| 3735 | | > view matrix models |
| 3736 | | > #4,-0.53385,0.83994,-0.097442,136.55,-0.55789,-0.26328,0.78704,106.38,0.63542,0.47453,0.60915,171.51 |
| 3737 | | |
| 3738 | | > fitmap #4 inMap #1 |
| 3739 | | |
| 3740 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3741 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3742 | | average map value = 0.08353, steps = 116 |
| 3743 | | shifted from previous position = 6.78 |
| 3744 | | rotated from previous position = 8.67 degrees |
| 3745 | | atoms outside contour = 1441, contour level = 0.062298 |
| 3746 | | |
| 3747 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3748 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3749 | | Matrix rotation and translation |
| 3750 | | -0.41951835 0.89069495 -0.17511954 130.89352065 |
| 3751 | | -0.64644330 -0.15770925 0.74648433 127.41017906 |
| 3752 | | 0.63727185 0.42636873 0.64194571 118.46678356 |
| 3753 | | Axis -0.18107755 -0.45953975 -0.86950223 |
| 3754 | | Axis point 67.75275174 -1.31469371 0.00000000 |
| 3755 | | Rotation angle (degrees) 117.88127376 |
| 3756 | | Shift along axis -185.25905321 |
| 3757 | | |
| 3758 | | |
| 3759 | | > view matrix models |
| 3760 | | > #4,-0.41952,0.89069,-0.17512,134.09,-0.64644,-0.15771,0.74648,108.15,0.63727,0.42637,0.64195,170.11 |
| 3761 | | |
| 3762 | | > fitmap #4 inMap #1 |
| 3763 | | |
| 3764 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3765 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3766 | | average map value = 0.08051, steps = 116 |
| 3767 | | shifted from previous position = 2.46 |
| 3768 | | rotated from previous position = 3.79 degrees |
| 3769 | | atoms outside contour = 1551, contour level = 0.062298 |
| 3770 | | |
| 3771 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3772 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3773 | | Matrix rotation and translation |
| 3774 | | -0.38893396 0.89183925 -0.23098296 136.63241130 |
| 3775 | | -0.68260867 -0.11059762 0.72236665 128.64101178 |
| 3776 | | 0.61868876 0.43862389 0.65179237 115.76527285 |
| 3777 | | Axis -0.15663878 -0.46905705 -0.86916614 |
| 3778 | | Axis point 73.65731499 -6.46129467 0.00000000 |
| 3779 | | Rotation angle (degrees) 115.07913392 |
| 3780 | | Shift along axis -182.36116227 |
| 3781 | | |
| 3782 | | |
| 3783 | | > view matrix models |
| 3784 | | > #4,-0.38893,0.89184,-0.23098,142.73,-0.68261,-0.1106,0.72237,102.01,0.61869,0.43862,0.65179,172.1 |
| 3785 | | |
| 3786 | | > fitmap #4 inMap #1 |
| 3787 | | |
| 3788 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3789 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3790 | | average map value = 0.0795, steps = 148 |
| 3791 | | shifted from previous position = 5.87 |
| 3792 | | rotated from previous position = 19.3 degrees |
| 3793 | | atoms outside contour = 1584, contour level = 0.062298 |
| 3794 | | |
| 3795 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3796 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3797 | | Matrix rotation and translation |
| 3798 | | -0.58389004 0.81100332 -0.03668844 138.15149370 |
| 3799 | | -0.63939790 -0.43155392 0.63634231 125.03245013 |
| 3800 | | 0.50024268 0.39501245 0.77053386 118.77215015 |
| 3801 | | Axis -0.15417374 -0.34301879 -0.92658975 |
| 3802 | | Axis point 76.18320836 11.56308119 0.00000000 |
| 3803 | | Rotation angle (degrees) 128.49563793 |
| 3804 | | Shift along axis -174.24086897 |
| 3805 | | |
| 3806 | | |
| 3807 | | > view matrix models |
| 3808 | | > #4,-0.58389,0.811,-0.036688,146.46,-0.6394,-0.43155,0.63634,107.94,0.50024,0.39501,0.77053,168.66 |
| 3809 | | |
| 3810 | | > fitmap #4 inMap #1 |
| 3811 | | |
| 3812 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3813 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3814 | | average map value = 0.07632, steps = 156 |
| 3815 | | shifted from previous position = 5.09 |
| 3816 | | rotated from previous position = 4.65 degrees |
| 3817 | | atoms outside contour = 1615, contour level = 0.062298 |
| 3818 | | |
| 3819 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3820 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3821 | | Matrix rotation and translation |
| 3822 | | -0.56761795 0.82299628 -0.02206790 143.04771956 |
| 3823 | | -0.68078857 -0.45412732 0.57471323 132.79034870 |
| 3824 | | 0.46296521 0.34124112 0.81805728 113.34469173 |
| 3825 | | Axis -0.14617337 -0.30367193 -0.94149706 |
| 3826 | | Axis point 84.38038740 16.74131449 0.00000000 |
| 3827 | | Rotation angle (degrees) 127.00207860 |
| 3828 | | Shift along axis -167.94816239 |
| 3829 | | |
| 3830 | | |
| 3831 | | > view matrix models |
| 3832 | | > #4,-0.56762,0.823,-0.022068,143.03,-0.68079,-0.45413,0.57471,105.6,0.46297,0.34124,0.81806,175.48 |
| 3833 | | |
| 3834 | | > fitmap #4 inMap #1 |
| 3835 | | |
| 3836 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3837 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3838 | | average map value = 0.07811, steps = 104 |
| 3839 | | shifted from previous position = 4.17 |
| 3840 | | rotated from previous position = 7.45 degrees |
| 3841 | | atoms outside contour = 1554, contour level = 0.062298 |
| 3842 | | |
| 3843 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3844 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3845 | | Matrix rotation and translation |
| 3846 | | -0.66142758 0.74978383 0.01837843 141.53026059 |
| 3847 | | -0.59178074 -0.53678474 0.60137983 125.11414387 |
| 3848 | | 0.46077013 0.38689320 0.79875186 120.39624867 |
| 3849 | | Axis -0.15011511 -0.30962154 -0.93893554 |
| 3850 | | Axis point 77.15310040 16.84241860 0.00000000 |
| 3851 | | Rotation angle (degrees) 134.40536411 |
| 3852 | | Shift along axis -173.02818248 |
| 3853 | | |
| 3854 | | |
| 3855 | | > view matrix models |
| 3856 | | > #4,-0.66143,0.74978,0.018378,140.66,-0.59178,-0.53678,0.60138,102.47,0.46077,0.38689,0.79875,174.26 |
| 3857 | | |
| 3858 | | > fitmap #4 inMap #1 |
| 3859 | | |
| 3860 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3861 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3862 | | average map value = 0.07809, steps = 72 |
| 3863 | | shifted from previous position = 0.441 |
| 3864 | | rotated from previous position = 0.549 degrees |
| 3865 | | atoms outside contour = 1564, contour level = 0.062298 |
| 3866 | | |
| 3867 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3868 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3869 | | Matrix rotation and translation |
| 3870 | | -0.65859258 0.75203444 0.02645788 141.52859672 |
| 3871 | | -0.58877509 -0.53687680 0.60424100 125.17153697 |
| 3872 | | 0.46861467 0.38237090 0.79636222 120.54433144 |
| 3873 | | Axis -0.15524508 -0.30938222 -0.93817994 |
| 3874 | | Axis point 76.79088805 17.04204226 0.00000000 |
| 3875 | | Rotation angle (degrees) 134.39119865 |
| 3876 | | Shift along axis -173.78974038 |
| 3877 | | |
| 3878 | | |
| 3879 | | > view matrix models |
| 3880 | | > #4,-0.65859,0.75203,0.026458,139.86,-0.58878,-0.53688,0.60424,102.37,0.46861,0.38237,0.79636,177.02 |
| 3881 | | |
| 3882 | | > fitmap #4 inMap #1 |
| 3883 | | |
| 3884 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3885 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3886 | | average map value = 0.07812, steps = 128 |
| 3887 | | shifted from previous position = 2.52 |
| 3888 | | rotated from previous position = 0.196 degrees |
| 3889 | | atoms outside contour = 1567, contour level = 0.062298 |
| 3890 | | |
| 3891 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3892 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3893 | | Matrix rotation and translation |
| 3894 | | -0.65728571 0.75307178 0.02929815 141.53066384 |
| 3895 | | -0.58808231 -0.53681805 0.60496742 125.19545759 |
| 3896 | | 0.47131167 0.38040672 0.79571103 120.58889412 |
| 3897 | | Axis -0.15705090 -0.30913077 -0.93796225 |
| 3898 | | Axis point 76.68275863 17.11292756 0.00000000 |
| 3899 | | Rotation angle (degrees) 134.36256390 |
| 3900 | | Shift along axis -174.03711715 |
| 3901 | | |
| 3902 | | |
| 3903 | | > ui mousemode right "rotate selected models" |
| 3904 | | |
| 3905 | | > volume #1 step 2 |
| 3906 | | |
| 3907 | | > view matrix models |
| 3908 | | > #4,-0.58591,-0.044136,-0.80917,144.31,-0.57875,-0.67614,0.45594,103.46,-0.56724,0.73545,0.37061,178.45 |
| 3909 | | |
| 3910 | | > fitmap #4 inMap #1 |
| 3911 | | |
| 3912 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3913 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3914 | | average map value = 0.07926, steps = 100 |
| 3915 | | shifted from previous position = 4.15 |
| 3916 | | rotated from previous position = 8.59 degrees |
| 3917 | | atoms outside contour = 1670, contour level = 0.062298 |
| 3918 | | |
| 3919 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3920 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3921 | | Matrix rotation and translation |
| 3922 | | -0.53427260 -0.17319949 -0.82737822 144.68456328 |
| 3923 | | -0.51637777 -0.70806023 0.48166867 127.07722427 |
| 3924 | | -0.66925838 0.68458209 0.28886082 121.09185483 |
| 3925 | | Axis 0.47311241 -0.36867180 -0.80015358 |
| 3926 | | Axis point 114.87458008 23.41914846 0.00000000 |
| 3927 | | Rotation angle (degrees) 167.61701609 |
| 3928 | | Shift along axis -75.28980718 |
| 3929 | | |
| 3930 | | |
| 3931 | | > view matrix models |
| 3932 | | > #4,-0.32105,0.55162,-0.76983,140.38,0.49785,-0.59319,-0.63267,104.68,-0.80565,-0.58638,-0.084182,177.23 |
| 3933 | | |
| 3934 | | > fitmap #4 inMap #1 |
| 3935 | | |
| 3936 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3937 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3938 | | average map value = 0.07731, steps = 60 |
| 3939 | | shifted from previous position = 2.59 |
| 3940 | | rotated from previous position = 3.37 degrees |
| 3941 | | atoms outside contour = 1717, contour level = 0.062298 |
| 3942 | | |
| 3943 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3944 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3945 | | Matrix rotation and translation |
| 3946 | | -0.29925909 0.51732377 -0.80176063 140.12068325 |
| 3947 | | 0.49116272 -0.63687631 -0.59426236 128.16460471 |
| 3948 | | -0.81804840 -0.57163334 -0.06349912 125.07478676 |
| 3949 | | Axis 0.59187084 0.42601298 -0.68425277 |
| 3950 | | Axis point 124.89512391 102.25384969 0.00000000 |
| 3951 | | Rotation angle (degrees) 178.90463760 |
| 3952 | | Shift along axis 51.95036251 |
| 3953 | | |
| 3954 | | |
| 3955 | | > show sel cartoons |
| 3956 | | |
| 3957 | | > hide sel surfaces |
| 3958 | | |
| 3959 | | > fitmap #4 inMap #1 |
| 3960 | | |
| 3961 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3962 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3963 | | average map value = 0.07731, steps = 28 |
| 3964 | | shifted from previous position = 0.0203 |
| 3965 | | rotated from previous position = 0.0701 degrees |
| 3966 | | atoms outside contour = 1723, contour level = 0.062298 |
| 3967 | | |
| 3968 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3969 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3970 | | Matrix rotation and translation |
| 3971 | | -0.29872960 0.51673671 -0.80233646 140.11147402 |
| 3972 | | 0.49205622 -0.63696037 -0.59343253 128.17631261 |
| 3973 | | -0.81770490 -0.57207051 -0.06398460 125.06761915 |
| 3974 | | Axis 0.59209996 0.42597326 -0.68407925 |
| 3975 | | Axis point 124.88045662 102.30694238 0.00000000 |
| 3976 | | Rotation angle (degrees) 178.96637366 |
| 3977 | | Shift along axis 52.00351706 |
| 3978 | | |
| 3979 | | |
| 3980 | | > view matrix models |
| 3981 | | > #4,0.31221,0.49939,-0.80817,137.4,0.89419,-0.44178,0.072446,102.22,-0.32086,-0.74527,-0.58448,179.63 |
| 3982 | | |
| 3983 | | > fitmap #4 inMap #1 |
| 3984 | | |
| 3985 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 3986 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 3987 | | average map value = 0.07878, steps = 64 |
| 3988 | | shifted from previous position = 2.48 |
| 3989 | | rotated from previous position = 11.7 degrees |
| 3990 | | atoms outside contour = 1664, contour level = 0.062298 |
| 3991 | | |
| 3992 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 3993 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 3994 | | Matrix rotation and translation |
| 3995 | | 0.44144760 0.34579979 -0.82797737 140.42013051 |
| 3996 | | 0.83551568 -0.49486732 0.23878838 126.21958790 |
| 3997 | | -0.32716597 -0.79720063 -0.50737913 125.54918848 |
| 3998 | | Axis -0.82841832 -0.40046886 0.39159644 |
| 3999 | | Axis point 0.00000000 65.55290444 79.20024760 |
| 4000 | | Rotation angle (degrees) 141.29716103 |
| 4001 | | Shift along axis -117.70900775 |
| 4002 | | |
| 4003 | | |
| 4004 | | > view matrix models |
| 4005 | | > #4,0.19326,0.38454,-0.90265,140.13,0.82848,-0.55681,-0.059825,104.79,-0.52561,-0.73627,-0.42619,179.72 |
| 4006 | | |
| 4007 | | > fitmap #4 inMap #1 |
| 4008 | | |
| 4009 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4010 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4011 | | average map value = 0.08091, steps = 80 |
| 4012 | | shifted from previous position = 3.26 |
| 4013 | | rotated from previous position = 6.14 degrees |
| 4014 | | atoms outside contour = 1670, contour level = 0.062298 |
| 4015 | | |
| 4016 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4017 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4018 | | Matrix rotation and translation |
| 4019 | | 0.25231447 0.33293239 -0.90856669 138.87332412 |
| 4020 | | 0.84728240 -0.52953820 0.04125310 129.13706952 |
| 4021 | | -0.46738628 -0.78022132 -0.41569791 125.08782050 |
| 4022 | | Axis -0.77140845 -0.41429202 0.48300219 |
| 4023 | | Axis point 0.00000000 59.70337626 89.64343257 |
| 4024 | | Rotation angle (degrees) 147.82879026 |
| 4025 | | Shift along axis -100.21082201 |
| 4026 | | |
| 4027 | | |
| 4028 | | > view matrix models |
| 4029 | | > #4,0.39056,0.51293,-0.76444,136.51,0.89668,-0.39996,0.18975,105.78,-0.20842,-0.75957,-0.61613,178.88 |
| 4030 | | |
| 4031 | | > fitmap #4 inMap #1 |
| 4032 | | |
| 4033 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4034 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4035 | | average map value = 0.07998, steps = 68 |
| 4036 | | shifted from previous position = 2.72 |
| 4037 | | rotated from previous position = 8.58 degrees |
| 4038 | | atoms outside contour = 1642, contour level = 0.062298 |
| 4039 | | |
| 4040 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4041 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4042 | | Matrix rotation and translation |
| 4043 | | 0.27148053 0.54130248 -0.79579517 137.98394982 |
| 4044 | | 0.95219604 -0.27140201 0.14022718 126.86996373 |
| 4045 | | -0.14007509 -0.79582195 -0.58910644 122.24947560 |
| 4046 | | Axis -0.77073319 -0.53991314 0.33832551 |
| 4047 | | Axis point 0.00000000 51.85582703 79.38025956 |
| 4048 | | Rotation angle (degrees) 142.60937150 |
| 4049 | | Shift along axis -133.48745389 |
| 4050 | | |
| 4051 | | |
| 4052 | | > view matrix models |
| 4053 | | > #4,-0.30383,0.85718,-0.41584,136.57,0.52532,-0.2134,-0.82371,108.11,-0.79481,-0.46872,-0.38546,176.61 |
| 4054 | | |
| 4055 | | > view matrix models |
| 4056 | | > #4,0.90695,-0.19809,-0.37175,136.02,-0.2982,-0.92525,-0.23451,110.74,-0.2975,0.32355,-0.89823,174.45 |
| 4057 | | |
| 4058 | | > fitmap #4 inMap #1 |
| 4059 | | |
| 4060 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4061 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4062 | | average map value = 0.08065, steps = 124 |
| 4063 | | shifted from previous position = 2.02 |
| 4064 | | rotated from previous position = 8.29 degrees |
| 4065 | | atoms outside contour = 1637, contour level = 0.062298 |
| 4066 | | |
| 4067 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4068 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4069 | | Matrix rotation and translation |
| 4070 | | 0.93274838 -0.25598225 -0.25387702 135.36057119 |
| 4071 | | -0.30494178 -0.93581993 -0.17678111 131.89341220 |
| 4072 | | -0.19233035 0.24231001 -0.95094421 120.04775943 |
| 4073 | | Axis 0.98284441 -0.14433807 -0.11481895 |
| 4074 | | Axis point 0.00000000 68.66873231 75.96000667 |
| 4075 | | Rotation angle (degrees) 167.68986638 |
| 4076 | | Shift along axis 100.21738272 |
| 4077 | | |
| 4078 | | |
| 4079 | | > view matrix models |
| 4080 | | > #4,0.8769,-0.46312,-0.12868,134.66,-0.46681,-0.88436,0.0017245,109.25,-0.1146,0.058556,-0.99168,174.47 |
| 4081 | | |
| 4082 | | > fitmap #4 inMap #1 |
| 4083 | | |
| 4084 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4085 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4086 | | average map value = 0.0821, steps = 88 |
| 4087 | | shifted from previous position = 2.13 |
| 4088 | | rotated from previous position = 9.61 degrees |
| 4089 | | atoms outside contour = 1618, contour level = 0.062298 |
| 4090 | | |
| 4091 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4092 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4093 | | Matrix rotation and translation |
| 4094 | | 0.92057364 -0.39053232 0.00535586 133.75352804 |
| 4095 | | -0.38959762 -0.91916420 -0.05788669 130.26854913 |
| 4096 | | 0.02752954 0.05120233 -0.99830879 120.65762759 |
| 4097 | | Axis 0.97992653 -0.19918206 0.00839627 |
| 4098 | | Axis point 0.00000000 77.02573034 61.90754404 |
| 4099 | | Rotation angle (degrees) 176.80916285 |
| 4100 | | Shift along axis 106.13454745 |
| 4101 | | |
| 4102 | | |
| 4103 | | > volume #1 color #b2b2b280 |
| 4104 | | |
| 4105 | | > view matrix models |
| 4106 | | > #4,0.61755,-0.43373,0.65614,131.83,-0.13544,-0.88039,-0.45449,108.11,0.77479,0.1918,-0.60243,171.11 |
| 4107 | | |
| 4108 | | > fitmap #4 inMap #1 |
| 4109 | | |
| 4110 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4111 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4112 | | average map value = 0.08198, steps = 116 |
| 4113 | | shifted from previous position = 6.71 |
| 4114 | | rotated from previous position = 18.8 degrees |
| 4115 | | atoms outside contour = 1577, contour level = 0.062298 |
| 4116 | | |
