E pairing bs
Computing secondary structure
[Repeated 3 time(s)] Parameters
---
Chain pairing | bs
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker 7t77, chain E (#4) with
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain C (#1), sequence
alignment score = 1853.8
RMSD between 388 pruned atom pairs is 0.920 angstroms; (across all 442 pairs:
1.596)
Matchmaker 7t77, chain E (#4) with
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain C (#2), sequence
alignment score = 1972.2
RMSD between 396 pruned atom pairs is 0.857 angstroms; (across all 433 pairs:
1.202)
Matchmaker 7t77, chain E (#4) with
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain B (#3), sequence
alignment score = 1924.9
RMSD between 394 pruned atom pairs is 0.930 angstroms; (across all 425 pairs:
1.266)
> matchmaker #!2-3 to #1/H pairing bs
Computing secondary structure
[Repeated 2 time(s)] Parameters
---
Chain pairing | bs
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain H (#2), sequence
alignment score = 434.3
RMSD between 115 pruned atom pairs is 0.673 angstroms; (across all 127 pairs:
1.856)
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain H (#3), sequence
alignment score = 441.6
RMSD between 111 pruned atom pairs is 0.642 angstroms; (across all 127 pairs:
1.946)
> matchmaker #4/E to #1/B pairing ss
Computing secondary structure
[Repeated 1 time(s)] Parameters
---
Chain pairing | ss
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain B (#1) with
7t77, chain E (#4), sequence alignment score = 1812.7
RMSD between 395 pruned atom pairs is 0.868 angstroms; (across all 442 pairs:
1.619)
> hide #!4 models
> ui tool show "Side View"
> select #1 /H:64,32,58,199J
25 atoms, 22 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /H:64,32,58,100J
33 atoms, 29 bonds, 4 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /H
998 atoms, 1023 bonds, 127 residues, 1 model selected
> hide sel atoms
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J
68 atoms, 68 bonds, 7 residues, 1 model selected
> show sel atoms
> color sel byhetero
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /L
863 atoms, 886 bonds, 110 residues, 1 model selected
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> show sel atoms
> select clear
> color #!1 byhetero
> select #B :158-196
Expected an objects specifier or a keyword
> select #1 /B :158-196
340 atoms, 345 bonds, 40 residues, 1 model selected
> select clear
> select #1 /H :31, 100B
22 atoms, 21 bonds, 2 residues, 1 model selected
> select #1 /H :31, 100B #1 /C :185, 169
41 atoms, 38 bonds, 4 residues, 1 model selected
> show sel atoms
> select #1 /H :100B #1 /A :160, 169
35 atoms, 33 bonds, 3 residues, 1 model selected
> hide sel atoms
> show sel atoms
> select clear
> ui tool show Distances
Exactly two atoms must be selected!
> select #1/A:169@NH1
1 atom, 1 residue, 1 model selected
> select #1/H:100B@O2
1 atom, 1 residue, 1 model selected
> select #1/A:169@NH1
1 atom, 1 residue, 1 model selected
> select add #1/H:100B@O2
2 atoms, 2 residues, 1 model selected
> distance #1/A:169@NH1 #1/H:100B@O2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ARG 169
NH1 and /H TYS 100B O2: 3.318Å
> select add #1/A:160@ND2
3 atoms, 3 residues, 1 model selected
> select subtract #1/H:100B@O2
2 atoms, 2 residues, 1 model selected
> distance #1/A:169@NH1 #1/A:160@ND2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ARG 169
NH1 and ASN 160 ND2: 3.304Å
> ~distance #1/A:169@NH1 #1/A:160@ND2
> select clear
> select #1/A:160@ND2
1 atom, 1 residue, 1 model selected
> select add #1/H:100B@O2
2 atoms, 2 residues, 1 model selected
> distance #1/A:160@ND2 #1/H:100B@O2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160
ND2 and /H TYS 100B O2: 3.314Å
> select subtract #1/H:100B
1 atom, 1 residue, 1 model selected
> select add #1/C:169@NH1
2 atoms, 2 residues, 1 model selected
> distance #1/A:160@ND2 #1/C:169@NH1
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160
ND2 and /C ARG 169 NH1: 14.345Å
> ~distance #1/A:160@ND2 #1/C:169@NH1
> select clear
> select add #1/H:100B
16 atoms, 16 bonds, 1 residue, 1 model selected
> select add #1/C:169@NH1
17 atoms, 16 bonds, 2 residues, 1 model selected
Exactly two atoms must be selected!
> select #1 /H :100B O #1 /C :169 NH1
Expected a keyword
> select #1 /H :100B O, #1 /C :169 NH1
Expected a keyword
> select #1 /H :100B O
Expected a keyword
> select #1 /H :100B @O
1 atom, 1 residue, 1 model selected
> select #1 /H :100B @O #1 /C :169 @NH1
2 atoms, 2 residues, 1 model selected
> distance #1/H:100B@O #1/C:169@NH1
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS
100B O and /C ARG 169 NH1: 2.954Å
> select clear
> hide #5.1 models
> show #!1 atoms
> hide #!1 atoms
> select #1 /H :31, 100B #1 /C :185, 169
41 atoms, 38 bonds, 1 pseudobond, 4 residues, 2 models selected
> show sel atoms
> select up
232 atoms, 234 bonds, 1 pseudobond, 28 residues, 2 models selected
> select up
4916 atoms, 5055 bonds, 1 pseudobond, 603 residues, 2 models selected
> select up
4935 atoms, 5074 bonds, 1 pseudobond, 605 residues, 2 models selected
> select clear
> select #1 /H :100B #1 /A :160, 169
35 atoms, 33 bonds, 2 pseudobonds, 3 residues, 2 models selected
> show sel atoms
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J
68 atoms, 68 bonds, 7 residues, 1 model selected
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> select clear
> select down
Nothing selected
> select down
Nothing selected
> select #1 /C :166
11 atoms, 10 bonds, 1 residue, 1 model selected
> show sel atoms
> select clear
> select #1 /C :166
11 atoms, 10 bonds, 1 residue, 1 model selected
> select clear
> select #1 /A :166
11 atoms, 10 bonds, 1 residue, 1 model selected
> select #1 :166
33 atoms, 30 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> select #1 :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> select clear
> select #1 :169
33 atoms, 30 bonds, 3 residues, 1 model selected
> select clear
> select ~sel & ##selected
Nothing selected
> select #1 :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> select clear
> view clip false
[Repeated 1 time(s)]
> view name TYR100B
> view list
Named views: TYR100B
> view TYR100B
[Repeated 1 time(s)]
Unsupported scale factor (0.000000) detected on Display0
[Repeated 1 time(s)]
QPainter::begin: Paint device returned engine == 0, type: 2
QPainter::translate: Painter not active
QPainter::setPen: Painter not active
QPainter::setBrush: Painter not active
QPainter::drawPoints: Painter not active
QPainter::end: Painter not active, aborted
QPainter::begin: Paint device returned engine == 0, type: 2
QPainter::translate: Painter not active
QPainter::setPen: Painter not active
QPainter::setBrush: Painter not active
QPainter::drawPoints: Painter not active
QPainter::end: Painter not active, aborted
Unsupported scale factor (0.000000) detected on Display0
[Repeated 4 time(s)]
> view TYR100B
[Repeated 1 time(s)]
> view name TYR100B
> view TYR100B
> save /Users/sphulera/Desktop/image46.png supersample 3
> save /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3.cxs
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> select add #2
15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected
> show sel atoms
> color (#!2 & sel) byhetero
> select clear
> show #!1 models
> hide #!2 models
> show #!2 models
> color #2 /L #b188a7
> color #2 /H #6a64a5
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc
> lighting soft
> hide atoms
> set bgColor #ffffff00
> graphics silhouettes true width 1.5
> camera ortho
> setattr g display false
Assigning display attribute to 5 items
> cartoon style width 1 thickness 1
> cartoon suppressBackboneDisplay true
> show cartoons
> style stick
Changed 65146 atom styles
> color #1/L #b188a7
> color #1/H #6a64a5
> color /C tan
> color #1/B #72a27e
> color #1/A #a7a7a7
> color :NAG,NAM,BMA,MAN blue
executed base_coloring.cxc
> hide #!2 models
> show #!2 models
> hide #!1 models
> open /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc
> lighting soft
> hide atoms
> set bgColor #ffffff00
> graphics silhouettes true width 1.5
> camera ortho
> setattr g display false
Assigning display attribute to 5 items
> cartoon style width 1 thickness 1
> cartoon suppressBackboneDisplay true
> show cartoons
> style stick
Changed 65146 atom styles
> color /L #b188a7
> color /H #6a64a5
> color /C tan
> color /B #72a27e
> color /A #a7a7a7
> color :NAG,NAM,BMA,MAN blue
executed base_coloring.cxc
> show #!1 models
> show #!3 models
> hide #!3 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> view TYR100B
> select add #2
15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected
> show sel atoms
> color (#!2 & sel) byelement
> select clear
> color :NAG, NAM, BMA blue
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> hide #!2 atoms
> show #!1 models
> hide #!2 models
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> show sel atoms
> color sel byhetero
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> select #1 /H :100B #1 /A :160, 169
35 atoms, 33 bonds, 2 pseudobonds, 3 residues, 2 models selected
> show sel atoms
> color (#!1 & sel) byhetero
> show #!5 models
> select #1 /H :31, 100B #1 /C :185, 169
41 atoms, 38 bonds, 1 pseudobond, 4 residues, 2 models selected
> show sel atoms
> color (#!1 & sel) byelement
> select clear
> color /C tan
> color #!1,5 byhetero
> select clear
> hide #!1 models
> show #!2 models
> show #!1 models
> hide #!1 models
> show atoms #2 /H :53
Expected ',' or a keyword
> show #2 /H :53
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56
> color /H #6a64a5
> color /H byelement #6a64a5
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> color /H byelement atoms #6a64a5
Expected ',' or a keyword
> color byelement /H #6a64a5
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> color byelement /H
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> color #!2,5 byhetero
> color /H byhetero
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56 #2 /B :163,167,169,
> 170, 171, 168, 169, 171, 305
> color #2 byhetero
> select clear
> color #!2,5 byhetero
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56 #2 /B :163,167,169,
> 170, 171, 168, 169, 171, 305
> color #!2,5 byhetero
> select add #2
15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected
> color (#!2 & sel) byhetero
> select clear
> color /L #b188a7
> color /H #6a64a5
> color /C tan
> color /B #72a27e
> color /A #a7a7a7
> color #!2,5 byhetero
> view list
Named views: TYR100B
> view TYR100B
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56, 64, 100E, 100L, 58 #2
> /B :163,167,169, 170, 171, 168, 169, 171, 305, 322, 305
> distance #2 /H :100E @OD1 #2 /B :169
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or
one or more measurable objects and one or more atoms, got 10 atoms and 0
measurable objects
> distance #2 /H :100E @OD1 #2 /B :169 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
100E OD1 and /B LYS 169 NZ: 4.244Å
> distance #2 /H :100E @OD1 #2 /B :171 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
100E OD1 and /B LYS 171 NZ: 18.040Å
> ~distance #2/H:100E@OD1 #2/B:169@NZ
> distance #2 /H :100L @OD1 #2 /B :171 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
100L OD1 and /B LYS 171 NZ: 3.182Å
> ~distance #2/H:100L@OD1 #2/B:171@NZ
> ~distance #2/H:100E@OD1 #2/B:171@NZ
> distance #2 /H :100L @OD1 #2 /B :171 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
100L OD1 and /B LYS 171 NZ: 3.182Å
> distance #2 /H :100E @OD2 #2 /B :169 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
100E OD2 and /B LYS 169 NZ: 3.026Å
> distance #2 /H :58E @OD1 #2 /B :305 @NZ
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> distance #2 /H :58 @OD1 #2 /B :305 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP
58 OD1 and /B LYS 305 NZ: 3.766Å
> ~distance #1/H:100B@O #1/C:169@NH1
> distance #2 /H :58 @OD1 #2 /B :305 @NZ
Distance already exists; modify distance properties with 'distance style'
> distance #2 /H :100C @OE1 #2 /A :169 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU
100C OE1 and /A LYS 169 NZ: 3.024Å
> show #2 /H :100C #2 /A :169
> show #2 /H :100C #2 /A :169
> select clear
> select :169
120 atoms, 108 bonds, 12 residues, 4 models selected
> show sel & #!2 atoms
> select clear
> select :160
96 atoms, 84 bonds, 12 residues, 4 models selected
> list view
Unknown command: list view
> view list
Named views: TYR100B
> view TYR100B
> select clear
> save /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#2.cxs
> save /Users/sphulera/Desktop/image47.png supersample 3
> show #!1 models
> hide #!2 models
> color #!1,5 byhetero
> save /Users/sphulera/Library/CloudStorage/OneDrive-
> TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#1.cxs
——— End of log from Fri Jan 24 13:21:31 2025 ———
opened ChimeraX session
> ui tool show "Side View"
> show #!2 models
> hide #!1 models
> ui tool show H-Bonds
> hbonds reveal true
12911 hydrogen bonds found
> hbonds intraModel false intraRes false reveal true
6753 hydrogen bonds found
> select #2:MAN:NAG:BMA:FUC
971 atoms, 994 bonds, 73 residues, 1 model selected
> color sel lime
> color sel yellow
> select clear
> hide #!2 models
> show #!1 models
> select #1:MAN:NAG:BMA:FUC
1137 atoms, 1169 bonds, 84 residues, 1 model selected
> show sel atoms
> color sel yellow
> select #1/L:53
6 atoms, 5 bonds, 1 residue, 1 model selected
> select #1/B:160
8 atoms, 7 bonds, 1 residue, 1 model selected
> show sel atoms
> select clear
> select #1/C:160
8 atoms, 7 bonds, 1 residue, 1 model selected
> show sel atoms
> show #!3 models
> hide #!1 models
> select #3:MAN:NAG:BMA:FUC
877 atoms, 899 bonds, 65 residues, 1 model selected
> show sel atoms
> color sel yellow
> style sel sphere
Changed 877 atom styles
> select clear
> select #3 &~ #3:MAN:NAG:BMA:FUC
14917 atoms, 15255 bonds, 19 pseudobonds, 1896 residues, 2 models selected
> hide sel atoms
> select clear
> save "/Users/gozorows/OneDrive - The Scripps Research
> Institute/TSRI/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession.cxs"
——— End of log from Fri Jan 24 15:51:19 2025 ———
opened ChimeraX session
> show #!4 models
> hide #!3 models
> show #!3 models
> hide #!3 models
> show #!3 models
> hide #!3 models
> select :NAG, NAM, BMA
4074 atoms, 4169 bonds, 439 pseudobonds, 297 residues, 5 models selected
> style sel & #!4 sphere
Changed 1320 atom styles
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> style sel & #!4 sphere
Changed 1419 atom styles
> select clear
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> color (#!4 & sel) yellow
> select clear
> show #!3 models
> hide #!4 models
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> hide sel & #!3 atoms
> show #!4 models
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> hide sel & #!3-4 atoms
> select clear
> hide #!5 models
> hide #6 models
> hide #!3 models
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> ui tool show H-Bonds
> hbonds sel interModel false distSlop 2.0 intraMol false intraRes false
> reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb
3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb
4 7t77
273 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 135 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no hydrogen 3.432 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 135 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no hydrogen 2.973 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 136 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no hydrogen 4.422 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 155 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 720 O5 no hydrogen 4.201 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 702 O6 no hydrogen 3.176 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 208 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A MAN 736 O6 no hydrogen 3.284 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 235 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O5 no hydrogen 4.248 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 251 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O5 no hydrogen 4.381 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 294 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 O7 no hydrogen 4.181 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 307 NH1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 no hydrogen 4.612 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 307 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 no hydrogen 4.800 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 331 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O7 no hydrogen 4.787 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 362 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O4 no hydrogen 5.247 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A GLY 378 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O3 no hydrogen 4.757 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 387 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O5 no hydrogen 4.667 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 387 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O4 no hydrogen 4.738 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 412 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O7 no hydrogen 4.280 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 414 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 O5 no hydrogen 4.656 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 443 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O5 no hydrogen 2.930 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O3 no hydrogen 4.457 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O4 no hydrogen 5.614 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O5 no hydrogen 5.557 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O6 no hydrogen 5.053 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A VAL 445 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O4 no hydrogen 4.483 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A VAL 445 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O7 no hydrogen 3.947 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 612 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 741 O6 no hydrogen 3.240 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 702 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 160 OD1 no hydrogen 4.772 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A HIS 329 NE2 no hydrogen 3.156 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 726 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 740 O7 no hydrogen 3.585 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASP 321 OD1 no hydrogen 5.115 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASP 321 OD2 no hydrogen 4.393 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 235 O no hydrogen 4.514 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A PRO 237 O no hydrogen 5.107 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 446 OG no hydrogen 3.566 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A GLU 210 OE2 no hydrogen 3.983 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A MAN 736 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 208 OG no hydrogen 3.284 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 363 O no hydrogen 3.898 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O7 no hydrogen 4.530 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O7 no hydrogen 4.653 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 741 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 612 OG no hydrogen 3.240 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O7 no hydrogen 4.081 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 151 NE Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O7 no hydrogen 4.097 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 151 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O7 no hydrogen 4.741 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B TYR 173 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 no hydrogen 4.764 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 189 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 721 O3 no hydrogen 4.564 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 234 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 N2 no hydrogen 4.440 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 236 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 O5 no hydrogen 4.564 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 295 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no hydrogen 4.211 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ILE 323 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 no hydrogen 3.934 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 332 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O7 no hydrogen 4.451 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 388 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O6 no hydrogen 3.244 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O7 no hydrogen 4.058 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O5 no hydrogen 4.964 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 415 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O5 no hydrogen 4.375 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NE Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no hydrogen 4.034 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O5 no hydrogen 4.253 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O5 no hydrogen 2.957 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no hydrogen 3.647 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O3 no hydrogen 3.751 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O5 no hydrogen 4.891 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O6 no hydrogen 4.186 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B VAL 446 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O4 no hydrogen 4.465 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B VAL 446 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O7 no hydrogen 4.864 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH no hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 197 O no hydrogen 5.021 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 197 OD1 no hydrogen 4.555 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 293 OE1 no hydrogen 3.241 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B HIS 330 NE2 no hydrogen 3.205 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 721 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLY 152 O no hydrogen 4.951 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 262 OD1 no hydrogen 3.220 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 448 OD1 no hydrogen 4.270 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O5 no hydrogen 4.061 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 O no hydrogen 3.666 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 135 O no hydrogen 3.559 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B TYR 173 OH no hydrogen 4.764 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLY 321 O no hydrogen 4.744 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ILE 323 O no hydrogen 4.949 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 OD1 no hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 744 O3 no hydrogen 4.646 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG no hydrogen 2.808 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 OD1 no hydrogen 3.166 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 O no hydrogen 3.729 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 236 O no hydrogen 4.343 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 377 O no hydrogen 4.977 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLU 211 OE2 no hydrogen 4.991 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 O no hydrogen 5.042 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B BMA 738 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLU 211 OE1 no hydrogen 5.142 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O7 no hydrogen 3.107 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 no hydrogen 3.587 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 388 OG no hydrogen 3.244 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 no hydrogen 4.497 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O3 no hydrogen 3.587 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O5 no hydrogen 4.659 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O6 no hydrogen 4.497 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O5 no hydrogen 4.243 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 744 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O3 no hydrogen 4.646 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B BMA 746 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 748 O5 no hydrogen 4.487 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 747 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 46 OE1 no hydrogen 5.126 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 130 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O7 no hydrogen 4.559 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 158 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O6 no hydrogen 4.213 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 198 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O5 no hydrogen 4.689 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C LYS 252 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O5 no hydrogen 4.833 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 279 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 738 O5 no hydrogen 3.820 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 295 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O7 no hydrogen 4.723 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 332 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O7 no hydrogen 4.455 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 363 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 O4 no hydrogen 4.375 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLY 379 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3 no hydrogen 4.978 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O7 no hydrogen 4.765 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 741 O5 no hydrogen 3.388 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O7 no hydrogen 4.399 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O5 no hydrogen 5.001 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 415 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O6 no hydrogen 4.524 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ARG 444 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O6 no hydrogen 2.905 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C VAL 446 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O4 no hydrogen 4.178 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 160 OD1 no hydrogen 4.753 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE1 no hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.183 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 197 O no hydrogen 4.730 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 197 OD1 no hydrogen 4.557 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 293 OE1 no hydrogen 3.282 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 415 OG1 no hydrogen 4.524 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6 no hydrogen 4.963 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 729 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 88 OD1 no hydrogen 2.881 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASP 322 OD2 no hydrogen 4.764 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 743 O5 no hydrogen 2.989 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 743 O7 no hydrogen 2.443 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 158 OG no hydrogen 4.213 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.370 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no hydrogen 3.602 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no hydrogen 2.872 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2 no hydrogen 4.039 