Opened 9 months ago
Closed 9 months ago
#16649 closed defect (fixed)
Scalebar: "could not convert string to float" for various values
Reported by: | Owned by: | Tom Goddard | |
---|---|---|---|
Priority: | normal | Milestone: | |
Component: | Volume Data | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Linux-6.5.0-14-generic-x86_64-with-glibc2.35 ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC) Description (Describe the actions that caused this problem to occur here) Log: Startup Messages --- warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR bundle with that from NMRSTAR bundle UCSF ChimeraX version: 1.6.1 (2023-05-09) © 2016-2023 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open "/media/shubha/10_TB/SE_Just donor classes/masked/threed_15_02.hdf" Opened threed_15_02.hdf as #1, grid size 48,48,48, pixel 12.8, shown at level 1.79, step 1, values float32 > open "/media/shubha/10_TB/SE_Just donor classes/masked/threed_20_00.hdf" Opened threed_20_00.hdf as #2, grid size 48,48,48, pixel 12.8, shown at level 1.96, step 1, values float32 > open "/media/shubha/10_TB/SE_Just donor classes/masked/threed_20_02.hdf" Opened threed_20_02.hdf as #3, grid size 48,48,48, pixel 12.8, shown at level 2.89, step 1, values float32 > open "/media/shubha/10_TB/SE_Just donor classes/masked/threed_20_03.hdf" Opened threed_20_03.hdf as #4, grid size 48,48,48, pixel 12.8, shown at level 2.71, step 1, values float32 > open "/media/shubha/10_TB/SE_Just donor classes/masked/threed_20_06.hdf" Opened threed_20_06.hdf as #5, grid size 48,48,48, pixel 12.8, shown at level 2.74, step 1, values float32 > tile 5 models tiled > ui tool show Toolbar > ui mousemode right "translate selected models" [Repeated 1 time(s)] > ui mousemode right "move picked models" > view matrix models > #1,0.89243,-0.45118,0.0012762,74.976,-0.047468,-0.096703,-0.99418,756.89,0.44868,0.88718,-0.10772,10.741 > view matrix models > #2,0.89243,-0.45118,0.0012762,449.44,-0.047468,-0.096703,-0.99418,747.43,0.44868,0.88718,-0.10772,13.556 > view matrix models > #3,0.89243,-0.45118,0.0012762,903.68,-0.047468,-0.096703,-0.99418,739.36,0.44868,0.88718,-0.10772,13.871 > view matrix models > #4,0.89243,-0.45118,0.0012762,100.37,-0.047468,-0.096703,-0.99418,159.18,0.44868,0.88718,-0.10772,8.5376 > view matrix models > #5,0.89243,-0.45118,0.0012762,664.56,-0.047468,-0.096703,-0.99418,162.77,0.44868,0.88718,-0.10772,12.706 > view matrix models > #1,0.89243,-0.45118,0.0012762,20.481,-0.047468,-0.096703,-0.99418,730.98,0.44868,0.88718,-0.10772,10.741 > view matrix models > #1,0.89243,-0.45118,0.0012762,8.8678,-0.047468,-0.096703,-0.99418,750.63,0.44868,0.88718,-0.10772,10.741 > volume #1 level 1.519 > view matrix models > #1,0.89243,-0.45118,0.0012762,-62.601,-0.047468,-0.096703,-0.99418,750.63,0.44868,0.88718,-0.10772,10.741 > volume #2 level 1.495 > view matrix models > #3,0.89243,-0.45118,0.0012762,993.91,-0.047468,-0.096703,-0.99418,708.98,0.44868,0.88718,-0.10772,13.871 > volume #3 level 1.593 > view matrix models > #4,0.89243,-0.45118,0.0012762,-33.631,-0.047468,-0.096703,-0.99418,140.42,0.44868,0.88718,-0.10772,8.5376 > view matrix models > #3,0.89243,-0.45118,0.0012762,1009.1,-0.047468,-0.096703,-0.99418,737.57,0.44868,0.88718,-0.10772,13.871 > view matrix models > #4,0.89243,-0.45118,0.0012762,-59.538,-0.047468,-0.096703,-0.99418,140.42,0.44868,0.88718,-0.10772,8.5376 > volume #4 level 1.642 > view matrix models > #5,0.89243,-0.45118,0.0012762,674.27,-0.047468,-0.096703,-0.99418,139.02,0.44868,0.88718,-0.10772,12.706 > volume #5 level 1.349 > view matrix models > #5,0.89243,-0.45118,0.0012762,853,-0.047468,-0.096703,-0.99418,141.63,0.44868,0.88718,-0.10772,12.706 > view matrix models > #4,0.89243,-0.45118,0.0012762,103.54,-0.047468,-0.096703,-0.99418,124.76,0.44868,0.88718,-0.10772,8.5376 > ui mousemode right rotate > ui mousemode right "rotate selected models" > ui mousemode right "translate selected models" > ui mousemode right "move picked models" > view matrix models > #4,0.96943,-0.22953,0.08671,-26.973,0.10736,0.079043,-0.99107,-4.3571,0.22063,0.97009,0.10127,-26.259 > view matrix models > #5,0.96943,-0.22953,0.08671,744.76,0.10736,0.079043,-0.99107,58.89,0.22063,0.97009,0.10127,-22.822 > view matrix models > #1,0.96943,-0.22953,0.08671,-211.68,0.10736,0.079043,-0.99107,623.46,0.22063,0.97009,0.10127,-27.934 > volume style surface > lighting soft > view matrix models > #1,0.96943,-0.22953,0.08671,-227.02,0.10736,0.079043,-0.99107,618.31,0.22063,0.97009,0.10127,-27.934 > select add #1 2 models selected > select add #2 4 models selected > select add #3 6 models selected > select add #4 8 models selected > select add #5 10 models selected > volume #1 orthoplanes xyz positionPlanes 24,24,24 style image region all > mousemode rightMode "move planes" > volume #2 orthoplanes xyz positionPlanes 24,24,24 style image region all > mousemode rightMode "move planes" > volume #3 orthoplanes xyz positionPlanes 24,24,24 style image region all > mousemode rightMode "move planes" > volume #4 orthoplanes xyz positionPlanes 24,24,24 style image region all > mousemode rightMode "move planes" > volume #5 orthoplanes xyz positionPlanes 24,24,24 style image region all > mousemode rightMode "move planes" > volume sel region all imageMode "full region" > volume unzone sel > mousemode rightMode "crop volume" > volume sel style surface > volume sel showOutlineBox false > select add #1 11 models selected > select add #2 12 models selected > select add #3 13 models selected > select add #4 14 models selected > select add #5 15 models selected > select subtract #1 12 models selected > select subtract #2 9 models selected > select subtract #3 6 models selected > select subtract #4 3 models selected > select subtract #5 Nothing selected > ui tool show "Scale Bar" > scalebar > scalebar 20 > scalebar 200 > scalebar 250 > set bgColor white > set bgColor black > lighting soft > ui tool show "Selection Inspector" > volume #3 region 0,0,0,47,47,47 [Repeated 1 time(s)] > ui mousemode right "move picked models" > view matrix models > #3,0.96952,-0.22947,0.085934,883.15,0.1066,0.079223,-0.99114,688.76,0.22063,0.97009,0.10127,-20.535 > volume #5 change image level -1.158,0 level 2.736,0.8 level 10.04,1 > volume #5 level 1.463 > scalebar 100 > scalebar xpos 0.25 Traceback (most recent call last): File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 65, in _update_scalebar self._show_scalebar() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 70, in _show_scalebar options = self._changed_options() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 92, in _changed_options xpos, ypos = self._xpos.value, self._ypos.value File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) ValueError: could not convert string to float: '0..2' ValueError: could not convert string to float: '0..2' File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) See log for complete Python traceback. > scalebar xpos 0.1 > scalebar ypos 0.2 Traceback (most recent call last): File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 65, in _update_scalebar self._show_scalebar() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 70, in _show_scalebar options = self._changed_options() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 92, in _changed_options xpos, ypos = self._xpos.value, self._ypos.value File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) ValueError: could not convert string to float: '0.0.15' ValueError: could not convert string to float: '0.0.15' File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) See log for complete Python traceback. Traceback (most recent call last): File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 65, in _update_scalebar self._show_scalebar() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 70, in _show_scalebar options = self._changed_options() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 92, in _changed_options xpos, ypos = self._xpos.value, self._ypos.value File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) ValueError: could not convert string to float: '0.0.15' ValueError: could not convert string to float: '0.0.15' File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) See log for complete Python traceback. Traceback (most recent call last): File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 65, in _update_scalebar self._show_scalebar() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 70, in _show_scalebar options = self._changed_options() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 92, in _changed_options xpos, ypos = self._xpos.value, self._ypos.value File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) ValueError: could not convert string to float: '0.0.11' ValueError: could not convert string to float: '0.0.11' File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) See