| 4117 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4118 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4119 | | Matrix rotation and translation |
| 4120 | | 0.75997081 -0.22268414 0.61061947 133.29493932 |
| 4121 | | 0.12451102 -0.87219693 -0.47304284 129.18943803 |
| 4122 | | 0.63791956 0.43552760 -0.63511758 123.51286119 |
| 4123 | | Axis 0.93375248 -0.02805674 0.35681806 |
| 4124 | | Axis point 0.00000000 57.60561543 54.89409985 |
| 4125 | | Rotation angle (degrees) 150.88817667 |
| 4126 | | Shift along axis 164.91146460 |
| 4127 | | |
| 4128 | | |
| 4129 | | > ui mousemode right "move picked models" |
| 4130 | | |
| 4131 | | > view matrix models #1,1,0,0,-0.087121,0,1,0,-24.764,0,0,1,55.11 |
| 4132 | | |
| 4133 | | > fitmap #4 inMap #1 |
| 4134 | | |
| 4135 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4136 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4137 | | average map value = 0.08189, steps = 104 |
| 4138 | | shifted from previous position = 3.09 |
| 4139 | | rotated from previous position = 2.68 degrees |
| 4140 | | atoms outside contour = 1568, contour level = 0.062298 |
| 4141 | | |
| 4142 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4143 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4144 | | Matrix rotation and translation |
| 4145 | | 0.78390892 -0.20582880 0.58576557 132.98225117 |
| 4146 | | 0.14075459 -0.85997178 -0.49054734 128.93170950 |
| 4147 | | 0.60471063 0.46699363 -0.64516820 124.03500136 |
| 4148 | | Axis 0.94013852 -0.01860075 0.34028455 |
| 4149 | | Axis point 0.00000000 55.89087802 57.16518357 |
| 4150 | | Rotation angle (degrees) 149.38576465 |
| 4151 | | Shift along axis 164.83070531 |
| 4152 | | |
| 4153 | | |
| 4154 | | > view matrix models #1,1,0,0,-0.99106,0,1,0,-24.456,0,0,1,56.033 |
| 4155 | | |
| 4156 | | > fitmap #4 inMap #1 |
| 4157 | | |
| 4158 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4159 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4160 | | average map value = 0.08197, steps = 68 |
| 4161 | | shifted from previous position = 0.972 |
| 4162 | | rotated from previous position = 2.31 degrees |
| 4163 | | atoms outside contour = 1574, contour level = 0.062298 |
| 4164 | | |
| 4165 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4166 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4167 | | Matrix rotation and translation |
| 4168 | | 0.76301403 -0.22059455 0.60757521 133.26673530 |
| 4169 | | 0.12750662 -0.87012696 -0.47604741 129.15741826 |
| 4170 | | 0.63368103 0.44070072 -0.63579181 123.59548171 |
| 4171 | | Axis 0.93454154 -0.02661252 0.35485756 |
| 4172 | | Axis point 0.00000000 57.35389720 55.22239904 |
| 4173 | | Rotation angle (degrees) 150.62785531 |
| 4174 | | Shift along axis 164.96488658 |
| 4175 | | |
| 4176 | | |
| 4177 | | > view matrix models #1,1,0,0,-1.8841,0,1,0,-24.37,0,0,1,57.177 |
| 4178 | | |
| 4179 | | > view matrix models #1,1,0,0,-0.91262,0,1,0,-23.836,0,0,1,55.262 |
| 4180 | | |
| 4181 | | > fitmap #4 inMap #1 |
| 4182 | | |
| 4183 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4184 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4185 | | average map value = 0.08198, steps = 52 |
| 4186 | | shifted from previous position = 1.06 |
| 4187 | | rotated from previous position = 0.316 degrees |
| 4188 | | atoms outside contour = 1578, contour level = 0.062298 |
| 4189 | | |
| 4190 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4191 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4192 | | Matrix rotation and translation |
| 4193 | | 0.76046052 -0.22230986 0.61014598 133.28948432 |
| 4194 | | 0.12514040 -0.87179704 -0.47361355 129.18372463 |
| 4195 | | 0.63721242 0.43651832 -0.63514729 123.52677024 |
| 4196 | | Axis 0.93387671 -0.02777259 0.35651504 |
| 4197 | | Axis point 0.00000000 57.55889957 54.95114227 |
| 4198 | | Rotation angle (degrees) 150.83758361 |
| 4199 | | Shift along axis 164.92732965 |
| 4200 | | |
| 4201 | | |
| 4202 | | > volume #1 color white |
| 4203 | | |
| 4204 | | > volume #1 color #ffffffa8 |
| 4205 | | |
| 4206 | | [Repeated 1 time(s)] |
| 4207 | | |
| 4208 | | > volume #1 color white |
| 4209 | | |
| 4210 | | > volume #1 color #dfdfdf |
| 4211 | | |
| 4212 | | > volume #1 color #dfdfdfad |
| 4213 | | |
| 4214 | | > view matrix models #1,1,0,0,-0.98163,0,1,0,-23.698,0,0,1,55.21 |
| 4215 | | |
| 4216 | | > ui mousemode right "translate selected models" |
| 4217 | | |
| 4218 | | > view matrix models |
| 4219 | | > #4,0.76046,-0.22231,0.61015,132.75,0.12514,-0.8718,-0.47361,107.27,0.63721,0.43652,-0.63515,176.22 |
| 4220 | | |
| 4221 | | > fitmap #4 inMap #1 |
| 4222 | | |
| 4223 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4224 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4225 | | average map value = 0.08197, steps = 92 |
| 4226 | | shifted from previous position = 3.2 |
| 4227 | | rotated from previous position = 0.384 degrees |
| 4228 | | atoms outside contour = 1572, contour level = 0.062298 |
| 4229 | | |
| 4230 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4231 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4232 | | Matrix rotation and translation |
| 4233 | | 0.76360972 -0.22046753 0.60687253 133.25217655 |
| 4234 | | 0.12777538 -0.86971386 -0.47672974 129.16449722 |
| 4235 | | 0.63290888 0.44157883 -0.63595164 123.60941511 |
| 4236 | | Axis 0.93469649 -0.02650099 0.35445756 |
| 4237 | | Axis point 0.00000000 57.32201330 55.29306988 |
| 4238 | | Rotation angle (degrees) 150.57830769 |
| 4239 | | Shift along axis 164.94164728 |
| 4240 | | |
| 4241 | | |
| 4242 | | > view matrix models |
| 4243 | | > #4,0.76361,-0.22047,0.60687,132.68,0.12778,-0.86971,-0.47673,105.37,0.63291,0.44158,-0.63595,178.38 |
| 4244 | | |
| 4245 | | > view matrix models |
| 4246 | | > #4,0.76361,-0.22047,0.60687,135.84,0.12778,-0.86971,-0.47673,103.82,0.63291,0.44158,-0.63595,175.86 |
| 4247 | | |
| 4248 | | > fitmap #4 inMap #1 |
| 4249 | | |
| 4250 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4251 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4252 | | average map value = 0.08004, steps = 124 |
| 4253 | | shifted from previous position = 2.56 |
| 4254 | | rotated from previous position = 5.12 degrees |
| 4255 | | atoms outside contour = 1589, contour level = 0.062298 |
| 4256 | | |
| 4257 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4258 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4259 | | Matrix rotation and translation |
| 4260 | | 0.79415876 -0.27094206 0.54396899 137.67929232 |
| 4261 | | 0.08098387 -0.83994542 -0.53659417 127.54216482 |
| 4262 | | 0.60229019 0.47019368 -0.64510808 123.13204142 |
| 4263 | | Axis 0.94258155 -0.05460186 0.32948241 |
| 4264 | | Axis point 0.00000000 57.12034144 58.45142246 |
| 4265 | | Rotation angle (degrees) 147.71989912 |
| 4266 | | Shift along axis 163.37976335 |
| 4267 | | |
| 4268 | | |
| 4269 | | > view matrix models |
| 4270 | | > #4,0.79416,-0.27094,0.54397,131.25,0.080984,-0.83995,-0.53659,108.62,0.60229,0.47019,-0.64511,180.4 |
| 4271 | | |
| 4272 | | > fitmap #4 inMap #1 |
| 4273 | | |
| 4274 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4275 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4276 | | average map value = 0.08205, steps = 88 |
| 4277 | | shifted from previous position = 3.7 |
| 4278 | | rotated from previous position = 1.69 degrees |
| 4279 | | atoms outside contour = 1604, contour level = 0.062298 |
| 4280 | | |
| 4281 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4282 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4283 | | Matrix rotation and translation |
| 4284 | | 0.80605320 -0.28289207 0.51985605 132.73587020 |
| 4285 | | 0.06065527 -0.83425730 -0.54802892 128.92211366 |
| 4286 | | 0.58872674 0.47327248 -0.65529687 123.97645781 |
| 4287 | | Axis 0.94588282 -0.06378490 0.31817789 |
| 4288 | | Axis point 0.00000000 57.45576992 61.18907120 |
| 4289 | | Rotation angle (degrees) 147.32543044 |
| 4290 | | Shift along axis 156.77586406 |
| 4291 | | |
| 4292 | | |
| 4293 | | > view matrix models |
| 4294 | | > #4,0.80605,-0.28289,0.51986,133.6,0.060655,-0.83426,-0.54803,105.15,0.58873,0.47327,-0.6553,176.8 |
| 4295 | | |
| 4296 | | > fitmap #4 inMap #1 |
| 4297 | | |
| 4298 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4299 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4300 | | average map value = 0.08205, steps = 84 |
| 4301 | | shifted from previous position = 3.02 |
| 4302 | | rotated from previous position = 0.0231 degrees |
| 4303 | | atoms outside contour = 1609, contour level = 0.062298 |
| 4304 | | |
| 4305 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4306 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4307 | | Matrix rotation and translation |
| 4308 | | 0.80613565 -0.28290936 0.51971877 132.73649227 |
| 4309 | | 0.06036177 -0.83440511 -0.54783625 128.93617914 |
| 4310 | | 0.58864400 0.47300148 -0.65556680 123.98486582 |
| 4311 | | Axis 0.94591155 -0.06386634 0.31807613 |
| 4312 | | Axis point 0.00000000 57.47074907 61.19193845 |
| 4313 | | Rotation angle (degrees) 147.34322742 |
| 4314 | | Shift along axis 156.75892602 |
| 4315 | | |
| 4316 | | |
| 4317 | | > view matrix models |
| 4318 | | > #4,0.80614,-0.28291,0.51972,131.83,0.060362,-0.83441,-0.54784,107.14,0.58864,0.473,-0.65557,177.01 |
| 4319 | | |
| 4320 | | > fitmap #4 inMap #1 |
| 4321 | | |
| 4322 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4323 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4324 | | average map value = 0.08205, steps = 80 |
| 4325 | | shifted from previous position = 2.9 |
| 4326 | | rotated from previous position = 0.0173 degrees |
| 4327 | | atoms outside contour = 1607, contour level = 0.062298 |
| 4328 | | |
| 4329 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4330 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4331 | | Matrix rotation and translation |
| 4332 | | 0.80595709 -0.28303160 0.51992911 132.73811376 |
| 4333 | | 0.06036986 -0.83442095 -0.54781125 128.93701378 |
| 4334 | | 0.58888763 0.47290041 -0.65542090 123.97870324 |
| 4335 | | Axis 0.94586104 -0.06390167 0.31821922 |
| 4336 | | Axis point 0.00000000 57.47900549 61.17775654 |
| 4337 | | Rotation angle (degrees) 147.34580186 |
| 4338 | | Shift along axis 156.76492505 |
| 4339 | | |
| 4340 | | |
| 4341 | | > view matrix models |
| 4342 | | > #4,0.80596,-0.28303,0.51993,134.03,0.06037,-0.83442,-0.54781,105.72,0.58889,0.4729,-0.65542,176.07 |
| 4343 | | |
| 4344 | | > fitmap #4 inMap #1 |
| 4345 | | |
| 4346 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4347 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4348 | | average map value = 0.08188, steps = 112 |
| 4349 | | shifted from previous position = 3.69 |
| 4350 | | rotated from previous position = 5.98 degrees |
| 4351 | | atoms outside contour = 1565, contour level = 0.062298 |
| 4352 | | |
| 4353 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4354 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4355 | | Matrix rotation and translation |
| 4356 | | 0.78420281 -0.20507417 0.58563687 132.97724485 |
| 4357 | | 0.14152124 -0.85982082 -0.49059138 128.91174161 |
| 4358 | | 0.60415039 0.46760319 -0.64525155 124.03619118 |
| 4359 | | Axis 0.94021653 -0.01816617 0.34009245 |
| 4360 | | Axis point 0.00000000 55.84106137 57.18081928 |
| 4361 | | Rotation angle (degrees) 149.36543485 |
| 4362 | | Shift along axis 164.86934316 |
| 4363 | | |
| 4364 | | |
| 4365 | | > view matrix models |
| 4366 | | > #4,0.7842,-0.20507,0.58564,130.98,0.14152,-0.85982,-0.49059,106.4,0.60415,0.4676,-0.64525,180.25 |
| 4367 | | |
| 4368 | | > view matrix models |
| 4369 | | > #4,0.7842,-0.20507,0.58564,129.61,0.14152,-0.85982,-0.49059,103.04,0.60415,0.4676,-0.64525,182.99 |
| 4370 | | |
| 4371 | | > fitmap #4 inMap #1 |
| 4372 | | |
| 4373 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4374 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4375 | | average map value = 0.08353, steps = 136 |
| 4376 | | shifted from previous position = 3.26 |
| 4377 | | rotated from previous position = 17 degrees |
| 4378 | | atoms outside contour = 1560, contour level = 0.062298 |
| 4379 | | |
| 4380 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4381 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4382 | | Matrix rotation and translation |
| 4383 | | 0.61272448 -0.26984598 0.74280001 130.26409313 |
| 4384 | | 0.03970360 -0.92820275 -0.36995038 127.40072253 |
| 4385 | | 0.78929864 0.25616949 -0.55801869 124.46919827 |
| 4386 | | Axis 0.89444860 -0.06642598 0.44220955 |
| 4387 | | Axis point 0.00000000 63.24912688 43.99837168 |
| 4388 | | Rotation angle (degrees) 159.51248492 |
| 4389 | | Shift along axis 163.09328610 |
| 4390 | | |
| 4391 | | |
| 4392 | | > ui mousemode right "rotate selected models" |
| 4393 | | |
| 4394 | | > view matrix models |
| 4395 | | > #4,-0.19863,0.41786,0.88653,129.23,0.94269,-0.16598,0.28944,97.258,0.2681,0.89322,-0.36094,178.81 |
| 4396 | | |
| 4397 | | > fitmap #4 inMap #1 |
| 4398 | | |
| 4399 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4400 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4401 | | average map value = 0.07928, steps = 112 |
| 4402 | | shifted from previous position = 2.71 |
| 4403 | | rotated from previous position = 9 degrees |
| 4404 | | atoms outside contour = 1666, contour level = 0.062298 |
| 4405 | | |
| 4406 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4407 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4408 | | Matrix rotation and translation |
| 4409 | | -0.22214844 0.48811014 0.84403706 129.84876010 |
| 4410 | | 0.96210270 -0.03066633 0.27095749 120.32086610 |
| 4411 | | 0.15814062 0.87224312 -0.46279961 126.76528086 |
| 4412 | | Axis 0.58494051 0.66725128 0.46110772 |
| 4413 | | Axis point 17.94216561 0.00000000 20.92372576 |
| 4414 | | Rotation angle (degrees) 149.07125895 |
| 4415 | | Shift along axis 214.69050147 |
| 4416 | | |
| 4417 | | |
| 4418 | | > view matrix models |
| 4419 | | > #4,-0.74573,0.66609,0.01436,132.13,0.6641,0.74143,0.096216,95.793,0.053442,0.081288,-0.99526,185.93 |
| 4420 | | |
| 4421 | | > fitmap #4 inMap #1 |
| 4422 | | |
| 4423 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4424 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4425 | | average map value = 0.08301, steps = 220 |
| 4426 | | shifted from previous position = 5.89 |
| 4427 | | rotated from previous position = 16.3 degrees |
| 4428 | | atoms outside contour = 1558, contour level = 0.062298 |
| 4429 | | |
| 4430 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4431 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4432 | | Matrix rotation and translation |
| 4433 | | -0.81403154 0.55395083 0.17461710 127.92134088 |
| 4434 | | 0.57999965 0.75929606 0.29507608 120.08197800 |
| 4435 | | 0.03087156 0.34147910 -0.93938223 127.52888958 |
| 4436 | | Axis 0.30273492 0.93780104 0.16994347 |
| 4437 | | Axis point 46.58637018 0.00000000 51.33842540 |
| 4438 | | Rotation angle (degrees) 175.60455968 |
| 4439 | | Shift along axis 173.01196286 |
| 4440 | | |
| 4441 | | |
| 4442 | | > view matrix models |
| 4443 | | > #4,-0.96982,0.082214,-0.22955,129.8,0.1345,0.96564,-0.22239,98.481,0.20338,-0.24655,-0.94755,183.91 |
| 4444 | | |
| 4445 | | > fitmap #4 inMap #1 |
| 4446 | | |
| 4447 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4448 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4449 | | average map value = 0.0826, steps = 120 |
| 4450 | | shifted from previous position = 2.87 |
| 4451 | | rotated from previous position = 9.2 degrees |
| 4452 | | atoms outside contour = 1605, contour level = 0.062298 |
| 4453 | | |
| 4454 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4455 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4456 | | Matrix rotation and translation |
| 4457 | | -0.93375408 0.19379695 -0.30090873 129.86104251 |
| 4458 | | 0.27716758 0.92345689 -0.26534036 124.72969617 |
| 4459 | | 0.22645409 -0.33116479 -0.91599587 128.04969593 |
| 4460 | | Axis -0.12236058 -0.98031117 0.15497710 |
| 4461 | | Axis point 46.91639790 0.00000000 81.94738149 |
| 4462 | | Rotation angle (degrees) 164.39658310 |
| 4463 | | Shift along axis -118.31901657 |
| 4464 | | |
| 4465 | | |
| 4466 | | > view matrix models |
| 4467 | | > #4,-0.75431,0.65208,0.076219,126.07,0.64974,0.72484,0.22901,99.179,0.094083,0.22226,-0.97044,182.24 |
| 4468 | | |
| 4469 | | > fitmap #4 inMap #1 |
| 4470 | | |
| 4471 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4472 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4473 | | average map value = 0.08344, steps = 204 |
| 4474 | | shifted from previous position = 1.46 |
| 4475 | | rotated from previous position = 10.1 degrees |
| 4476 | | atoms outside contour = 1572, contour level = 0.062298 |
| 4477 | | |
| 4478 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4479 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4480 | | Matrix rotation and translation |
| 4481 | | -0.77642979 0.58590091 0.23211396 126.96634252 |
| 4482 | | 0.63017002 0.72561950 0.27633689 121.35484834 |
| 4483 | | -0.00652038 0.36082746 -0.93260979 126.92573813 |
| 4484 | | Axis 0.32876762 0.92856811 0.17225887 |
| 4485 | | Axis point 45.35413622 0.00000000 49.80934191 |
| 4486 | | Rotation angle (degrees) 172.61731667 |
| 4487 | | Shift along axis 176.29274872 |
| 4488 | | |
| 4489 | | |
| 4490 | | > ui mousemode right "move picked models" |
| 4491 | | |
| 4492 | | > view matrix models #1,1,0,0,-2.6434,0,1,0,-23.276,0,0,1,58.685 |
| 4493 | | |
| 4494 | | > fitmap #4 inMap #1 |
| 4495 | | |
| 4496 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4497 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4498 | | average map value = 0.08491, steps = 120 |
| 4499 | | shifted from previous position = 4.23 |
| 4500 | | rotated from previous position = 8.87 degrees |
| 4501 | | atoms outside contour = 1564, contour level = 0.062298 |
| 4502 | | |
| 4503 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4504 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4505 | | Matrix rotation and translation |
| 4506 | | -0.72789195 0.57813546 0.36869052 131.06216164 |