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no hydrogen 4.666 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O6 no hydrogen 4.352 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 3.794 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no hydrogen 2.884 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 no hydrogen 4.039 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 4.323 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 2.931 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 2.870 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ILE 97 O no hydrogen 3.751 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 101 OD2 no hydrogen 4.400 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 4.837 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 no hydrogen 4.352 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 734 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 236 OG1 no hydrogen 4.864 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE2 no hydrogen 3.916 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 377 O no hydrogen 4.413 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE1 no hydrogen 4.145 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE2 no hydrogen 4.790 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 736 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ARG 444 O no hydrogen 4.469 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG no hydrogen 4.447 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 364 O no hydrogen 3.722 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O3 no hydrogen 4.963 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O7 no hydrogen 5.150 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2 no hydrogen 4.370 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H VAL 2 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 no hydrogen 4.774 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 3.307 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 no hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O5 no hydrogen 4.887 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 no hydrogen 3.632 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 no hydrogen 4.886 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O6 no hydrogen 3.786 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O4 no hydrogen 3.574 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O5 no hydrogen 4.918 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 4.514 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 52 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O6 no hydrogen 4.679 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 no hydrogen 3.017 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O5 no hydrogen 4.351 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 N2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C ASP 167 OD2 no hydrogen 4.725 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no hydrogen 4.914 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE2 no hydrogen 4.749 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ASP 167 OD2 no hydrogen 4.751 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH no hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 OD1 no hydrogen 2.873 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG no hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 O no hydrogen 5.053 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 2.904 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 N2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 4.624 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH no hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.659 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 5.152 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.734 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 2.874 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 62 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O6 no hydrogen 4.891 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 98 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 no hydrogen 4.263 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O5 no hydrogen 4.369 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 no hydrogen 4.788 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 O4 no hydrogen 3.821 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 no hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 no hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 no hydrogen 3.011 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O5 no hydrogen 4.876 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 no hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 no hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 31 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 4.157 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O4 no hydrogen 3.878 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O7 no hydrogen 4.344 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 no hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.745 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O4 no hydrogen 2.941 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.593 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 67 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 3.874 N/A
7t77 #4/E ARG 308 NH1 7t77 #4/S NAG 1 O7 no hydrogen 2.971 N/A
7t77 #4/E ARG 308 NH2 7t77 #4/S NAG 1 O7 no hydrogen 3.095 N/A
7t77 #4/H SER 74 N 7t77 #4/j MAN 5 O6 no hydrogen 3.135 N/A
7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O4 no hydrogen 4.355 N/A
7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O6 no hydrogen 3.762 N/A
7t77 #4/H ARG 100B NE 7t77 #4/h NAG 1 O6 no hydrogen 2.959 N/A
7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O5 no hydrogen 3.418 N/A
7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O6 no hydrogen 2.953 N/A
7t77 #4/H ASN 100F ND2 7t77 #4/X NAG 1 O7 no hydrogen 5.183 N/A
7t77 #4/H TYR 100K OH 7t77 #4/j NAG 1 O4 no hydrogen 4.788 N/A
7t77 #4/H TYR 100K OH 7t77 #4/j NAG 2 O3 no hydrogen 4.518 N/A
7t77 #4/H ASN 100P N 7t77 #4/h MAN 5 O3 no hydrogen 4.984 N/A
7t77 #4/H ASN 100P ND2 7t77 #4/h MAN 5 O4 no hydrogen 2.860 N/A
7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O3 no hydrogen 3.359 N/A
7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O4 no hydrogen 3.351 N/A
7t77 #4/H HIS 100R NE2 7t77 #4/h MAN 5 O4 no hydrogen 3.440 N/A
7t77 #4/L SER 32 OG 7t77 #4/h MAN 6 O3 no hydrogen 2.926 N/A
7t77 #4/L SER 56 N 7t77 #4/X BMA 3 O3 no hydrogen 5.008 N/A
7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O2 no hydrogen 4.789 N/A
7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O3 no hydrogen 3.927 N/A
7t77 #4/X BMA 3 O2 7t77 #4/L SER 56 OG no hydrogen 4.789 N/A
7t77 #4/X BMA 3 O3 7t77 #4/L SER 56 OG no hydrogen 3.927 N/A
7t77 #4/X BMA 3 O4 7t77 #4/L SER 56 OG no hydrogen 4.978 N/A
7t77 #4/h NAG 1 O6 7t77 #4/H ASP 100 OD2 no hydrogen 4.044 N/A
7t77 #4/h NAG 1 O6 7t77 #4/H TYS 100G O2 no hydrogen 4.935 N/A
7t77 #4/h NAG 2 N2 7t77 #4/H ASP 100 OD2 no hydrogen 4.837 N/A
7t77 #4/h MAN 4 O2 7t77 #4/L SER 32 OG no hydrogen 3.818 N/A
7t77 #4/h MAN 5 O4 7t77 #4/H HIS 100R NE2 no hydrogen 3.440 N/A
7t77 #4/h MAN 6 O2 7t77 #4/L GLU 31 O no hydrogen 4.821 N/A
7t77 #4/h MAN 6 O3 7t77 #4/H TYR 100Q O no hydrogen 4.294 N/A
7t77 #4/h MAN 6 O3 7t77 #4/H HIS 100R ND1 no hydrogen 3.359 N/A
7t77 #4/h MAN 6 O3 7t77 #4/L SER 32 OG no hydrogen 2.926 N/A
7t77 #4/h MAN 6 O3 7t77 #4/L ASP 50 OD2 no hydrogen 3.718 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H ASN 100P O no hydrogen 3.545 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H TYR 100Q O no hydrogen 2.714 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H HIS 100R ND1 no hydrogen 3.351 N/A
7t77 #4/h MAN 6 O6 7t77 #4/H TYR 100Q O no hydrogen 4.679 N/A
7t77 #4/h MAN 6 O6 7t77 #4/L ASP 50 OD1 no hydrogen 3.389 N/A
7t77 #4/j NAG 2 N2 7t77 #4/H TYR 100K OH no hydrogen 2.783 N/A
7t77 #4/j NAG 2 O3 7t77 #4/H TYR 100K OH no hydrogen 4.518 N/A
7t77 #4/j BMA 3 O2 7t77 #4/H GLY 54 O no hydrogen 4.057 N/A
7t77 #4/j MAN 5 O2 7t77 #4/H ARG 71 O no hydrogen 5.083 N/A
7t77 #4/j MAN 5 O4 7t77 #4/H ASP 72 OD1 no hydrogen 3.091 N/A
7t77 #4/j MAN 5 O4 7t77 #4/H SER 74 OG no hydrogen 4.355 N/A
7t77 #4/j MAN 5 O6 7t77 #4/H ASP 72 OD1 no hydrogen 2.858 N/A
7t77 #4/j MAN 5 O6 7t77 #4/H SER 74 OG no hydrogen 3.762 N/A
273 hydrogen bonds found
> select clear
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> color (#!4 & sel) byhetero
> select clear
> hide #!4 models
> show #!4 models
> show #!3 models
> hide #!4 models
> show #!1 models
> hide #!3 models
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> hide sel & #!1 atoms
> hbonds sel interModel false distSlop 2.0 intraMol false intraRes false
> reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb
3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb
4 7t77
305 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O2 no hydrogen 3.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 158 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 3.190 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 no hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE2 no hydrogen 5.106 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 O no hydrogen 4.793 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 32 OD1 no hydrogen 2.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE1 no hydrogen 4.195 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E O no hydrogen 2.894 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG no hydrogen 4.810 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 NE Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100F OH no hydrogen 3.847 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD1 no hydrogen 2.460 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 3.284 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 2.527 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD2 no hydrogen 3.110 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 4.536 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG no hydrogen 4.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 189 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 O no hydrogen 3.911 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H THR 57 O no hydrogen 4.539 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 58 OD1 no hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ARG 169 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100D OH no hydrogen 3.779 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 4.851 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 4.640 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 5.017 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 2.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 33 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 170 OE1 no hydrogen 3.642 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no hydrogen 3.729 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no hydrogen 4.588 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no hydrogen 4.208 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 50 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 O no hydrogen 2.427 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.676 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.726 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASN 56 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 306 O no hydrogen 3.199 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LYS 64 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ILE 323 O no hydrogen 4.809 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.005 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.854 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 2.874 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 100H N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 4.086 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.866 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no hydrogen 2.822 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 OE1 no hydrogen 5.022 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no hydrogen 3.808 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no hydrogen 3.201 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no hydrogen 4.990 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no hydrogen 4.790 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no hydrogen 2.623 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no hydrogen 3.107 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no hydrogen 3.957 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 160 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100C OE2 no hydrogen 3.415 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 166 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD2 no hydrogen 5.159 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100C OE1 no hydrogen 3.024 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 132 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 O no hydrogen 4.886 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 27 OE1 no hydrogen 4.014 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 158 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 O no hydrogen 2.820 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 158 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 OD1 no hydrogen 2.681 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 166 NH1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD1 no hydrogen 5.030 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 168 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1 no hydrogen 3.856 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I O no hydrogen 2.892 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD1 no hydrogen 4.244 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD2 no hydrogen 3.026 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 100K OD1 no hydrogen 3.962 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100L OD1 no hydrogen 3.182 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L HIS 91 O no hydrogen 3.814 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 OD1 no hydrogen 3.567 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 OD2 no hydrogen 2.769 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 189 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 OD2 no hydrogen 4.683 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG no hydrogen 3.788 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 58 OD1 no hydrogen 3.766 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 58 OD2 no hydrogen 3.424 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG no hydrogen 4.653 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH no hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 OD1 no hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG no hydrogen 2.808 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 O no hydrogen 3.729 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 747 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 46 OE1 no hydrogen 5.126 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 185 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 30 OD1 no hydrogen 4.053 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE1 no hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.183 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.370 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 3.794 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 4.323 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 2.931 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 2.870 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ILE 97 O no hydrogen 3.751 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 101 OD2 no hydrogen 4.400 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 4.837 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H VAL 2 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 no hydrogen 4.774 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 28 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 185 O no hydrogen 2.901 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 30 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 183 O no hydrogen 4.839 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 33 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 O no hydrogen 4.901 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 33 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 170 OE1 no hydrogen 3.825 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLN 39 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 38 OE1 no hydrogen 3.146 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H LEU 45 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 99 O no hydrogen 5.079 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TRP 47 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LEU 96 O no hydrogen 4.378 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 54 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 O no hydrogen 4.552 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 O no hydrogen 4.688 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 3.307 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 no hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 O no hydrogen 2.914 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 O no hydrogen 3.475 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 OD1 no hydrogen 4.704 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 100K N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 O no hydrogen 3.356 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100M OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 O no hydrogen 2.952 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100N OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 55 OE1 no hydrogen 3.280 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100O N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 36 OH no hydrogen 3.309 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 135 O no hydrogen 3.869 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O5 no hydrogen 4.887 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 no hydrogen 3.632 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 27 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 O no hydrogen 3.797 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 30 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 OE1 no hydrogen 3.494 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 no hydrogen 4.886 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O6 no hydrogen 3.786 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 36 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100O O no hydrogen 4.364 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 38 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLN 39 OE1 no hydrogen 2.945 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O4 no hydrogen 3.574 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O5 no hydrogen 4.918 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 4.514 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH no hydrogen 3.152 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100L OD2 no hydrogen 3.175 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 52 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O6 no hydrogen 4.679 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 no hydrogen 3.017 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 OD1 no hydrogen 4.535 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O5 no hydrogen 4.351 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 89 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100M O no hydrogen 3.284 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 O no hydrogen 4.044 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 OE1 no hydrogen 4.779 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 93 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 O no hydrogen 3.603 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ASN 160 ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no hydrogen 3.857 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ARG 166 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.507 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ARG 166 NH2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.105 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100B OD2 no hydrogen 3.534 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no hydrogen 4.914 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE2 no hydrogen 4.749 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 132 OG1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L HIS 27 ND1 no hydrogen 4.383 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 158 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 O no hydrogen 2.863 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 158 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 OD1 no hydrogen 2.785 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 163 OG1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 33 OH no hydrogen 4.833 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NE Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no hydrogen 4.268 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NE Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.794 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NH2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no hydrogen 3.790 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 168 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 no hydrogen 4.296 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I O no hydrogen 2.830 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 no hydrogen 4.794 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.838 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K OD1 no hydrogen 2.984 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100L OD1 no hydrogen 2.681 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 OD1 no hydrogen 4.315 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 305 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 58 OD1 no hydrogen 3.334 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 305 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 58 OD2 no hydrogen 3.096 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG no hydrogen 3.385 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLY 55 O no hydrogen 4.656 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH no hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 OD1 no hydrogen 2.873 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG no hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 O no hydrogen 5.053 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H PHE 100D O no hydrogen 3.085 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no hydrogen 4.674 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C ASN 185 ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 28 OG no hydrogen 4.042 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 2.904 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 N2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 4.624 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH no hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.659 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 5.152 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.734 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 2.874 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TRP 47 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 96 O no hydrogen 4.180 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 50 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 4.991 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 50 NH2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 4.641 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 304 O no hydrogen 4.756 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 O no hydrogen 3.497 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 62 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O6 no hydrogen 4.891 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 98 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 no hydrogen 4.263 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O5 no hydrogen 4.369 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 no hydrogen 4.788 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 O4 no hydrogen 3.821 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 no hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 no hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ASP 167 O no hydrogen 2.790 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ASP 167 O no hydrogen 2.812 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 O no hydrogen 3.763 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 4.567 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100M OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 3.042 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L TYR 36 OH no hydrogen 2.952 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLN 89 OE1 no hydrogen 4.726 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 135 OG1 no hydrogen 4.920 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 no hydrogen 3.011 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O5 no hydrogen 4.876 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B GLN 130 OE1 no hydrogen 3.060 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 no hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 no hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 31 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 4.157 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L TYR 36 OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O O no hydrogen 4.223 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLN 38 NE2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLN 39 OE1 no hydrogen 2.438 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 46 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 101 O no hydrogen 4.804 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O4 no hydrogen 3.878 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O7 no hydrogen 4.344 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100N OH no hydrogen 5.013 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 no hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.745 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O4 no hydrogen 2.941 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.593 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 67 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 3.874 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B GLN 130 OE1 no hydrogen 3.855 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 96 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 60 OD1 no hydrogen 4.570 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L PHE 98 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H LEU 45 O no hydrogen 4.749 N/A
7t77 #4/A ASN 167 ND2 7t77 #4/H TYS 100G O1 no hydrogen 3.008 N/A
7t77 #4/A ARG 169 NH2 7t77 #4/H ASN 100C O no hydrogen 4.895 N/A
7t77 #4/C ARG 169 NH1 7t77 #4/H GLY 100D O no hydrogen 2.960 N/A
7t77 #4/C ARG 186 NH1 7t77 #4/H TYR 100N OH no hydrogen 4.377 N/A
7t77 #4/E LYS 168 NZ 7t77 #4/H TYS 100H O3 no hydrogen 3.135 N/A
7t77 #4/E ARG 169 N 7t77 #4/H ASN 100F O no hydrogen 3.121 N/A
7t77 #4/E LYS 171 N 7t77 #4/H ASP 100I O no hydrogen 4.240 N/A
7t77 #4/E LYS 171 NZ 7t77 #4/H ASP 100I OD1 no hydrogen 2.977 N/A
7t77 #4/E ARG 172 NH1 7t77 #4/H ASP 100L OD1 no hydrogen 3.106 N/A
7t77 #4/E ARG 172 NH2 7t77 #4/H ASP 100L OD1 no hydrogen 3.187 N/A
7t77 #4/E ARG 172 NH2 7t77 #4/H ASP 100L OD2 no hydrogen 4.092 N/A
7t77 #4/E TYR 173 OH 7t77 #4/H TYR 100K OH no hydrogen 3.176 N/A
7t77 #4/H ARG 31 NH1 7t77 #4/C ASP 185 OD2 no hydrogen 5.057 N/A
7t77 #4/H GLN 39 NE2 7t77 #4/L GLN 38 OE1 no hydrogen 2.971 N/A
7t77 #4/H SER 74 N 7t77 #4/j MAN 5 O6 no hydrogen 3.135 N/A