log for complete Python traceback. Traceback (most recent call last): File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 65, in _update_scalebar self._show_scalebar() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 70, in _show_scalebar options = self._changed_options() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 92, in _changed_options xpos, ypos = self._xpos.value, self._ypos.value File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) ValueError: could not convert string to float: '0.0.1' ValueError: could not convert string to float: '0.0.1' File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) See log for complete Python traceback. > scalebar off Traceback (most recent call last): File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 65, in _update_scalebar self._show_scalebar() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 70, in _show_scalebar options = self._changed_options() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 92, in _changed_options xpos, ypos = self._xpos.value, self._ypos.value File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) ValueError: could not convert string to float: '0.0.1' ValueError: could not convert string to float: '0.0.1' File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) See log for complete Python traceback. Traceback (most recent call last): File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 65, in _update_scalebar self._show_scalebar() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 70, in _show_scalebar options = self._changed_options() File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/label/scalebar_gui.py", line 92, in _changed_options xpos, ypos = self._xpos.value, self._ypos.value File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) ValueError: could not convert string to float: '0.0.1' ValueError: could not convert string to float: '0.0.1' File "/usr/lib/ucsf-chimerax/lib/python3.9/site- packages/chimerax/ui/widgets/composite.py", line 185, in _get_value return self.string_to_value(self._line_edit.text()) See log for complete Python traceback. OpenGL version: 3.3.0 NVIDIA 545.23.08 OpenGL renderer: NVIDIA GeForce RTX 3060/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation Python: 3.9.11 Locale: en_AU.UTF-8 Qt version: PyQt6 6.4.2, Qt 6.4.2 Qt runtime version: 6.4.3 Qt platform: xcb XDG_SESSION_TYPE=x11 DESKTOP_SESSION=ubuntu XDG_SESSION_DESKTOP=ubuntu XDG_CURRENT_DESKTOP=ubuntu:GNOME DISPLAY=:1 Manufacturer: Micro-Star International Co., Ltd. Model: MS-7C56 OS: Ubuntu 22.04 Jammy Jellyfish Architecture: 64bit ELF Virtual Machine: none CPU: 16 AMD Ryzen 7 5800X 8-Core Processor Cache Size: 512 KB Memory: total used free shared buff/cache available Mem: 62Gi 14Gi 14Gi 446Mi 34Gi 47Gi Swap: 2.0Gi 700Mi 1.3Gi Graphics: 2b:00.0 VGA compatible controller [0300]: NVIDIA Corporation GA106 [GeForce RTX 3060 Lite Hash Rate] [10de:2504] (rev a1) Subsystem: Gigabyte Technology Co., Ltd GA106 [GeForce RTX 3060 Lite Hash Rate] [1458:4073] Kernel driver in use: nvidia Installed Packages: alabaster: 0.7.13 appdirs: 1.4.4 asttokens: 2.2.1 Babel: 2.12.1 backcall: 0.2.0 beautifulsoup4: 4.11.2 blockdiag: 3.0.0 build: 0.10.0 certifi: 2023.5.7 cftime: 1.6.2 charset-normalizer: 3.1.0 ChimeraX-AddCharge: 1.5.9.1 ChimeraX-AddH: 2.2.5 ChimeraX-AlignmentAlgorithms: 2.0.1 ChimeraX-AlignmentHdrs: 3.3.1 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.9.3 ChimeraX-AlphaFold: 1.0 ChimeraX-AltlocExplorer: 1.0.3 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.1 ChimeraX-ArtiaX: 0.3 ChimeraX-Atomic: 1.43.10 ChimeraX-AtomicLibrary: 10.0.6 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.3.2 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.1.2 ChimeraX-BondRot: 2.0.1 ChimeraX-BugReporter: 1.0.1 ChimeraX-BuildStructure: 2.8 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.2.2 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.3.2 ChimeraX-ChangeChains: 1.0.2 ChimeraX-CheckWaters: 1.3.1 ChimeraX-ChemGroup: 2.0.1 ChimeraX-Clashes: 2.2.4 ChimeraX-ColorActions: 1.0.3 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.3 ChimeraX-CommandLine: 1.2.5 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.6.1 ChimeraX-CoreFormats: 1.1 ChimeraX-coulombic: 1.4.2 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.3 ChimeraX-Dicom: 1.2 ChimeraX-DistMonitor: 1.4 ChimeraX-DockPrep: 1.1.1 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1.1 