| 4507 | | 0.68223238 0.66456337 0.30481881 123.28662538 |
| 4508 | | -0.06879165 0.47340777 -0.87815306 121.16572218 |
| 4509 | | Axis 0.35103732 0.91092898 0.21675146 |
| 4510 | | Axis point 47.20405511 0.00000000 41.48297582 |
| 4511 | | Rotation angle (degrees) 166.10580578 |
| 4512 | | Shift along axis 184.57591670 |
| 4513 | | |
| 4514 | | |
| 4515 | | > view matrix models #1,1,0,0,-4.2852,0,1,0,-21.733,0,0,1,61.008 |
| 4516 | | |
| 4517 | | > view matrix models #1,1,0,0,2.6703,0,1,0,-20.076,0,0,1,62.339 |
| 4518 | | |
| 4519 | | > fitmap #4 inMap #1 |
| 4520 | | |
| 4521 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4522 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4523 | | average map value = 0.08176, steps = 152 |
| 4524 | | shifted from previous position = 4.92 |
| 4525 | | rotated from previous position = 9.19 degrees |
| 4526 | | atoms outside contour = 1580, contour level = 0.062298 |
| 4527 | | |
| 4528 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4529 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4530 | | Matrix rotation and translation |
| 4531 | | -0.63452151 0.62077504 0.46045718 127.33291024 |
| 4532 | | 0.77119855 0.54807235 0.32383561 120.81345476 |
| 4533 | | -0.05133478 0.56058457 -0.82650450 121.58358229 |
| 4534 | | Axis 0.40565838 0.87693184 0.25774372 |
| 4535 | | Axis point 41.92133056 0.00000000 38.72666725 |
| 4536 | | Rotation angle (degrees) 163.03375334 |
| 4537 | | Shift along axis 188.93623240 |
| 4538 | | |
| 4539 | | |
| 4540 | | > view matrix models #1,1,0,0,-20.849,0,1,0,-24.903,0,0,1,60.169 |
| 4541 | | |
| 4542 | | > fitmap #4 inMap #1 |
| 4543 | | |
| 4544 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4545 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4546 | | average map value = 0.07841, steps = 116 |
| 4547 | | shifted from previous position = 2.39 |
| 4548 | | rotated from previous position = 12.6 degrees |
| 4549 | | atoms outside contour = 1717, contour level = 0.062298 |
| 4550 | | |
| 4551 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4552 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4553 | | Matrix rotation and translation |
| 4554 | | -0.58450994 0.52327035 0.62010989 148.50655797 |
| 4555 | | 0.77248244 0.59269541 0.22799787 126.19581250 |
| 4556 | | -0.24823176 0.61229102 -0.75065352 124.93824464 |
| 4557 | | Axis 0.39144255 0.88449630 0.25384844 |
| 4558 | | Axis point 57.27188115 0.00000000 34.03271257 |
| 4559 | | Rotation angle (degrees) 150.60235913 |
| 4560 | | Shift along axis 201.46689323 |
| 4561 | | |
| 4562 | | |
| 4563 | | > view matrix models #1,1,0,0,-9.7298,0,1,0,-21.152,0,0,1,65.604 |
| 4564 | | |
| 4565 | | > fitmap #4 inMap #1 |
| 4566 | | |
| 4567 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4568 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4569 | | average map value = 0.08089, steps = 80 |
| 4570 | | shifted from previous position = 3.5 |
| 4571 | | rotated from previous position = 3.67 degrees |
| 4572 | | atoms outside contour = 1611, contour level = 0.062298 |
| 4573 | | |
| 4574 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4575 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4576 | | Matrix rotation and translation |
| 4577 | | -0.53596834 0.55683418 0.63456571 136.77326940 |
| 4578 | | 0.80134443 0.57208694 0.17482458 124.68527718 |
| 4579 | | -0.26567845 0.60220614 -0.75283646 122.30330757 |
| 4580 | | Axis 0.41651091 0.87734603 0.23829102 |
| 4581 | | Axis point 50.70308139 0.00000000 35.51151015 |
| 4582 | | Rotation angle (degrees) 149.13281972 |
| 4583 | | Shift along axis 195.50347134 |
| 4584 | | |
| 4585 | | |
| 4586 | | > view matrix models #1,1,0,0,-10.503,0,1,0,-18.106,0,0,1,75.153 |
| 4587 | | |
| 4588 | | > fitmap #4 inMap #1 |
| 4589 | | |
| 4590 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4591 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4592 | | average map value = 0.08562, steps = 176 |
| 4593 | | shifted from previous position = 8.95 |
| 4594 | | rotated from previous position = 25 degrees |
| 4595 | | atoms outside contour = 1538, contour level = 0.062298 |
| 4596 | | |
| 4597 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4598 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4599 | | Matrix rotation and translation |
| 4600 | | -0.71951256 0.64253543 0.26353348 133.78322705 |
| 4601 | | 0.68989405 0.70483513 0.16508675 121.27500758 |
| 4602 | | -0.07967357 0.30059217 -0.95041910 120.99098749 |
| 4603 | | Axis 0.36424657 0.92256081 0.12730276 |
| 4604 | | Axis point 47.96352149 0.00000000 48.58556962 |
| 4605 | | Rotation angle (degrees) 169.28010392 |
| 4606 | | Shift along axis 176.01613661 |
| 4607 | | |
| 4608 | | |
| 4609 | | > view matrix models #1,1,0,0,-16.503,0,1,0,-16.303,0,0,1,83.706 |
| 4610 | | |
| 4611 | | > fitmap #4 inMap #1 |
| 4612 | | |
| 4613 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4614 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4615 | | average map value = 0.07854, steps = 92 |
| 4616 | | shifted from previous position = 9.65 |
| 4617 | | rotated from previous position = 4.35 degrees |
| 4618 | | atoms outside contour = 1696, contour level = 0.062298 |
| 4619 | | |
| 4620 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4621 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4622 | | Matrix rotation and translation |
| 4623 | | -0.67482817 0.69602084 0.24527931 143.26270411 |
| 4624 | | 0.73683027 0.65398132 0.17143392 125.95957579 |
| 4625 | | -0.04108651 0.29641766 -0.95417423 118.51716810 |
| 4626 | | Axis 0.39664043 0.90879232 0.12951021 |
| 4627 | | Axis point 48.25868425 0.00000000 47.26399207 |
| 4628 | | Rotation angle (degrees) 170.93511096 |
| 4629 | | Shift along axis 186.64405893 |
| 4630 | | |
| 4631 | | |
| 4632 | | > view matrix models #1,1,0,0,-19.817,0,1,0,-16.46,0,0,1,84.972 |
| 4633 | | |
| 4634 | | > fitmap #4 inMap #1 |
| 4635 | | |
| 4636 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4637 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4638 | | average map value = 0.07854, steps = 64 |
| 4639 | | shifted from previous position = 3.56 |
| 4640 | | rotated from previous position = 0.0338 degrees |
| 4641 | | atoms outside contour = 1693, contour level = 0.062298 |
| 4642 | | |
| 4643 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4644 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4645 | | Matrix rotation and translation |
| 4646 | | -0.67466231 0.69624038 0.24511244 143.25519178 |
| 4647 | | 0.73696996 0.65396272 0.17090361 125.95969460 |
| 4648 | | -0.04130440 0.29594273 -0.95431224 118.52469293 |
| 4649 | | Axis 0.39674314 0.90878694 0.12923301 |
| 4650 | | Axis point 48.25111501 0.00000000 47.28712830 |
| 4651 | | Rotation angle (degrees) 170.93342821 |
| 4652 | | Shift along axis 186.62334331 |
| 4653 | | |
| 4654 | | |
| 4655 | | > view matrix models #1,1,0,0,-17.784,0,1,0,-17.477,0,0,1,80.856 |
| 4656 | | |
| 4657 | | > fitmap #4 inMap #1 |
| 4658 | | |
| 4659 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4660 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4661 | | average map value = 0.08031, steps = 232 |
| 4662 | | shifted from previous position = 2.69 |
| 4663 | | rotated from previous position = 8.59 degrees |
| 4664 | | atoms outside contour = 1602, contour level = 0.062298 |
| 4665 | | |
| 4666 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4667 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4668 | | Matrix rotation and translation |
| 4669 | | -0.72689193 0.66813109 0.15883631 139.55789771 |
| 4670 | | 0.68400043 0.72503227 0.08044631 125.84678154 |
| 4671 | | -0.06141277 0.16711988 -0.98402206 121.79067230 |
| 4672 | | Axis 0.36537056 0.92845525 0.06689689 |
| 4673 | | Axis point 48.54316636 0.00000000 53.94946499 |
| 4674 | | Rotation angle (degrees) 173.18808267 |
| 4675 | | Shift along axis 175.98087033 |
| 4676 | | |
| 4677 | | |
| 4678 | | > ui mousemode right "rotate selected models" |
| 4679 | | |
| 4680 | | > view matrix models |
| 4681 | | > #4,0.44219,0.51077,0.73728,117.37,0.80826,0.12942,-0.57443,111.49,-0.38882,0.84992,-0.35561,199.92 |
| 4682 | | |
| 4683 | | > fitmap #4 inMap #1 |
| 4684 | | |
| 4685 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4686 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4687 | | average map value = 0.07821, steps = 104 |
| 4688 | | shifted from previous position = 1.37 |
| 4689 | | rotated from previous position = 1.39 degrees |
| 4690 | | atoms outside contour = 1662, contour level = 0.062298 |
| 4691 | | |
| 4692 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4693 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4694 | | Matrix rotation and translation |
| 4695 | | 0.45312260 0.49621810 0.74057242 134.40383349 |
| 4696 | | 0.79988824 0.14040591 -0.58349377 127.83909875 |
| 4697 | | -0.39352091 0.85676939 -0.33329793 118.91716119 |
| 4698 | | Axis 0.77510375 0.61033290 0.16342560 |
| 4699 | | Axis point 0.00000000 -26.60624182 47.37827585 |
| 4700 | | Rotation angle (degrees) 111.70850721 |
| 4701 | | Shift along axis 201.63543143 |
| 4702 | | |
| 4703 | | |
| 4704 | | > view matrix models |
| 4705 | | > #4,0.16924,-0.62961,0.75825,120.48,-0.35159,-0.7573,-0.55035,115.95,0.92073,-0.17346,-0.34953,199.03 |
| 4706 | | |
| 4707 | | > fitmap #4 inMap #1 |
| 4708 | | |
| 4709 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4710 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4711 | | average map value = 0.07999, steps = 124 |
| 4712 | | shifted from previous position = 1.26 |
| 4713 | | rotated from previous position = 7.33 degrees |
| 4714 | | atoms outside contour = 1641, contour level = 0.062298 |
| 4715 | | |
| 4716 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4717 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4718 | | Matrix rotation and translation |
| 4719 | | 0.08696515 -0.68140554 0.72672110 138.82153367 |
| 4720 | | -0.29031255 -0.71515706 -0.63582152 134.47095419 |
| 4721 | | 0.95297203 -0.15568194 -0.26001432 118.49544340 |
| 4722 | | Axis 0.72825598 -0.34316812 0.59319378 |
| 4723 | | Axis point 0.00000000 94.79718527 23.36824392 |
| 4724 | | Rotation angle (degrees) 160.75244976 |
| 4725 | | Shift along axis 125.24222873 |
| 4726 | | |
| 4727 | | |
| 4728 | | > view matrix models |
| 4729 | | > #4,-0.42865,-0.88063,-0.20188,125.59,0.50995,-0.051372,-0.85867,113.55,0.7458,-0.47102,0.4711,198.77 |
| 4730 | | |
| 4731 | | > fitmap #4 inMap #1 |
| 4732 | | |
| 4733 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4734 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4735 | | average map value = 0.07913, steps = 152 |
| 4736 | | shifted from previous position = 2.01 |
| 4737 | | rotated from previous position = 25.5 degrees |
| 4738 | | atoms outside contour = 1678, contour level = 0.062298 |
| 4739 | | |
| 4740 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4741 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4742 | | Matrix rotation and translation |
| 4743 | | -0.23711708 -0.77660499 -0.58366101 145.46851126 |
| 4744 | | 0.62697539 0.33659048 -0.70257292 129.10639930 |
| 4745 | | 0.74207638 -0.53253313 0.40710087 117.85498002 |
| 4746 | | Axis 0.08773181 -0.68401246 0.72417545 |
| 4747 | | Axis point -7.29214284 197.82259700 0.00000000 |
| 4748 | | Rotation angle (degrees) 104.28308140 |
| 4749 | | Shift along axis 9.79951295 |
| 4750 | | |
| 4751 | | |
| 4752 | | > view matrix models |
| 4753 | | > #4,0.10299,-0.98667,-0.12602,126.06,-0.67299,0.024168,-0.73925,116.2,0.73244,0.16095,-0.66153,199.78 |
| 4754 | | |
| 4755 | | > fitmap #4 inMap #1 |
| 4756 | | |
| 4757 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4758 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4759 | | average map value = 0.08313, steps = 100 |
| 4760 | | shifted from previous position = 4.38 |
| 4761 | | rotated from previous position = 7.29 degrees |
| 4762 | | atoms outside contour = 1578, contour level = 0.062298 |
| 4763 | | |
| 4764 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4765 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4766 | | Matrix rotation and translation |
| 4767 | | 0.21423234 -0.96613610 -0.14382470 142.97748314 |
| 4768 | | -0.62256222 -0.02159414 -0.78227231 133.37616336 |
| 4769 | | 0.75267575 0.25712785 -0.60610600 122.87148048 |
| 4770 | | Axis 0.73457974 -0.63358761 0.24281544 |
| 4771 | | Axis point 0.00000000 97.13027132 84.43943665 |
| 4772 | | Rotation angle (degrees) 134.96979416 |
| 4773 | | Shift along axis 50.35797059 |
| 4774 | | |
| 4775 | | |
| 4776 | | > view matrix models |
| 4777 | | > #4,0.53009,-0.57935,-0.61916,124.56,-0.62861,0.22156,-0.7455,115.14,0.56908,0.78439,-0.24674,201.78 |
| 4778 | | |
| 4779 | | > fitmap #4 inMap #1 |
| 4780 | | |
| 4781 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4782 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4783 | | average map value = 0.07802, steps = 104 |
| 4784 | | shifted from previous position = 3.98 |
| 4785 | | rotated from previous position = 17.9 degrees |
| 4786 | | atoms outside contour = 1664, contour level = 0.062298 |
| 4787 | | |
| 4788 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4789 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4790 | | Matrix rotation and translation |
| 4791 | | 0.41005560 -0.77178476 -0.48600689 145.75457079 |
| 4792 | | -0.70317381 0.07184716 -0.70737867 135.52977459 |
| 4793 | | 0.58086229 0.63181190 -0.51323750 122.38005186 |
| 4794 | | Axis 0.78151725 -0.62259748 0.04003959 |
| 4795 | | Axis point 0.00000000 82.06124357 114.22449458 |
| 4796 | | Rotation angle (degrees) 121.04207327 |
| 4797 | | Shift along axis 34.42926286 |
| 4798 | | |
| 4799 | | |
| 4800 | | > view matrix models |
| 4801 | | > #4,-0.05488,-0.41767,-0.90694,129.44,0.97275,0.18255,-0.14293,111.54,0.22526,-0.89007,0.39627,205.92 |
| 4802 | | |
| 4803 | | > fitmap #4 inMap #1 |
| 4804 | | |
| 4805 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4806 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4807 | | average map value = 0.07809, steps = 80 |
| 4808 | | shifted from previous position = 1.28 |
| 4809 | | rotated from previous position = 4.43 degrees |
| 4810 | | atoms outside contour = 1675, contour level = 0.062298 |
| 4811 | | |
| 4812 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4813 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4814 | | Matrix rotation and translation |
| 4815 | | -0.01152083 -0.44914782 -0.89338318 148.15912847 |
| 4816 | | 0.96021129 0.24435057 -0.13522972 128.09804463 |
| 4817 | | 0.27903682 -0.85939457 0.42846169 125.02495229 |
| 4818 | | Axis -0.36738928 -0.59480177 0.71500767 |
| 4819 | | Axis point 45.15601745 194.44593494 0.00000000 |
| 4820 | | Rotation angle (degrees) 99.75027825 |
| 4821 | | Shift along axis -41.23121836 |
| 4822 | | |
| 4823 | | |
| 4824 | | > view matrix models |
| 4825 | | > #4,-0.20344,-0.34698,-0.91554,130.69,0.96438,0.090488,-0.24858,111.35,0.1691,-0.9335,0.31621,206.7 |
| 4826 | | |
| 4827 | | > fitmap #4 inMap #1 |
| 4828 | | |
| 4829 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4830 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4831 | | average map value = 0.08059, steps = 124 |
| 4832 | | shifted from previous position = 0.978 |
| 4833 | | rotated from previous position = 14.4 degrees |
| 4834 | | atoms outside contour = 1616, contour level = 0.062298 |
| 4835 | | |
| 4836 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4837 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4838 | | Matrix rotation and translation |
| 4839 | | -0.36670221 -0.44018219 -0.81961523 149.14561745 |
| 4840 | | 0.92776241 -0.10750804 -0.35734987 128.80247952 |
| 4841 | | 0.06918382 -0.89144919 0.44780792 125.16453124 |
| 4842 | | Axis -0.31114937 -0.51778622 0.79692126 |
| 4843 | | Axis point 55.63186156 156.65973911 0.00000000 |
| 4844 | | Rotation angle (degrees) 120.87729384 |
| 4845 | | Shift along axis -13.35243841 |
| 4846 | | |
| 4847 | | |
| 4848 | | > view matrix models |
| 4849 | | > #4,-0.41065,-0.40261,-0.81809,131.37,0.91148,-0.15785,-0.37984,111.57,0.023794,-0.90166,0.4318,206.22 |
| 4850 | | |
| 4851 | | > fitmap #4 inMap #1 |
| 4852 | | |
| 4853 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4854 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4855 | | average map value = 0.08059, steps = 60 |
| 4856 | | shifted from previous position = 0.0822 |
| 4857 | | rotated from previous position = 3.85 degrees |
| 4858 | | atoms outside contour = 1611, contour level = 0.062298 |
| 4859 | | |
| 4860 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4861 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4862 | | Matrix rotation and translation |
| 4863 | | -0.36684788 -0.43980622 -0.81975186 149.15089910 |
| 4864 | | 0.92769379 -0.10727851 -0.35759692 128.80379218 |
| 4865 | | 0.06933159 -0.89166238 0.44736039 125.15266571 |
| 4866 | | Axis -0.31116908 -0.51801755 0.79676322 |
| 4867 | | Axis point 55.65316873 156.67493546 0.00000000 |
| 4868 | | Rotation angle (degrees) 120.88943344 |
| 4869 | | Shift along axis -13.41673124 |
| 4870 | | |
| 4871 | | |
| 4872 | | > ui mousemode right "translate selected models" |
| 4873 | | |
| 4874 | | > fitmap #4 inMap #1 |
| 4875 | | |
| 4876 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4877 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4878 | | average map value = 0.08059, steps = 40 |
| 4879 | | shifted from previous position = 0.0163 |
| 4880 | | rotated from previous position = 0.0411 degrees |
| 4881 | | atoms outside contour = 1617, contour level = 0.062298 |
| 4882 | | |
| 4883 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4884 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4885 | | Matrix rotation and translation |
| 4886 | | -0.36663105 -0.44032154 -0.81957221 149.14443277 |
| 4887 | | 0.92779283 -0.10756103 -0.35725494 128.80134527 |
| 4888 | | 0.06915301 -0.89137398 0.44796238 125.16582122 |
| 4889 | | Axis -0.31114215 -0.51771208 0.79697225 |
| 4890 | | Axis point 55.62363602 156.65562806 0.00000000 |