7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O4 no hydrogen 4.355 N/A
7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O6 no hydrogen 3.762 N/A
7t77 #4/H ARG 100B NE 7t77 #4/h NAG 1 O6 no hydrogen 2.959 N/A
7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O5 no hydrogen 3.418 N/A
7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O6 no hydrogen 2.953 N/A
7t77 #4/H ASN 100F N 7t77 #4/E ASN 167 O no hydrogen 3.325 N/A
7t77 #4/H ASN 100F ND2 7t77 #4/X NAG 1 O7 no hydrogen 5.183 N/A
7t77 #4/H TYS 100H N 7t77 #4/E ARG 169 O no hydrogen 2.976 N/A
7t77 #4/H TYR 100K N 7t77 #4/E LYS 171 O no hydrogen 4.380 N/A
7t77 #4/H TYR 100K OH 7t77 #4/E TYR 173 OH no hydrogen 3.176 N/A
7t77 #4/H TYR 100K OH 7t77 #4/j NAG 1 O4 no hydrogen 4.788 N/A
7t77 #4/H TYR 100K OH 7t77 #4/j NAG 2 O3 no hydrogen 4.518 N/A
7t77 #4/H ASN 100P N 7t77 #4/h MAN 5 O3 no hydrogen 4.984 N/A
7t77 #4/H ASN 100P ND2 7t77 #4/h MAN 5 O4 no hydrogen 2.860 N/A
7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O3 no hydrogen 3.359 N/A
7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O4 no hydrogen 3.351 N/A
7t77 #4/H HIS 100R NE2 7t77 #4/h MAN 5 O4 no hydrogen 3.440 N/A
7t77 #4/H MET 100T N 7t77 #4/L TYR 36 OH no hydrogen 2.800 N/A
7t77 #4/L GLN 1 N 7t77 #4/H ASP 61 OD2 no hydrogen 2.863 N/A
7t77 #4/L SER 32 OG 7t77 #4/H HIS 100R ND1 no hydrogen 4.017 N/A
7t77 #4/L SER 32 OG 7t77 #4/h MAN 6 O3 no hydrogen 2.926 N/A
7t77 #4/L SER 34 OG 7t77 #4/H HIS 100R O no hydrogen 4.978 N/A
7t77 #4/L TYR 36 OH 7t77 #4/H MET 100T O no hydrogen 3.815 N/A
7t77 #4/L GLN 38 NE2 7t77 #4/H GLN 39 OE1 no hydrogen 2.918 N/A
7t77 #4/L SER 56 N 7t77 #4/X BMA 3 O3 no hydrogen 5.008 N/A
7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O2 no hydrogen 4.789 N/A
7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O3 no hydrogen 3.927 N/A
7t77 #4/L TYR 87 OH 7t77 #4/H GLN 43 O no hydrogen 4.064 N/A
7t77 #4/L ARG 95 NH1 7t77 #4/H GLU 56 OE1 no hydrogen 3.124 N/A
7t77 #4/L ARG 95A NE 7t77 #4/H HIS 59 O no hydrogen 3.472 N/A
7t77 #4/L ARG 96 NE 7t77 #4/H GLU 95 OE2 no hydrogen 3.747 N/A
7t77 #4/L ARG 96 NH2 7t77 #4/H GLU 95 OE2 no hydrogen 2.855 N/A
7t77 #4/X BMA 3 O2 7t77 #4/L SER 56 OG no hydrogen 4.789 N/A
7t77 #4/X BMA 3 O3 7t77 #4/L SER 56 OG no hydrogen 3.927 N/A
7t77 #4/X BMA 3 O4 7t77 #4/L SER 56 OG no hydrogen 4.978 N/A
7t77 #4/h NAG 1 O6 7t77 #4/H ASP 100 OD2 no hydrogen 4.044 N/A
7t77 #4/h NAG 1 O6 7t77 #4/H TYS 100G O2 no hydrogen 4.935 N/A
7t77 #4/h NAG 2 N2 7t77 #4/H ASP 100 OD2 no hydrogen 4.837 N/A
7t77 #4/h MAN 4 O2 7t77 #4/L SER 32 OG no hydrogen 3.818 N/A
7t77 #4/h MAN 5 O4 7t77 #4/H HIS 100R NE2 no hydrogen 3.440 N/A
7t77 #4/h MAN 6 O2 7t77 #4/L GLU 31 O no hydrogen 4.821 N/A
7t77 #4/h MAN 6 O3 7t77 #4/H TYR 100Q O no hydrogen 4.294 N/A
7t77 #4/h MAN 6 O3 7t77 #4/H HIS 100R ND1 no hydrogen 3.359 N/A
7t77 #4/h MAN 6 O3 7t77 #4/L SER 32 OG no hydrogen 2.926 N/A
7t77 #4/h MAN 6 O3 7t77 #4/L ASP 50 OD2 no hydrogen 3.718 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H ASN 100P O no hydrogen 3.545 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H TYR 100Q O no hydrogen 2.714 N/A
7t77 #4/h MAN 6 O4 7t77 #4/H HIS 100R ND1 no hydrogen 3.351 N/A
7t77 #4/h MAN 6 O6 7t77 #4/H TYR 100Q O no hydrogen 4.679 N/A
7t77 #4/h MAN 6 O6 7t77 #4/L ASP 50 OD1 no hydrogen 3.389 N/A
7t77 #4/j NAG 2 N2 7t77 #4/H TYR 100K OH no hydrogen 2.783 N/A
7t77 #4/j NAG 2 O3 7t77 #4/H TYR 100K OH no hydrogen 4.518 N/A
7t77 #4/j BMA 3 O2 7t77 #4/H GLY 54 O no hydrogen 4.057 N/A
7t77 #4/j MAN 5 O2 7t77 #4/H ARG 71 O no hydrogen 5.083 N/A
7t77 #4/j MAN 5 O4 7t77 #4/H ASP 72 OD1 no hydrogen 3.091 N/A
7t77 #4/j MAN 5 O4 7t77 #4/H SER 74 OG no hydrogen 4.355 N/A
7t77 #4/j MAN 5 O6 7t77 #4/H ASP 72 OD1 no hydrogen 2.858 N/A
7t77 #4/j MAN 5 O6 7t77 #4/H SER 74 OG no hydrogen 3.762 N/A
305 hydrogen bonds found
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> style sel & #!1 sphere
Changed 1137 atom styles
> select clear
> transparency 50 :NAG, NAM, BMA, MAN sphere
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 :NAG, NAM, BMA, MAN surfaces
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 :NAG, NAM, BMA, MAN
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 :NAG, NAM, BMA, MAN
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 #1 :NAG, NAM, BMA, MAN
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 #1 :NAG, NAM, BMA, MAN atoms
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency :NAG, NAM, BMA, MAN atoms
Missing or invalid "percent" argument: Expected a number
> transparency :NAG, NAM, BMA, MAN atoms 50
Missing or invalid "percent" argument: Expected a number
> transparency :NAG, NAM, BMA, MAN 50
> transparency :NAG, NAM, BMA, MAN 50 atoms
> transparency :NAG, NAM, BMA, MAN 10 atoms
> transparency :NAG, NAM, BMA, MAN 0 atoms
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> show #!4 models
> hide #!3 models
> show #!3 models
> hide #!4 models
> show #!2 models
> hide #!3 models
> show #!1 models
> hide #!2 models
> close #6
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 327 residues, 4 models selected
> select #1 :NAG, NAM, BMA, MAN
1137 atoms, 1169 bonds, 84 residues, 1 model selected
> select clear
> hide #!1 atoms
> show #!1 atoms
> hide #!1 atoms
> select #1 :NAG, NAM, BMA, MAN
1137 atoms, 1169 bonds, 84 residues, 1 model selected
> style sel sphere
Changed 1137 atom styles
> show sel atoms
> select clear
> save "/Users/sphulera/OneDrive - The Scripps Research
> Institute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession#1.cxs"
> close #5
> distance #1 /B :795 @O6 #1 /H :100A @OD2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795
O6 and /H ASP 100A OD2: 2.836Å
> show #1 /B :795 #1 /H :100A
> ui tool show Distances
> distance style color #ff85ff
> distance style color #d783ff
> distance style color black
> close #5
> distance #1 /B :795 @O6 #1 /H :100A @OD2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795
O6 and /H ASP 100A OD2: 2.836Å
> ~hbonds
> distance style symbol false
> distance style symbol true
> hide #5.1 models
> distance style dashes 8
> distance style dashes 7
> distance style dashes 6
> distance style dashes 5
> distance style dashes 4
> distance style dashes 3
> distance style dashes 2
> distance style dashes 3
> distance style dashes 4
> distance style dashes 5
> distance style dashes 6
> distance style dashes 7
> distance style dashes 8
> distance style dashes 9
> distance style dashes 10
> distance style dashes 11
> distance style dashes 12
> distance style dashes 13
> distance style dashes 14
> distance style radius 0.05
> distance #1 /B :793 @O2 #1 /L :53 @OG
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793
O2 and /L SER 53 OG: 3.462Å
> show #1 /B :793 #1 /L :53
> show #1 /B :794 #1 /L :52
> distance #1 /B :794 @O3 #1 /L :52 @O
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794
O3 and /L SER 52 O: 2.876Å
> distance #1 /A :796 @O6 #1 /H :100B @O3
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> show #1 /A :769 #1 /H :100B
> distance #1 /A :769 @O6 #1 /H :100B @O3
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769
O6 and /H TYS 100B O3: 3.280Å
> distance #1 /B :792 @O4 #1 /L :31 @OH
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792
O4 and /L TYR 31 OH: 3.268Å
> show #1 /B :792 #1 /L :31
> distance style radius 0.01
> distance style radius 0.02
> distance style radius 0.04
> distance style radius 0.045
> distance style radius 0.05
> distance style dashes 20
> select #1 /A,B,C,H,L
16689 atoms, 17142 bonds, 17 pseudobonds, 2048 residues, 3 models selected
> ui tool show H-Bonds
> hbonds sel restrict both interModel false distSlop 2.0 intraMol false
> intraRes false reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
71 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O2 no hydrogen 3.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 158 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 3.190 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 no hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE2 no hydrogen 5.106 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 O no hydrogen 4.793 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 32 OD1 no hydrogen 2.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE1 no hydrogen 4.195 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E O no hydrogen 2.894 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG no hydrogen 4.810 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 NE Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100F OH no hydrogen 3.847 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD1 no hydrogen 2.460 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 3.284 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 2.527 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD2 no hydrogen 3.110 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 4.536 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG no hydrogen 4.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 189 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 O no hydrogen 3.911 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H THR 57 O no hydrogen 4.539 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 58 OD1 no hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ARG 169 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100D OH no hydrogen 3.779 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 4.851 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 4.640 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 5.017 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 2.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 33 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 170 OE1 no hydrogen 3.642 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no hydrogen 3.729 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no hydrogen 4.588 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no hydrogen 4.208 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 50 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 O no hydrogen 2.427 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.676 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.726 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASN 56 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 306 O no hydrogen 3.199 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LYS 64 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ILE 323 O no hydrogen 4.809 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.005 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.854 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 2.874 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 100H N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 4.086 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.866 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no hydrogen 2.822 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 OE1 no hydrogen 5.022 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no hydrogen 3.808 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no hydrogen 3.201 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no hydrogen 4.990 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no hydrogen 4.790 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no hydrogen 2.623 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no hydrogen 3.107 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no hydrogen 3.957 N/A
71 hydrogen bonds found
> select clear
> ~hbonds
> select #1 /A,B,C: NAG, NAM, BMA, MAN #1 /H,L
2930 atoms, 3010 bonds, 5 pseudobonds, 314 residues, 2 models selected
> ui tool show H-Bonds
> hbonds sel restrict both interModel false distSlop 2.0 intraMol false
> intraRes false reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
35 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no hydrogen 3.729 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no hydrogen 4.588 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no hydrogen 4.208 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.866 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no hydrogen 2.822 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no hydrogen 3.808 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no hydrogen 3.201 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no hydrogen 4.990 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no hydrogen 4.790 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no hydrogen 2.623 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no hydrogen 3.107 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no hydrogen 3.957 N/A
35 hydrogen bonds found
> select clear
> select #1 /A,B,C,H,L ~:NAG,NAM,BMA,MAN
Expected a keyword
> select #1 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN
15552 atoms, 15921 bonds, 25 pseudobonds, 1964 residues, 3 models selected
> hide sel atoms
> ~hbonds
> show #1 /B :792 #1 /L :31
> show #1 /A :769 #1 /H :100B
> show #1 /B :794 #1 /L :52
> show #1 /B :792,794,795,793,769 #1 /L :52
> select clear
> show #1 /B :792,794,795,793,769 #1 /L :31,100B,53,52 #1 /H :100A
> select clear
> list view
Unknown command: list view
> view list
Named views: TYR100B
> view TYR100B
> select clear
> ui tool show "Side View"
> hide #!1 models
> show #!2 models
> select #2 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN
14860 atoms, 15167 bonds, 20 pseudobonds, 1886 residues, 2 models selected
> hide sel atoms
> select #2 :NAG,NAM,BMA,MAN
971 atoms, 994 bonds, 73 residues, 1 model selected
> style sel sphere
Changed 971 atom styles
> show #!1 models
> hide #!2 models
> select #A :NAG,NAM,BMA,MAN
Expected an objects specifier or a keyword
> select #1 /A :NAG,NAM,BMA,MAN
372 atoms, 381 bonds, 27 residues, 1 model selected
> select #1 /A,B,C :180
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> hide sel atoms
> select #1 /A,B,C :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select #1 /A,B,C :156
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /A,B,C :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select #1 /A,B,C :197
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select #1 /A,B,C :301
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> view list
Named views: TYR100B
> view TYR100B
> lighting soft
> lighting simple
> lighting soft
> lighting full
> lighting soft
> save "/Users/sphulera/OneDrive - The Scripps Research
> Institute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession#1.cxs"
> show #!2 models
> hide #!1 models
> select #2 /B :731 #2 /L 31
Expected a keyword
> select #2 /B :731 #2 /L :31
20 atoms, 19 bonds, 2 residues, 1 model selected
> show sel atoms
> distance #2 /B :731 @O6 #2 /L :31 @OG
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG
731 O6 and /L SER 31 OG: 2.808Å
> show #!1 models
> hide #!1 models
> distance #2 /B :703 @O4 #2 /L :50 @nz
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG
703 O4 and /L LYS 50 NZ: 3.574Å
> show #2 /B :703 #2 /L :50
> show #2 /C :703 #2 /H :100A
> distance #2 /C :703 @O6 #2 /H :100A @OE1
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG
703 O6 and /H GLU 100A OE1: 3.271Å
> distance #2 /C :733 @O4 #2 /H :97 @O
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN
733 O4 and /H ILE 97 O: 3.751Å
> show #2 /H :97
> distance #2 /B :730 @O6 #2 /L :1 @N
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG
730 O6 and /L ASP 1 N: 3.632Å
> show #2 /L :1 @N
> show #2 /L :1
> distance #2 /c :733 @O6 #2 /L :56 @OD1
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN
733 O6 and /L ASP 56 OD1: 8.841Å
> show #2 /c :733 #2 /L :56
> show #2 /c :744 #2 /H :1
> distance #2 /c :744 &O6 #2 /H :1 @N
Expected a keyword
> distance #2 /C :744 &O6 #2 /H :1 @N
Expected a keyword
> distance #2 /C :744 @O6 #2 /H :1 @N
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN
744 O6 and /H GLN 1 N: 2.843Å
> select clear
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!3 models
> distance #3 /C :729 @O3 #3 /L :1 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG
729 O3 and /L ASP 1 N: 95.755Å
> ~distance #2/C:733@O6 #2/L:56@OD1
> distance #3 /b :729 @O3 #3 /L :1 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
729 O3 and /L ASP 1 N: 3.011Å
> show #3 /b :729 @O3 #3 /L :1 @N
> hide #!1 models
> ~distance #3/C:729@O3 #3/L:1@N
> select #3 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN
14917 atoms, 15255 bonds, 19 pseudobonds, 1896 residues, 2 models selected
> hide sel atoms
> distance #3 /B :729 @O3 #3 /L :1 @OD1
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
729 O3 and /L ASP 1 OD1: 2.873Å
> show #3 /B :729 #3 /L :1
> color (#!3 & sel) byhetero
> select clear
> show #3 /B :734 #3 /L :66
> distance #3 /B :734 @O4 #3 /L :66 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN
734 O4 and /L GLY 66 N: 2.941Å
> distance #3 /B :733 @O4 #3 /L :31 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN
733 O4 and /L SER 31 N: 7.644Å
> ~distance #3/B:733@O4 #3/L:31@N
> distance #3 /B :733 @O6 #3 /L :31 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN
733 O6 and /L SER 31 N: 3.809Å
> show #3 /B :733 @O6 #3 /L :31 @N
> show #3 /B :733 #3 /L :31
> show #3 /B :731 #3 /H :100G
> distance #3 /B :731 @O4 #3 /H :100G@OH
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
731 O4 and /H TYR 100G OH: 18.489Å
> ~distance #3/B:731@O4 #3/H:100G@OH
> distance #3 /C :731 @O4 #3 /H :100G@OH
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG
731 O4 and /H TYR 100G OH: 3.821Å
> show #3 /c :160
> show #3 /A :160
> show #3 /B :160
> show #3 /C :733 /H :97
> distance #3 /C :733 @O6 /H :97 @O
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN
733 O6 and /H ILE 97 O: 2.874Å
> distance #3 /B :703 @O6 /H :100H @O
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
703 O6 and /H TYR 100H O: 8.058Å
> show #3 /B :703 @O6 /H :100H @O
> ~distance #3/B:703@O6 #3/H:100H@O
> show #3 /B :703 @O6 #3 /H :100H @O
> distance #3 /B :703 @O6 #3 /H :100H @O
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
703 O6 and /H TYR 100H O: 8.058Å
> ~distance #3/B:703@O6 #3/H:100H@O
> distance #3 /B :703 @O6 #3 /H :100H @OH
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG
703 O6 and /H TYR 100H OH: 3.531Å
> show #3 /B :703 @O6 #3 /H :100H @OH
> show #3 /B :703 #3 /H :100H
> show #3 /C :733 #3 /L :56
> distance #3 /C :733 @O4 #3 /L :56 @OD2
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN
733 O4 and /L ASP 56 OD2: 3.734Å
> show #3 /B :133
> hide #!3 models
> show #!2 models
> show #2 :160
> show #2 :156
> distance save /Users/sphulera/Desktop/test
> show #2 :133
> show #2 :197
> show #2 :301
> distance #2 /B :733 @O6 #2 /L :31 @N
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN
733 O6 and /L SER 31 N: 3.309Å
> ~distance #3/B:733@O6 #3/L:31@N
> distance #2 /B :733 @O3 #2 /L :31 @OD1
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> distance #2 /C :733 @O3 #2 /L :31 @OD1
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> distance #2 /C :733 @O3 #2 /L :56 @OD1
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN
733 O3 and /L ASP 56 OD1: 2.931Å
> show #!1 models
> hide #!2 models
> view list
Named views: TYR100B
> view TYR100B
> ui tool show "Side View"
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> distance #2 /B :733 @O6 #2 /L :31 @N
Distance already exists; modify distance properties with 'distance style'
> show #!2 models
> hide #!3 models
> show #!3 models
> distance #3 /B :733 @O6 #3 /L :31 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN
733 O6 and /L SER 31 N: 3.809Å
> hide #!3 models
> show #!3 models
> hide #!2 models
> show #!2 models
> hide #!3 models
> show #!3 models
> hide #!3 models
> hide #!2 models
> show #!1 models
> view name G1
> view name G2
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> view name G3
> view g1
Expected an objects specifier or a view name or a keyword
> view G1
> hide #!3 models
> show #!2 models
> view G1
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!2 models
> show #!2 models
> hide #!2 models
> show #!3 models
> hide #!1 models
> show #!1 models
> view G2
> hide #!3 models
> view G1
> view G2
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> show #!1 models
> hide #!3 models
> view G2
> view G3
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> hide #!3 models
> show #!1 models
> view G1
> select clear
> save /Users/sphulera/Desktop/image53.png supersample 3
> view G2
> save /Users/sphulera/Desktop/image54.png supersample 3
> view G3
> save /Users/sphulera/Desktop/image55.png supersample 3
> show #!2 models
> hide #!1 models
> view G2
> save /Users/sphulera/Desktop/image56.png supersample 3
> view G3
> save /Users/sphulera/Desktop/image57.png supersample 3
> show #!3 models
> hide #!2 models
> view G2
> save /Users/sphulera/Desktop/image58.png supersample 3
> view G3
> save /Users/sphulera/Desktop/image59.png supersample 3
> view G2
> select clear
> select /L :24-34
349 atoms, 350 bonds, 47 residues, 4 models selected
> view G2
===== Log before crash end =====
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 88.1
OpenGL renderer: Apple M3
OpenGL vendor: Apple
Python: 3.11.4
Locale: UTF-8
Qt version: PyQt6 6.7.1, Qt 6.7.1
Qt runtime version: 6.7.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: Mac15,12
Model Number: Z1B600163LL/A
Chip: Apple M3
Total Number of Cores: 8 (4 performance and 4 efficiency)
Memory: 16 GB
System Firmware Version: 10151.121.1
OS Loader Version: 10151.121.1
Software:
System Software Overview:
System Version: macOS 14.5 (23F79)
Kernel Version: Darwin 23.5.0
Time since boot: 4 days, 23 hours, 31 minutes
Graphics/Displays:
Apple M3:
Chipset Model: Apple M3
Type: GPU
Bus: Built-In
Total Number of Cores: 10
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina Display
Resolution: 2560 x 1664 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
LG HDR 4K:
Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition)
UI Looks like: 1920 x 1080 @ 60.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
alabaster: 1.0.0
anyio: 4.7.0
appdirs: 1.4.4
appnope: 0.1.4
asttokens: 3.0.0
auditwheel: 6.1.0
babel: 2.16.0
beautifulsoup4: 4.12.3
blockdiag: 3.0.0
blosc2: 3.0.0
build: 1.2.1
certifi: 2023.11.17
cftime: 1.6.4.post1
charset-normalizer: 3.4.0
ChimeraX-AddCharge: 1.5.18
ChimeraX-AddH: 2.2.6
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.5
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.16.1
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.1.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.58.8
ChimeraX-AtomicLibrary: 14.1.11
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 3.0.0
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.13.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.4.0
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.4
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.3
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.6
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.9
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.4
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2.6
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.3
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-KVFinder: 1.2.1
ChimeraX-Label: 1.1.14
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.6
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.7.2
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.14.2
ChimeraX-MMTF: 2.2
ChimeraX-ModelArchive: 1.0
ChimeraX-Modeller: 1.5.18
ChimeraX-ModelPanel: 1.5
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-MutationScores: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.14
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.6
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.2
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.6.2
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.5.6
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.14
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.0
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-SimilarStructures: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.18.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.41
ChimeraX-Umap: 1.0
ChimeraX-uniprot: 2.3.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.4.4
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.4
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.2
contourpy: 1.3.1
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.0.10
debugpy: 1.8.9
decorator: 5.1.1
docutils: 0.21.2
executing: 2.1.0
filelock: 3.15.4
fonttools: 4.55.3
funcparserlib: 2.0.0a0
glfw: 2.8.0
grako: 3.16.5
h11: 0.14.0
h5py: 3.12.1
html2text: 2024.2.26
httpcore: 1.0.7
httpx: 0.28.1
idna: 3.10
ihm: 1.3
imagecodecs: 2024.6.1
imagesize: 1.4.1
ipykernel: 6.29.5
ipython: 8.26.0
ipywidgets: 8.1.5
jedi: 0.19.1
Jinja2: 3.1.4
jupyter_client: 8.6.2
jupyter_core: 5.7.2
jupyterlab_widgets: 3.0.13
kiwisolver: 1.4.7
line_profiler: 4.1.3
lxml: 5.2.2
lz4: 4.3.3
MarkupSafe: 3.0.2
matplotlib: 3.9.2
matplotlib-inline: 0.1.7
msgpack: 1.0.8
ndindex: 1.9.2
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.10.2
numpy: 1.26.4
openvr: 1.26.701
packaging: 23.2
ParmEd: 4.2.2
parso: 0.8.4
pep517: 0.13.1
pexpect: 4.9.0
pillow: 10.4.0
pip: 24.2
pkginfo: 1.11.1
platformdirs: 4.3.6
prompt_toolkit: 3.0.48
psutil: 6.0.0
ptyprocess: 0.7.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pycollada: 0.8
pydicom: 2.4.4
pyelftools: 0.31
Pygments: 2.18.0
pynmrstar: 3.3.4
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.3401
pyparsing: 3.2.0
pyproject_hooks: 1.2.0
PyQt6-commercial: 6.7.1
PyQt6-Qt6: 6.7.3
PyQt6-WebEngine-commercial: 6.7.0
PyQt6-WebEngine-Qt6: 6.7.3
PyQt6-WebEngineSubwheel-Qt6: 6.7.3
PyQt6_sip: 13.8.0
python-dateutil: 2.9.0.post0
pytz: 2024.2
pyzmq: 26.2.0
qtconsole: 5.5.2
QtPy: 2.4.2
qtshim: 1.0
RandomWords: 0.4.0
requests: 2.32.3
scipy: 1.14.0
setuptools: 72.1.0
sfftk-rw: 0.8.1
six: 1.16.0
sniffio: 1.3.1
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.6
Sphinx: 8.0.2
sphinx-autodoc-typehints: 2.2.3
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
stack-data: 0.6.3
superqt: 0.6.3
tables: 3.10.1
tcia_utils: 1.5.1
tifffile: 2024.7.24
tinyarray: 1.2.4
tornado: 6.4.2
traitlets: 5.14.3
typing_extensions: 4.12.2
tzdata: 2024.2
urllib3: 2.2.3
wcwidth: 0.2.13
webcolors: 24.6.0
wheel: 0.43.0
wheel-filename: 1.4.1
widgetsnbextension: 4.0.13
Change History (3)
comment:1 by , 9 months ago
| Component: | Unassigned → Window Toolkit |
|---|---|
| Description: | modified (diff) |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Window moved between screens(?) |
comment:2 by , 9 months ago
yes
From: ChimeraX <ChimeraX-bugs-admin@cgl.ucsf.edu>
Date: Monday, January 27, 2025 at 11:08 AM
To: goddard@cgl.ucsf.edu <goddard@cgl.ucsf.edu>, Swastik Phulera <sphulera@scripps.edu>
Subject: Re: [ChimeraX] #16699: Window moved between screens(?) (was: ChimeraX bug report submission)
#16699: Window moved between screens(?)
-------------------------------------+-------------------------
Reporter: sphulera@… | Owner: Tom Goddard
Type: defect | Status: assigned
Priority: normal | Milestone:
Component: Window Toolkit | Version:
Resolution: | Keywords:
Blocked By: | Blocking:
Notify when closed: | Platform: all
Project: ChimeraX |
-------------------------------------+-------------------------
Changes (by pett):
* component: Unassigned => Window Toolkit
* owner: (none) => Tom Goddard
* platform: => all
* project: => ChimeraX
* status: new => assigned
* summary: ChimeraX bug report submission => Window moved between
screens(?)
Old description:
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
New description:
{{{
The following bug report has been submitted:
Platform: macOS-14.5-arm64-arm-64bit
ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC)
Description
Last time you used ChimeraX it crashed.
This is a known crash that we are unable to fix. Here is information that
may help you avoid this crash. The Qt window toolkit crashed due to a
display configuration change, typically when waking from sleep or when an
external display is disconnected or connected. This has only been seen on
Mac computers. We hope a newer version of Qt will fix it. We update
ChimeraX daily builds whenever a new Qt is released. You can check here
https://www.cgl.ucsf.edu/chimerax/docs/troubleshoot.html#macdisplay to see
if it has been fixed in a newer ChimeraX.