ChimeraX-Hbonds: 2.4 ChimeraX-Help: 1.2.1 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-Label: 1.1.7 ChimeraX-LinuxSupport: 1.0.1 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.5 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.2 ChimeraX-Map: 1.1.4 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.0.12 ChimeraX-MDcrds: 2.6 ChimeraX-MedicalToolbar: 1.0.2 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.12 ChimeraX-MMTF: 2.2 ChimeraX-Modeller: 1.5.9 ChimeraX-ModelPanel: 1.3.7 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.0 ChimeraX-NRRD: 1.0 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.10.1 ChimeraX-PDB: 2.7.2 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.2 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1 ChimeraX-PubChem: 2.1 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.1 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 3.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.1 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.8.3 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.1.1 ChimeraX-ShowSequences: 1.0.1 ChimeraX-SideView: 1.0.1 ChimeraX-Smiles: 2.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.10.3 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.1.2 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.2.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.1.2 ChimeraX-ToolshedUtils: 1.2.1 ChimeraX-Topography: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.28.4 ChimeraX-uniprot: 2.2.2 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.2 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.1 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.1.3 contourpy: 1.0.7 cxservices: 1.2.2 cycler: 0.11.0 Cython: 0.29.33 debugpy: 1.6.7 decorator: 5.1.1 distro: 1.7.0 docutils: 0.19 executing: 1.2.0 filelock: 3.9.0 fonttools: 4.39.3 funcparserlib: 1.0.1 geomdl: 5.3.1 grako: 3.16.5 h5py: 3.8.0 html2text: 2020.1.16 idna: 3.4 ihm: 0.35 imagecodecs: 2022.9.26 imagesize: 1.4.1 importlib-metadata: 6.6.0 ipykernel: 6.21.1 ipython: 8.10.0 ipython-genutils: 0.2.0 ipywidgets: 8.0.6 jedi: 0.18.2 Jinja2: 3.1.2 jupyter-client: 8.0.2 jupyter-core: 5.3.0 jupyterlab-widgets: 3.0.7 kiwisolver: 1.4.4 line-profiler: 4.0.2 lxml: 4.9.2 lz4: 4.3.2 MarkupSafe: 2.1.2 matplotlib: 3.6.3 matplotlib-inline: 0.1.6 msgpack: 1.0.4 nest-asyncio: 1.5.6 netCDF4: 1.6.2 networkx: 2.8.8 nibabel: 5.0.1 nptyping: 2.5.0 numexpr: 2.8.4 numpy: 1.23.5 openvr: 1.23.701 packaging: 23.1 pandas: 2.2.3 ParmEd: 3.4.3 parso: 0.8.3 pep517: 0.13.0 pexpect: 4.8.0 pickleshare: 0.7.5 Pillow: 9.3.0 pip: 23.0 pkginfo: 1.9.6 platformdirs: 3.5.0 prompt-toolkit: 3.0.38 psutil: 5.9.4 ptyprocess: 0.7.0 pure-eval: 0.2.2 pyarrow: 18.1.0 pycollada: 0.7.2 pydicom: 2.3.0 Pygments: 2.14.0 pynrrd: 1.0.0 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 3.0.9 pyproject-hooks: 1.0.0 PyQt6-commercial: 6.4.2 PyQt6-Qt6: 6.4.3 PyQt6-sip: 13.4.1 PyQt6-WebEngine-commercial: 6.4.0 PyQt6-WebEngine-Qt6: 6.4.3 python-dateutil: 2.8.2 pytz: 2023.3 pyzmq: 25.0.2 qtconsole: 5.4.0 QtPy: 2.3.1 RandomWords: 0.4.0 requests: 2.28.2 scipy: 1.9.3 setuptools: 67.4.0 sfftk-rw: 0.7.3 six: 1.16.0 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.4.1 sphinx: 6.1.3 sphinx-autodoc-typehints: 1.22 sphinxcontrib-applehelp: 1.0.4 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.1 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 stack-data: 0.6.2 starfile: 0.5.11 superqt: 0.7.1 tables: 3.7.0 tcia-utils: 1.2.0 tifffile: 2022.10.10 tinyarray: 1.2.4 tomli: 2.0.1 tornado: 6.3.1 traitlets: 5.9.0 typing-extensions: 4.5.0 tzdata: 2023.3 urllib3: 1.26.15 wcwidth: 0.2.6 webcolors: 1.12 wheel: 0.38.4 wheel-filename: 1.4.1 widgetsnbextension: 4.0.7 zipp: 3.15.0
Change History (2)
comment:1 by , 9 months ago
Component: | Unassigned → Volume Data |
---|---|
Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → assigned |
Summary: | ChimeraX bug report submission → Scalebar: "could not convert string to float" for various values |
comment:2 by , 9 months ago
Resolution: | → fixed |
---|---|
Status: | assigned → closed |
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Fixed.
User typed in bad number format in length, x, y, or thickness scalebar panel fields and that generated a traceback. Now it gives a user-friendly error message.
Also noticed that only integer length and thickness were allowed. Now it allows float values.