| 4891 | | Rotation angle (degrees) 120.87153211 |
| 4892 | | Shift along axis -13.33344689 |
| 4893 | | |
| 4894 | | |
| 4895 | | > view matrix models |
| 4896 | | > #4,-0.36663,-0.44032,-0.81957,131.01,0.92779,-0.10756,-0.35725,116.42,0.069153,-0.89137,0.44796,211.77 |
| 4897 | | |
| 4898 | | > fitmap #4 inMap #1 |
| 4899 | | |
| 4900 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4901 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4902 | | average map value = 0.07766, steps = 80 |
| 4903 | | shifted from previous position = 1.79 |
| 4904 | | rotated from previous position = 8.02 degrees |
| 4905 | | atoms outside contour = 1734, contour level = 0.062298 |
| 4906 | | |
| 4907 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4908 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4909 | | Matrix rotation and translation |
| 4910 | | -0.38002912 -0.47738227 -0.79226513 150.11524455 |
| 4911 | | 0.90178247 -0.00061736 -0.43218976 133.43116672 |
| 4912 | | 0.20583061 -0.87869551 0.43072958 129.45844249 |
| 4913 | | Axis -0.25369408 -0.56709456 0.78360901 |
| 4914 | | Axis point 47.87402498 169.51944286 0.00000000 |
| 4915 | | Rotation angle (degrees) 118.35664484 |
| 4916 | | Shift along axis -12.30663503 |
| 4917 | | |
| 4918 | | |
| 4919 | | > view matrix models |
| 4920 | | > #4,-0.38003,-0.47738,-0.79227,132.72,0.90178,-0.00061736,-0.43219,114.08,0.20583,-0.8787,0.43073,206.24 |
| 4921 | | |
| 4922 | | > fitmap #4 inMap #1 |
| 4923 | | |
| 4924 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4925 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4926 | | average map value = 0.08839, steps = 84 |
| 4927 | | shifted from previous position = 1.94 |
| 4928 | | rotated from previous position = 8.33 degrees |
| 4929 | | atoms outside contour = 1548, contour level = 0.062298 |
| 4930 | | |
| 4931 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4932 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4933 | | Matrix rotation and translation |
| 4934 | | -0.38008233 -0.41451661 -0.82686964 149.98228682 |
| 4935 | | 0.87761582 0.12070498 -0.46391894 132.85770868 |
| 4936 | | 0.29210939 -0.90200127 0.31790850 126.70118259 |
| 4937 | | Axis -0.24826860 -0.63414416 0.73227309 |
| 4938 | | Axis point 49.50668198 179.80450089 0.00000000 |
| 4939 | | Rotation angle (degrees) 118.08197991 |
| 4940 | | Shift along axis -28.70696561 |
| 4941 | | |
| 4942 | | |
| 4943 | | > ui mousemode right "move picked models" |
| 4944 | | |
| 4945 | | > view matrix models #1,1,0,0,-17.998,0,1,0,-17.417,0,0,1,82.516 |
| 4946 | | |
| 4947 | | > fitmap #4 inMap #1 |
| 4948 | | |
| 4949 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4950 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4951 | | average map value = 0.08839, steps = 56 |
| 4952 | | shifted from previous position = 1.68 |
| 4953 | | rotated from previous position = 0.00886 degrees |
| 4954 | | atoms outside contour = 1546, contour level = 0.062298 |
| 4955 | | |
| 4956 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4957 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4958 | | Matrix rotation and translation |
| 4959 | | -0.38019266 -0.41458376 -0.82678525 149.98607251 |
| 4960 | | 0.87756403 0.12063605 -0.46403483 132.85691875 |
| 4961 | | 0.29212141 -0.90197963 0.31795886 126.70216565 |
| 4962 | | Axis -0.24820033 -0.63412787 0.73231035 |
| 4963 | | Axis point 49.50363233 179.79663127 0.00000000 |
| 4964 | | Rotation angle (degrees) 118.08616586 |
| 4965 | | Shift along axis -28.68956005 |
| 4966 | | |
| 4967 | | |
| 4968 | | > ui mousemode right "rotate selected models" |
| 4969 | | |
| 4970 | | > view matrix models |
| 4971 | | > #4,-0.45421,-0.69234,-0.56068,132.23,0.78504,-0.01349,-0.6193,116.5,0.4212,-0.72145,0.54964,207.72 |
| 4972 | | |
| 4973 | | > fitmap #4 inMap #1 |
| 4974 | | |
| 4975 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 4976 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 4977 | | average map value = 0.08644, steps = 204 |
| 4978 | | shifted from previous position = 1.58 |
| 4979 | | rotated from previous position = 18.8 degrees |
| 4980 | | atoms outside contour = 1592, contour level = 0.062298 |
| 4981 | | |
| 4982 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 4983 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 4984 | | Matrix rotation and translation |
| 4985 | | -0.68583351 -0.46224676 -0.56210349 150.96068214 |
| 4986 | | 0.67165269 -0.10464959 -0.73343788 133.31449808 |
| 4987 | | 0.28020538 -0.88055460 0.38224148 126.77833123 |
| 4988 | | Axis -0.10359162 -0.59310827 0.79843056 |
| 4989 | | Axis point 47.90931269 153.31315511 0.00000000 |
| 4990 | | Rotation angle (degrees) 134.75855964 |
| 4991 | | Shift along axis 6.51550057 |
| 4992 | | |
| 4993 | | |
| 4994 | | > view matrix models |
| 4995 | | > #4,-0.57443,-0.38324,-0.7233,132.88,0.78663,-0.014077,-0.61727,115.01,0.22638,-0.92354,0.30955,209.76 |
| 4996 | | |
| 4997 | | > fitmap #4 inMap #1 |
| 4998 | | |
| 4999 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5000 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5001 | | average map value = 0.08811, steps = 68 |
| 5002 | | shifted from previous position = 1.16 |
| 5003 | | rotated from previous position = 7.64 degrees |
| 5004 | | atoms outside contour = 1532, contour level = 0.062298 |
| 5005 | | |
| 5006 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5007 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5008 | | Matrix rotation and translation |
| 5009 | | -0.47204953 -0.36762716 -0.80126120 151.57618068 |
| 5010 | | 0.84696847 0.06302576 -0.52789409 132.76566428 |
| 5011 | | 0.24456830 -0.92783513 0.28161733 127.04499149 |
| 5012 | | Axis -0.24210168 -0.63308602 0.73524749 |
| 5013 | | Axis point 55.23107263 173.14930065 0.00000000 |
| 5014 | | Rotation angle (degrees) 124.31228890 |
| 5015 | | Shift along axis -27.33942364 |
| 5016 | | |
| 5017 | | |
| 5018 | | > view matrix models |
| 5019 | | > #4,-0.16813,-0.29633,-0.94017,132.92,0.94592,0.21993,-0.23848,113.84,0.27744,-0.92942,0.24333,209.58 |
| 5020 | | |
| 5021 | | > fitmap #4 inMap #1 |
| 5022 | | |
| 5023 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5024 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5025 | | average map value = 0.08615, steps = 88 |
| 5026 | | shifted from previous position = 1.4 |
| 5027 | | rotated from previous position = 8.69 degrees |
| 5028 | | atoms outside contour = 1571, contour level = 0.062298 |
| 5029 | | |
| 5030 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5031 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5032 | | Matrix rotation and translation |
| 5033 | | -0.17610116 -0.43289418 -0.88407636 152.38297277 |
| 5034 | | 0.92661443 0.23021366 -0.29730015 131.97219652 |
| 5035 | | 0.33222596 -0.87155281 0.36058510 126.48551187 |
| 5036 | | Axis -0.30027248 -0.63599551 0.71087702 |
| 5037 | | Axis point 47.40191095 195.63752085 0.00000000 |
| 5038 | | Rotation angle (degrees) 107.01674646 |
| 5039 | | Shift along axis -39.77449400 |
| 5040 | | |
| 5041 | | |
| 5042 | | > view matrix models |
| 5043 | | > #4,-0.38041,-0.50945,-0.77185,134.85,0.87002,0.085887,-0.48548,115.63,0.31362,-0.8562,0.41056,208.87 |
| 5044 | | |
| 5045 | | > fitmap #4 inMap #1 |
| 5046 | | |
| 5047 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5048 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5049 | | average map value = 0.08811, steps = 76 |
| 5050 | | shifted from previous position = 1.32 |
| 5051 | | rotated from previous position = 9.81 degrees |
| 5052 | | atoms outside contour = 1536, contour level = 0.062298 |
| 5053 | | |
| 5054 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5055 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5056 | | Matrix rotation and translation |
| 5057 | | -0.47239565 -0.36818003 -0.80080323 151.58220356 |
| 5058 | | 0.84677347 0.06253541 -0.52826509 132.76206364 |
| 5059 | | 0.24457522 -0.92764906 0.28222363 127.05263443 |
| 5060 | | Axis -0.24178746 -0.63287317 0.73553408 |
| 5061 | | Axis point 55.19543045 173.09757911 0.00000000 |
| 5062 | | Rotation angle (degrees) 124.32027245 |
| 5063 | | Shift along axis -27.22068078 |
| 5064 | | |
| 5065 | | |
| 5066 | | > ui mousemode right "translate selected models" |
| 5067 | | |
| 5068 | | > ui mousemode right "rotate selected models" |
| 5069 | | |
| 5070 | | > fitmap #4 inMap #1 |
| 5071 | | |
| 5072 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5073 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5074 | | average map value = 0.08811, steps = 44 |
| 5075 | | shifted from previous position = 0.00291 |
| 5076 | | rotated from previous position = 0.00884 degrees |
| 5077 | | atoms outside contour = 1535, contour level = 0.062298 |
| 5078 | | |
| 5079 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5080 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5081 | | Matrix rotation and translation |
| 5082 | | -0.47244743 -0.36809159 -0.80081334 151.58486007 |
| 5083 | | 0.84672978 0.06262991 -0.52832393 132.76264404 |
| 5084 | | 0.24462646 -0.92767779 0.28208477 127.05198730 |
| 5085 | | Axis -0.24177884 -0.63293546 0.73548331 |
| 5086 | | Axis point 55.20119508 173.10641432 0.00000000 |
| 5087 | | Rotation angle (degrees) 124.32360726 |
| 5088 | | Shift along axis -27.23558049 |
| 5089 | | |
| 5090 | | |
| 5091 | | > view matrix models |
| 5092 | | > #4,-0.48867,-0.23005,-0.84159,133.36,0.78241,0.31127,-0.53939,114.87,0.38605,-0.92206,0.02789,209.87 |
| 5093 | | |
| 5094 | | > fitmap #4 inMap #1 |
| 5095 | | |
| 5096 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5097 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5098 | | average map value = 0.08135, steps = 64 |
| 5099 | | shifted from previous position = 1.78 |
| 5100 | | rotated from previous position = 8.78 degrees |
| 5101 | | atoms outside contour = 1614, contour level = 0.062298 |
| 5102 | | |
| 5103 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5104 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5105 | | Matrix rotation and translation |
| 5106 | | -0.58991801 -0.22830991 -0.77451361 152.99195175 |
| 5107 | | 0.68302497 0.37049946 -0.62944979 132.58308492 |
| 5108 | | 0.43066650 -0.90033590 -0.06262293 128.25448632 |
| 5109 | | Axis -0.17646762 -0.78510952 0.59368529 |
| 5110 | | Axis point 13.67663284 0.00000000 156.93818645 |
| 5111 | | Rotation angle (degrees) 129.86797582 |
| 5112 | | Shift along axis -54.94756639 |
| 5113 | | |
| 5114 | | |
| 5115 | | > view matrix models |
| 5116 | | > #4,-0.58676,-0.40679,-0.70017,135.27,0.80651,-0.21615,-0.55029,116.23,0.072515,-0.88758,0.45491,210.29 |
| 5117 | | |
| 5118 | | > fitmap #4 inMap #1 |
| 5119 | | |
| 5120 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5121 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5122 | | average map value = 0.07999, steps = 64 |
| 5123 | | shifted from previous position = 1.34 |
| 5124 | | rotated from previous position = 6.95 degrees |
| 5125 | | atoms outside contour = 1658, contour level = 0.062298 |
| 5126 | | |
| 5127 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5128 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5129 | | Matrix rotation and translation |
| 5130 | | -0.54281216 -0.32989888 -0.77234817 153.94439034 |
| 5131 | | 0.83967919 -0.23194441 -0.49106075 133.88656518 |
| 5132 | | -0.01714145 -0.91507842 0.40291147 127.12344959 |
| 5133 | | Axis -0.29135118 -0.51891791 0.80364090 |
| 5134 | | Axis point 65.75740777 148.37383972 0.00000000 |
| 5135 | | Rotation angle (degrees) 133.30820358 |
| 5136 | | Shift along axis -12.16641274 |
| 5137 | | |
| 5138 | | |
| 5139 | | > view matrix models |
| 5140 | | > #4,-0.56463,-0.2648,-0.78172,135.85,0.11456,-0.96311,0.2435,118.47,-0.81736,0.047931,0.57413,208.71 |
| 5141 | | |
| 5142 | | > view matrix models |
| 5143 | | > #4,-0.18576,-0.5249,-0.83064,135.66,-0.73096,-0.49112,0.47382,118.87,-0.65665,0.69518,-0.29245,208.88 |
| 5144 | | |
| 5145 | | > fitmap #4 inMap #1 |
| 5146 | | |
| 5147 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5148 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5149 | | average map value = 0.07389, steps = 124 |
| 5150 | | shifted from previous position = 2.83 |
| 5151 | | rotated from previous position = 7.94 degrees |
| 5152 | | atoms outside contour = 1798, contour level = 0.062298 |
| 5153 | | |
| 5154 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5155 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5156 | | Matrix rotation and translation |
| 5157 | | -0.16959417 -0.54924216 -0.81827310 152.59893707 |
| 5158 | | -0.63424927 -0.57467146 0.51718525 138.73910164 |
| 5159 | | -0.75429814 0.60670071 -0.25089551 127.19740783 |
| 5160 | | Axis 0.64381257 -0.46012027 -0.61138753 |
| 5161 | | Axis point 0.00000000 121.17787391 139.26605519 |
| 5162 | | Rotation angle (degrees) 176.01359231 |
| 5163 | | Shift along axis -43.35846875 |
| 5164 | | |
| 5165 | | |
| 5166 | | > view matrix models |
| 5167 | | > #4,-0.7803,-0.53522,-0.32354,134.88,0.59866,-0.78889,-0.13879,120.32,-0.18095,-0.30199,0.93598,207.35 |
| 5168 | | |
| 5169 | | > fitmap #4 inMap #1 |
| 5170 | | |
| 5171 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5172 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5173 | | average map value = 0.07461, steps = 112 |
| 5174 | | shifted from previous position = 4.98 |
| 5175 | | rotated from previous position = 6.62 degrees |
| 5176 | | atoms outside contour = 1778, contour level = 0.062298 |
| 5177 | | |
| 5178 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5179 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5180 | | Matrix rotation and translation |
| 5181 | | -0.70665306 -0.59999736 -0.37502616 152.43284211 |
| 5182 | | 0.66763814 -0.74093730 -0.07260324 136.11965129 |
| 5183 | | -0.23430911 -0.30168707 0.92416673 120.18232427 |
| 5184 | | Axis -0.17678514 -0.10859205 0.97824066 |
| 5185 | | Axis point 59.94030134 105.90471682 0.00000000 |
| 5186 | | Rotation angle (degrees) 139.61534095 |
| 5187 | | Shift along axis 75.83786340 |
| 5188 | | |
| 5189 | | |
| 5190 | | > view matrix models |
| 5191 | | > #4,-0.55752,-0.37251,-0.74189,134.41,0.37271,-0.91086,0.17727,119.3,-0.74179,-0.17768,0.64666,204.53 |
| 5192 | | |
| 5193 | | > fitmap #4 inMap #1 |
| 5194 | | |
| 5195 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5196 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5197 | | average map value = 0.08186, steps = 104 |
| 5198 | | shifted from previous position = 5 |
| 5199 | | rotated from previous position = 11.4 degrees |
| 5200 | | atoms outside contour = 1597, contour level = 0.062298 |
| 5201 | | |
| 5202 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5203 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5204 | | Matrix rotation and translation |
| 5205 | | -0.67685327 -0.36325408 -0.64024692 150.20058390 |
| 5206 | | 0.26891768 -0.93166517 0.24430163 132.89172198 |
| 5207 | | -0.68523932 -0.00681736 0.72828606 119.23853663 |
| 5208 | | Axis -0.36836722 0.06599949 0.92733471 |
| 5209 | | Axis point 86.59475929 78.66454919 0.00000000 |
| 5210 | | Rotation angle (degrees) 160.07107809 |
| 5211 | | Shift along axis 64.01584824 |
| 5212 | | |
| 5213 | | |
| 5214 | | > select subtract #4 |
| 5215 | | |
| 5216 | | 3 models selected |
| 5217 | | |
| 5218 | | > select add #4 |
| 5219 | | |
| 5220 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 5221 | | |
| 5222 | | > view matrix models |
| 5223 | | > #4,-0.84051,-0.1087,-0.53078,131.65,-0.16297,-0.88357,0.43902,116,-0.5167,0.4555,0.72494,200.02 |
| 5224 | | |
| 5225 | | > fitmap #4 inMap #1 |
| 5226 | | |
| 5227 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5228 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5229 | | average map value = 0.07662, steps = 96 |
| 5230 | | shifted from previous position = 2.21 |
| 5231 | | rotated from previous position = 11.3 degrees |
| 5232 | | atoms outside contour = 1801, contour level = 0.062298 |
| 5233 | | |
| 5234 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5235 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5236 | | Matrix rotation and translation |
| 5237 | | -0.87971247 0.04607954 -0.47326804 149.71217451 |
| 5238 | | -0.21275704 -0.92825192 0.30509477 135.22876296 |
| 5239 | | -0.42525334 0.36908679 0.82639853 118.98331291 |
| 5240 | | Axis 0.23620404 -0.17722940 -0.95540431 |
| 5241 | | Axis point 93.73411607 50.38706670 0.00000000 |
| 5242 | | Rotation angle (degrees) 172.21482673 |
| 5243 | | Shift along axis -102.28106243 |
| 5244 | | |
| 5245 | | |
| 5246 | | > view matrix models |
| 5247 | | > #4,-0.54308,-0.38008,-0.74873,132.73,0.40213,-0.90051,0.16545,116.42,-0.73713,-0.21123,0.64189,204.48 |
| 5248 | | |
| 5249 | | > fitmap #4 inMap #1 |
| 5250 | | |
| 5251 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5252 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5253 | | average map value = 0.08163, steps = 100 |
| 5254 | | shifted from previous position = 5.42 |
| 5255 | | rotated from previous position = 13.7 degrees |
| 5256 | | atoms outside contour = 1595, contour level = 0.062298 |
| 5257 | | |
| 5258 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5259 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5260 | | Matrix rotation and translation |
| 5261 | | -0.42833202 -0.52875217 -0.73277065 146.05327318 |
| 5262 | | 0.37497042 -0.84181726 0.38825364 131.86066451 |
| 5263 | | -0.82214893 -0.10846585 0.55884371 119.84457523 |
| 5264 | | Axis -0.47987557 0.08634744 0.87307706 |
| 5265 | | Axis point 85.53417498 86.85299280 0.00000000 |
| 5266 | | Rotation angle (degrees) 148.83192641 |
| 5267 | | Shift along axis 45.93198277 |
| 5268 | | |
| 5269 | | |
| 5270 | | > view matrix models |
| 5271 | | > #4,-0.057106,-0.55058,-0.83282,127.36,0.76724,-0.55796,0.31626,112.77,-0.63881,-0.62092,0.4543,203.56 |
| 5272 | | |
| 5273 | | > fitmap #4 inMap #1 |
| 5274 | | |
| 5275 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5276 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5277 | | average map value = 0.07805, steps = 80 |