Fatal Python error: Segmentation fault
Current thread 0x00000001ee290c00 (most recent call first):
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11
/site-packages/chimerax/ui/gui.py", line 330 in event_loop
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11
/site-packages/chimerax/core/__main__.py", line 1054 in init
File
"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11
/site-packages/chimerax/core/__main__.py", line 1217 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath,
numpy.core._multiarray_tests, numpy.linalg._umath_linalg,
numpy.fft._pocketfft_internal, numpy.random._common,
numpy.random.bit_generator, numpy.random._bounded_integers,
numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox,
numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator,
chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets,
PyQt6.QtNetwork, PyQt6.QtPrintSupport, PyQt6.QtWebChannel,
PyQt6.QtWebEngineCore, PyQt6.QtWebEngineWidgets,
chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol,
chimerax.atomic.cytmpl, chimerax.map._map, charset_normalizer.md,
requests.packages.charset_normalizer.md, requests.packages.chardet.md,
PIL._imaging, kiwisolver._cext, chimerax.pdb_lib._load_libs,
OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper,
OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype,
OpenGL_accelerate.latebind, OpenGL_accelerate.vbo,
chimerax.surface._surface, chimerax.core._mac_util,
OpenGL_accelerate.numpy_formathandler,
OpenGL_accelerate.nones_formathandler, lz4._version, lz4.frame._frame,
msgpack._cmsgpack, chimerax.core._serialize, PyQt6.QtOpenGL,
PyQt6.QtOpenGLWidgets, chimerax.atomic._ribbons,
chimerax.graphics._graphics, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif,
chimerax.pdb._pdbio, lxml._elementpath, lxml.etree, PIL._imagingmath,
chimerax.atom_search.ast, chimerax.chem_group._chem_group (total: 60)
{"app_name":"ChimeraX","timestamp":"2025-01-26 16:09:56.00
-0800","app_version":"1.9.0","slice_uuid":"17982d98-65bc-3327-8526-577ec996453c","build_version":"1.9.0.0","platform":1,"bundleID":"edu.ucsf.cgl.ChimeraX","share_with_app_devs":0,"is_first_party":0,"bug_type":"309","os_version":"macOS
14.5 (23F79)","roots_installed":0,"name":"ChimeraX","incident_id
":"B72D722B-57BF-4F3C-9885-D14E7EFDD484"}
{
"uptime" : 180000,
"procRole" : "Foreground",
"version" : 2,
"userID" : 501,
"deployVersion" : 210,
"modelCode" : "Mac15,12",
"coalitionID" : 1768,
"osVersion" : {
"train" : "macOS 14.5",
"build" : "23F79",
"releaseType" : "User"
},
"captureTime" : "2025-01-26 16:09:47.1853 -0800",
"codeSigningMonitor" : 1,
"incident" : "B72D722B-57BF-4F3C-9885-D14E7EFDD484",
"pid" : 19439,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2025-01-24 16:55:08.7857 -0800",
"procStartAbsTime" : 3270533406979,
"procExitAbsTime" : 4451655560080,
"procName" : "ChimeraX",
"procPath" :
"\/Applications\/ChimeraX-1.9.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" :
{"CFBundleShortVersionString":"1.9.0","CFBundleVersion":"1.9.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"292D261C-48B5-505D-96AA-
1C3B54C1D842","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "3587406A-7241-238D-D039-C9AD257A1AF4",
"lowPowerMode" : 1,
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 4294967295,
"instructionByteStream" :
{"beforePC":"fyMD1f17v6n9AwCRW+D\/l78DAJH9e8Go\/w9f1sADX9YQKYDSARAA1A==","atPC":"AwEAVH8jA9X9e7+p\/QMAkVDg\/5e\/AwCR\/XvBqP8PX9bAA1\/WcAqA0g=="},
"wakeTime" : 2624,
"sleepWakeUUID" : "0A4F168A-58EC-4064-AC36-ADD6769D2BBB",
"sip" : "enabled",
"vmRegionInfo" : "0x37e3724dc38 is not in any region. Bytes after
previous region: 3359589588025 Bytes before following region:
101712490341320\n REGION TYPE START - END
[ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n commpage (reserved)
1000000000-7000000000 [384.0G] ---\/--- SM=NUL reserved VM address
space (unallocated)\n---> GAP OF 0x5f9000000000 BYTES\n MALLOC_NANO
600000000000-600020000000 [512.0M] rw-\/rwx SM=PRV ",
"exception" : {"codes":"0x0000000000000001,
0x0000837e3724dc38","rawCodes":[1,144578114280504],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS
at 0x0000837e3724dc38 -> 0x0000037e3724dc38 (possible pointer
authentication failure)"},
"termination" :
{"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault:
11","byProc":"ChimeraX","byPid":19439},
"vmregioninfo" : "0x37e3724dc38 is not in any region. Bytes after
previous region: 3359589588025 Bytes before following region:
101712490341320\n REGION TYPE START - END
[ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n commpage (reserved)
1000000000-7000000000 [384.0G] ---\/--- SM=NUL reserved VM address
space (unallocated)\n---> GAP OF 0x5f9000000000 BYTES\n MALLOC_NANO
600000000000-600020000000 [512.0M] rw-\/rwx SM=PRV ",
"extMods" :
{"caller":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"system":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"targeted":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"warnings":0},
"faultingThread" : 0,
"threads" :
[{"threadState":{"x":[{"value":0},{"value":0},{"value":1},{"value":4697914008},{"value":99},{"value":95},{"value":3458870066980709472},{"value":0},{"value":1373484244169906820},{"value":1373484247695677060},{"value":14757395258967641293},{"value":4294967286},{"value":4697913938},{"value":0},{"value":54},{"value":4294967280},{"value":328},{"value":8462293288},{"value":0},{"value":11},{"value":8290634752,"symbolLocation":0,"symbol":"_main_thread"},{"value":259},{"value":8290634976,"symbolLocation":224,"symbol":"_main_thread"},{"value":1},{"value":4332963376,"symbolLocation":0,"symbol":"faulthandler_handlers"},{"value":8296194048,"symbolLocation":0,"symbol":"OBJC_IVAR_$_NSCGSStatusItem._selectedContentFrame"},{"value":8296194048,"symbolLocation":0,"symbol":"OBJC_IVAR_$_NSCGSStatusItem._selectedContentFrame"},{"value":5},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547663904},"cpsr":{"value":1073745920},"fp":{"value":4697914080},"sp":{"value":4697914048},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547434080,"matchesCrashFrame":1},"far":{"value":0}},"id":1945529,"triggered":true,"name":"CrBrowserMain","queue":"com.apple
.main-
thread","frames":[{"imageOffset":39520,"symbol":"__pthread_kill","symbolLocation":8,"imageIndex":156},{"imageOffset":27680,"symbol":"pthread_kill","symbolLocation":288,"imageIndex":157},{"imageOffset":262624,"symbol":"raise","symbolLocation":32,"imageIndex":158},{"imageOffset":2417160,"symbol":"faulthandler_fatal_error","symbolLocation":392,"imageIndex":154},{"imageOffset":17796,"symbol":"_sigtramp","symbolLocation":56,"imageIndex":159},{"imageOffset":349344,"imageIndex":86},{"imageOffset":349160,"imageIndex":86},{"imageOffset":380476,"symbol":"_NSViewHierarchyDidChangeBackingProperties","symbolLocation":244,"imageIndex":160},{"imageOffset":11481908,"symbol":"-[NSWindow
_postWindowDidChangeBackingPropertiesAndDisplayWindowForPreviousBackingScaleFactor:previousColorSpace:]","symbolLocation":192,"imageIndex":160},{"imageOffset":2095700,"symbol":"__67-[NSWindow
_updateSettingsSendingScreenChangeNotificationToScreen:]_block_invoke","symbolLocation":448,"imageIndex":160},{"imageOffset":510116,"symbol":"NSPerformVisuallyAtomicChange","symbolLocation":108,"imageIndex":160},{"imageOffset":2095240,"symbol":"-[NSWindow
_updateSettingsSendingScreenChangeNotificationToScreen:]","symbolLocation":96,"imageIndex":160},{"imageOffset":515444,"symbol":"-[NSWindow
_setFrameCommon:display:fromServer:]","symbolLocation":1856,"imageIndex":160},{"imageOffset":11490008,"symbol":"-[NSWindow
_windowMovedToRect:dueToMoveEvent:]","symbolLocation":184,"imageIndex":160},{"imageOffset":1469112,"symbol":"-[NSWindow
_windowMoved:]","symbolLocation":832,"imageIndex":160},{"imageOffset":1468204,"symbol":"-[NSWindow
_internalHandleAppKitDefinedEvent:]","symbolLocation":152,"imageIndex":160},{"imageOffset":1467892,"symbol":"-[NSWindow(NSEventRouting)
_reallySendEvent:isDelayedEvent:]","symbolLocation":776,"imageIndex":160},{"imageOffset":1466648,"symbol":"-[NSWindow(NSEventRouting)
sendEvent:]","symbolLocation":284,"imageIndex":160},{"imageOffset":423528,"imageIndex":86},{"imageOffset":8579308,"symbol":"-[NSApplication(NSEventRouting)
sendEvent:]","symbolLocation":1800,"imageIndex":160},{"imageOffset":38456,"imageIndex":86},{"imageOffset":4704412,"symbol":"-[NSApplication
_handleEvent:]","symbolLocation":60,"imageIndex":160},{"imageOffset":184512,"symbol":"-[NSApplication
run]","symbolLocation":512,"imageIndex":160},{"imageOffset":88376,"imageIndex":86},{"imageOffset":572692,"symbol":"QEventLoop::exec(QFlags)","symbolLocation":540,"imageIndex":111},{"imageOffset":534620,"symbol":"QCoreApplication::exec()","symbolLocation":112,"imageIndex":111},{"imageOffset":2477972,"symbol":"meth_QApplication_exec(_object*,
_object*)","symbolLocation":96,"imageIndex":104},{"imageOffset":1004504,"symbol":"cfunction_call","symbolLocation":96,"imageIndex":154},{"imageOffset":594156,"symbol":"_PyObject_MakeTpCall","symbolLocation":128,"imageIndex":154},{"imageOffset":1789244,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":54984,"imageIndex":154},{"imageOffset":1729512,"symbol":"PyEval_EvalCode","symbolLocation":276,"imageIndex":154},{"imageOffset":1707120,"symbol":"builtin_exec","symbolLocation":428,"imageIndex":154},{"imageOffset":1007044,"symbol":"cfunction_vectorcall_FASTCALL_KEYWORDS","symbolLocation":80,"imageIndex":154},{"imageOffset":1788292,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":54032,"imageIndex":154},{"imageOffset":1811404,"symbol":"_PyEval_Vector","symbolLocation":156,"imageIndex":154},{"imageOffset":2389028,"symbol":"pymain_run_module","symbolLocation":256,"imageIndex":154},{"imageOffset":2387652,"symbol":"Py_RunMain","symbolLocation":1784,"imageIndex":154},{"imageOffset":2392180,"symbol":"pymain_main","symbolLocation":52,"imageIndex":154},{"imageOffset":2392116,"symbol":"Py_Main","symbolLocation":36,"imageIndex":154},{"imageOffset":15700,"symbol":"main","symbolLocation":128,"imageIndex":155},{"imageOffset":24800,"symbol":"start","symbolLocation":2360,"imageIndex":161}]},{"id":1945637,"name":"ThreadPoolServiceThread","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553146069760},{"value":4},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":3},{"value":9895604652290},{"value":6344743504},{"value":37891},{"value":1},{"value":1},{"value":369},{"value":6401110016},{"value":0},{"value":6368235552},{"value":4313841344},{"value":6401109328},{"value":0},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6234504104},"cpsr":{"value":2684358656},"fp":{"value":6401109312},"sp":{"value":6401109216},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547448140},"far":{"value":0}},"frames":[{"imageOffset":53580,"symbol":"kevent64","symbolLocation":8,"imageIndex":156},{"imageOffset":71187368,"imageIndex":94},{"imageOffset":71186848,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70856668,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945638,"name":"ThreadPoolForegroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":163840117440512},{"value":0},{"value":163840117440512},{"value":32},{"value":0},{"value":18446744073709550527},{"value":38147},{"value":0},{"value":1},{"value":38147},{"value":0},{"value":2043},{"value":2279946526},{"value":18446744073709551569},{"value":8462295880},{"value":0},{"value":0},{"value":32},{"value":163840117440512},{"value":0},{"value":163840117440512},{"value":6409530672},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":6409530016},"sp":{"value":6409529936},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902644,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945639,"name":"ThreadPoolBackgroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":170437187207168},{"value":0},{"value":170437187207168},{"value":32},{"value":0},{"value":18446744073709550527},{"value":39683},{"value":0},{"value":1},{"value":39683},{"value":0},{"value":2043},{"value":4091773114},{"value":18446744073709551569},{"value":8462295880},{"value":0},{"value":0},{"value":32},{"value":170437187207168},{"value":0},{"value":170437187207168},{"value":6417952048},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":6417951392},"sp":{"value":6417951312},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902696,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945640,"name":"Chrome_IOThread","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553136859776},{"value":4},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":9223372036854775809},{"value":6344743552},{"value":44291},{"value":1},{"value":1},{"value":369},{"value":6426374144},{"value":0},{"value":6368226976},{"value":6368146208},{"value":6426373440},{"value":0},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6234504104},"cpsr":{"value":1610616832},"fp":{"value":6426373424},"sp":{"value":6426373328},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547448140},"far":{"value":0}},"frames":[{"imageOffset":53580,"symbol":"kevent64","symbolLocation":8,"imageIndex":156},{"imageOffset":71187368,"imageIndex":94},{"imageOffset":71186848,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":45328188,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945641,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":273791280218112},{"value":0},{"value":273791280218112},{"value":32},{"value":0},{"value":18446744073709550527},{"value":63747},{"value":0},{"value":1},{"value":63747},{"value":64003},{"value":1},{"value":1},{"value":18446744073709551569},{"value":6434795520},{"value":0},{"value":0},{"value":32},{"value":273791280218112},{"value":0},{"value":273791280218112},{"value":6434794560},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":6434793904},"sp":{"value":6434793824},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945642,"name":"ThreadPoolForegroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":270527105073152},{"value":0},{"value":270527105073152},{"value":32},{"value":0},{"value":18446744073709550527},{"value":62987},{"value":0},{"value":1},{"value":62987},{"value":0},{"value":2043},{"value":2724814918},{"value":18446744073709551569},{"value":8462295880},{"value":0},{"value":0},{"value":32},{"value":270527105073152},{"value":0},{"value":270527105073152},{"value":12893302064},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12893301408},"sp":{"value":12893301328},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902644,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945643,"name":"ThreadPoolForegroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":269393233707008},{"value":0},{"value":269393233707008},{"value":32},{"value":0},{"value":18446744073709550527},{"value":62723},{"value":0},{"value":1},{"value":62723},{"value":0},{"value":2043},{"value":3709952142},{"value":18446744073709551569},{"value":8462295880},{"value":0},{"value":0},{"value":32},{"value":269393233707008},{"value":0},{"value":269393233707008},{"value":12901723440},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12901722784},"sp":{"value":12901722704},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902644,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945644,"name":"ThreadPoolForegroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":201223512784896},{"value":0},{"value":201223512784896},{"value":32},{"value":0},{"value":18446744073709550527},{"value":46851},{"value":0},{"value":1},{"value":46851},{"value":2045},{"value":2653102232},{"value":152},{"value":18446744073709551569},{"value":204800},{"value":0},{"value":0},{"value":32},{"value":201223512784896},{"value":0},{"value":201223512784896},{"value":12910144816},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12910144160},"sp":{"value":12910144080},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902644,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945645,"name":"Chrome_InProcGpuThread","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":261696652312576},{"value":0},{"value":261696652312576},{"value":32},{"value":0},{"value":18446744073709550527},{"value":60931},{"value":0},{"value":1},{"value":60931},{"value":47619},{"value":1},{"value":1},{"value":18446744073709551569},{"value":12918566912},{"value":0},{"value":0},{"value":32},{"value":261696652312576},{"value":0},{"value":261696652312576},{"value":12918565952},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12918565296},"sp":{"value":12918565216},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945646,"name":"Chrome_ChildIOThread","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553157245472},{"value":1},{"value":0},{"value":0},{"value":12926985952},{"value":0},{"value":0},{"value":1},{"value":14293651164418},{"value":6344743648},{"value":48387},{"value":1},{"value":1},{"value":369},{"value":12926988288},{"value":0},{"value":6366333152},{"value":6364765440},{"value":12926987584},{"value":0},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6234504104},"cpsr":{"value":2684358656},"fp":{"value":12926987568},"sp":{"value":12926987472},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547448140},"far":{"value":0}},"frames":[{"imageOffset":53580,"symbol":"kevent64","symbolLocation":8,"imageIndex":156},{"imageOffset":71187368,"imageIndex":94},{"imageOffset":71186848,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":114048632,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945647,"name":"CompositorTileWorker1","threadState":{"x":[{"value":260},{"value":0},{"value":768},{"value":0},{"value":0},{"value":161},{"value":0},{"value":0},{"value":12935409224},{"value":0},{"value":4516050608},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4516050584},{"value":4516050712},{"value":12935409888},{"value":0},{"value":0},{"value":768},{"value":769},{"value":1024},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":12935409344},"sp":{"value":12935409200},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}},"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":71055056,"imageIndex":94},{"imageOffset":104344336,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945648,"name":"ThreadPoolSingleThreadSharedForeground0","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":214417652318208},{"value":0},{"value":214417652318208},{"value":32},{"value":0},{"value":18446744073709550527},{"value":49923},{"value":0},{"value":1},{"value":49923},{"value":2045},{"value":2187995152},{"value":16},{"value":18446744073709551569},{"value":665600},{"value":0},{"value":0},{"value":32},{"value":214417652318208},{"value":0},{"value":214417652318208},{"value":12943830320},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12943829664},"sp":{"value":12943829584},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70903324,"imageIndex":94},{"imageOffset":70902728,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945650,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":221014722084864},{"value":0},{"value":221014722084864},{"value":32},{"value":0},{"value":18446744073709550527},{"value":51459},{"value":0},{"value":1},{"value":51459},{"value":58883},{"value":1},{"value":1},{"value":18446744073709551569},{"value":12960002048},{"value":0},{"value":0},{"value":32},{"value":221014722084864},{"value":0},{"value":221014722084864},{"value":12960001088},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12960000432},"sp":{"value":12960000352},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945651,"name":"VizCompositorThread","threadState":{"x":[{"value":268451845},{"value":17179869442},{"value":0},{"value":247403001151488},{"value":0},{"value":247403001151488},{"value":32},{"value":16},{"value":18446744073709550527},{"value":57603},{"value":0},{"value":1},{"value":57603},{"value":52483},{"value":1},{"value":1},{"value":18446744073709551569},{"value":12968423424},{"value":0},{"value":16},{"value":32},{"value":247403001151488},{"value":0},{"value":247403001151488},{"value":12968422480},{"value":0},{"value":17179870466},{"value":17179869442},{"value":1282}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12968421824},"sp":{"value":12968421744},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70343392,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945652,"name":"NetworkService","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553130081280},{"value":2},{"value":0},{"value":0},{"value":12985575184},{"value":0},{"value":0},{"value":9223372036854775807},{"value":185477246250},{"value":6344743840},{"value":53251},{"value":1},{"value":1},{"value":369},{"value":12985577472},{"value":0},{"value":6366498176},{"value":6368579216},{"value":12985576816},{"value":0},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6234504104},"cpsr":{"value":2684358656},"fp":{"value":12985576800},"sp":{"value":12985576704},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547448140},"far":{"value":0}},"frames":[{"imageOffset":53580,"symbol":"kevent64","symbolLocation":8,"imageIndex":156},{"imageOffset":71187368,"imageIndex":94},{"imageOffset":71186848,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945653,"name":"NetworkNotificationThreadMac","threadState":{"x":[{"value":268451845},{"value":21592279046},{"value":8589934592},{"value":240805931384832},{"value":0},{"value":240805931384832},{"value":2},{"value":4294967295},{"value":18446744073709550527},{"value":56067},{"value":0},{"value":1},{"value":56067},{"value":134836},{"value":0},{"value":10995116277760},{"value":18446744073709551569},{"value":8462277376},{"value":0},{"value":4294967295},{"value":2},{"value":240805931384832},{"value":0},{"value":240805931384832},{"value":12993994200},{"value":8589934592},{"value":21592279046},{"value":21592279046},{"value":4412409862}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":12993994048},"sp":{"value":12993993968},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":517760,"symbol":"__CFRunLoopServiceMachPort","symbolLocation":160,"imageIndex":163},{"imageOffset":511812,"symbol":"__CFRunLoopRun","symbolLocation":1208,"imageIndex":163},{"imageOffset":508980,"symbol":"CFRunLoopRunSpecific","symbolLocation":608,"imageIndex":163},{"imageOffset":375432,"symbol":"-[NSRunLoop(NSRunLoop)