| 5278 | | shifted from previous position = 3.64 |
| 5279 | | rotated from previous position = 4.65 degrees |
| 5280 | | atoms outside contour = 1631, contour level = 0.062298 |
| 5281 | | |
| 5282 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5283 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5284 | | Matrix rotation and translation |
| 5285 | | -0.11429484 -0.51810133 -0.84764834 143.57534459 |
| 5286 | | 0.73185868 -0.62090188 0.28082686 128.02888338 |
| 5287 | | -0.67180322 -0.58826173 0.45014284 123.01016231 |
| 5288 | | Axis -0.56709543 -0.11474200 0.81562065 |
| 5289 | | Axis point 77.79863296 114.41193309 0.00000000 |
| 5290 | | Rotation angle (degrees) 129.98050643 |
| 5291 | | Shift along axis 4.21841774 |
| 5292 | | |
| 5293 | | |
| 5294 | | > view matrix models |
| 5295 | | > #4,-0.8891,-0.10298,-0.44598,125.46,-0.024035,-0.96252,0.27016,113.68,-0.45709,0.25092,0.85329,201.49 |
| 5296 | | |
| 5297 | | > fitmap #4 inMap #1 |
| 5298 | | |
| 5299 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5300 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5301 | | average map value = 0.07939, steps = 72 |
| 5302 | | shifted from previous position = 2.24 |
| 5303 | | rotated from previous position = 9.54 degrees |
| 5304 | | atoms outside contour = 1668, contour level = 0.062298 |
| 5305 | | |
| 5306 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5307 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5308 | | Matrix rotation and translation |
| 5309 | | -0.86700704 -0.26175222 -0.42401010 141.81514986 |
| 5310 | | 0.09718026 -0.92340232 0.37132757 129.52357829 |
| 5311 | | -0.48872772 0.28073821 0.82603346 118.39502820 |
| 5312 | | Axis -0.24105594 0.17221191 0.95510999 |
| 5313 | | Axis point 80.28541527 62.33632000 0.00000000 |
| 5314 | | Rotation angle (degrees) 169.16967880 |
| 5315 | | Shift along axis 101.20039307 |
| 5316 | | |
| 5317 | | |
| 5318 | | > view matrix models |
| 5319 | | > #4,-0.40892,-0.3367,-0.84819,123.93,0.2046,-0.93961,0.27436,112.12,-0.88934,-0.061346,0.45311,204 |
| 5320 | | |
| 5321 | | > fitmap #4 inMap #1 |
| 5322 | | |
| 5323 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5324 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5325 | | average map value = 0.08342, steps = 76 |
| 5326 | | shifted from previous position = 1.33 |
| 5327 | | rotated from previous position = 8.09 degrees |
| 5328 | | atoms outside contour = 1526, contour level = 0.062298 |
| 5329 | | |
| 5330 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5331 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5332 | | Matrix rotation and translation |
| 5333 | | -0.36616664 -0.39151101 -0.84418074 142.68292479 |
| 5334 | | 0.11621750 -0.91932300 0.37595042 128.43639721 |
| 5335 | | -0.92326349 0.03955193 0.38212585 121.90255697 |
| 5336 | | Axis -0.54772755 0.12876337 0.82668889 |
| 5337 | | Axis point 99.98229173 70.34431160 0.00000000 |
| 5338 | | Rotation angle (degrees) 162.11631722 |
| 5339 | | Shift along axis 39.16202373 |
| 5340 | | |
| 5341 | | |
| 5342 | | > ui mousemode right translate |
| 5343 | | |
| 5344 | | > ui mousemode right "translate selected models" |
| 5345 | | |
| 5346 | | > view matrix models |
| 5347 | | > #4,-0.36617,-0.39151,-0.84418,124.62,0.11622,-0.91932,0.37595,83.146,-0.92326,0.039552,0.38213,195.74 |
| 5348 | | |
| 5349 | | > fitmap #4 inMap #1 |
| 5350 | | |
| 5351 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5352 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5353 | | average map value = 0.06775, steps = 188 |
| 5354 | | shifted from previous position = 18.1 |
| 5355 | | rotated from previous position = 24.9 degrees |
| 5356 | | atoms outside contour = 1856, contour level = 0.062298 |
| 5357 | | |
| 5358 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5359 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5360 | | Matrix rotation and translation |
| 5361 | | -0.30764692 -0.73367126 -0.60587115 138.90686586 |
| 5362 | | 0.16965734 -0.66884642 0.72378233 112.91141995 |
| 5363 | | -0.93625304 0.11987892 0.33024126 124.43463284 |
| 5364 | | Axis -0.53173738 0.29090148 0.79538147 |
| 5365 | | Axis point 92.24051376 66.93299313 0.00000000 |
| 5366 | | Rotation angle (degrees) 145.39895797 |
| 5367 | | Shift along axis 57.95712828 |
| 5368 | | |
| 5369 | | |
| 5370 | | > view matrix models |
| 5371 | | > #4,-0.30765,-0.73367,-0.60587,124.81,0.16966,-0.66885,0.72378,52.954,-0.93625,0.11988,0.33024,196.59 |
| 5372 | | |
| 5373 | | > fitmap #4 inMap #1 |
| 5374 | | |
| 5375 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5376 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5377 | | average map value = 0.05195, steps = 220 |
| 5378 | | shifted from previous position = 19.4 |
| 5379 | | rotated from previous position = 33.6 degrees |
| 5380 | | atoms outside contour = 2117, contour level = 0.062298 |
| 5381 | | |
| 5382 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5383 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5384 | | Matrix rotation and translation |
| 5385 | | 0.12743349 -0.67608781 -0.72571756 130.54716315 |
| 5386 | | 0.50636231 -0.58480075 0.63372336 80.76933181 |
| 5387 | | -0.85285281 -0.44823360 0.26782219 126.18237862 |
| 5388 | | Axis -0.67294749 0.07907463 0.73545148 |
| 5389 | | Axis point 95.63025807 80.95431923 0.00000000 |
| 5390 | | Rotation angle (degrees) 126.49641847 |
| 5391 | | Shift along axis 11.33643563 |
| 5392 | | |
| 5393 | | |
| 5394 | | > view matrix models |
| 5395 | | > #4,0.12743,-0.67609,-0.72572,115.67,0.50636,-0.5848,0.63372,49.422,-0.85285,-0.44823,0.26782,206.64 |
| 5396 | | |
| 5397 | | > fitmap #4 inMap #1 |
| 5398 | | |
| 5399 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5400 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5401 | | average map value = 0.05031, steps = 152 |
| 5402 | | shifted from previous position = 9.27 |
| 5403 | | rotated from previous position = 8.89 degrees |
| 5404 | | atoms outside contour = 2205, contour level = 0.062298 |
| 5405 | | |
| 5406 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5407 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5408 | | Matrix rotation and translation |
| 5409 | | 0.21446370 -0.70041904 -0.68074848 129.31626110 |
| 5410 | | 0.38882939 -0.57813433 0.71733702 74.72407831 |
| 5411 | | -0.89600057 -0.41853777 0.14835468 127.16013177 |
| 5412 | | Axis -0.71510731 0.13551524 0.68575298 |
| 5413 | | Axis point 0.00000000 92.38810121 100.00074155 |
| 5414 | | Rotation angle (degrees) 127.42035131 |
| 5415 | | Shift along axis 4.85168670 |
| 5416 | | |
| 5417 | | |
| 5418 | | > ui mousemode right translate |
| 5419 | | |
| 5420 | | > ui mousemode right "translate selected models" |
| 5421 | | |
| 5422 | | > view matrix models |
| 5423 | | > #4,0.21446,-0.70042,-0.68075,109.5,0.38883,-0.57813,0.71734,52.535,-0.896,-0.41854,0.14835,206.89 |
| 5424 | | |
| 5425 | | > ui mousemode right "rotate selected models" |
| 5426 | | |
| 5427 | | > view matrix models |
| 5428 | | > #4,-0.69216,-0.54149,-0.47717,111.01,0.030805,-0.68271,0.73004,53.782,-0.72108,0.49061,0.48922,202.94 |
| 5429 | | |
| 5430 | | > view matrix models |
| 5431 | | > #4,-0.9626,-0.1638,-0.21582,109.99,-0.05656,-0.65754,0.7513,53.896,-0.26497,0.7354,0.62368,200.63 |
| 5432 | | |
| 5433 | | > fitmap #4 inMap #1 |
| 5434 | | |
| 5435 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5436 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5437 | | average map value = 0.05019, steps = 124 |
| 5438 | | shifted from previous position = 9.01 |
| 5439 | | rotated from previous position = 11.3 degrees |
| 5440 | | atoms outside contour = 2190, contour level = 0.062298 |
| 5441 | | |
| 5442 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5443 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5444 | | Matrix rotation and translation |
| 5445 | | -0.93094925 -0.33551759 -0.14408833 129.37661847 |
| 5446 | | 0.12040066 -0.65458693 0.74633748 78.29705152 |
| 5447 | | -0.34472769 0.67745398 0.64978375 123.39467521 |
| 5448 | | Axis -0.13698497 0.39900090 0.90666057 |
| 5449 | | Axis point 72.01850762 22.32303235 0.00000000 |
| 5450 | | Rotation angle (degrees) 165.43801771 |
| 5451 | | Shift along axis 125.39502884 |
| 5452 | | |
| 5453 | | |
| 5454 | | > view matrix models |
| 5455 | | > #4,-0.77273,0.62593,0.10536,107.58,-0.63131,-0.77511,-0.025298,65.437,0.065834,-0.086066,0.99411,205.94 |
| 5456 | | |
| 5457 | | > fitmap #4 inMap #1 |
| 5458 | | |
| 5459 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5460 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5461 | | average map value = 0.05262, steps = 128 |
| 5462 | | shifted from previous position = 8.04 |
| 5463 | | rotated from previous position = 15.4 degrees |
| 5464 | | atoms outside contour = 2049, contour level = 0.062298 |
| 5465 | | |
| 5466 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5467 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5468 | | Matrix rotation and translation |
| 5469 | | -0.64153320 0.76648487 -0.03059559 127.90300440 |
| 5470 | | -0.76422524 -0.63517742 0.11184556 89.81977924 |
| 5471 | | 0.06629430 0.09513456 0.99325449 125.26596186 |
| 5472 | | Axis -0.01089470 -0.06316718 -0.99794349 |
| 5473 | | Axis point 82.33789840 11.34570714 0.00000000 |
| 5474 | | Rotation angle (degrees) 129.92079810 |
| 5475 | | Shift along axis -132.07547863 |
| 5476 | | |
| 5477 | | |
| 5478 | | > ui mousemode right "move picked models" |
| 5479 | | |
| 5480 | | > view matrix models |
| 5481 | | > #4,-0.64153,0.76648,-0.030596,111.16,-0.76423,-0.63518,0.11185,59.428,0.066294,0.095135,0.99325,204.67 |
| 5482 | | |
| 5483 | | > fitmap #4 inMap #1 |
| 5484 | | |
| 5485 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5486 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5487 | | average map value = 0.05111, steps = 148 |
| 5488 | | shifted from previous position = 7.43 |
| 5489 | | rotated from previous position = 13.9 degrees |
| 5490 | | atoms outside contour = 2141, contour level = 0.062298 |
| 5491 | | |
| 5492 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5493 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5494 | | Matrix rotation and translation |
| 5495 | | -0.56742203 0.78770176 -0.23991284 129.44951177 |
| 5496 | | -0.81256627 -0.58280994 0.00828463 83.84783013 |
| 5497 | | -0.13329777 0.19964596 0.97075908 125.41221468 |
| 5498 | | Axis 0.11847594 -0.06600770 -0.99076053 |
| 5499 | | Axis point 91.78261393 1.08269426 0.00000000 |
| 5500 | | Rotation angle (degrees) 126.13830774 |
| 5501 | | Shift along axis -114.45142287 |
| 5502 | | |
| 5503 | | |
| 5504 | | > view matrix models #1,1,0,0,-18.423,0,1,0,-23.474,0,0,1,80.335 |
| 5505 | | |
| 5506 | | > fitmap #4 inMap #1 |
| 5507 | | |
| 5508 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5509 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5510 | | average map value = 0.05515, steps = 108 |
| 5511 | | shifted from previous position = 5.73 |
| 5512 | | rotated from previous position = 10.7 degrees |
| 5513 | | atoms outside contour = 2001, contour level = 0.062298 |
| 5514 | | |
| 5515 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5516 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5517 | | Matrix rotation and translation |
| 5518 | | -0.61165950 0.72456021 -0.31762424 128.19365619 |
| 5519 | | -0.73382275 -0.66963617 -0.11441842 93.66566503 |
| 5520 | | -0.29559571 0.16309478 0.94128809 124.03562903 |
| 5521 | | Axis 0.18691340 -0.01483687 -0.98226435 |
| 5522 | | Axis point 96.75907700 12.69071741 0.00000000 |
| 5523 | | Rotation angle (degrees) 132.06735742 |
| 5524 | | Shift along axis -99.26436883 |
| 5525 | | |
| 5526 | | |
| 5527 | | > ui mousemode right "rotate selected models" |
| 5528 | | |
| 5529 | | > view matrix models |
| 5530 | | > #4,-0.45974,0.58617,0.66712,107,-0.67736,-0.71727,0.16344,69.397,0.57431,-0.37674,0.7268,204.05 |
| 5531 | | |
| 5532 | | > fitmap #4 inMap #1 |
| 5533 | | |
| 5534 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5535 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5536 | | average map value = 0.05488, steps = 96 |
| 5537 | | shifted from previous position = 4.16 |
| 5538 | | rotated from previous position = 11 degrees |
| 5539 | | atoms outside contour = 2012, contour level = 0.062298 |
| 5540 | | |
| 5541 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5542 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5543 | | Matrix rotation and translation |
| 5544 | | -0.32387668 0.70069588 0.63571156 127.00553967 |
| 5545 | | -0.70932137 -0.62447991 0.32693735 91.88009848 |
| 5546 | | 0.62607275 -0.34503641 0.69927304 127.18622736 |
| 5547 | | Axis -0.43020561 0.00617088 -0.90270984 |
| 5548 | | Axis point 57.93937912 31.90228433 0.00000000 |
| 5549 | | Rotation angle (degrees) 128.64856290 |
| 5550 | | Shift along axis -168.88377313 |
| 5551 | | |
| 5552 | | |
| 5553 | | > view matrix models |
| 5554 | | > #4,-0.64618,0.50995,-0.56781,113.34,-0.62682,-0.77904,0.013676,69.475,-0.43537,0.36475,0.82305,208.15 |
| 5555 | | |
| 5556 | | > fitmap #4 inMap #1 |
| 5557 | | |
| 5558 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5559 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5560 | | average map value = 0.0543, steps = 84 |
| 5561 | | shifted from previous position = 3.8 |
| 5562 | | rotated from previous position = 12.5 degrees |
| 5563 | | atoms outside contour = 2024, contour level = 0.062298 |
| 5564 | | |
| 5565 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5566 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5567 | | Matrix rotation and translation |
| 5568 | | -0.72059480 0.56028340 -0.40844295 131.15273291 |
| 5569 | | -0.57958685 -0.81007064 -0.08868281 91.49635500 |
| 5570 | | -0.38055514 0.17282379 0.90846558 124.51281622 |
| 5571 | | Axis 0.22354522 -0.02383949 -0.97440198 |
| 5572 | | Axis point 94.64982755 19.00100466 0.00000000 |
| 5573 | | Rotation angle (degrees) 144.20353699 |
| 5574 | | Shift along axis -94.18819473 |
| 5575 | | |
| 5576 | | |
| 5577 | | > ui mousemode right "translate selected models" |
| 5578 | | |
| 5579 | | > view matrix models |
| 5580 | | > #4,-0.72059,0.56028,-0.40844,112.64,-0.57959,-0.81007,-0.088683,73.067,-0.38056,0.17282,0.90847,206.35 |
| 5581 | | |
| 5582 | | > fitmap #4 inMap #1 |
| 5583 | | |
| 5584 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5585 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5586 | | average map value = 0.05844, steps = 136 |
| 5587 | | shifted from previous position = 7.12 |
| 5588 | | rotated from previous position = 18.4 degrees |
| 5589 | | atoms outside contour = 1978, contour level = 0.062298 |
| 5590 | | |
| 5591 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5592 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5593 | | Matrix rotation and translation |
| 5594 | | -0.58609421 0.69389806 -0.41832890 130.53384903 |
| 5595 | | -0.57424511 -0.71997632 -0.38971355 102.68903501 |
| 5596 | | -0.57160838 0.01181447 0.82044152 122.68575161 |
| 5597 | | Axis 0.29987278 0.11447356 -0.94708612 |
| 5598 | | Axis point 107.03142596 28.31512325 0.00000000 |
| 5599 | | Rotation angle (degrees) 137.97172327 |
| 5600 | | Shift along axis -65.29524481 |
| 5601 | | |
| 5602 | | |
| 5603 | | > view matrix models |
| 5604 | | > #4,-0.58609,0.6939,-0.41833,113.93,-0.57425,-0.71998,-0.38971,79.084,-0.57161,0.011814,0.82044,202.6 |
| 5605 | | |
| 5606 | | > fitmap #4 inMap #1 |
| 5607 | | |
| 5608 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5609 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5610 | | average map value = 0.05839, steps = 108 |
| 5611 | | shifted from previous position = 1.53 |
| 5612 | | rotated from previous position = 4.48 degrees |
| 5613 | | atoms outside contour = 1975, contour level = 0.062298 |
| 5614 | | |
| 5615 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5616 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5617 | | Matrix rotation and translation |
| 5618 | | -0.54876901 0.68350195 -0.48132906 131.23611777 |
| 5619 | | -0.58341537 -0.72549909 -0.36507202 102.28477510 |
| 5620 | | -0.59873123 0.08047456 0.79689696 123.14460624 |
| 5621 | | Axis 0.33049957 0.08708712 -0.93977969 |
| 5622 | | Axis point 109.50861216 25.45422325 0.00000000 |
| 5623 | | Rotation angle (degrees) 137.61956636 |
| 5624 | | Shift along axis -63.44763399 |
| 5625 | | |
| 5626 | | |
| 5627 | | > ui mousemode right "move picked models" |
| 5628 | | |
| 5629 | | > view matrix models #1,1,0,0,-20.876,0,1,0,-23.227,0,0,1,82.175 |
| 5630 | | |
| 5631 | | > fitmap #4 inMap #1 |
| 5632 | | |
| 5633 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5634 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5635 | | average map value = 0.05839, steps = 132 |
| 5636 | | shifted from previous position = 3.08 |
| 5637 | | rotated from previous position = 0.00225 degrees |
| 5638 | | atoms outside contour = 1974, contour level = 0.062298 |
| 5639 | | |
| 5640 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5641 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5642 | | Matrix rotation and translation |
| 5643 | | -0.54876756 0.68350764 -0.48132262 131.23534380 |
| 5644 | | -0.58339649 -0.72549716 -0.36510602 102.28493362 |
| 5645 | | -0.59875095 0.08044359 0.79688527 123.14425687 |
| 5646 | | Axis 0.33050405 0.08710711 -0.93977626 |
| 5647 | | Axis point 109.50865181 25.45610495 0.00000000 |
| 5648 | | Rotation angle (degrees) 137.61991968 |
| 5649 | | Shift along axis -63.44449253 |
| 5650 | | |
| 5651 | | |
| 5652 | | > ui mousemode right "rotate selected models" |
| 5653 | | |
| 5654 | | > view matrix models |
| 5655 | | > #4,-0.73167,0.36006,-0.57881,112.03,-0.39278,-0.91667,-0.073726,78.252,-0.55712,0.1734,0.81212,204.9 |
| 5656 | | |
| 5657 | | > fitmap #4 inMap #1 |
| 5658 | | |
| 5659 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5660 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5661 | | average map value = 0.05941, steps = 92 |