runMode:beforeDate:]","symbolLocation":212,"imageIndex":164},{"imageOffset":71382916,"imageIndex":94},{"imageOffset":71377136,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945654,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":236407884873728},{"value":0},{"value":236407884873728},{"value":32},{"value":0},{"value":18446744073709550527},{"value":55043},{"value":0},{"value":1},{"value":55043},{"value":55299},{"value":1},{"value":1},{"value":18446744073709551569},{"value":13002420224},{"value":0},{"value":0},{"value":32},{"value":236407884873728},{"value":0},{"value":236407884873728},{"value":13002419264},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13002418608},"sp":{"value":13002418528},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945655,"name":"ThreadPoolSingleThreadForegroundBlocking1","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":284786396495872},{"value":0},{"value":284786396495872},{"value":32},{"value":0},{"value":18446744073709550527},{"value":66307},{"value":0},{"value":1},{"value":66307},{"value":0},{"value":2393039166},{"value":318},{"value":18446744073709551569},{"value":12969593344},{"value":0},{"value":0},{"value":32},{"value":284786396495872},{"value":0},{"value":284786396495872},{"value":13010840880},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13010840224},"sp":{"value":13010840144},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70904380,"imageIndex":94},{"imageOffset":70902712,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945673,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":308975652306944},{"value":0},{"value":308975652306944},{"value":32},{"value":0},{"value":18446744073709550527},{"value":71939},{"value":0},{"value":1},{"value":71939},{"value":71683},{"value":1},{"value":1},{"value":18446744073709551569},{"value":13243592704},{"value":0},{"value":0},{"value":32},{"value":308975652306944},{"value":0},{"value":308975652306944},{"value":13243591744},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13243591088},"sp":{"value":13243591008},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945689,"name":"ThreadPoolBackgroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":513484815073280},{"value":0},{"value":513484815073280},{"value":32},{"value":0},{"value":18446744073709550527},{"value":119555},{"value":0},{"value":1},{"value":119555},{"value":2045},{"value":3594975410},{"value":178},{"value":18446744073709551569},{"value":4431407616},{"value":0},{"value":0},{"value":32},{"value":513484815073280},{"value":0},{"value":513484815073280},{"value":13474344240},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13474343584},"sp":{"value":13474343504},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70903324,"imageIndex":94},{"imageOffset":70902696,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945698,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":176128},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13547302600},{"value":0},{"value":4473610280,"symbolLocation":40,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610256,"symbolLocation":16,"symbol":"thread_status"},{"value":4473610320,"symbolLocation":80,"symbol":"thread_status"},{"value":13547303136},{"value":0},{"value":0},{"value":176128},{"value":176129},{"value":176384},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13547302720},"sp":{"value":13547302576},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945699,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":175872},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13547876040},{"value":0},{"value":4473610408,"symbolLocation":168,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610384,"symbolLocation":144,"symbol":"thread_status"},{"value":4473610448,"symbolLocation":208,"symbol":"thread_status"},{"value":13547876576},{"value":0},{"value":0},{"value":175872},{"value":175873},{"value":176128},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13547876160},"sp":{"value":13547876016},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945700,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13548449480},{"value":0},{"value":4473610536,"symbolLocation":296,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610512,"symbolLocation":272,"symbol":"thread_status"},{"value":4473610576,"symbolLocation":336,"symbol":"thread_status"},{"value":13548450016},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13548449600},"sp":{"value":13548449456},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945701,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13549022920},{"value":0},{"value":4473610664,"symbolLocation":424,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610640,"symbolLocation":400,"symbol":"thread_status"},{"value":4473610704,"symbolLocation":464,"symbol":"thread_status"},{"value":13549023456},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13549023040},"sp":{"value":13549022896},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945702,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13549596360},{"value":0},{"value":4473610792,"symbolLocation":552,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610768,"symbolLocation":528,"symbol":"thread_status"},{"value":4473610832,"symbolLocation":592,"symbol":"thread_status"},{"value":13549596896},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13549596480},"sp":{"value":13549596336},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945703,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13550169800},{"value":0},{"value":4473610920,"symbolLocation":680,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473610896,"symbolLocation":656,"symbol":"thread_status"},{"value":4473610960,"symbolLocation":720,"symbol":"thread_status"},{"value":13550170336},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13550169920},"sp":{"value":13550169776},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945704,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":134},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13550743240},{"value":0},{"value":4473611048,"symbolLocation":808,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":4473611024,"symbolLocation":784,"symbol":"thread_status"},{"value":4473611088,"symbolLocation":848,"symbol":"thread_status"},{"value":13550743776},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4473524224,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13550743360},"sp":{"value":13550743216},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}}},{"id":1945705,"name":"com.apple.NSEventThread","threadState":{"x":[{"value":268451845},{"value":17183031299},{"value":103079220499},{"value":479399954631683},{"value":125915556216832},{"value":479399954612224},{"value":64},{"value":0},{"value":18446744073709550527},{"value":111619},{"value":29317},{"value":1},{"value":111619},{"value":0},{"value":0},{"value":193514046488576},{"value":18446744073709551569},{"value":8462277376},{"value":0},{"value":0},{"value":64},{"value":479399954612224},{"value":125915556216832},{"value":479399954631683},{"value":13373377984},{"value":103079220499},{"value":17183031299},{"value":17183031299},{"value":3162115}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":536875008},"fp":{"value":13373377568},"sp":{"value":13373377488},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":37900,"symbol":"CGSSnarfAndDispatchDatagrams","symbolLocation":160,"imageIndex":165},{"imageOffset":3819940,"symbol":"SLSGetNextEventRecordInternal","symbolLocation":340,"imageIndex":165},{"imageOffset":1306924,"symbol":"SLEventCreateNextEvent","symbolLocation":16,"imageIndex":165},{"imageOffset":255584,"symbol":"PullEventsFromWindowServerOnConnection(unsigned
int, unsigned char,
__CFMachPortBoost*)","symbolLocation":64,"imageIndex":166},{"imageOffset":255460,"symbol":"MessageHandler(__CFMachPort*,
void*, long,
void*)","symbolLocation":60,"imageIndex":166},{"imageOffset":712596,"symbol":"__CFMachPortPerform","symbolLocation":248,"imageIndex":163},{"imageOffset":518764,"symbol":"__CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE1_PERFORM_FUNCTION__","symbolLocation":60,"imageIndex":163},{"imageOffset":518540,"symbol":"__CFRunLoopDoSource1","symbolLocation":524,"imageIndex":163},{"imageOffset":512848,"symbol":"__CFRunLoopRun","symbolLocation":2244,"imageIndex":163},{"imageOffset":508980,"symbol":"CFRunLoopRunSpecific","symbolLocation":608,"imageIndex":163},{"imageOffset":1458568,"symbol":"_NSEventThread","symbolLocation":144,"imageIndex":160},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945706,"name":"MemoryInfra","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":448613629034496},{"value":0},{"value":448613629034496},{"value":32},{"value":0},{"value":18446744073709550527},{"value":104451},{"value":0},{"value":1},{"value":104451},{"value":104195},{"value":1},{"value":1},{"value":18446744073709551569},{"value":13384036352},{"value":0},{"value":0},{"value":32},{"value":448613629034496},{"value":0},{"value":448613629034496},{"value":13384035392},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13384034736},"sp":{"value":13384034656},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70677152,"imageIndex":94},{"imageOffset":70343492,"imageIndex":94},{"imageOffset":70809656,"imageIndex":94},{"imageOffset":70544784,"imageIndex":94},{"imageOffset":70952276,"imageIndex":94},{"imageOffset":70952656,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":1945707,"name":"ThreadPoolSingleThreadSharedBackgroundBlocking2","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":467305326706688},{"value":0},{"value":467305326706688},{"value":32},{"value":0},{"value":18446744073709550527},{"value":108803},{"value":0},{"value":1},{"value":108803},{"value":2045},{"value":3527829731},{"value":227},{"value":18446744073709551569},{"value":419840},{"value":0},{"value":0},{"value":32},{"value":467305326706688},{"value":0},{"value":467305326706688},{"value":13482765616},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547475236},"cpsr":{"value":4096},"fp":{"value":13482764960},"sp":{"value":13482764880},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547399156},"far":{"value":0}},"frames":[{"imageOffset":4596,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":156},{"imageOffset":80676,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":156},{"imageOffset":40500,"symbol":"mach_msg_overwrite","symbolLocation":476,"imageIndex":156},{"imageOffset":5496,"symbol":"mach_msg","symbolLocation":24,"imageIndex":156},{"imageOffset":71161832,"imageIndex":94},{"imageOffset":70677284,"imageIndex":94},{"imageOffset":70900888,"imageIndex":94},{"imageOffset":70903324,"imageIndex":94},{"imageOffset":70902760,"imageIndex":94},{"imageOffset":71057880,"imageIndex":94},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":2542790,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":157}],"threadState":{"x":[{"value":13327577088},{"value":146487},{"value":13327040512},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":13327577088},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547643680},"far":{"value":0}}},{"id":2545372,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":157}],"threadState":{"x":[{"value":13324103680},{"value":93191},{"value":13323567104},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":13324103680},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547643680},"far":{"value":0}}},{"id":2545373,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":157}],"threadState":{"x":[{"value":13327003648},{"value":0},{"value":13326467072},{"value":0},{"value":278532},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":13327003648},"esr":{"value":0,"description":"
Address size
fault"},"pc":{"value":6547643680},"far":{"value":0}}},{"id":2545374,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":157}],"threadState":{"x":[{"value":13317943296},{"value":141103},{"value":13317406720},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":13317943296},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547643680},"far":{"value":0}}},{"id":2545410,"name":"Thread
(pooled)","threadState":{"x":[{"value":260},{"value":0},{"value":63744},{"value":0},{"value":0},{"value":160},{"value":29},{"value":999998000},{"value":13353938312},{"value":0},{"value":105553123731736},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":105553123731712},{"value":105553123731776},{"value":13353939168},{"value":999998000},{"value":29},{"value":63744},{"value":63745},{"value":64000},{"value":18446744072709551616},{"value":105553180034976}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13353938432},"sp":{"value":13353938288},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}},"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":2118156,"imageIndex":111},{"imageOffset":2117824,"symbol":"QWaitCondition::wait(QMutex*,
QDeadlineTimer)","symbolLocation":108,"imageIndex":111},{"imageOffset":2094896,"imageIndex":111},{"imageOffset":2063036,"imageIndex":111},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":2545411,"name":"Thread
(pooled)","threadState":{"x":[{"value":260},{"value":0},{"value":49408},{"value":0},{"value":0},{"value":160},{"value":29},{"value":999998000},{"value":13354511752},{"value":0},{"value":105553123730968},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":105553123730944},{"value":105553123731008},{"value":13354512608},{"value":999998000},{"value":29},{"value":49408},{"value":49409},{"value":49664},{"value":18446744072709551616},{"value":105553180035008}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13354511872},"sp":{"value":13354511728},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}},"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":2118156,"imageIndex":111},{"imageOffset":2117824,"symbol":"QWaitCondition::wait(QMutex*,
QDeadlineTimer)","symbolLocation":108,"imageIndex":111},{"imageOffset":2094896,"imageIndex":111},{"imageOffset":2063036,"imageIndex":111},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]},{"id":2545412,"name":"Thread
(pooled)","threadState":{"x":[{"value":260},{"value":0},{"value":58880},{"value":0},{"value":0},{"value":160},{"value":29},{"value":999998000},{"value":13362408840},{"value":0},{"value":105553123732504},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8462293216},{"value":0},{"value":105553123732480},{"value":105553123732544},{"value":13362409696},{"value":999998000},{"value":29},{"value":58880},{"value":58881},{"value":59136},{"value":18446744072709551616},{"value":4528979088}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6547666268},"cpsr":{"value":1610616832},"fp":{"value":13362408960},"sp":{"value":13362408816},"esr":{"value":1442840704,"description":"
Address size
fault"},"pc":{"value":6547413484},"far":{"value":0}},"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":156},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":157},{"imageOffset":2118156,"imageIndex":111},{"imageOffset":2117824,"symbol":"QWaitCondition::wait(QMutex*,
QDeadlineTimer)","symbolLocation":108,"imageIndex":111},{"imageOffset":2094896,"imageIndex":111},{"imageOffset":2063036,"imageIndex":111},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":157},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":157}]}],
"usedImages" : [
[deleted to fit within ticket limits]
],
"sharedCache" : {
"base" : 6543179776,
"size" : 4220698624,
"uuid" : "3406ad1b-2469-30eb-9863-5dce861e6dea"
},
"vmSummary" : "ReadOnly portion of Libraries: Total=1.6G resident=0K(0%)
swapped_out_or_unallocated=1.6G(100%)\nWritable regions: Total=3.6G
written=0K(0%) resident=0K(0%) swapped_out=0K(0%)
unallocated=3.6G(100%)\n\n VIRTUAL REGION
\nREGION TYPE SIZE COUNT (non-coalesced)
\n=========== ======= ======= \nAccelerate framework
256K 2 \nActivity Tracing 256K 1 \nCG
image 1248K 46 \nCG raster data
400K 8 \nColorSync 624K 31
\nCoreAnimation 4912K 295 \nCoreGraphics
144K 9 \nCoreServices 1152K 5 \nCoreUI
image data 5536K 38 \nFoundation
32K 2 \nKernel Alloc Once 32K 1 \nMALLOC
2.9G 120 \nMALLOC guard page 192K 12 \nMach
message 64K 2 \nOpenGL GLSL
384K 4 \nSTACK GUARD 592K 37 \nStack
192.3M 38 \nStack Guard 56.0M 1
\nVM_ALLOCATE 358.0M 334 \nVM_ALLOCATE
(reserved) 128.0M 2 reserved VM address space
(unallocated)\n__AUTH 3368K 569
\n__AUTH_CONST 40.9M 823 \n__CTF
824 1 \n__DATA 26.1M 973
\n__DATA_CONST 51.9M 986 \n__DATA_DIRTY
2901K 323 \n__FONT_DATA 2352 1
\n__GLSLBUILTINS 5174K 1 \n__INFO_FILTER
8 1 \n__LINKEDIT 563.3M 157 \n__OBJC_RO
71.9M 1 \n__OBJC_RW 2199K 1 \n__TEXT
1.1G 1004 \ndyld private memory 320K 4 \nmapped
file 536.8M 82 \nshared memory
3136K 22 \n=========== ======= ======= \nTOTAL
6.0G 5937 \nTOTAL, minus reserved VM space 5.9G 5937 \n",
"legacyInfo" : {
"threadTriggered" : {
"name" : "CrBrowserMain",
"queue" : "com.apple.main-thread"
}
},
"logWritingSignature" : "ce87754ee6e0f37f36c310b91bcfc2934b937bc2",
"trialInfo" : {
"rollouts" : [
{
"rolloutId" : "5ffde50ce2aacd000d47a95f",
"factorPackIds" : {
},
"deploymentId" : 240000454
},
{
"rolloutId" : "639124e81d92412bfb4880b3",
"factorPackIds" : {
},
"deploymentId" : 240000012
}
],
"experiments" : [
]
}
}
===== Log before crash start =====
UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
> open /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession.cxs
Log from Fri Jan 24 15:51:19 2025UCSF ChimeraX version: 1.9rc202412032254
(2024-12-03)
© 2016-2024 Regents of the University of California. All rights reserved.
> open /Users/gozorows/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/TSRI/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#1.cxs
Log from Fri Jan 24 13:21:31 2025 Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation
/Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
Chain information for Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1
---
Chain | Description
A | No description available
B | No description available
C | No description available
H | No description available
L | No description available
> open /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation
/Q12BBM-069_BG505_P455_J2029_C1_3.3.mrc
Opened Q12BBM-069_BG505_P455_J2029_C1_3.3.mrc as #2, grid size
400,400,400,
pixel 1.03, shown at level 0.0501, step 2, values float32
> close #2
> open /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation
/Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb
Chain information for Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb
#2
---
Chain | Description
A | No description available
B | No description available
C | No description available
H | No description available
L | No description available
> open /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation
/Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb
Chain information for Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb
#3
---
Chain | Description
A | No description available
B | No description available
C | No description available
H | No description available
L | No description available
> open 7T77 fromDatabase pdb format mmcif
7t77 title:
HIV-1 Envelope ApexGT3.N130 in complex with PG9 Fab [more info...]
Chain information for 7t77 #4
---
Chain | Description
A C E | HIV Envelope ApexGT3.N130 gp120
B D F | HIV Envelope ApexGT3.N130 gp41
H | PG9 Fab Heavy Chain
L | PG9 Fab Light Chain
Non-standard residues in 7t77 #4
---
BMA — beta-D-mannopyranose (beta-D-mannose; D-mannose; mannose)
MAN — alpha-D-mannopyranose (alpha-D-mannose; D-mannose; mannose)
NAG — 2-acetamido-2-deoxy-beta-D-glucopyranose (N-acetyl-
beta-D-glucosamine;
2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose;
2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE)
> hide atoms
> show cartoons
> ui tool show Matchmaker
> matchmaker #!2-4 to #1/H pairing bs
Computing secondary structure
[Repeated 3 time(s)] Parameters
---
Chain pairing | bs
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1)
with
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain H (#2),
sequence
alignment score = 434.3
RMSD between 115 pruned atom pairs is 0.673 angstroms; (across all 127
pairs:
1.856)
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1)
with
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain H (#3),
sequence
alignment score = 441.6
RMSD between 111 pruned atom pairs is 0.642 angstroms; (across all 127
pairs:
1.946)
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1)
with
7t77, chain H (#4), sequence alignment score = 299.2
RMSD between 104 pruned atom pairs is 0.956 angstroms; (across all 123
pairs:
2.666)
> hide #!3 models
> hide #!2 models
> hide #!1 models
> show #!3 models
> hide #!3 models
> hide #!4 models
> show #!3 models
> show #!2 models
> show #!1 models
> open /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc
> lighting soft
> hide atoms
> set bgColor #ffffff00
> graphics silhouettes true width 1.5
> camera ortho
> setattr g display false
Assigning display attribute to 4 items
> cartoon style width 1 thickness 1
> cartoon suppressBackboneDisplay true
> show cartoons
> style stick
Changed 65146 atom styles
> color #1/L #b188a7
> color #1/H #6a64a5
> color /C tan
> color #1/B #72a27e
> color #1/A #a7a7a7
> color :NAG,NAM,BMA,MAN blue
executed base_coloring.cxc
> hide #!3 models
> hide #!2 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!1 models
> show #!1 models
> hide #!4 models
> ui tool show Matchmaker
> matchmaker #4/E to #1/B pairing ss
Computing secondary structure
[Repeated 1 time(s)] Parameters
---
Chain pairing | ss
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain B (#1)
with
7t77, chain E (#4), sequence alignment score = 1812.7
RMSD between 395 pruned atom pairs is 0.868 angstroms; (across all 442
pairs:
1.619)
> show #!4 models
> matchmaker #!1-3 to #4/E pairing bs
Computing secondary structure
[Repeated 3 time(s)] Parameters
---
Chain pairing | bs
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker 7t77, chain E (#4) with
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain C (#1), sequence
alignment score = 1853.8
RMSD between 388 pruned atom pairs is 0.920 angstroms; (across all 442
pairs:
1.596)
Matchmaker 7t77, chain E (#4) with
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain C (#2),
sequence
alignment score = 1972.2
RMSD between 396 pruned atom pairs is 0.857 angstroms; (across all 433
pairs:
1.202)
Matchmaker 7t77, chain E (#4) with
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain B (#3),
sequence
alignment score = 1924.9
RMSD between 394 pruned atom pairs is 0.930 angstroms; (across all 425
pairs:
1.266)
> matchmaker #!2-3 to #1/H pairing bs
Computing secondary structure
[Repeated 2 time(s)] Parameters
---
Chain pairing | bs
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1)
with
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain H (#2),
sequence
alignment score = 434.3
RMSD between 115 pruned atom pairs is 0.673 angstroms; (across all 127
pairs:
1.856)
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1)
with
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain H (#3),
sequence
alignment score = 441.6
RMSD between 111 pruned atom pairs is 0.642 angstroms; (across all 127
pairs:
1.946)
> matchmaker #4/E to #1/B pairing ss
Computing secondary structure
[Repeated 1 time(s)] Parameters
---
Chain pairing | ss
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain B (#1)
with
7t77, chain E (#4), sequence alignment score = 1812.7
RMSD between 395 pruned atom pairs is 0.868 angstroms; (across all 442
pairs:
1.619)
> hide #!4 models
> ui tool show "Side View"
> select #1 /H:64,32,58,199J
25 atoms, 22 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /H:64,32,58,100J
33 atoms, 29 bonds, 4 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /H
998 atoms, 1023 bonds, 127 residues, 1 model selected
> hide sel atoms
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J
68 atoms, 68 bonds, 7 residues, 1 model selected
> show sel atoms
> color sel byhetero
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /L
863 atoms, 886 bonds, 110 residues, 1 model selected
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163,
167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> show sel atoms
> select clear
> color #!1 byhetero
> select #B :158-196
Expected an objects specifier or a keyword
> select #1 /B :158-196
340 atoms, 345 bonds, 40 residues, 1 model selected
> select clear
> select #1 /H :31, 100B
22 atoms, 21 bonds, 2 residues, 1 model selected
> select #1 /H :31, 100B #1 /C :185, 169
41 atoms, 38 bonds, 4 residues, 1 model selected
> show sel atoms
> select #1 /H :100B #1 /A :160, 169
35 atoms, 33 bonds, 3 residues, 1 model selected
> hide sel atoms
> show sel atoms
> select clear
> ui tool show Distances
Exactly two atoms must be selected!
> select #1/A:169@NH1
1 atom, 1 residue, 1 model selected
> select #1/H:100B@O2
1 atom, 1 residue, 1 model selected
> select #1/A:169@NH1
1 atom, 1 residue, 1 model selected
> select add #1/H:100B@O2
2 atoms, 2 residues, 1 model selected
> distance #1/A:169@NH1 #1/H:100B@O2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ARG
169
NH1 and /H TYS 100B O2: 3.318Å
> select add #1/A:160@ND2
3 atoms, 3 residues, 1 model selected
> select subtract #1/H:100B@O2
2 atoms, 2 residues, 1 model selected
> distance #1/A:169@NH1 #1/A:160@ND2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ARG
169
NH1 and ASN 160 ND2: 3.304Å
> ~distance #1/A:169@NH1 #1/A:160@ND2
> select clear
> select #1/A:160@ND2
1 atom, 1 residue, 1 model selected
> select add #1/H:100B@O2
2 atoms, 2 residues, 1 model selected
> distance #1/A:160@ND2 #1/H:100B@O2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN
160
ND2 and /H TYS 100B O2: 3.314Å
> select subtract #1/H:100B
1 atom, 1 residue, 1 model selected
> select add #1/C:169@NH1
2 atoms, 2 residues, 1 model selected
> distance #1/A:160@ND2 #1/C:169@NH1
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN
160
ND2 and /C ARG 169 NH1: 14.345Å
> ~distance #1/A:160@ND2 #1/C:169@NH1
> select clear
> select add #1/H:100B
16 atoms, 16 bonds, 1 residue, 1 model selected
> select add #1/C:169@NH1
17 atoms, 16 bonds, 2 residues, 1 model selected
Exactly two atoms must be selected!