| 5662 | | shifted from previous position = 2.24 |
| 5663 | | rotated from previous position = 5.55 degrees |
| 5664 | | atoms outside contour = 1964, contour level = 0.062298 |
| 5665 | | |
| 5666 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5667 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5668 | | Matrix rotation and translation |
| 5669 | | -0.71454367 0.33702569 -0.61305875 134.50640940 |
| 5670 | | -0.42954016 -0.90303796 0.00420549 102.99755817 |
| 5671 | | -0.55219797 0.26633836 0.79002612 122.75992768 |
| 5672 | | Axis 0.32265327 -0.07491213 -0.94354811 |
| 5673 | | Axis point 99.15224133 28.58783032 0.00000000 |
| 5674 | | Rotation angle (degrees) 156.03274377 |
| 5675 | | Shift along axis -80.14673145 |
| 5676 | | |
| 5677 | | |
| 5678 | | > view matrix models |
| 5679 | | > #4,-0.79066,-0.0789,-0.60715,114.98,0.19445,-0.97268,-0.12682,78.597,-0.58056,-0.21833,0.7844,206.37 |
| 5680 | | |
| 5681 | | > fitmap #4 inMap #1 |
| 5682 | | |
| 5683 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5684 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5685 | | average map value = 0.06814, steps = 148 |
| 5686 | | shifted from previous position = 8.33 |
| 5687 | | rotated from previous position = 19.8 degrees |
| 5688 | | atoms outside contour = 1796, contour level = 0.062298 |
| 5689 | | |
| 5690 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5691 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5692 | | Matrix rotation and translation |
| 5693 | | -0.88702550 -0.25712521 -0.38350017 137.20515090 |
| 5694 | | 0.35602215 -0.90976089 -0.21350256 109.71421877 |
| 5695 | | -0.29399657 -0.32591677 0.89852339 122.64215618 |
| 5696 | | Axis -0.17850329 -0.14212338 0.97362083 |
| 5697 | | Axis point 69.80765924 76.36603324 0.00000000 |
| 5698 | | Rotation angle (degrees) 161.64643309 |
| 5699 | | Shift along axis 79.32243269 |
| 5700 | | |
| 5701 | | |
| 5702 | | > view matrix models |
| 5703 | | > #4,-0.92946,-0.13943,-0.34156,116,0.029931,-0.95128,0.30688,86.064,-0.3677,0.27501,0.88835,203.38 |
| 5704 | | |
| 5705 | | > fitmap #4 inMap #1 |
| 5706 | | |
| 5707 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5708 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5709 | | average map value = 0.07985, steps = 216 |
| 5710 | | shifted from previous position = 15.4 |
| 5711 | | rotated from previous position = 30 degrees |
| 5712 | | atoms outside contour = 1640, contour level = 0.062298 |
| 5713 | | |
| 5714 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5715 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5716 | | Matrix rotation and translation |
| 5717 | | -0.78300256 -0.59998242 -0.16409778 136.29375818 |
| 5718 | | 0.50688350 -0.76837209 0.39073451 123.09779864 |
| 5719 | | -0.36052199 0.22276766 0.90575850 121.70235277 |
| 5720 | | Axis -0.14777506 0.17281148 0.97380631 |
| 5721 | | Axis point 60.98495723 75.39917350 0.00000000 |
| 5722 | | Rotation angle (degrees) 145.36688874 |
| 5723 | | Shift along axis 119.64641344 |
| 5724 | | |
| 5725 | | |
| 5726 | | > view matrix models |
| 5727 | | > #4,-0.86233,-0.43622,-0.25709,115.44,0.085083,-0.62536,0.77569,99.577,-0.49914,0.64703,0.57638,204 |
| 5728 | | |
| 5729 | | > fitmap #4 inMap #1 |
| 5730 | | |
| 5731 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5732 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5733 | | average map value = 0.07738, steps = 160 |
| 5734 | | shifted from previous position = 2.81 |
| 5735 | | rotated from previous position = 15.9 degrees |
| 5736 | | atoms outside contour = 1646, contour level = 0.062298 |
| 5737 | | |
| 5738 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5739 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5740 | | Matrix rotation and translation |
| 5741 | | -0.76941398 -0.38694279 -0.50821000 139.34638506 |
| 5742 | | -0.06390792 -0.74500566 0.66398971 123.88464134 |
| 5743 | | -0.63554536 0.54336161 0.54848907 122.35273046 |
| 5744 | | Axis -0.32816598 0.34641292 0.87880895 |
| 5745 | | Axis point 87.89771111 46.98780096 0.00000000 |
| 5746 | | Rotation angle (degrees) 169.40932960 |
| 5747 | | Shift along axis 104.71117209 |
| 5748 | | |
| 5749 | | |
| 5750 | | > view matrix models |
| 5751 | | > #4,-0.24652,0.28989,-0.92477,116.3,-0.90984,-0.39789,0.11781,103.55,-0.3338,0.87043,0.36184,203.3 |
| 5752 | | |
| 5753 | | > fitmap #4 inMap #1 |
| 5754 | | |
| 5755 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5756 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5757 | | average map value = 0.08421, steps = 80 |
| 5758 | | shifted from previous position = 3.48 |
| 5759 | | rotated from previous position = 13.1 degrees |
| 5760 | | atoms outside contour = 1629, contour level = 0.062298 |
| 5761 | | |
| 5762 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5763 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5764 | | Matrix rotation and translation |
| 5765 | | -0.32287446 0.29822630 -0.89822779 138.60247692 |
| 5766 | | -0.80197722 -0.59017626 0.09232834 128.63538030 |
| 5767 | | -0.50257798 0.75016868 0.42972354 124.36819790 |
| 5768 | | Axis 0.49036060 -0.29492122 -0.82010241 |
| 5769 | | Axis point 131.70364145 1.12411036 0.00000000 |
| 5770 | | Rotation angle (degrees) 137.87332159 |
| 5771 | | Shift along axis -71.96676837 |
| 5772 | | |
| 5773 | | |
| 5774 | | > view matrix models |
| 5775 | | > #4,-0.6444,0.24018,-0.72599,118.3,-0.74441,0.020181,0.66742,101.96,0.17495,0.97052,0.16579,204.79 |
| 5776 | | |
| 5777 | | > fitmap #4 inMap #1 |
| 5778 | | |
| 5779 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5780 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5781 | | average map value = 0.08473, steps = 100 |
| 5782 | | shifted from previous position = 3.87 |
| 5783 | | rotated from previous position = 15.6 degrees |
| 5784 | | atoms outside contour = 1527, contour level = 0.062298 |
| 5785 | | |
| 5786 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5787 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5788 | | Matrix rotation and translation |
| 5789 | | -0.65519802 -0.01730140 -0.75525904 139.33911969 |
| 5790 | | -0.75352320 -0.05652296 0.65498698 126.86810130 |
| 5791 | | -0.05402167 0.99825138 0.02399672 119.78801021 |
| 5792 | | Axis 0.31987509 -0.65345654 -0.68605720 |
| 5793 | | Axis point 107.80008814 -31.34038933 0.00000000 |
| 5794 | | Rotation angle (degrees) 147.55022659 |
| 5795 | | Shift along axis -120.51310315 |
| 5796 | | |
| 5797 | | |
| 5798 | | > view matrix models |
| 5799 | | > #4,-0.87124,0.19133,-0.45204,117.64,-0.16184,0.75745,0.63252,99.807,0.46341,0.62423,-0.62895,203.38 |
| 5800 | | |
| 5801 | | > fitmap #4 inMap #1 |
| 5802 | | |
| 5803 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5804 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5805 | | average map value = 0.08166, steps = 124 |
| 5806 | | shifted from previous position = 6.68 |
| 5807 | | rotated from previous position = 13 degrees |
| 5808 | | atoms outside contour = 1621, contour level = 0.062298 |
| 5809 | | |
| 5810 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5811 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5812 | | Matrix rotation and translation |
| 5813 | | -0.95888267 0.11162750 -0.26092783 132.44910591 |
| 5814 | | -0.10086386 0.72533299 0.68096882 125.69433193 |
| 5815 | | 0.26527441 0.67928739 -0.68425005 122.26327218 |
| 5816 | | Axis -0.00296293 -0.92724596 -0.37444112 |
| 5817 | | Axis point 61.23316229 0.00000000 46.06020748 |
| 5818 | | Rotation angle (degrees) 163.51617280 |
| 5819 | | Shift along axis -162.72239593 |
| 5820 | | |
| 5821 | | |
| 5822 | | > view matrix models |
| 5823 | | > #4,-0.89072,-0.038431,-0.45293,112.33,-0.42259,0.43706,0.79398,103.85,0.16744,0.89861,-0.40554,203.33 |
| 5824 | | |
| 5825 | | > fitmap #4 inMap #1 |
| 5826 | | |
| 5827 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5828 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5829 | | average map value = 0.08323, steps = 224 |
| 5830 | | shifted from previous position = 7.33 |
| 5831 | | rotated from previous position = 24.5 degrees |
| 5832 | | atoms outside contour = 1563, contour level = 0.062298 |
| 5833 | | |
| 5834 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5835 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5836 | | Matrix rotation and translation |
| 5837 | | -0.72259578 -0.40245193 -0.56203895 139.76401488 |
| 5838 | | -0.68266144 0.28752964 0.67178871 123.88005897 |
| 5839 | | -0.10875981 0.86911400 -0.48250612 122.30124139 |
| 5840 | | Axis 0.34724625 -0.79766500 -0.49310303 |
| 5841 | | Axis point 90.68442090 0.00000000 39.05985133 |
| 5842 | | Rotation angle (degrees) 163.49322243 |
| 5843 | | Shift along axis -110.58936895 |
| 5844 | | |
| 5845 | | |
| 5846 | | > view matrix models |
| 5847 | | > #4,-0.86423,-0.30285,-0.40173,118.56,-0.49343,0.66599,0.55945,99.391,0.098117,0.68172,-0.72501,205.09 |
| 5848 | | |
| 5849 | | > fitmap #4 inMap #1 |
| 5850 | | |
| 5851 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5852 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5853 | | average map value = 0.078, steps = 136 |
| 5854 | | shifted from previous position = 4.75 |
| 5855 | | rotated from previous position = 12.4 degrees |
| 5856 | | atoms outside contour = 1663, contour level = 0.062298 |
| 5857 | | |
| 5858 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5859 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5860 | | Matrix rotation and translation |
| 5861 | | -0.90652613 -0.09289267 -0.41180253 135.80579758 |
| 5862 | | -0.36047986 0.67799457 0.64060724 125.56184840 |
| 5863 | | 0.21969216 0.72917372 -0.64810573 122.35105165 |
| 5864 | | Axis 0.12807072 -0.91316693 -0.38694192 |
| 5865 | | Axis point 70.22263820 0.00000000 49.64678887 |
| 5866 | | Rotation angle (degrees) 159.77108543 |
| 5867 | | Shift along axis -144.60893149 |
| 5868 | | |
| 5869 | | |
| 5870 | | > view matrix models |
| 5871 | | > #4,-0.60244,-0.63326,-0.48584,115.79,-0.79733,0.50521,0.33018,104.89,0.036362,0.5863,-0.80928,205.88 |
| 5872 | | |
| 5873 | | > fitmap #4 inMap #1 |
| 5874 | | |
| 5875 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5876 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5877 | | average map value = 0.08261, steps = 104 |
| 5878 | | shifted from previous position = 1.92 |
| 5879 | | rotated from previous position = 6.6 degrees |
| 5880 | | atoms outside contour = 1606, contour level = 0.062298 |
| 5881 | | |
| 5882 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5883 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5884 | | Matrix rotation and translation |
| 5885 | | -0.55557410 -0.66857103 -0.49431791 135.41396998 |
| 5886 | | -0.82978871 0.40807283 0.38069314 127.14012209 |
| 5887 | | -0.05280270 0.62168267 -0.78148739 122.84937406 |
| 5888 | | Axis 0.45624058 -0.83587514 -0.30521677 |
| 5889 | | Axis point 94.53813969 0.00000000 52.11011474 |
| 5890 | | Rotation angle (degrees) 164.68630659 |
| 5891 | | Shift along axis -81.98760891 |
| 5892 | | |
| 5893 | | |
| 5894 | | > view matrix models |
| 5895 | | > #4,-0.15843,-0.98734,-0.0074431,112.97,-0.85546,0.1335,0.50037,104.41,-0.49305,0.085643,-0.86578,207.96 |
| 5896 | | |
| 5897 | | > fitmap #4 inMap #1 |
| 5898 | | |
| 5899 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5900 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5901 | | average map value = 0.08152, steps = 100 |
| 5902 | | shifted from previous position = 1.63 |
| 5903 | | rotated from previous position = 4.42 degrees |
| 5904 | | atoms outside contour = 1619, contour level = 0.062298 |
| 5905 | | |
| 5906 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5907 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5908 | | Matrix rotation and translation |
| 5909 | | -0.13379071 -0.99005367 -0.04351763 134.58712560 |
| 5910 | | -0.89062137 0.10086356 0.44341867 128.03022664 |
| 5911 | | -0.43461894 0.09808303 -0.89525756 127.16444837 |
| 5912 | | Axis -0.65018507 0.73635097 0.18720742 |
| 5913 | | Axis point 134.96745261 0.00000000 33.12542591 |
| 5914 | | Rotation angle (degrees) 164.59934241 |
| 5915 | | Shift along axis 30.57476975 |
| 5916 | | |
| 5917 | | |
| 5918 | | > view matrix models |
| 5919 | | > #4,0.39695,-0.87756,0.26891,111.06,-0.76432,-0.15384,0.62621,104.65,-0.50817,-0.45411,-0.73181,210.62 |
| 5920 | | |
| 5921 | | > fitmap #4 inMap #1 |
| 5922 | | |
| 5923 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5924 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5925 | | average map value = 0.08083, steps = 84 |
| 5926 | | shifted from previous position = 2.8 |
| 5927 | | rotated from previous position = 2.46 degrees |
| 5928 | | atoms outside contour = 1600, contour level = 0.062298 |
| 5929 | | |
| 5930 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5931 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5932 | | Matrix rotation and translation |
| 5933 | | 0.40155854 -0.88070824 0.25120455 129.68159299 |
| 5934 | | -0.77795390 -0.18328610 0.60099412 128.65372074 |
| 5935 | | -0.48325818 -0.43675988 -0.75875051 126.92750673 |
| 5936 | | Axis -0.81359888 0.57581859 0.08055938 |
| 5937 | | Axis point 0.00000000 138.69764395 38.69678559 |
| 5938 | | Rotation angle (degrees) 140.37535866 |
| 5939 | | Shift along axis -21.20239307 |
| 5940 | | |
| 5941 | | |
| 5942 | | > ui mousemode right "translate selected models" |
| 5943 | | |
| 5944 | | > view matrix models |
| 5945 | | > #4,0.40156,-0.88071,0.2512,111.31,-0.77795,-0.18329,0.60099,104.55,-0.48326,-0.43676,-0.75875,204.73 |
| 5946 | | |
| 5947 | | > fitmap #4 inMap #1 |
| 5948 | | |
| 5949 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5950 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5951 | | average map value = 0.08314, steps = 144 |
| 5952 | | shifted from previous position = 3.22 |
| 5953 | | rotated from previous position = 13.4 degrees |
| 5954 | | atoms outside contour = 1539, contour level = 0.062298 |
| 5955 | | |
| 5956 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5957 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5958 | | Matrix rotation and translation |
| 5959 | | 0.19709647 -0.96417949 0.17751308 131.33656413 |
| 5960 | | -0.81890803 -0.06236177 0.57052664 127.57866396 |
| 5961 | | -0.53902006 -0.25781567 -0.80186561 125.16673430 |
| 5962 | | Axis -0.74973866 0.64853936 0.13148626 |
| 5963 | | Axis point 0.00000000 145.72358277 48.56133853 |
| 5964 | | Rotation angle (degrees) 146.46675764 |
| 5965 | | Shift along axis 0.72939109 |
| 5966 | | |
| 5967 | | |
| 5968 | | > view matrix models |
| 5969 | | > #4,0.1971,-0.96418,0.17751,113.54,-0.81891,-0.062362,0.57053,102.9,-0.53902,-0.25782,-0.80187,202.44 |
| 5970 | | |
| 5971 | | > fitmap #4 inMap #1 |
| 5972 | | |
| 5973 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5974 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5975 | | average map value = 0.08131, steps = 76 |
| 5976 | | shifted from previous position = 3.68 |
| 5977 | | rotated from previous position = 9.23 degrees |
| 5978 | | atoms outside contour = 1608, contour level = 0.062298 |
| 5979 | | |
| 5980 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 5981 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 5982 | | Matrix rotation and translation |
| 5983 | | 0.10167459 -0.99334567 0.05409855 134.33954956 |
| 5984 | | -0.80520446 -0.05023818 0.59086538 128.42990113 |
| 5985 | | -0.58421576 -0.10363639 -0.80495431 122.76018104 |
| 5986 | | Axis -0.72204027 0.66362485 0.19560142 |
| 5987 | | Axis point 0.00000000 147.30962147 58.22797811 |
| 5988 | | Rotation angle (degrees) 151.25383519 |
| 5989 | | Shift along axis 12.24277501 |
| 5990 | | |
| 5991 | | |
| 5992 | | > view matrix models |
| 5993 | | > #4,0.10167,-0.99335,0.054099,112.18,-0.8052,-0.050238,0.59087,107.37,-0.58422,-0.10364,-0.80495,204.96 |
| 5994 | | |
| 5995 | | > fitmap #4 inMap #1 |
| 5996 | | |
| 5997 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 5998 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 5999 | | average map value = 0.08131, steps = 52 |
| 6000 | | shifted from previous position = 2.54 |
| 6001 | | rotated from previous position = 0.0182 degrees |
| 6002 | | atoms outside contour = 1607, contour level = 0.062298 |
| 6003 | | |
| 6004 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6005 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6006 | | Matrix rotation and translation |
| 6007 | | 0.10195702 -0.99332447 0.05395621 134.34904604 |
| 6008 | | -0.80517880 -0.05054977 0.59087378 128.41624068 |
| 6009 | | -0.58420191 -0.10368812 -0.80495770 122.75397649 |
| 6010 | | Axis -0.72214734 0.66350340 0.19561812 |
| 6011 | | Axis point 0.00000000 147.28246094 58.22653988 |
| 6012 | | Rotation angle (degrees) 151.25577450 |
| 6013 | | Shift along axis 12.19770812 |
| 6014 | | |
| 6015 | | |
| 6016 | | > view matrix models |
| 6017 | | > #4,0.10196,-0.99332,0.053956,111.26,-0.80518,-0.05055,0.59087,107.17,-0.5842,-0.10369,-0.80496,207.23 |
| 6018 | | |
| 6019 | | > fitmap #4 inMap #1 |
| 6020 | | |
| 6021 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6022 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6023 | | average map value = 0.08336, steps = 68 |
| 6024 | | shifted from previous position = 1.48 |
| 6025 | | rotated from previous position = 8.22 degrees |
| 6026 | | atoms outside contour = 1574, contour level = 0.062298 |
| 6027 | | |
| 6028 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6029 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6030 | | Matrix rotation and translation |
| 6031 | | 0.18789959 -0.98167802 0.03165470 132.04596865 |
| 6032 | | -0.72330095 -0.11649711 0.68063512 129.54143262 |
| 6033 | | -0.66447685 -0.15078693 -0.73193840 126.50920598 |
| 6034 | | Axis -0.74585136 0.62448508 0.23178467 |
| 6035 | | Axis point 0.00000000 145.32157515 58.82258898 |
| 6036 | | Rotation angle (degrees) 146.12627360 |
| 6037 | | Shift along axis 11.73292154 |
| 6038 | | |
| 6039 | | |
| 6040 | | > view matrix models |
| 6041 | | > #4,0.1879,-0.98168,0.031655,109.97,-0.7233,-0.1165,0.68064,108.34,-0.66448,-0.15079,-0.73194,208.71 |
| 6042 | | |
| 6043 | | > fitmap #4 inMap #1 |
| 6044 | | |
| 6045 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6046 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6047 | | average map value = 0.08336, steps = 48 |
| 6048 | | shifted from previous position = 2.36 |
| 6049 | | rotated from previous position = 0.00536 degrees |
| 6050 | | atoms outside contour = 1575, contour level = 0.062298 |
| 6051 | | |
| 6052 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6053 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6054 | | Matrix rotation and translation |
| 6055 | | 0.18786079 -0.98168786 0.03157949 132.04734411 |
| 6056 | | -0.72327107 -0.11651285 0.68066417 129.53486944 |
| 6057 | | -0.66452034 -0.15071064 -0.73191463 126.51731987 |
| 6058 | | Axis -0.74583965 0.62448230 0.23182984 |
| 6059 | | Axis point 0.00000000 145.32001157 58.83382322 |
| 6060 | | Rotation angle (degrees) 146.12785506 |
| 6061 | | Shift along axis 11.73657819 |
| 6062 | | |
| 6063 | | |
| 6064 | | > view matrix models |
| 6065 | | > #4,0.18786,-0.98169,0.031579,109,-0.72327,-0.11651,0.68066,107.6,-0.66452,-0.15071,-0.73191,211.81 |
| 6066 | | |
| 6067 | | > fitmap #4 inMap #1 |
| 6068 | | |
| 6069 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6070 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6071 | | average map value = 0.08336, steps = 124 |
| 6072 | | shifted from previous position = 2.64 |
| 6073 | | rotated from previous position = 7.75 degrees |
| 6074 | | atoms outside contour = 1590, contour level = 0.062298 |
| 6075 | | |
| 6076 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6077 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6078 | | Matrix rotation and translation |
| 6079 | | 0.15139786 -0.98535211 -0.07848503 131.27557402 |
| 6080 | | -0.76065102 -0.16684276 0.62735438 128.81541088 |
| 6081 | | -0.63125962 -0.03528039 -0.77476873 128.71266287 |
| 6082 | | Axis -0.74311108 0.61990850 0.25199081 |
| 6083 | | Axis point 0.00000000 138.95025113 67.66918160 |
| 6084 | | Rotation angle (degrees) 153.52215331 |
| 6085 | | Shift along axis 14.73584223 |
| 6086 | | |
| 6087 | | |
| 6088 | | > view matrix models |
| 6089 | | > #4,0.1514,-0.98535,-0.078485,111.24,-0.76065,-0.16684,0.62735,105.63,-0.63126,-0.03528,-0.77477,208.99 |
| 6090 | | |
| 6091 | | > view matrix models |
| 6092 | | > #4,0.1514,-0.98535,-0.078485,111.86,-0.76065,-0.16684,0.62735,105.68,-0.63126,-0.03528,-0.77477,207.55 |
| 6093 | | |
| 6094 | | > fitmap #4 inMap #1 |
| 6095 | | |
| 6096 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6097 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6098 | | average map value = 0.08293, steps = 60 |
| 6099 | | shifted from previous position = 2.67 |
| 6100 | | rotated from previous position = 2.59 degrees |
| 6101 | | atoms outside contour = 1600, contour level = 0.062298 |
| 6102 | | |
| 6103 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6104 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6105 | | Matrix rotation and translation |
| 6106 | | 0.13978570 -0.98596294 -0.09130738 134.56125173 |
| 6107 | | -0.73361924 -0.16505721 0.65921084 128.76045637 |
| 6108 | | -0.66502840 -0.02516340 -0.74639402 123.36562900 |
| 6109 | | Axis -0.73746485 0.61822767 0.27191937 |
| 6110 | | Axis point 0.00000000 140.73122261 66.44589162 |
| 6111 | | Rotation angle (degrees) 152.35417673 |
| 6112 | | Shift along axis 13.91458681 |
| 6113 | | |
| 6114 | | |
| 6115 | | > view matrix models |
| 6116 | | > #4,0.13979,-0.98596,-0.091307,111.81,-0.73362,-0.16506,0.65921,104.3,-0.66503,-0.025163,-0.74639,211.27 |
| 6117 | | |
| 6118 | | > fitmap #4 inMap #1 |
| 6119 | | |
| 6120 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6121 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6122 | | average map value = 0.08336, steps = 80 |
| 6123 | | shifted from previous position = 1.83 |
| 6124 | | rotated from previous position = 2.59 degrees |
| 6125 | | atoms outside contour = 1593, contour level = 0.062298 |
| 6126 | | |
| 6127 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6128 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6129 | | Matrix rotation and translation |
| 6130 | | 0.15135929 -0.98538435 -0.07815403 131.28133938 |
| 6131 | | -0.76057921 -0.16659783 0.62750652 128.81956500 |
| 6132 | | -0.63135539 -0.03553661 -0.77467898 128.70532116 |
| 6133 | | Axis -0.74307385 0.61997395 0.25193960 |
| 6134 | | Axis point 0.00000000 138.97781419 67.64782890 |
| 6135 | | Rotation angle (degrees) 153.50313266 |
| 6136 | | Shift along axis 14.73901103 |
| 6137 | | |
| 6138 | | |
| 6139 | | > ui mousemode right "rotate selected models" |
| 6140 | | |
| 6141 | | > view matrix models |
| 6142 | | > #4,0.51852,-0.85435,0.034965,108.71,-0.75489,-0.43818,0.48799,106.72,-0.40159,-0.27942,-0.87215,211.19 |
| 6143 | | |
| 6144 | | > fitmap #4 inMap #1 |
| 6145 | | |
| 6146 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6147 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6148 | | average map value = 0.08062, steps = 104 |
| 6149 | | shifted from previous position = 2.86 |
| 6150 | | rotated from previous position = 8.48 degrees |
| 6151 | | atoms outside contour = 1595, contour level = 0.062298 |
| 6152 | | |
| 6153 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6154 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6155 | | Matrix rotation and translation |
| 6156 | | 0.40631411 -0.91371967 -0.00501996 129.00945223 |
| 6157 | | -0.82444778 -0.36897414 0.42911997 128.40767725 |
| 6158 | | -0.39394759 -0.17021880 -0.90323356 126.73890299 |
| 6159 | | Axis -0.83238193 0.54015584 0.12398383 |
| 6160 | | Axis point -0.00000000 120.55161440 57.26307472 |
| 6161 | | Rotation angle (degrees) 158.89892691 |
| 6162 | | Shift along axis -22.31140680 |
| 6163 | | |
| 6164 | | |
| 6165 | | > select add #1 |
| 6166 | | |
| 6167 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 6168 | | |
| 6169 | | > select subtract #4 |
| 6170 | | |
| 6171 | | 5 models selected |
| 6172 | | |
| 6173 | | > view matrix models |
| 6174 | | > #1,0.99646,0.031622,-0.077901,-16.07,-0.035033,0.99847,-0.042823,-14.711,0.076428,0.0454,0.99604,68.817 |
| 6175 | | |
| 6176 | | > fitmap #4 inMap #1 |
| 6177 | | |
| 6178 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6179 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6180 | | average map value = 0.08403, steps = 96 |
| 6181 | | shifted from previous position = 1.26 |
| 6182 | | rotated from previous position = 10.3 degrees |
| 6183 | | atoms outside contour = 1574, contour level = 0.062298 |
| 6184 | | |
| 6185 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6186 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6187 | | Matrix rotation and translation |
| 6188 | | 0.28955641 -0.94788142 -0.13295825 130.27092489 |
| 6189 | | -0.90679446 -0.31612686 0.27890432 130.01453999 |
| 6190 | | -0.30639990 0.03980727 -0.95107018 125.54698842 |
| 6191 | | Axis -0.80173649 0.58158183 0.13777217 |
| 6192 | | Axis point -0.00000000 118.20131844 67.57370767 |
| 6193 | | Rotation angle (degrees) 171.42453112 |
| 6194 | | Shift along axis -11.53197997 |
| 6195 | | |
| 6196 | | |
| 6197 | | > view matrix models |
| 6198 | | > #1,0.97856,0.15642,-0.13402,-21.853,-0.1331,0.97673,0.16821,-22.169,0.15721,-0.14676,0.9766,82.173 |
| 6199 | | |
| 6200 | | > fitmap #4 inMap #1 |
| 6201 | | |
| 6202 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6203 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6204 | | average map value = 0.08298, steps = 80 |
| 6205 | | shifted from previous position = 2.58 |
| 6206 | | rotated from previous position = 3.23 degrees |
| 6207 | | atoms outside contour = 1603, contour level = 0.062298 |
| 6208 | | |
| 6209 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6210 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6211 | | Matrix rotation and translation |
| 6212 | | 0.38874714 -0.88999941 -0.23827865 131.71342333 |
| 6213 | | -0.79132357 -0.45498750 0.40840346 125.33886991 |
| 6214 | | -0.47189264 0.02978983 -0.88115260 126.68582309 |
| 6215 | | Axis -0.83084323 0.51265087 0.21653777 |
| 6216 | | Axis point 0.00000000 112.37289788 71.16702933 |
| 6217 | | Rotation angle (degrees) 166.82953273 |
| 6218 | | Shift along axis -17.74585932 |
| 6219 | | |
| 6220 | | |
| 6221 | | > view matrix models |
| 6222 | | > #1,0.99317,0.065671,-0.096394,-17.514,-0.064413,0.99779,0.016111,-17.146,0.097239,-0.0097924,0.99521,72.453 |
| 6223 | | |
| 6224 | | > fitmap #4 inMap #1 |
| 6225 | | |
| 6226 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6227 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6228 | | average map value = 0.08153, steps = 68 |
| 6229 | | shifted from previous position = 0.597 |
| 6230 | | rotated from previous position = 5.05 degrees |
| 6231 | | atoms outside contour = 1542, contour level = 0.062298 |
| 6232 | | |
| 6233 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6234 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6235 | | Matrix rotation and translation |
| 6236 | | 0.42008453 -0.88630751 -0.19490509 130.95854915 |
| 6237 | | -0.84029865 -0.46100721 0.28525521 128.10895757 |
| 6238 | | -0.34267649 0.04394718 -0.93842499 124.89633509 |
| 6239 | | Axis -0.84174665 0.51546598 0.16049115 |
| 6240 | | Axis point 0.00000000 109.66295693 68.91786518 |
| 6241 | | Rotation angle (degrees) 171.75896984 |
| 6242 | | Shift along axis -24.15335356 |
| 6243 | | |
| 6244 | | |
| 6245 | | > view matrix models |
| 6246 | | > #1,0.99865,-0.011217,-0.050767,-14.417,0.0051225,0.99293,-0.11862,-11.161,0.051738,0.1182,0.99164,64.252 |
| 6247 | | |
| 6248 | | > fitmap #4 inMap #1 |
| 6249 | | |
| 6250 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6251 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6252 | | average map value = 0.08351, steps = 84 |
| 6253 | | shifted from previous position = 2.71 |
| 6254 | | rotated from previous position = 0.769 degrees |
| 6255 | | atoms outside contour = 1577, contour level = 0.062298 |
| 6256 | | |
| 6257 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6258 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6259 | | Matrix rotation and translation |
| 6260 | | 0.37974695 -0.91382099 -0.14395642 133.64793060 |
| 6261 | | -0.90141481 -0.40050082 0.16447012 131.45406343 |
| 6262 | | -0.20795092 0.06730742 -0.97582075 122.75493964 |
| 6263 | | Axis -0.83042620 0.54694554 0.10603258 |
| 6264 | | Axis point 0.00000000 111.95198971 67.34136324 |
| 6265 | | Rotation angle (degrees) 176.64618414 |
| 6266 | | Shift along axis -26.07050529 |
| 6267 | | |
| 6268 | | |
| 6269 | | > view matrix models |
| 6270 | | > #1,0.99603,0.036925,-0.080952,-16.288,-0.03975,0.99865,-0.033571,-15.111,0.079603,0.036656,0.99615,69.383 |
| 6271 | | |
| 6272 | | > fitmap #4 inMap #1 |
| 6273 | | |
| 6274 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6275 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6276 | | average map value = 0.08393, steps = 60 |
| 6277 | | shifted from previous position = 1.51 |
| 6278 | | rotated from previous position = 4.26 degrees |
| 6279 | | atoms outside contour = 1537, contour level = 0.062298 |
| 6280 | | |
| 6281 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6282 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6283 | | Matrix rotation and translation |
| 6284 | | 0.35789307 -0.92016669 -0.15876337 134.49890441 |
| 6285 | | -0.89795195 -0.38579139 0.21177180 130.43320348 |
| 6286 | | -0.25611490 0.06677022 -0.96433754 122.92372695 |
| 6287 | | Axis -0.82360315 0.55295277 0.12617883 |
| 6288 | | Axis point 0.00000000 113.73586688 67.93011093 |
| 6289 | | Rotation angle (degrees) 174.94978492 |
| 6290 | | Shift along axis -23.13994841 |
| 6291 | | |
| 6292 | | |
| 6293 | | > view matrix models |
| 6294 | | > #1,0.99525,0.067034,-0.070653,-20.483,-0.070365,0.99647,-0.045747,-10.111,0.067337,0.050501,0.99645,69.278 |
| 6295 | | |
| 6296 | | > fitmap #4 inMap #1 |
| 6297 | | |
| 6298 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6299 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6300 | | average map value = 0.08393, steps = 64 |
| 6301 | | shifted from previous position = 1.15 |
| 6302 | | rotated from previous position = 2 degrees |
| 6303 | | atoms outside contour = 1536, contour level = 0.062298 |
| 6304 | | |
| 6305 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6306 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6307 | | Matrix rotation and translation |
| 6308 | | 0.35792386 -0.92016112 -0.15872627 134.49924705 |
| 6309 | | -0.89793175 -0.38581479 0.21181481 130.43298187 |
| 6310 | | -0.25614270 0.06671178 -0.96433420 122.92301196 |
| 6311 | | Axis -0.82361198 0.55294048 0.12617499 |
| 6312 | | Axis point 0.00000000 113.73666832 67.92670249 |
| 6313 | | Rotation angle (degrees) 174.94629681 |
| 6314 | | Shift along axis -23.14370713 |
| 6315 | | |
| 6316 | | |
| 6317 | | > view matrix models |
| 6318 | | > #1,0.98796,0.15462,-0.0044895,-35.736,-0.15455,0.98544,-0.070935,3.3547,-0.0065438,0.070775,0.99747,75.54 |
| 6319 | | |
| 6320 | | > fitmap #4 inMap #1 |
| 6321 | | |
| 6322 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6323 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6324 | | average map value = 0.0818, steps = 132 |
| 6325 | | shifted from previous position = 2.63 |
| 6326 | | rotated from previous position = 8.04 degrees |
| 6327 | | atoms outside contour = 1593, contour level = 0.062298 |
| 6328 | | |
| 6329 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6330 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6331 | | Matrix rotation and translation |
| 6332 | | 0.38103516 -0.91436898 -0.13689988 128.57268177 |
| 6333 | | -0.91581310 -0.39358976 0.07983404 132.17259226 |
| 6334 | | -0.12688016 0.09495513 -0.98736262 123.92284374 |
| 6335 | | Axis 0.83097005 -0.55062751 -0.07936072 |
| 6336 | | Axis point 0.00000000 108.34001157 68.49932653 |
| 6337 | | Rotation angle (degrees) 179.47868964 |
| 6338 | | Shift along axis 24.22757579 |
| 6339 | | |
| 6340 | | |
| 6341 | | > view matrix models |
| 6342 | | > #1,0.99368,-0.024224,-0.10957,-6.5405,0.023196,0.99967,-0.010648,-24.81,0.10979,0.0080388,0.99392,69.203 |
| 6343 | | |
| 6344 | | > fitmap #4 inMap #1 |
| 6345 | | |
| 6346 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6347 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6348 | | average map value = 0.08447, steps = 88 |
| 6349 | | shifted from previous position = 3.3 |
| 6350 | | rotated from previous position = 3.74 degrees |
| 6351 | | atoms outside contour = 1530, contour level = 0.062298 |
| 6352 | | |
| 6353 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6354 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6355 | | Matrix rotation and translation |
| 6356 | | 0.15560475 -0.96882505 -0.19278274 131.97625658 |
| 6357 | | -0.97475122 -0.18223349 0.12903880 128.11077297 |
| 6358 | | -0.16014749 0.16783616 -0.97271980 122.68783195 |
| 6359 | | Axis 0.76008790 -0.63936449 -0.11610096 |
| 6360 | | Axis point 0.00000000 118.52863601 72.52129394 |
| 6361 | | Rotation angle (degrees) 178.53755949 |
| 6362 | | Shift along axis 4.15990225 |
| 6363 | | |
| 6364 | | |
| 6365 | | > view matrix models |
| 6366 | | > #1,0.99648,-0.0049688,-0.083632,-11.546,0.0039374,0.99991,-0.012493,-22.421,0.083687,0.01212,0.99642,71.534 |
| 6367 | | |
| 6368 | | > fitmap #4 inMap #1 |
| 6369 | | |
| 6370 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6371 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6372 | | average map value = 0.08447, steps = 88 |
| 6373 | | shifted from previous position = 0.992 |
| 6374 | | rotated from previous position = 1.88 degrees |
| 6375 | | atoms outside contour = 1528, contour level = 0.062298 |
| 6376 | | |
| 6377 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6378 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6379 | | Matrix rotation and translation |
| 6380 | | 0.15535013 -0.96887584 -0.19273282 131.97717895 |
| 6381 | | -0.97474578 -0.18202648 0.12937167 128.11150726 |
| 6382 | | -0.16042757 0.16776760 -0.97268547 122.68575531 |
| 6383 | | Axis 0.76000506 -0.63944698 -0.11618895 |
| 6384 | | Axis point 0.00000000 118.55312889 72.51777774 |
| 6385 | | Rotation angle (degrees) 178.55253700 |
| 6386 | | Shift along axis 4.12807866 |
| 6387 | | |
| 6388 | | |
| 6389 | | > ui mousemode right translate |
| 6390 | | |
| 6391 | | > ui mousemode right "translate selected models" |
| 6392 | | |
| 6393 | | > view matrix models |
| 6394 | | > #1,0.99648,-0.0049688,-0.083632,-11.895,0.0039374,0.99991,-0.012493,-24.56,0.083687,0.01212,0.99642,73.23 |
| 6395 | | |
| 6396 | | > fitmap #4 inMap #1 |
| 6397 | | |
| 6398 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6399 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6400 | | average map value = 0.08447, steps = 80 |
| 6401 | | shifted from previous position = 2.76 |
| 6402 | | rotated from previous position = 0.0216 degrees |
| 6403 | | atoms outside contour = 1526, contour level = 0.062298 |
| 6404 | | |
| 6405 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6406 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6407 | | Matrix rotation and translation |
| 6408 | | 0.15568734 -0.96883339 -0.19267411 131.98984808 |
| 6409 | | -0.97471884 -0.18231975 0.12916151 128.10138931 |
| 6410 | | -0.16026428 0.16769427 -0.97272503 122.68689181 |
| 6411 | | Axis 0.76011569 -0.63933178 -0.11609914 |
| 6412 | | Axis point 0.00000000 118.53190591 72.51381662 |
| 6413 | | Rotation angle (degrees) 178.54758907 |
| 6414 | | Shift along axis 4.18442233 |
| 6415 | | |
| 6416 | | |
| 6417 | | > view matrix models |
| 6418 | | > #1,0.99648,-0.0049688,-0.083632,-12.616,0.0039374,0.99991,-0.012493,-26.912,0.083687,0.01212,0.99642,75.672 |
| 6419 | | |
| 6420 | | > fitmap #4 inMap #1 |
| 6421 | | |
| 6422 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6423 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6424 | | average map value = 0.08447, steps = 68 |