> select #1 /H :100B O #1 /C :169 NH1
Expected a keyword
> select #1 /H :100B O, #1 /C :169 NH1
Expected a keyword
> select #1 /H :100B O
Expected a keyword
> select #1 /H :100B @O
1 atom, 1 residue, 1 model selected
> select #1 /H :100B @O #1 /C :169 @NH1
2 atoms, 2 residues, 1 model selected
> distance #1/H:100B@O #1/C:169@NH1
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS
100B O and /C ARG 169 NH1: 2.954Å
> select clear
> hide #5.1 models
> show #!1 atoms
> hide #!1 atoms
> select #1 /H :31, 100B #1 /C :185, 169
41 atoms, 38 bonds, 1 pseudobond, 4 residues, 2 models selected
> show sel atoms
> select up
232 atoms, 234 bonds, 1 pseudobond, 28 residues, 2 models selected
> select up
4916 atoms, 5055 bonds, 1 pseudobond, 603 residues, 2 models selected
> select up
4935 atoms, 5074 bonds, 1 pseudobond, 605 residues, 2 models selected
> select clear
> select #1 /H :100B #1 /A :160, 169
35 atoms, 33 bonds, 2 pseudobonds, 3 residues, 2 models selected
> show sel atoms
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163,
167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J
68 atoms, 68 bonds, 7 residues, 1 model selected
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163,
167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> select clear
> select down
Nothing selected
> select down
Nothing selected
> select #1 /C :166
11 atoms, 10 bonds, 1 residue, 1 model selected
> show sel atoms
> select clear
> select #1 /C :166
11 atoms, 10 bonds, 1 residue, 1 model selected
> select clear
> select #1 /A :166
11 atoms, 10 bonds, 1 residue, 1 model selected
> select #1 :166
33 atoms, 30 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> select #1 :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> select clear
> select #1 :169
33 atoms, 30 bonds, 3 residues, 1 model selected
> select clear
> select ~sel & ##selected
Nothing selected
> select #1 :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> select clear
> view clip false
[Repeated 1 time(s)]
> view name TYR100B
> view list
Named views: TYR100B
> view TYR100B
[Repeated 1 time(s)]
Unsupported scale factor (0.000000) detected on Display0
[Repeated 1 time(s)]
QPainter::begin: Paint device returned engine == 0, type: 2
QPainter::translate: Painter not active
QPainter::setPen: Painter not active
QPainter::setBrush: Painter not active
QPainter::drawPoints: Painter not active
QPainter::end: Painter not active, aborted
QPainter::begin: Paint device returned engine == 0, type: 2
QPainter::translate: Painter not active
QPainter::setPen: Painter not active
QPainter::setBrush: Painter not active
QPainter::drawPoints: Painter not active
QPainter::end: Painter not active, aborted
Unsupported scale factor (0.000000) detected on Display0
[Repeated 4 time(s)]
> view TYR100B
[Repeated 1 time(s)]
> view name TYR100B
> view TYR100B
> save /Users/sphulera/Desktop/image46.png supersample 3
> save /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3.cxs
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> select add #2
15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected
> show sel atoms
> color (#!2 & sel) byhetero
> select clear
> show #!1 models
> hide #!2 models
> show #!2 models
> color #2 /L #b188a7
> color #2 /H #6a64a5
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> open /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc
> lighting soft
> hide atoms
> set bgColor #ffffff00
> graphics silhouettes true width 1.5
> camera ortho
> setattr g display false
Assigning display attribute to 5 items
> cartoon style width 1 thickness 1
> cartoon suppressBackboneDisplay true
> show cartoons
> style stick
Changed 65146 atom styles
> color #1/L #b188a7
> color #1/H #6a64a5
> color /C tan
> color #1/B #72a27e
> color #1/A #a7a7a7
> color :NAG,NAM,BMA,MAN blue
executed base_coloring.cxc
> hide #!2 models
> show #!2 models
> hide #!1 models
> open /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc
> lighting soft
> hide atoms
> set bgColor #ffffff00
> graphics silhouettes true width 1.5
> camera ortho
> setattr g display false
Assigning display attribute to 5 items
> cartoon style width 1 thickness 1
> cartoon suppressBackboneDisplay true
> show cartoons
> style stick
Changed 65146 atom styles
> color /L #b188a7
> color /H #6a64a5
> color /C tan
> color /B #72a27e
> color /A #a7a7a7
> color :NAG,NAM,BMA,MAN blue
executed base_coloring.cxc
> show #!1 models
> show #!3 models
> hide #!3 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> view TYR100B
> select add #2
15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected
> show sel atoms
> color (#!2 & sel) byelement
> select clear
> color :NAG, NAM, BMA blue
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> hide #!2 atoms
> show #!1 models
> hide #!2 models
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163,
167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> show sel atoms
> color sel byhetero
> select clear
> select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163,
167,
> 169, 170, 171, 306, 166, 169, 173
141 atoms, 137 bonds, 15 residues, 1 model selected
> select #1 /H :100B #1 /A :160, 169
35 atoms, 33 bonds, 2 pseudobonds, 3 residues, 2 models selected
> show sel atoms
> color (#!1 & sel) byhetero
> show #!5 models
> select #1 /H :31, 100B #1 /C :185, 169
41 atoms, 38 bonds, 1 pseudobond, 4 residues, 2 models selected
> show sel atoms
> color (#!1 & sel) byelement
> select clear
> color /C tan
> color #!1,5 byhetero
> select clear
> hide #!1 models
> show #!2 models
> show #!1 models
> hide #!1 models
> show atoms #2 /H :53
Expected ',' or a keyword
> show #2 /H :53
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56
> color /H #6a64a5
> color /H byelement #6a64a5
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> color /H byelement atoms #6a64a5
Expected ',' or a keyword
> color byelement /H #6a64a5
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> color byelement /H
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> color #!2,5 byhetero
> color /H byhetero
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56 #2 /B :163,167,169,
> 170, 171, 168, 169, 171, 305
> color #2 byhetero
> select clear
> color #!2,5 byhetero
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56 #2 /B :163,167,169,
> 170, 171, 168, 169, 171, 305
> color #!2,5 byhetero
> select add #2
15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected
> color (#!2 & sel) byhetero
> select clear
> color /L #b188a7
> color /H #6a64a5
> color /C tan
> color /B #72a27e
> color /A #a7a7a7
> color #!2,5 byhetero
> view list
Named views: TYR100B
> view TYR100B
> show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56, 64, 100E, 100L, 58
#2
> /B :163,167,169, 170, 171, 168, 169, 171, 305, 322, 305
> distance #2 /H :100E @OD1 #2 /B :169
Expected exactly two atoms and/or measurable objects (e.g. axes, planes),
or
one or more measurable objects and one or more atoms, got 10 atoms and 0
measurable objects
> distance #2 /H :100E @OD1 #2 /B :169 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H
ASP
100E OD1 and /B LYS 169 NZ: 4.244Å
> distance #2 /H :100E @OD1 #2 /B :171 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H
ASP
100E OD1 and /B LYS 171 NZ: 18.040Å
> ~distance #2/H:100E@OD1 #2/B:169@NZ
> distance #2 /H :100L @OD1 #2 /B :171 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H
ASP
100L OD1 and /B LYS 171 NZ: 3.182Å
> ~distance #2/H:100L@OD1 #2/B:171@NZ
> ~distance #2/H:100E@OD1 #2/B:171@NZ
> distance #2 /H :100L @OD1 #2 /B :171 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H
ASP
100L OD1 and /B LYS 171 NZ: 3.182Å
> distance #2 /H :100E @OD2 #2 /B :169 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H
ASP
100E OD2 and /B LYS 169 NZ: 3.026Å
> distance #2 /H :58E @OD1 #2 /B :305 @NZ
Expected exactly two atoms and/or measurable objects (e.g. axes, planes),
or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> distance #2 /H :58 @OD1 #2 /B :305 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H
ASP
58 OD1 and /B LYS 305 NZ: 3.766Å
> ~distance #1/H:100B@O #1/C:169@NH1
> distance #2 /H :58 @OD1 #2 /B :305 @NZ
Distance already exists; modify distance properties with 'distance style'
> distance #2 /H :100C @OE1 #2 /A :169 @NZ
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H
GLU
100C OE1 and /A LYS 169 NZ: 3.024Å
> show #2 /H :100C #2 /A :169
> show #2 /H :100C #2 /A :169
> select clear
> select :169
120 atoms, 108 bonds, 12 residues, 4 models selected
> show sel & #!2 atoms
> select clear
> select :160
96 atoms, 84 bonds, 12 residues, 4 models selected
> list view
Unknown command: list view
> view list
Named views: TYR100B
> view TYR100B
> select clear
> save /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#2.cxs
> save /Users/sphulera/Desktop/image47.png supersample 3
> show #!1 models
> hide #!2 models
> color #!1,5 byhetero
> save /Users/sphulera/Library/CloudStorage/OneDrive-
>
TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#1.cxs
——— End of log from Fri Jan 24 13:21:31 2025 ———
opened ChimeraX session
> ui tool show "Side View"
> show #!2 models
> hide #!1 models
> ui tool show H-Bonds
> hbonds reveal true
12911 hydrogen bonds found
> hbonds intraModel false intraRes false reveal true
6753 hydrogen bonds found
> select #2:MAN:NAG:BMA:FUC
971 atoms, 994 bonds, 73 residues, 1 model selected
> color sel lime
> color sel yellow
> select clear
> hide #!2 models
> show #!1 models
> select #1:MAN:NAG:BMA:FUC
1137 atoms, 1169 bonds, 84 residues, 1 model selected
> show sel atoms
> color sel yellow
> select #1/L:53
6 atoms, 5 bonds, 1 residue, 1 model selected
> select #1/B:160
8 atoms, 7 bonds, 1 residue, 1 model selected
> show sel atoms
> select clear
> select #1/C:160
8 atoms, 7 bonds, 1 residue, 1 model selected
> show sel atoms
> show #!3 models
> hide #!1 models
> select #3:MAN:NAG:BMA:FUC
877 atoms, 899 bonds, 65 residues, 1 model selected
> show sel atoms
> color sel yellow
> style sel sphere
Changed 877 atom styles
> select clear
> select #3 &~ #3:MAN:NAG:BMA:FUC
14917 atoms, 15255 bonds, 19 pseudobonds, 1896 residues, 2 models selected
> hide sel atoms
> select clear
> save "/Users/gozorows/OneDrive - The Scripps Research
>
Institute/TSRI/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession.cxs"
——— End of log from Fri Jan 24 15:51:19 2025 ———
opened ChimeraX session
> show #!4 models
> hide #!3 models
> show #!3 models
> hide #!3 models
> show #!3 models
> hide #!3 models
> select :NAG, NAM, BMA
4074 atoms, 4169 bonds, 439 pseudobonds, 297 residues, 5 models selected
> style sel & #!4 sphere
Changed 1320 atom styles
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> style sel & #!4 sphere
Changed 1419 atom styles
> select clear
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> color (#!4 & sel) yellow
> select clear
> show #!3 models
> hide #!4 models
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> hide sel & #!3 atoms
> show #!4 models
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> hide sel & #!3-4 atoms
> select clear
> hide #!5 models
> hide #6 models
> hide #!3 models
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> ui tool show H-Bonds
> hbonds sel interModel false distSlop 2.0 intraMol false intraRes false
> reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb
3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb
4 7t77
273 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no
hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no
hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no
hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no
hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no
hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no
hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no
hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no
hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no
hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no
hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no
hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no
hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no
hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no
hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no
hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no
hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no
hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no
hydrogen 3.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 135 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no
hydrogen 3.432 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 135 OG1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no
hydrogen 2.973 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 136 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no
hydrogen 4.422 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 155 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 720 O5 no
hydrogen 4.201 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 169 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 702 O6 no
hydrogen 3.176 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 208 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A MAN 736 O6 no
hydrogen 3.284 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 235 OG1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O5 no
hydrogen 4.248 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 251 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O5 no
hydrogen 4.381 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 294 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 O7 no
hydrogen 4.181 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 307 NH1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 no
hydrogen 4.612 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 307 NH2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 no
hydrogen 4.800 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 331 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O7 no
hydrogen 4.787 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 362 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O4 no
hydrogen 5.247 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A GLY 378 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O3 no
hydrogen 4.757 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 387 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O5 no
hydrogen 4.667 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 387 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O4 no
hydrogen 4.738 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 412 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O7 no
hydrogen 4.280 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 414 OG1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 O5 no
hydrogen 4.656 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 443 NH2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O5 no
hydrogen 2.930 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O3 no
hydrogen 4.457 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O4 no
hydrogen 5.614 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O5 no
hydrogen 5.557 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O6 no
hydrogen 5.053 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A VAL 445 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O4 no
hydrogen 4.483 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A VAL 445 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O7 no
hydrogen 3.947 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 612 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 741 O6 no
hydrogen 3.240 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 702 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 160 OD1 no
hydrogen 4.772 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A HIS 329 NE2 no
hydrogen 3.156 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 726 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 740 O7 no
hydrogen 3.585 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASP 321 OD1 no
hydrogen 5.115 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASP 321 OD2 no
hydrogen 4.393 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 235 O no
hydrogen 4.514 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A PRO 237 O no
hydrogen 5.107 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 446 OG no
hydrogen 3.566 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A GLU 210 OE2 no
hydrogen 3.983 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A MAN 736 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 208 OG no
hydrogen 3.284 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 363 O no
hydrogen 3.898 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O7 no
hydrogen 4.530 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O7 no
hydrogen 4.653 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 741 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 612 OG no
hydrogen 3.240 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 NE2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O7 no
hydrogen 4.081 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 151 NE
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O7 no
hydrogen 4.097 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 151 NH2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O7 no
hydrogen 4.741 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B TYR 173 OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 no
hydrogen 4.764 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 189 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 721 O3 no
hydrogen 4.564 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 234 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 N2 no
hydrogen 4.440 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 236 OG1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 O5 no
hydrogen 4.564 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 295 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no
hydrogen 4.211 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ILE 323 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 no
hydrogen 3.934 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 332 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O7 no
hydrogen 4.451 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 388 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O6 no
hydrogen 3.244 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 413 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O7 no
hydrogen 4.058 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 413 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O5 no
hydrogen 4.964 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 415 OG1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O5 no
hydrogen 4.375 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NE
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no
hydrogen 4.034 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O5 no
hydrogen 4.253 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O5 no
hydrogen 2.957 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no
hydrogen 3.647 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O3 no
hydrogen 3.751 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O5 no
hydrogen 4.891 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O6 no
hydrogen 4.186 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B VAL 446 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O4 no
hydrogen 4.465 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B VAL 446 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O7 no
hydrogen 4.864 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH no
hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 197 O no
hydrogen 5.021 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 197 OD1 no
hydrogen 4.555 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 293 OE1 no
hydrogen 3.241 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B HIS 330 NE2 no
hydrogen 3.205 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 721 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLY 152 O no
hydrogen 4.951 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 262 OD1 no
hydrogen 3.220 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 448 OD1 no
hydrogen 4.270 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O5 no
hydrogen 4.061 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 O no
hydrogen 3.666 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 135 O no
hydrogen 3.559 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B TYR 173 OH no
hydrogen 4.764 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLY 321 O no
hydrogen 4.744 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ILE 323 O no
hydrogen 4.949 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 OD1 no
hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 744 O3 no
hydrogen 4.646 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG no
hydrogen 2.808 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 OD1 no
hydrogen 3.166 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 O no
hydrogen 3.729 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 236 O no
hydrogen 4.343 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 377 O no
hydrogen 4.977 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLU 211 OE2 no
hydrogen 4.991 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 O no
hydrogen 5.042 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B BMA 738 O2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLU 211 OE1 no
hydrogen 5.142 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O7 no
hydrogen 3.107 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 no
hydrogen 3.587 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 388 OG no
hydrogen 3.244 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 no
hydrogen 4.497 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O3 no
hydrogen 3.587 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O5 no
hydrogen 4.659 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O6 no
hydrogen 4.497 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O5 no
hydrogen 4.243 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 744 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O3 no
hydrogen 4.646 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B BMA 746 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 748 O5 no
hydrogen 4.487 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 747 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 46 OE1 no
hydrogen 5.126 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 130 NE2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O7 no
hydrogen 4.559 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 158 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O6 no
hydrogen 4.213 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 198 OG1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O5 no
hydrogen 4.689 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C LYS 252 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O5 no
hydrogen 4.833 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 279 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 738 O5 no
hydrogen 3.820 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 295 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O7 no
hydrogen 4.723 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 332 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O7 no
hydrogen 4.455 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 363 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 O4 no
hydrogen 4.375 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLY 379 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3 no
hydrogen 4.978 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O7 no
hydrogen 4.765 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 741 O5 no
hydrogen 3.388 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 413 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O7 no
hydrogen 4.399 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 413 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O5 no
hydrogen 5.001 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 415 OG1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O6 no
hydrogen 4.524 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ARG 444 NH2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O6 no
hydrogen 2.905 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C VAL 446 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O4 no
hydrogen 4.178 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 160 OD1 no
hydrogen 4.753 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE1 no
hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no
hydrogen 4.183 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 197 O no
hydrogen 4.730 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 197 OD1 no
hydrogen 4.557 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 293 OE1 no
hydrogen 3.282 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 415 OG1 no
hydrogen 4.524 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6 no
hydrogen 4.963 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 729 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 88 OD1 no
hydrogen 2.881 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASP 322 OD2 no
hydrogen 4.764 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 743 O5 no
hydrogen 2.989 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 743 O7 no
hydrogen 2.443 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 158 OG no
hydrogen 4.213 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no
hydrogen 4.370 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no
hydrogen 3.602 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no
hydrogen 2.872 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no
hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2 no
hydrogen 4.039 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no
hydrogen 4.666 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O6 no
hydrogen 4.352 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no
hydrogen 3.794 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no
hydrogen 2.884 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 no
hydrogen 4.039 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no
hydrogen 4.323 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no
hydrogen 2.931 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no
hydrogen 2.870 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ILE 97 O no
hydrogen 3.751 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 101 OD2 no
hydrogen 4.400 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no
hydrogen 4.837 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 no
hydrogen 4.352 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 734 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 236 OG1 no
hydrogen 4.864 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE2 no
hydrogen 3.916 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 377 O no
hydrogen 4.413 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE1 no
hydrogen 4.145 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE2 no
hydrogen 4.790 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 736 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ARG 444 O no
hydrogen 4.469 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG no
hydrogen 4.447 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 364 O no
hydrogen 3.722 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O3 no
hydrogen 4.963 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O7 no
hydrogen 5.150 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2 no
hydrogen 4.370 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H VAL 2 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 no
hydrogen 4.774 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no
hydrogen 3.307 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no
hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 no
hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O5 no
hydrogen 4.887 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 no
hydrogen 3.632 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 no
hydrogen 4.886 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O6 no
hydrogen 3.786 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O4 no
hydrogen 3.574 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O5 no
hydrogen 4.918 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no
hydrogen 4.514 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 52 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O6 no
hydrogen 4.679 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 no
hydrogen 3.017 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O5 no
hydrogen 4.351 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 N2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C ASP 167 OD2 no
hydrogen 4.725 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no
hydrogen 4.914 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE2 no
hydrogen 4.749 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ASP 167 OD2 no
hydrogen 4.751 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH no
hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 OD1 no
hydrogen 2.873 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no
hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG no
hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no
hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 O no
hydrogen 5.053 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no
hydrogen 2.904 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 N2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no
hydrogen 4.624 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH no
hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O3
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no
hydrogen 3.659 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no
hydrogen 5.152 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no
hydrogen 3.734 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no
hydrogen 2.874 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 62 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O6 no
hydrogen 4.891 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 98 NH1
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 no
hydrogen 4.263 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O5 no
hydrogen 4.369 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 no
hydrogen 4.788 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 O4 no
hydrogen 3.821 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 no
hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 no
hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 no
hydrogen 3.011 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O5 no
hydrogen 4.876 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 no
hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 no
hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 31 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no
hydrogen 4.157 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O4 no
hydrogen 3.878 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O7 no
hydrogen 4.344 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 no
hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no
hydrogen 4.745 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O4 no
hydrogen 2.941 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no
hydrogen 4.593 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 67 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no
hydrogen 3.874 N/A
7t77 #4/E ARG 308 NH1
7t77 #4/S NAG 1 O7 no
hydrogen 2.971 N/A
7t77 #4/E ARG 308 NH2
7t77 #4/S NAG 1 O7 no
hydrogen 3.095 N/A
7t77 #4/H SER 74 N
7t77 #4/j MAN 5 O6 no
hydrogen 3.135 N/A
7t77 #4/H SER 74 OG
7t77 #4/j MAN 5 O4 no
hydrogen 4.355 N/A
7t77 #4/H SER 74 OG
7t77 #4/j MAN 5 O6 no
hydrogen 3.762 N/A
7t77 #4/H ARG 100B NE
7t77 #4/h NAG 1 O6 no
hydrogen 2.959 N/A
7t77 #4/H ARG 100B NH2
7t77 #4/h NAG 1 O5 no
hydrogen 3.418 N/A
7t77 #4/H ARG 100B NH2
7t77 #4/h NAG 1 O6 no
hydrogen 2.953 N/A
7t77 #4/H ASN 100F ND2
7t77 #4/X NAG 1 O7 no
hydrogen 5.183 N/A
7t77 #4/H TYR 100K OH
7t77 #4/j NAG 1 O4 no
hydrogen 4.788 N/A
7t77 #4/H TYR 100K OH
7t77 #4/j NAG 2 O3 no
hydrogen 4.518 N/A
7t77 #4/H ASN 100P N
7t77 #4/h MAN 5 O3 no
hydrogen 4.984 N/A
7t77 #4/H ASN 100P ND2
7t77 #4/h MAN 5 O4 no
hydrogen 2.860 N/A
7t77 #4/H HIS 100R ND1
7t77 #4/h MAN 6 O3 no
hydrogen 3.359 N/A
7t77 #4/H HIS 100R ND1
7t77 #4/h MAN 6 O4 no
hydrogen 3.351 N/A
7t77 #4/H HIS 100R NE2
7t77 #4/h MAN 5 O4 no
hydrogen 3.440 N/A
7t77 #4/L SER 32 OG
7t77 #4/h MAN 6 O3 no
hydrogen 2.926 N/A
7t77 #4/L SER 56 N
7t77 #4/X BMA 3 O3 no
hydrogen 5.008 N/A
7t77 #4/L SER 56 OG
7t77 #4/X BMA 3 O2 no
hydrogen 4.789 N/A
7t77 #4/L SER 56 OG
7t77 #4/X BMA 3 O3 no
hydrogen 3.927 N/A
7t77 #4/X BMA 3 O2
7t77 #4/L SER 56 OG no
hydrogen 4.789 N/A
7t77 #4/X BMA 3 O3
7t77 #4/L SER 56 OG no
hydrogen 3.927 N/A
7t77 #4/X BMA 3 O4
7t77 #4/L SER 56 OG no
hydrogen 4.978 N/A
7t77 #4/h NAG 1 O6
7t77 #4/H ASP 100 OD2 no
hydrogen 4.044 N/A
7t77 #4/h NAG 1 O6
7t77 #4/H TYS 100G O2 no
hydrogen 4.935 N/A
7t77 #4/h NAG 2 N2
7t77 #4/H ASP 100 OD2 no
hydrogen 4.837 N/A
7t77 #4/h MAN 4 O2
7t77 #4/L SER 32 OG no
hydrogen 3.818 N/A
7t77 #4/h MAN 5 O4
7t77 #4/H HIS 100R NE2 no
hydrogen 3.440 N/A
7t77 #4/h MAN 6 O2
7t77 #4/L GLU 31 O no
hydrogen 4.821 N/A
7t77 #4/h MAN 6 O3
7t77 #4/H TYR 100Q O no
hydrogen 4.294 N/A
7t77 #4/h MAN 6 O3
7t77 #4/H HIS 100R ND1 no
hydrogen 3.359 N/A
7t77 #4/h MAN 6 O3
7t77 #4/L SER 32 OG no
hydrogen 2.926 N/A
7t77 #4/h MAN 6 O3
7t77 #4/L ASP 50 OD2 no
hydrogen 3.718 N/A
7t77 #4/h MAN 6 O4
7t77 #4/H ASN 100P O no
hydrogen 3.545 N/A
7t77 #4/h MAN 6 O4
7t77 #4/H TYR 100Q O no
hydrogen 2.714 N/A
7t77 #4/h MAN 6 O4
7t77 #4/H HIS 100R ND1 no
hydrogen 3.351 N/A
7t77 #4/h MAN 6 O6
7t77 #4/H TYR 100Q O no
hydrogen 4.679 N/A
7t77 #4/h MAN 6 O6
7t77 #4/L ASP 50 OD1 no
hydrogen 3.389 N/A
7t77 #4/j NAG 2 N2
7t77 #4/H TYR 100K OH no
hydrogen 2.783 N/A
7t77 #4/j NAG 2 O3
7t77 #4/H TYR 100K OH no
hydrogen 4.518 N/A
7t77 #4/j BMA 3 O2
7t77 #4/H GLY 54 O no
hydrogen 4.057 N/A
7t77 #4/j MAN 5 O2
7t77 #4/H ARG 71 O no
hydrogen 5.083 N/A
7t77 #4/j MAN 5 O4
7t77 #4/H ASP 72 OD1 no
hydrogen 3.091 N/A
7t77 #4/j MAN 5 O4
7t77 #4/H SER 74 OG no
hydrogen 4.355 N/A
7t77 #4/j MAN 5 O6
7t77 #4/H ASP 72 OD1 no
hydrogen 2.858 N/A
7t77 #4/j MAN 5 O6
7t77 #4/H SER 74 OG no
hydrogen 3.762 N/A
273 hydrogen bonds found
> select clear
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> color (#!4 & sel) byhetero
> select clear
> hide #!4 models
> show #!4 models
> show #!3 models
> hide #!4 models
> show #!1 models
> hide #!3 models
> select /H,L
7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected
> hide sel & #!1 atoms
> hbonds sel interModel false distSlop 2.0 intraMol false intraRes false
> reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb
3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb
4 7t77
305 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O2 no
hydrogen 3.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no
hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no
hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 158 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no
hydrogen 3.190 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 no
hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE2 no
hydrogen 5.106 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 O no
hydrogen 4.793 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 32 OD1 no
hydrogen 2.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE1 no
hydrogen 4.195 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E O no
hydrogen 2.894 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG no
hydrogen 4.810 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 NE
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100F OH no
hydrogen 3.847 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD1 no
hydrogen 2.460 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no
hydrogen 3.284 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no
hydrogen 2.527 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD2 no
hydrogen 3.110 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no
hydrogen 4.536 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG no
hydrogen 4.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 189 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 O no
hydrogen 3.911 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H THR 57 O no
hydrogen 4.539 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 58 OD1 no
hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no
hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no
hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no
hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no
hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no
hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no
hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no
hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no
hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no
hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no
hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no
hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ARG 169 NH1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100D OH no
hydrogen 3.779 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no
hydrogen 4.851 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no
hydrogen 4.640 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no
hydrogen 5.017 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no
hydrogen 2.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 33 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 170 OE1 no
hydrogen 3.642 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no
hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no
hydrogen 3.729 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no
hydrogen 4.588 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no
hydrogen 4.208 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 50 NH2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 O no
hydrogen 2.427 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no
hydrogen 3.676 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no
hydrogen 3.726 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no
hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASN 56 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 306 O no
hydrogen 3.199 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LYS 64 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ILE 323 O no
hydrogen 4.809 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no
hydrogen 3.005 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no
hydrogen 3.854 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no
hydrogen 2.874 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 100H N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no
hydrogen 4.086 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no
hydrogen 4.866 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no
hydrogen 2.822 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 OE1 no
hydrogen 5.022 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no
hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no
hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no
hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no
hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no
hydrogen 3.808 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no
hydrogen 3.201 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no
hydrogen 4.990 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no
hydrogen 4.790 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no
hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no
hydrogen 2.623 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no
hydrogen 3.107 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no
hydrogen 3.957 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 160 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100C OE2 no
hydrogen 3.415 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 166 NH2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD2 no
hydrogen 5.159 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 169 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100C OE1 no
hydrogen 3.024 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 132 OG1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 O no
hydrogen 4.886 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 27 OE1 no
hydrogen 4.014 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 158 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 O no
hydrogen 2.820 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 158 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 OD1 no
hydrogen 2.681 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 166 NH1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD1 no
hydrogen 5.030 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 168 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1 no
hydrogen 3.856 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I O no
hydrogen 2.892 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD1 no
hydrogen 4.244 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD2 no
hydrogen 3.026 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 100K OD1 no
hydrogen 3.962 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100L OD1 no
hydrogen 3.182 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L HIS 91 O no
hydrogen 3.814 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 OD1 no
hydrogen 3.567 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 OD2 no
hydrogen 2.769 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 189 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 OD2 no
hydrogen 4.683 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG no
hydrogen 3.788 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 58 OD1 no
hydrogen 3.766 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 58 OD2 no
hydrogen 3.424 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG no
hydrogen 4.653 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH no
hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 OD1 no
hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG no
hydrogen 2.808 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 O no
hydrogen 3.729 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 747 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 46 OE1 no
hydrogen 5.126 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 185 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 30 OD1 no
hydrogen 4.053 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE1 no
hydrogen 3.271 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no
hydrogen 4.183 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 N2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no
hydrogen 4.370 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no
hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no
hydrogen 3.794 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no
hydrogen 4.323 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no
hydrogen 2.931 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no
hydrogen 2.870 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ILE 97 O no
hydrogen 3.751 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 101 OD2 no
hydrogen 4.400 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no
hydrogen 4.837 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H VAL 2 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 no
hydrogen 4.774 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 28 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 185 O no
hydrogen 2.901 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 30 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 183 O no
hydrogen 4.839 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 33 OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 O no
hydrogen 4.901 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 33 OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 170 OE1 no
hydrogen 3.825 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLN 39 NE2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 38 OE1 no
hydrogen 3.146 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H LEU 45 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 99 O no
hydrogen 5.079 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TRP 47 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LEU 96 O no
hydrogen 4.378 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 54 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 O no
hydrogen 4.552 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 O no
hydrogen 4.688 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no
hydrogen 3.307 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no
hydrogen 4.462 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 no
hydrogen 4.060 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 O no
hydrogen 2.914 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 O no
hydrogen 3.475 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 OD1 no
hydrogen 4.704 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 100K N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 O no
hydrogen 3.356 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100M OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 O no
hydrogen 2.952 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100N OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 55 OE1 no
hydrogen 3.280 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100O N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 36 OH no
hydrogen 3.309 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 135 O no
hydrogen 3.869 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O5 no
hydrogen 4.887 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 no
hydrogen 3.632 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 27 NE2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 O no
hydrogen 3.797 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 30 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 OE1 no
hydrogen 3.494 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 no
hydrogen 4.886 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O6 no
hydrogen 3.786 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 36 OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100O O no
hydrogen 4.364 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 38 NE2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLN 39 OE1 no
hydrogen 2.945 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O4 no
hydrogen 3.574 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O5 no
hydrogen 4.918 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no
hydrogen 4.514 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH no
hydrogen 3.152 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100L OD2 no
hydrogen 3.175 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 52 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O6 no
hydrogen 4.679 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 N
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 no
hydrogen 3.017 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 OD1 no
hydrogen 4.535 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O5 no
hydrogen 4.351 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 89 NE2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100M O no
hydrogen 3.284 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 O no
hydrogen 4.044 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 ND2
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 OE1 no
hydrogen 4.779 N/A
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 93 OH
Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 O no
hydrogen 3.603 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ASN 160 ND2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no
hydrogen 3.857 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ARG 166 NH1
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no
hydrogen 4.507 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ARG 166 NH2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no
hydrogen 4.105 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A LYS 169 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100B OD2 no
hydrogen 3.534 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no
hydrogen 4.914 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE2 no
hydrogen 4.749 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 132 OG1
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L HIS 27 ND1 no
hydrogen 4.383 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 158 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 O no
hydrogen 2.863 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 158 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 OD1 no
hydrogen 2.785 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 163 OG1
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 33 OH no
hydrogen 4.833 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NE
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no
hydrogen 4.268 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NE
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no
hydrogen 4.794 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NH2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no
hydrogen 3.790 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 168 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 no
hydrogen 4.296 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I O no
hydrogen 2.830 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 no
hydrogen 4.794 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no
hydrogen 4.838 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K OD1 no
hydrogen 2.984 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100L OD1 no
hydrogen 2.681 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 OD1 no
hydrogen 4.315 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 305 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 58 OD1 no
hydrogen 3.334 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 305 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 58 OD2 no
hydrogen 3.096 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG no
hydrogen 3.385 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLY 55 O no
hydrogen 4.656 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH no
hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 OD1 no
hydrogen 2.873 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no
hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG no
hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no
hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 O no
hydrogen 5.053 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C LYS 169 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H PHE 100D O no
hydrogen 3.085 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C LYS 169 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no
hydrogen 4.674 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C ASN 185 ND2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 28 OG no
hydrogen 4.042 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no
hydrogen 2.904 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 N2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no
hydrogen 4.624 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH no
hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O3
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no
hydrogen 3.659 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no
hydrogen 5.152 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no
hydrogen 3.734 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O6
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no
hydrogen 2.874 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TRP 47 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 96 O no
hydrogen 4.180 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 50 NH1
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no
hydrogen 4.991 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 50 NH2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no
hydrogen 4.641 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 304 O no
hydrogen 4.756 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 O no
hydrogen 3.497 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 62 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O6 no
hydrogen 4.891 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 98 NH1
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 no
hydrogen 4.263 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O5 no
hydrogen 4.369 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 no
hydrogen 4.788 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 O4 no
hydrogen 3.821 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 no
hydrogen 4.667 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 no
hydrogen 3.531 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ASP 167 O no
hydrogen 2.790 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ASP 167 O no
hydrogen 2.812 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 O no
hydrogen 3.763 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K ND2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no
hydrogen 4.567 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100M OH
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no
hydrogen 3.042 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L TYR 36 OH no
hydrogen 2.952 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLN 89 OE1 no
hydrogen 4.726 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 135 OG1 no
hydrogen 4.920 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 no
hydrogen 3.011 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O5 no
hydrogen 4.876 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B GLN 130 OE1 no
hydrogen 3.060 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 no
hydrogen 4.807 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 no
hydrogen 3.926 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 31 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no
hydrogen 4.157 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L TYR 36 OH
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O O no
hydrogen 4.223 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLN 38 NE2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLN 39 OE1 no
hydrogen 2.438 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 46 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 101 O no
hydrogen 4.804 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O4 no
hydrogen 3.878 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O7 no
hydrogen 4.344 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100N OH no
hydrogen 5.013 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 no
hydrogen 4.535 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no
hydrogen 4.745 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O4 no
hydrogen 2.941 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no
hydrogen 4.593 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 67 OG
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no
hydrogen 3.874 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 ND2
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B GLN 130 OE1 no
hydrogen 3.855 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 96 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 60 OD1 no
hydrogen 4.570 N/A
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L PHE 98 N
Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H LEU 45 O no
hydrogen 4.749 N/A
7t77 #4/A ASN 167 ND2
7t77 #4/H TYS 100G O1 no
hydrogen 3.008 N/A
7t77 #4/A ARG 169 NH2
7t77 #4/H ASN 100C O no
hydrogen 4.895 N/A
7t77 #4/C ARG 169 NH1
7t77 #4/H GLY 100D O no
hydrogen 2.960 N/A
7t77 #4/C ARG 186 NH1
7t77 #4/H TYR 100N OH no
hydrogen 4.377 N/A
7t77 #4/E LYS 168 NZ
7t77 #4/H TYS 100H O3 no
hydrogen 3.135 N/A
7t77 #4/E ARG 169 N
7t77 #4/H ASN 100F O no
hydrogen 3.121 N/A
7t77 #4/E LYS 171 N
7t77 #4/H ASP 100I O no
hydrogen 4.240 N/A
7t77 #4/E LYS 171 NZ
7t77 #4/H ASP 100I OD1 no
hydrogen 2.977 N/A
7t77 #4/E ARG 172 NH1
7t77 #4/H ASP 100L OD1 no
hydrogen 3.106 N/A
7t77 #4/E ARG 172 NH2
7t77 #4/H ASP 100L OD1 no
hydrogen 3.187 N/A
7t77 #4/E ARG 172 NH2
7t77 #4/H ASP 100L OD2 no
hydrogen 4.092 N/A
7t77 #4/E TYR 173 OH
7t77 #4/H TYR 100K OH no
hydrogen 3.176 N/A
7t77 #4/H ARG 31 NH1
7t77 #4/C ASP 185 OD2 no
hydrogen 5.057 N/A
7t77 #4/H GLN 39 NE2
7t77 #4/L GLN 38 OE1 no
hydrogen 2.971 N/A
7t77 #4/H SER 74 N
7t77 #4/j MAN 5 O6 no
hydrogen 3.135 N/A
7t77 #4/H SER 74 OG
7t77 #4/j MAN 5 O4 no
hydrogen 4.355 N/A
7t77 #4/H SER 74 OG
7t77 #4/j MAN 5 O6 no
hydrogen 3.762 N/A
7t77 #4/H ARG 100B NE
7t77 #4/h NAG 1 O6 no
hydrogen 2.959 N/A
7t77 #4/H ARG 100B NH2
7t77 #4/h NAG 1 O5 no
hydrogen 3.418 N/A
7t77 #4/H ARG 100B NH2
7t77 #4/h NAG 1 O6 no
hydrogen 2.953 N/A
7t77 #4/H ASN 100F N
7t77 #4/E ASN 167 O no
hydrogen 3.325 N/A
7t77 #4/H ASN 100F ND2
7t77 #4/X NAG 1 O7 no
hydrogen 5.183 N/A
7t77 #4/H TYS 100H N
7t77 #4/E ARG 169 O no
hydrogen 2.976 N/A
7t77 #4/H TYR 100K N
7t77 #4/E LYS 171 O no
hydrogen 4.380 N/A
7t77 #4/H TYR 100K OH
7t77 #4/E TYR 173 OH no
hydrogen 3.176 N/A
7t77 #4/H TYR 100K OH
7t77 #4/j NAG 1 O4 no
hydrogen 4.788 N/A
7t77 #4/H TYR 100K OH
7t77 #4/j NAG 2 O3 no
hydrogen 4.518 N/A
7t77 #4/H ASN 100P N
7t77 #4/h MAN 5 O3 no
hydrogen 4.984 N/A
7t77 #4/H ASN 100P ND2
7t77 #4/h MAN 5 O4 no
hydrogen 2.860 N/A
7t77 #4/H HIS 100R ND1
7t77 #4/h MAN 6 O3 no
hydrogen 3.359 N/A
7t77 #4/H HIS 100R ND1
7t77 #4/h MAN 6 O4 no
hydrogen 3.351 N/A
7t77 #4/H HIS 100R NE2
7t77 #4/h MAN 5 O4 no
hydrogen 3.440 N/A
7t77 #4/H MET 100T N
7t77 #4/L TYR 36 OH no
hydrogen 2.800 N/A
7t77 #4/L GLN 1 N
7t77 #4/H ASP 61 OD2 no
hydrogen 2.863 N/A
7t77 #4/L SER 32 OG
7t77 #4/H HIS 100R ND1 no
hydrogen 4.017 N/A
7t77 #4/L SER 32 OG
7t77 #4/h MAN 6 O3 no
hydrogen 2.926 N/A
7t77 #4/L SER 34 OG
7t77 #4/H HIS 100R O no
hydrogen 4.978 N/A
7t77 #4/L TYR 36 OH
7t77 #4/H MET 100T O no
hydrogen 3.815 N/A
7t77 #4/L GLN 38 NE2
7t77 #4/H GLN 39 OE1 no
hydrogen 2.918 N/A
7t77 #4/L SER 56 N
7t77 #4/X BMA 3 O3 no
hydrogen 5.008 N/A
7t77 #4/L SER 56 OG
7t77 #4/X BMA 3 O2 no
hydrogen 4.789 N/A
7t77 #4/L SER 56 OG
7t77 #4/X BMA 3 O3 no
hydrogen 3.927 N/A
7t77 #4/L TYR 87 OH
7t77 #4/H GLN 43 O no
hydrogen 4.064 N/A
7t77 #4/L ARG 95 NH1
7t77 #4/H GLU 56 OE1 no
hydrogen 3.124 N/A
7t77 #4/L ARG 95A NE
7t77 #4/H HIS 59 O no
hydrogen 3.472 N/A
7t77 #4/L ARG 96 NE
7t77 #4/H GLU 95 OE2 no
hydrogen 3.747 N/A
7t77 #4/L ARG 96 NH2
7t77 #4/H GLU 95 OE2 no
hydrogen 2.855 N/A
7t77 #4/X BMA 3 O2
7t77 #4/L SER 56 OG no
hydrogen 4.789 N/A
7t77 #4/X BMA 3 O3
7t77 #4/L SER 56 OG no
hydrogen 3.927 N/A
7t77 #4/X BMA 3 O4
7t77 #4/L SER 56 OG no
hydrogen 4.978 N/A
7t77 #4/h NAG 1 O6
7t77 #4/H ASP 100 OD2 no
hydrogen 4.044 N/A
7t77 #4/h NAG 1 O6
7t77 #4/H TYS 100G O2 no
hydrogen 4.935 N/A
7t77 #4/h NAG 2 N2
7t77 #4/H ASP 100 OD2 no
hydrogen 4.837 N/A
7t77 #4/h MAN 4 O2
7t77 #4/L SER 32 OG no
hydrogen 3.818 N/A
7t77 #4/h MAN 5 O4
7t77 #4/H HIS 100R NE2 no
hydrogen 3.440 N/A
7t77 #4/h MAN 6 O2
7t77 #4/L GLU 31 O no
hydrogen 4.821 N/A
7t77 #4/h MAN 6 O3
7t77 #4/H TYR 100Q O no
hydrogen 4.294 N/A
7t77 #4/h MAN 6 O3
7t77 #4/H HIS 100R ND1 no
hydrogen 3.359 N/A
7t77 #4/h MAN 6 O3
7t77 #4/L SER 32 OG no
hydrogen 2.926 N/A
7t77 #4/h MAN 6 O3
7t77 #4/L ASP 50 OD2 no
hydrogen 3.718 N/A
7t77 #4/h MAN 6 O4
7t77 #4/H ASN 100P O no
hydrogen 3.545 N/A
7t77 #4/h MAN 6 O4
7t77 #4/H TYR 100Q O no
hydrogen 2.714 N/A
7t77 #4/h MAN 6 O4
7t77 #4/H HIS 100R ND1 no
hydrogen 3.351 N/A
7t77 #4/h MAN 6 O6
7t77 #4/H TYR 100Q O no
hydrogen 4.679 N/A
7t77 #4/h MAN 6 O6
7t77 #4/L ASP 50 OD1 no
hydrogen 3.389 N/A
7t77 #4/j NAG 2 N2
7t77 #4/H TYR 100K OH no
hydrogen 2.783 N/A
7t77 #4/j NAG 2 O3
7t77 #4/H TYR 100K OH no
hydrogen 4.518 N/A
7t77 #4/j BMA 3 O2
7t77 #4/H GLY 54 O no
hydrogen 4.057 N/A
7t77 #4/j MAN 5 O2
7t77 #4/H ARG 71 O no
hydrogen 5.083 N/A
7t77 #4/j MAN 5 O4
7t77 #4/H ASP 72 OD1 no
hydrogen 3.091 N/A
7t77 #4/j MAN 5 O4
7t77 #4/H SER 74 OG no
hydrogen 4.355 N/A
7t77 #4/j MAN 5 O6
7t77 #4/H ASP 72 OD1 no
hydrogen 2.858 N/A
7t77 #4/j MAN 5 O6
7t77 #4/H SER 74 OG no
hydrogen 3.762 N/A
305 hydrogen bonds found
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected
> style sel & #!1 sphere
Changed 1137 atom styles
> select clear
> transparency 50 :NAG, NAM, BMA, MAN sphere
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 :NAG, NAM, BMA, MAN surfaces
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 :NAG, NAM, BMA, MAN
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 :NAG, NAM, BMA, MAN
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 #1 :NAG, NAM, BMA, MAN
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency 50 #1 :NAG, NAM, BMA, MAN atoms
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency :NAG, NAM, BMA, MAN atoms
Missing or invalid "percent" argument: Expected a number
> transparency :NAG, NAM, BMA, MAN atoms 50
Missing or invalid "percent" argument: Expected a number
> transparency :NAG, NAM, BMA, MAN 50
> transparency :NAG, NAM, BMA, MAN 50 atoms
> transparency :NAG, NAM, BMA, MAN 10 atoms
> transparency :NAG, NAM, BMA, MAN 0 atoms
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> show #!4 models
> hide #!3 models
> show #!3 models
> hide #!4 models
> show #!2 models
> hide #!3 models
> show #!1 models
> hide #!2 models
> close #6
> select :NAG, NAM, BMA, MAN
4404 atoms, 4526 bonds, 327 residues, 4 models selected
> select #1 :NAG, NAM, BMA, MAN
1137 atoms, 1169 bonds, 84 residues, 1 model selected
> select clear
> hide #!1 atoms
> show #!1 atoms
> hide #!1 atoms
> select #1 :NAG, NAM, BMA, MAN
1137 atoms, 1169 bonds, 84 residues, 1 model selected
> style sel sphere
Changed 1137 atom styles
> show sel atoms
> select clear
> save "/Users/sphulera/OneDrive - The Scripps Research
>
Institute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession#1.cxs"
> close #5
> distance #1 /B :795 @O6 #1 /H :100A @OD2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN
795
O6 and /H ASP 100A OD2: 2.836Å
> show #1 /B :795 #1 /H :100A
> ui tool show Distances
> distance style color #ff85ff
> distance style color #d783ff
> distance style color black
> close #5
> distance #1 /B :795 @O6 #1 /H :100A @OD2
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN
795
O6 and /H ASP 100A OD2: 2.836Å
> ~hbonds
> distance style symbol false
> distance style symbol true
> hide #5.1 models
> distance style dashes 8
> distance style dashes 7
> distance style dashes 6
> distance style dashes 5
> distance style dashes 4
> distance style dashes 3
> distance style dashes 2
> distance style dashes 3
> distance style dashes 4
> distance style dashes 5
> distance style dashes 6
> distance style dashes 7
> distance style dashes 8
> distance style dashes 9
> distance style dashes 10
> distance style dashes 11
> distance style dashes 12
> distance style dashes 13
> distance style dashes 14
> distance style radius 0.05
> distance #1 /B :793 @O2 #1 /L :53 @OG
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN
793
O2 and /L SER 53 OG: 3.462Å
> show #1 /B :793 #1 /L :53
> show #1 /B :794 #1 /L :52
> distance #1 /B :794 @O3 #1 /L :52 @O
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN
794
O3 and /L SER 52 O: 2.876Å
> distance #1 /A :796 @O6 #1 /H :100B @O3
Expected exactly two atoms and/or measurable objects (e.g. axes, planes),
or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> show #1 /A :769 #1 /H :100B
> distance #1 /A :769 @O6 #1 /H :100B @O3
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG
769
O6 and /H TYS 100B O3: 3.280Å
> distance #1 /B :792 @O4 #1 /L :31 @OH
Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN
792
O4 and /L TYR 31 OH: 3.268Å
> show #1 /B :792 #1 /L :31
> distance style radius 0.01
> distance style radius 0.02
> distance style radius 0.04
> distance style radius 0.045
> distance style radius 0.05
> distance style dashes 20
> select #1 /A,B,C,H,L
16689 atoms, 17142 bonds, 17 pseudobonds, 2048 residues, 3 models selected
> ui tool show H-Bonds
> hbonds sel restrict both interModel false distSlop 2.0 intraMol false
> intraRes false reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
71 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O2 no
hydrogen 3.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no
hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no
hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 158 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no
hydrogen 3.190 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 no
hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE2 no
hydrogen 5.106 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 O no
hydrogen 4.793 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 32 OD1 no
hydrogen 2.314 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE1 no
hydrogen 4.195 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E O no
hydrogen 2.894 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG no
hydrogen 4.810 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 NE
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100F OH no
hydrogen 3.847 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD1 no
hydrogen 2.460 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no
hydrogen 3.284 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no
hydrogen 2.527 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD2 no
hydrogen 3.110 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no
hydrogen 4.536 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG no
hydrogen 4.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 189 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 O no
hydrogen 3.911 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H THR 57 O no
hydrogen 4.539 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 58 OD1 no
hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no
hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no
hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no
hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no
hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no
hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no
hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no
hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no
hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no
hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no
hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no
hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ARG 169 NH1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100D OH no
hydrogen 3.779 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no
hydrogen 4.851 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no
hydrogen 4.640 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no
hydrogen 5.017 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no
hydrogen 2.524 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 33 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 170 OE1 no
hydrogen 3.642 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no
hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no
hydrogen 3.729 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no
hydrogen 4.588 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no
hydrogen 4.208 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 50 NH2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 O no
hydrogen 2.427 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no
hydrogen 3.676 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no
hydrogen 3.726 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no
hydrogen 3.671 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASN 56 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 306 O no
hydrogen 3.199 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LYS 64 NZ
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ILE 323 O no
hydrogen 4.809 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no
hydrogen 3.005 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no
hydrogen 3.854 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no
hydrogen 2.874 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 100H N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no
hydrogen 4.086 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no
hydrogen 4.866 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no
hydrogen 2.822 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 OE1 no
hydrogen 5.022 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no
hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no
hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no
hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no
hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no
hydrogen 3.808 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no
hydrogen 3.201 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no
hydrogen 4.990 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no
hydrogen 4.790 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no
hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no
hydrogen 2.623 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no
hydrogen 3.107 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no
hydrogen 3.957 N/A
71 hydrogen bonds found
> select clear
> ~hbonds
> select #1 /A,B,C: NAG, NAM, BMA, MAN #1 /H,L
2930 atoms, 3010 bonds, 5 pseudobonds, 314 residues, 2 models selected
> ui tool show H-Bonds
> hbonds sel restrict both interModel false distSlop 2.0 intraMol false
> intraRes false reveal true log true
Finding intramodel H-bonds
Constraints relaxed by 2 angstroms and 20 degrees
Models used:
1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb
35 H-bonds
H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no
hydrogen 3.540 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no
hydrogen 3.280 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no
hydrogen 3.966 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no
hydrogen 3.346 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no
hydrogen 4.863 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no
hydrogen 5.090 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no
hydrogen 4.019 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no
hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no
hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no
hydrogen 4.780 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no
hydrogen 4.986 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 5.036 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no
hydrogen 4.949 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 4.486 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 2.721 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no
hydrogen 4.724 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no
hydrogen 2.836 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no
hydrogen 2.564 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no
hydrogen 3.729 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no
hydrogen 4.588 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no
hydrogen 4.208 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no
hydrogen 4.866 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no
hydrogen 2.822 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no
hydrogen 3.268 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no
hydrogen 4.218 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no
hydrogen 3.704 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no
hydrogen 2.290 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no
hydrogen 3.808 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no
hydrogen 3.201 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no
hydrogen 4.990 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no
hydrogen 4.790 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no
hydrogen 3.462 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no
hydrogen 2.623 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no
hydrogen 3.107 N/A
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N
Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no
hydrogen 3.957 N/A
35 hydrogen bonds found
> select clear
> select #1 /A,B,C,H,L ~:NAG,NAM,BMA,MAN
Expected a keyword
> select #1 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN
15552 atoms, 15921 bonds, 25 pseudobonds, 1964 residues, 3 models selected
> hide sel atoms
> ~hbonds
> show #1 /B :792 #1 /L :31
> show #1 /A :769 #1 /H :100B
> show #1 /B :794 #1 /L :52
> show #1 /B :792,794,795,793,769 #1 /L :52
> select clear
> show #1 /B :792,794,795,793,769 #1 /L :31,100B,53,52 #1 /H :100A
> select clear
> list view
Unknown command: list view
> view list
Named views: TYR100B
> view TYR100B
> select clear
> ui tool show "Side View"
> hide #!1 models
> show #!2 models
> select #2 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN
14860 atoms, 15167 bonds, 20 pseudobonds, 1886 residues, 2 models selected
> hide sel atoms
> select #2 :NAG,NAM,BMA,MAN
971 atoms, 994 bonds, 73 residues, 1 model selected
> style sel sphere
Changed 971 atom styles
> show #!1 models
> hide #!2 models
> select #A :NAG,NAM,BMA,MAN
Expected an objects specifier or a keyword
> select #1 /A :NAG,NAM,BMA,MAN
372 atoms, 381 bonds, 27 residues, 1 model selected
> select #1 /A,B,C :180
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> hide sel atoms
> select #1 /A,B,C :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select #1 /A,B,C :156
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> select #1 /A,B,C :160
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select #1 /A,B,C :197
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select #1 /A,B,C :301
24 atoms, 21 bonds, 3 residues, 1 model selected
> show sel atoms
> select clear
> view list
Named views: TYR100B
> view TYR100B
> lighting soft
> lighting simple
> lighting soft
> lighting full
> lighting soft
> save "/Users/sphulera/OneDrive - The Scripps Research
>
Institute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession#1.cxs"
> show #!2 models
> hide #!1 models
> select #2 /B :731 #2 /L 31
Expected a keyword
> select #2 /B :731 #2 /L :31
20 atoms, 19 bonds, 2 residues, 1 model selected
> show sel atoms
> distance #2 /B :731 @O6 #2 /L :31 @OG
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B
NAG
731 O6 and /L SER 31 OG: 2.808Å
> show #!1 models
> hide #!1 models
> distance #2 /B :703 @O4 #2 /L :50 @nz
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B
NAG
703 O4 and /L LYS 50 NZ: 3.574Å
> show #2 /B :703 #2 /L :50
> show #2 /C :703 #2 /H :100A
> distance #2 /C :703 @O6 #2 /H :100A @OE1
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C
NAG
703 O6 and /H GLU 100A OE1: 3.271Å
> distance #2 /C :733 @O4 #2 /H :97 @O
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C
MAN
733 O4 and /H ILE 97 O: 3.751Å
> show #2 /H :97
> distance #2 /B :730 @O6 #2 /L :1 @N
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B
NAG
730 O6 and /L ASP 1 N: 3.632Å
> show #2 /L :1 @N
> show #2 /L :1
> distance #2 /c :733 @O6 #2 /L :56 @OD1
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C
MAN
733 O6 and /L ASP 56 OD1: 8.841Å
> show #2 /c :733 #2 /L :56
> show #2 /c :744 #2 /H :1
> distance #2 /c :744 &O6 #2 /H :1 @N
Expected a keyword
> distance #2 /C :744 &O6 #2 /H :1 @N
Expected a keyword
> distance #2 /C :744 @O6 #2 /H :1 @N
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C
MAN
744 O6 and /H GLN 1 N: 2.843Å
> select clear
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!3 models
> distance #3 /C :729 @O3 #3 /L :1 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C
NAG
729 O3 and /L ASP 1 N: 95.755Å
> ~distance #2/C:733@O6 #2/L:56@OD1
> distance #3 /b :729 @O3 #3 /L :1 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B
NAG
729 O3 and /L ASP 1 N: 3.011Å
> show #3 /b :729 @O3 #3 /L :1 @N
> hide #!1 models
> ~distance #3/C:729@O3 #3/L:1@N
> select #3 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN
14917 atoms, 15255 bonds, 19 pseudobonds, 1896 residues, 2 models selected
> hide sel atoms
> distance #3 /B :729 @O3 #3 /L :1 @OD1
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B
NAG
729 O3 and /L ASP 1 OD1: 2.873Å
> show #3 /B :729 #3 /L :1
> color (#!3 & sel) byhetero
> select clear
> show #3 /B :734 #3 /L :66
> distance #3 /B :734 @O4 #3 /L :66 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B
MAN
734 O4 and /L GLY 66 N: 2.941Å
> distance #3 /B :733 @O4 #3 /L :31 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B
MAN
733 O4 and /L SER 31 N: 7.644Å
> ~distance #3/B:733@O4 #3/L:31@N
> distance #3 /B :733 @O6 #3 /L :31 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B
MAN
733 O6 and /L SER 31 N: 3.809Å
> show #3 /B :733 @O6 #3 /L :31 @N
> show #3 /B :733 #3 /L :31
> show #3 /B :731 #3 /H :100G
> distance #3 /B :731 @O4 #3 /H :100G@OH
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B
NAG
731 O4 and /H TYR 100G OH: 18.489Å
> ~distance #3/B:731@O4 #3/H:100G@OH
> distance #3 /C :731 @O4 #3 /H :100G@OH
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C
NAG
731 O4 and /H TYR 100G OH: 3.821Å
> show #3 /c :160
> show #3 /A :160
> show #3 /B :160
> show #3 /C :733 /H :97
> distance #3 /C :733 @O6 /H :97 @O
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C
MAN
733 O6 and /H ILE 97 O: 2.874Å
> distance #3 /B :703 @O6 /H :100H @O
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B
NAG
703 O6 and /H TYR 100H O: 8.058Å
> show #3 /B :703 @O6 /H :100H @O
> ~distance #3/B:703@O6 #3/H:100H@O
> show #3 /B :703 @O6 #3 /H :100H @O
> distance #3 /B :703 @O6 #3 /H :100H @O
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B
NAG
703 O6 and /H TYR 100H O: 8.058Å
> ~distance #3/B:703@O6 #3/H:100H@O
> distance #3 /B :703 @O6 #3 /H :100H @OH
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B
NAG
703 O6 and /H TYR 100H OH: 3.531Å
> show #3 /B :703 @O6 #3 /H :100H @OH
> show #3 /B :703 #3 /H :100H
> show #3 /C :733 #3 /L :56
> distance #3 /C :733 @O4 #3 /L :56 @OD2
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C
MAN
733 O4 and /L ASP 56 OD2: 3.734Å
> show #3 /B :133
> hide #!3 models
> show #!2 models
> show #2 :160
> show #2 :156
> distance save /Users/sphulera/Desktop/test
> show #2 :133
> show #2 :197
> show #2 :301
> distance #2 /B :733 @O6 #2 /L :31 @N
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B
MAN
733 O6 and /L SER 31 N: 3.309Å
> ~distance #3/B:733@O6 #3/L:31@N
> distance #2 /B :733 @O3 #2 /L :31 @OD1
Expected exactly two atoms and/or measurable objects (e.g. axes, planes),
or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> distance #2 /C :733 @O3 #2 /L :31 @OD1
Expected exactly two atoms and/or measurable objects (e.g. axes, planes),
or
one or more measurable objects and one or more atoms, got 1 atoms and 0
measurable objects
> distance #2 /C :733 @O3 #2 /L :56 @OD1
Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C
MAN
733 O3 and /L ASP 56 OD1: 2.931Å
> show #!1 models
> hide #!2 models
> view list
Named views: TYR100B
> view TYR100B
> ui tool show "Side View"
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> distance #2 /B :733 @O6 #2 /L :31 @N
Distance already exists; modify distance properties with 'distance style'
> show #!2 models
> hide #!3 models
> show #!3 models
> distance #3 /B :733 @O6 #3 /L :31 @N
Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B
MAN
733 O6 and /L SER 31 N: 3.809Å
> hide #!3 models
> show #!3 models
> hide #!2 models
> show #!2 models
> hide #!3 models
> show #!3 models
> hide #!3 models
> hide #!2 models
> show #!1 models
> view name G1
> view name G2
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> view name G3
> view g1
Expected an objects specifier or a view name or a keyword
> view G1
> hide #!3 models
> show #!2 models
> view G1
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!2 models
> show #!2 models
> hide #!2 models
> show #!3 models
> hide #!1 models
> show #!1 models
> view G2
> hide #!3 models
> view G1
> view G2
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> show #!1 models
> hide #!3 models
> view G2
> view G3
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> show #!3 models
> hide #!2 models
> hide #!3 models
> show #!1 models
> view G1
> select clear
> save /Users/sphulera/Desktop/image53.png supersample 3
> view G2
> save /Users/sphulera/Desktop/image54.png supersample 3
> view G3
> save /Users/sphulera/Desktop/image55.png supersample 3
> show #!2 models
> hide #!1 models
> view G2
> save /Users/sphulera/Desktop/image56.png supersample 3
> view G3
> save /Users/sphulera/Desktop/image57.png supersample 3
> show #!3 models
> hide #!2 models
> view G2
> save /Users/sphulera/Desktop/image58.png supersample 3
> view G3
> save /Users/sphulera/Desktop/image59.png supersample 3
> view G2
> select clear
> select /L :24-34
349 atoms, 350 bonds, 47 residues, 4 models selected
> view G2
===== Log before crash end =====
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 88.1
OpenGL renderer: Apple M3
OpenGL vendor: Apple
Python: 3.11.4
Locale: UTF-8
Qt version: PyQt6 6.7.1, Qt 6.7.1
Qt runtime version: 6.7.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: Mac15,12
Model Number: Z1B600163LL/A
Chip: Apple M3
Total Number of Cores: 8 (4 performance and 4 efficiency)
Memory: 16 GB
System Firmware Version: 10151.121.1
OS Loader Version: 10151.121.1
Software:
System Software Overview:
System Version: macOS 14.5 (23F79)
Kernel Version: Darwin 23.5.0
Time since boot: 4 days, 23 hours, 31 minutes
Graphics/Displays:
Apple M3:
Chipset Model: Apple M3
Type: GPU
Bus: Built-In
Total Number of Cores: 10
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina Display
Resolution: 2560 x 1664 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
LG HDR 4K:
Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition)
UI Looks like: 1920 x 1080 @ 60.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
alabaster: 1.0.0
anyio: 4.7.0
appdirs: 1.4.4
appnope: 0.1.4
asttokens: 3.0.0
auditwheel: 6.1.0
babel: 2.16.0
beautifulsoup4: 4.12.3
blockdiag: 3.0.0
blosc2: 3.0.0
build: 1.2.1
certifi: 2023.11.17
cftime: 1.6.4.post1
charset-normalizer: 3.4.0
ChimeraX-AddCharge: 1.5.18
ChimeraX-AddH: 2.2.6
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.5
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.16.1
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.1.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.58.8
ChimeraX-AtomicLibrary: 14.1.11
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 3.0.0
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.13.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.4.0
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.4
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.3
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.6
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.9
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.4
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2.6
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.3
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-KVFinder: 1.2.1
ChimeraX-Label: 1.1.14
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.6
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.7.2
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.14.2
ChimeraX-MMTF: 2.2
ChimeraX-ModelArchive: 1.0
ChimeraX-Modeller: 1.5.18
ChimeraX-ModelPanel: 1.5
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-MutationScores: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.14
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.6
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.2
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.6.2
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.5.6
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.14
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.0
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-SimilarStructures: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.18.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.41
ChimeraX-Umap: 1.0
ChimeraX-uniprot: 2.3.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.4.4
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.4
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.2
contourpy: 1.3.1
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.0.10
debugpy: 1.8.9
decorator: 5.1.1
docutils: 0.21.2
executing: 2.1.0
filelock: 3.15.4
fonttools: 4.55.3
funcparserlib: 2.0.0a0
glfw: 2.8.0
grako: 3.16.5
h11: 0.14.0
h5py: 3.12.1
html2text: 2024.2.26
httpcore: 1.0.7
httpx: 0.28.1
idna: 3.10
ihm: 1.3
imagecodecs: 2024.6.1
imagesize: 1.4.1
ipykernel: 6.29.5
ipython: 8.26.0
ipywidgets: 8.1.5
jedi: 0.19.1
Jinja2: 3.1.4
jupyter_client: 8.6.2
jupyter_core: 5.7.2
jupyterlab_widgets: 3.0.13
kiwisolver: 1.4.7
line_profiler: 4.1.3
lxml: 5.2.2
lz4: 4.3.3
MarkupSafe: 3.0.2
matplotlib: 3.9.2
matplotlib-inline: 0.1.7
msgpack: 1.0.8
ndindex: 1.9.2
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.10.2
numpy: 1.26.4
openvr: 1.26.701
packaging: 23.2
ParmEd: 4.2.2
parso: 0.8.4
pep517: 0.13.1
pexpect: 4.9.0
pillow: 10.4.0
pip: 24.2
pkginfo: 1.11.1
platformdirs: 4.3.6
prompt_toolkit: 3.0.48
psutil: 6.0.0
ptyprocess: 0.7.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pycollada: 0.8
pydicom: 2.4.4
pyelftools: 0.31
Pygments: 2.18.0
pynmrstar: 3.3.4
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.3401
pyparsing: 3.2.0
pyproject_hooks: 1.2.0
PyQt6-commercial: 6.7.1
PyQt6-Qt6: 6.7.3
PyQt6-WebEngine-commercial: 6.7.0
PyQt6-WebEngine-Qt6: 6.7.3
PyQt6-WebEngineSubwheel-Qt6: 6.7.3
PyQt6_sip: 13.8.0
python-dateutil: 2.9.0.post0
pytz: 2024.2
pyzmq: 26.2.0
qtconsole: 5.5.2
QtPy: 2.4.2
qtshim: 1.0
RandomWords: 0.4.0
requests: 2.32.3
scipy: 1.14.0
setuptools: 72.1.0
sfftk-rw: 0.8.1
six: 1.16.0
sniffio: 1.3.1
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.6
Sphinx: 8.0.2
sphinx-autodoc-typehints: 2.2.3
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
stack-data: 0.6.3
superqt: 0.6.3
tables: 3.10.1
tcia_utils: 1.5.1
tifffile: 2024.7.24
tinyarray: 1.2.4
tornado: 6.4.2
traitlets: 5.14.3
typing_extensions: 4.12.2
tzdata: 2024.2
urllib3: 2.2.3
wcwidth: 0.2.13
webcolors: 24.6.0
wheel: 0.43.0
wheel-filename: 1.4.1
widgetsnbextension: 4.0.13
}}}
--
Comment:
Reported by Swastik
--
Ticket URL: <https://www.rbvi.ucsf.edu/trac/ChimeraX/ticket/16699#comment:1>
ChimeraX <https://www.rbvi.ucsf.edu/chimerax/>
ChimeraX Issue Tracker
comment:3 by , 9 months ago
| Resolution: | → duplicate |
|---|---|
| Status: | assigned → closed |
In the ChimeraX Report a Bug panel it showed the following text in red that explains this is a crash in the Qt windows toolkit when using multiple displays on Mac and we don't currently have a solution for it but are hoping a newer Qt will fix it. We will be updating the Qt version in the ChimeraX daily build to 6.8.2 from the current 6.7.3 when 6.8.2 is released. Here is the Qt release schedule
"This is a known crash that we are unable to fix. Here is information that may help you avoid this crash. The Qt window toolkit crashed due to a display configuration change, typically when waking from sleep or when an external display is disconnected or connected. This has only been seen on Mac computers. We hope a newer version of Qt will fix it. We update ChimeraX daily builds whenever a new Qt is released. You can check here https://www.cgl.ucsf.edu/chimerax/docs/troubleshoot.html#macdisplay to see if it has been fixed in a newer ChimeraX."
Note:
See TracTickets
for help on using tickets.
Reported by Swastik