| 6425 | | shifted from previous position = 3.47 |
| 6426 | | rotated from previous position = 0.0114 degrees |
| 6427 | | atoms outside contour = 1527, contour level = 0.062298 |
| 6428 | | |
| 6429 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6430 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6431 | | Matrix rotation and translation |
| 6432 | | 0.15563693 -0.96881747 -0.19279483 131.97670490 |
| 6433 | | -0.97474746 -0.18226508 0.12902262 128.10821217 |
| 6434 | | -0.16013913 0.16784559 -0.97271955 122.68775147 |
| 6435 | | Axis 0.76009843 -0.63935204 -0.11610061 |
| 6436 | | Axis point 0.00000000 118.52503613 72.52181712 |
| 6437 | | Rotation angle (degrees) 178.53661422 |
| 6438 | | Shift along axis 4.16491743 |
| 6439 | | |
| 6440 | | |
| 6441 | | > ui mousemode right "rotate selected models" |
| 6442 | | |
| 6443 | | > view matrix models |
| 6444 | | > #1,0.99302,0.045586,-0.10876,-15.157,-0.037714,0.99659,0.073369,-30.341,0.11173,-0.068756,0.99136,81.67 |
| 6445 | | |
| 6446 | | > fitmap #4 inMap #1 |
| 6447 | | |
| 6448 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6449 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6450 | | average map value = 0.08447, steps = 60 |
| 6451 | | shifted from previous position = 1.63 |
| 6452 | | rotated from previous position = 5.68 degrees |
| 6453 | | atoms outside contour = 1526, contour level = 0.062298 |
| 6454 | | |
| 6455 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6456 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6457 | | Matrix rotation and translation |
| 6458 | | 0.15568992 -0.96884080 -0.19263478 131.99315362 |
| 6459 | | -0.97473036 -0.18230454 0.12909600 128.10256668 |
| 6460 | | -0.16019167 0.16766803 -0.97274152 122.69034061 |
| 6461 | | Axis 0.76011645 -0.63933758 -0.11606224 |
| 6462 | | Axis point 0.00000000 118.53325551 72.51372716 |
| 6463 | | Rotation angle (degrees) 178.54610991 |
| 6464 | | Shift along axis 4.18966585 |
| 6465 | | |
| 6466 | | |
| 6467 | | > view matrix models |
| 6468 | | > #1,0.96774,0.18363,-0.17251,-20.75,-0.18989,0.98159,-0.020384,-1.6989,0.1656,0.052485,0.9848,62.992 |
| 6469 | | |
| 6470 | | > fitmap #4 inMap #1 |
| 6471 | | |
| 6472 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6473 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6474 | | average map value = 0.08361, steps = 92 |
| 6475 | | shifted from previous position = 2.84 |
| 6476 | | rotated from previous position = 9.22 degrees |
| 6477 | | atoms outside contour = 1558, contour level = 0.062298 |
| 6478 | | |
| 6479 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6480 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6481 | | Matrix rotation and translation |
| 6482 | | 0.31710937 -0.92096355 -0.22642391 130.61795704 |
| 6483 | | -0.92392657 -0.35387149 0.14537762 131.54121737 |
| 6484 | | -0.21401246 0.16309846 -0.96311866 122.62373135 |
| 6485 | | Axis 0.81150758 -0.56836963 -0.13568867 |
| 6486 | | Axis point -0.00000000 111.09305501 72.70227035 |
| 6487 | | Rotation angle (degrees) 179.37440524 |
| 6488 | | Shift along axis 14.59477746 |
| 6489 | | |
| 6490 | | |
| 6491 | | > view matrix models |
| 6492 | | > #1,0.95813,0.19502,-0.20966,-17.143,-0.20759,0.97742,-0.039497,2.7182,0.19722,0.081366,0.97698,56.994 |
| 6493 | | |
| 6494 | | > fitmap #4 inMap #1 |
| 6495 | | |
| 6496 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6497 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6498 | | average map value = 0.08361, steps = 72 |
| 6499 | | shifted from previous position = 1.28 |
| 6500 | | rotated from previous position = 2.63 degrees |
| 6501 | | atoms outside contour = 1557, contour level = 0.062298 |
| 6502 | | |
| 6503 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6504 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6505 | | Matrix rotation and translation |
| 6506 | | 0.31738536 -0.92092546 -0.22619202 130.62386633 |
| 6507 | | -0.92388411 -0.35406332 0.14518033 131.53184448 |
| 6508 | | -0.21378656 0.16289710 -0.96320291 122.61723528 |
| 6509 | | Axis 0.81159260 -0.56828526 -0.13553343 |
| 6510 | | Axis point -0.00000000 111.07904570 72.68573743 |
| 6511 | | Rotation angle (degrees) 179.37461445 |
| 6512 | | Shift along axis 14.64702014 |
| 6513 | | |
| 6514 | | |
| 6515 | | > view matrix models |
| 6516 | | > #1,0.94336,0.18125,-0.27788,-7.1041,-0.20503,0.97699,-0.058782,4.4023,0.26083,0.11243,0.95881,48.094 |
| 6517 | | |
| 6518 | | > fitmap #4 inMap #1 |
| 6519 | | |
| 6520 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6521 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6522 | | average map value = 0.08361, steps = 56 |
| 6523 | | shifted from previous position = 2.2 |
| 6524 | | rotated from previous position = 4.21 degrees |
| 6525 | | atoms outside contour = 1559, contour level = 0.062298 |
| 6526 | | |
| 6527 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6528 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6529 | | Matrix rotation and translation |
| 6530 | | 0.31743467 -0.92091270 -0.22617476 130.62500831 |
| 6531 | | -0.92387001 -0.35410636 0.14516506 131.53249154 |
| 6532 | | -0.21377427 0.16287566 -0.96320926 122.61485202 |
| 6533 | | Axis 0.81160779 -0.56826634 -0.13552179 |
| 6534 | | Axis point 0.00000000 111.07755764 72.68333260 |
| 6535 | | Rotation angle (degrees) 179.37484442 |
| 6536 | | Shift along axis 14.65380315 |
| 6537 | | |
| 6538 | | |
| 6539 | | > view matrix models |
| 6540 | | > #1,0.92509,0.26052,-0.27628,-13.713,-0.29339,0.95225,-0.084463,19.881,0.24108,0.15919,0.95736,45.475 |
| 6541 | | |
| 6542 | | > fitmap #4 inMap #1 |
| 6543 | | |
| 6544 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6545 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6546 | | average map value = 0.08361, steps = 80 |
| 6547 | | shifted from previous position = 2.73 |
| 6548 | | rotated from previous position = 5.48 degrees |
| 6549 | | atoms outside contour = 1557, contour level = 0.062298 |
| 6550 | | |
| 6551 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6552 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6553 | | Matrix rotation and translation |
| 6554 | | 0.31738198 -0.92090635 -0.22627457 130.62470597 |
| 6555 | | -0.92388029 -0.35407684 0.14517166 131.53161685 |
| 6556 | | -0.21380809 0.16297575 -0.96318482 122.61625739 |
| 6557 | | Axis 0.81159150 -0.56827914 -0.13556572 |
| 6558 | | Axis point 0.00000000 111.07673207 72.69024488 |
| 6559 | | Rotation angle (degrees) 179.37153136 |
| 6560 | | Shift along axis 14.64466599 |
| 6561 | | |
| 6562 | | |
| 6563 | | > select subtract #1 |
| 6564 | | |
| 6565 | | Nothing selected |
| 6566 | | |
| 6567 | | > select add #4 |
| 6568 | | |
| 6569 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 6570 | | |
| 6571 | | > view matrix models |
| 6572 | | > #4,0.27792,-0.75256,0.597,105.01,-0.92184,-0.034169,0.38607,95.954,-0.27014,-0.65764,-0.70324,216.07 |
| 6573 | | |
| 6574 | | > fitmap #4 inMap #1 |
| 6575 | | |
| 6576 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6577 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6578 | | average map value = 0.08066, steps = 72 |
| 6579 | | shifted from previous position = 4.84 |
| 6580 | | rotated from previous position = 7.05 degrees |
| 6581 | | atoms outside contour = 1638, contour level = 0.062298 |
| 6582 | | |
| 6583 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6584 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6585 | | Matrix rotation and translation |
| 6586 | | 0.43224852 -0.88524174 0.17177972 126.12851172 |
| 6587 | | -0.86360050 -0.35155399 0.36139170 132.16380930 |
| 6588 | | -0.25952917 -0.30456008 -0.91645391 127.57065023 |
| 6589 | | Axis -0.83902872 0.54340353 0.02726567 |
| 6590 | | Axis point -0.00000000 122.75968922 47.49153577 |
| 6591 | | Rotation angle (degrees) 156.61804985 |
| 6592 | | Shift along axis -30.52886338 |
| 6593 | | |
| 6594 | | |
| 6595 | | > view matrix models |
| 6596 | | > #4,0.37238,-0.063753,0.92589,101.92,-0.92397,-0.11925,0.36339,96.258,0.087244,-0.99082,-0.10331,214.34 |
| 6597 | | |
| 6598 | | > fitmap #4 inMap #1 |
| 6599 | | |
| 6600 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6601 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6602 | | average map value = 0.08276, steps = 100 |
| 6603 | | shifted from previous position = 4.13 |
| 6604 | | rotated from previous position = 12.7 degrees |
| 6605 | | atoms outside contour = 1550, contour level = 0.062298 |
| 6606 | | |
| 6607 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6608 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6609 | | Matrix rotation and translation |
| 6610 | | 0.62319755 -0.05052738 0.78043052 128.65975647 |
| 6611 | | -0.75050318 -0.31926986 0.57862918 129.12090518 |
| 6612 | | 0.21993133 -0.94631588 -0.23688916 121.51539047 |
| 6613 | | Axis -0.86200735 0.31683399 -0.39567608 |
| 6614 | | Axis point 0.00000000 114.37313401 -27.03376210 |
| 6615 | | Rotation angle (degrees) 117.80609477 |
| 6616 | | Shift along axis -118.07649730 |
| 6617 | | |
| 6618 | | |
| 6619 | | > ui mousemode right "move picked models" |
| 6620 | | |
| 6621 | | > view matrix models |
| 6622 | | > #1,0.92509,0.26052,-0.27628,-13.329,-0.29339,0.95225,-0.084463,22.313,0.24108,0.15919,0.95736,40.891 |
| 6623 | | |
| 6624 | | > fitmap #4 inMap #1 |
| 6625 | | |
| 6626 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6627 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6628 | | average map value = 0.08377, steps = 80 |
| 6629 | | shifted from previous position = 2.04 |
| 6630 | | rotated from previous position = 10.5 degrees |
| 6631 | | atoms outside contour = 1581, contour level = 0.062298 |
| 6632 | | |
| 6633 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6634 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6635 | | Matrix rotation and translation |
| 6636 | | 0.62639156 0.02352655 0.77915346 130.91005108 |
| 6637 | | -0.76746018 -0.15644676 0.62171480 127.05741315 |
| 6638 | | 0.13652284 -0.98740615 -0.07994124 124.34396133 |
| 6639 | | Axis -0.84481336 0.33739100 -0.41528026 |
| 6640 | | Axis point 0.00000000 121.96542171 -42.27545822 |
| 6641 | | Rotation angle (degrees) 107.75805679 |
| 6642 | | Shift along axis -119.36412453 |
| 6643 | | |
| 6644 | | |
| 6645 | | > view matrix models |
| 6646 | | > #1,0.92509,0.26052,-0.27628,-12.424,-0.29339,0.95225,-0.084463,19.002,0.24108,0.15919,0.95736,41.263 |
| 6647 | | |
| 6648 | | > fitmap #4 inMap #1 |
| 6649 | | |
| 6650 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6651 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6652 | | average map value = 0.08253, steps = 112 |
| 6653 | | shifted from previous position = 0.893 |
| 6654 | | rotated from previous position = 4.7 degrees |
| 6655 | | atoms outside contour = 1596, contour level = 0.062298 |
| 6656 | | |
| 6657 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6658 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6659 | | Matrix rotation and translation |
| 6660 | | 0.65489139 0.08255030 0.75120085 128.83142793 |
| 6661 | | -0.72887278 -0.19361411 0.65670241 130.64955142 |
| 6662 | | 0.19965406 -0.97759860 -0.06662754 123.40462485 |
| 6663 | | Axis -0.85736631 0.28934550 -0.42567851 |
| 6664 | | Axis point 0.00000000 116.98134268 -41.48038811 |
| 6665 | | Rotation angle (degrees) 107.61834885 |
| 6666 | | Shift along axis -125.18356347 |
| 6667 | | |
| 6668 | | |
| 6669 | | > view matrix models |
| 6670 | | > #1,0.92509,0.26052,-0.27628,-13.351,-0.29339,0.95225,-0.084463,22.661,0.24108,0.15919,0.95736,40.552 |
| 6671 | | |
| 6672 | | > fitmap #4 inMap #1 |
| 6673 | | |
| 6674 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6675 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6676 | | average map value = 0.08377, steps = 52 |
| 6677 | | shifted from previous position = 0.576 |
| 6678 | | rotated from previous position = 4.68 degrees |
| 6679 | | atoms outside contour = 1587, contour level = 0.062298 |
| 6680 | | |
| 6681 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6682 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6683 | | Matrix rotation and translation |
| 6684 | | 0.62686055 0.02338327 0.77878051 130.91268205 |
| 6685 | | -0.76706753 -0.15669287 0.62213725 127.04054319 |
| 6686 | | 0.13657695 -0.98737053 -0.08028803 124.35542201 |
| 6687 | | Axis -0.84503406 0.33717381 -0.41500753 |
| 6688 | | Axis point 0.00000000 121.93590990 -42.20368792 |
| 6689 | | Rotation angle (degrees) 107.76178422 |
| 6690 | | Shift along axis -119.39936761 |
| 6691 | | |
| 6692 | | |
| 6693 | | > view matrix models |
| 6694 | | > #1,0.92509,0.26052,-0.27628,-14.785,-0.29339,0.95225,-0.084463,25.636,0.24108,0.15919,0.95736,42.765 |
| 6695 | | |
| 6696 | | > fitmap #4 inMap #1 |
| 6697 | | |
| 6698 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6699 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6700 | | average map value = 0.08143, steps = 100 |
| 6701 | | shifted from previous position = 2.79 |
| 6702 | | rotated from previous position = 11.7 degrees |
| 6703 | | atoms outside contour = 1585, contour level = 0.062298 |
| 6704 | | |
| 6705 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6706 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6707 | | Matrix rotation and translation |
| 6708 | | 0.49546443 -0.09376043 0.86355312 130.28037576 |
| 6709 | | -0.86791284 -0.09377672 0.48778400 124.89926450 |
| 6710 | | 0.03524634 -0.99116846 -0.12783891 123.26556285 |
| 6711 | | Axis -0.79363407 0.44448520 -0.41542493 |
| 6712 | | Axis point 0.00000000 134.29044162 -45.22095707 |
| 6713 | | Rotation angle (degrees) 111.28919984 |
| 6714 | | Shift along axis -99.08665790 |
| 6715 | | |
| 6716 | | |
| 6717 | | > ui mousemode right "rotate selected models" |
| 6718 | | |
| 6719 | | > view matrix models |
| 6720 | | > #4,0.029694,0.030628,0.99909,105.02,-0.99953,0.0090252,0.02943,96.576,-0.0081156,-0.99949,0.030881,212.53 |
| 6721 | | |
| 6722 | | > fitmap #4 inMap #1 |
| 6723 | | |
| 6724 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6725 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6726 | | average map value = 0.08054, steps = 92 |
| 6727 | | shifted from previous position = 2.23 |
| 6728 | | rotated from previous position = 8.28 degrees |
| 6729 | | atoms outside contour = 1566, contour level = 0.062298 |
| 6730 | | |
| 6731 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6732 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6733 | | Matrix rotation and translation |
| 6734 | | 0.27533447 -0.33711336 0.90030301 133.52652262 |
| 6735 | | -0.96101308 -0.07178053 0.26702326 125.39400674 |
| 6736 | | -0.02539288 -0.93872368 -0.34373400 124.09165548 |
| 6737 | | Axis -0.73379566 0.56336168 -0.37969402 |
| 6738 | | Axis point 0.00000000 148.11871720 -32.16509907 |
| 6739 | | Rotation angle (degrees) 124.75650427 |
| 6740 | | Shift along axis -74.45586311 |
| 6741 | | |
| 6742 | | |
| 6743 | | > view matrix models |
| 6744 | | > #4,0.010811,-0.26618,0.96386,107.76,-0.8587,0.49143,0.14535,93.604,-0.51236,-0.82924,-0.22326,214.81 |
| 6745 | | |
| 6746 | | > fitmap #4 inMap #1 |
| 6747 | | |
| 6748 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6749 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6750 | | average map value = 0.08013, steps = 88 |
| 6751 | | shifted from previous position = 5.05 |
| 6752 | | rotated from previous position = 9.77 degrees |
| 6753 | | atoms outside contour = 1625, contour level = 0.062298 |
| 6754 | | |
| 6755 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6756 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6757 | | Matrix rotation and translation |
| 6758 | | 0.20027356 -0.68204302 0.70335469 132.86926673 |
| 6759 | | -0.91352865 0.12943516 0.38563187 126.35320731 |
| 6760 | | -0.35405636 -0.71976653 -0.59714340 129.10868929 |
| 6761 | | Axis -0.71448349 0.68346646 -0.14962267 |
| 6762 | | Axis point 0.00000000 168.12552902 2.45703695 |
| 6763 | | Rotation angle (degrees) 129.32491694 |
| 6764 | | Shift along axis -27.89230438 |
| 6765 | | |
| 6766 | | |
| 6767 | | > fitmap #4 inMap #1 |
| 6768 | | |
| 6769 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6770 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6771 | | average map value = 0.08013, steps = 28 |
| 6772 | | shifted from previous position = 0.0258 |
| 6773 | | rotated from previous position = 0.0461 degrees |
| 6774 | | atoms outside contour = 1624, contour level = 0.062298 |
| 6775 | | |
| 6776 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6777 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6778 | | Matrix rotation and translation |
| 6779 | | 0.20015177 -0.68200145 0.70342966 132.88633881 |
| 6780 | | -0.91327774 0.13010317 0.38600122 126.35555611 |
| 6781 | | -0.35477182 -0.71968548 -0.59681636 129.09073218 |
| 6782 | | Axis -0.71433971 0.68366143 -0.14941831 |
| 6783 | | Axis point 0.00000000 168.20335619 2.42914253 |
| 6784 | | Rotation angle (degrees) 129.29258408 |
| 6785 | | Shift along axis -27.83008816 |
| 6786 | | |
| 6787 | | |
| 6788 | | > ui mousemode right "translate selected models" |
| 6789 | | |
| 6790 | | > view matrix models |
| 6791 | | > #4,0.045249,-0.39819,0.91619,111.42,-0.89843,0.38477,0.2116,93.967,-0.43678,-0.83271,-0.34033,212.08 |
| 6792 | | |
| 6793 | | > fitmap #4 inMap #1 |
| 6794 | | |
| 6795 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6796 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6797 | | average map value = 0.07916, steps = 80 |
| 6798 | | shifted from previous position = 3.4 |
| 6799 | | rotated from previous position = 3.32 degrees |
| 6800 | | atoms outside contour = 1657, contour level = 0.062298 |
| 6801 | | |
| 6802 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6803 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6804 | | Matrix rotation and translation |
| 6805 | | 0.23776913 -0.65569643 0.71660870 140.34285803 |
| 6806 | | -0.91844067 0.08834050 0.38556801 126.29668017 |
| 6807 | | -0.31612114 -0.74983875 -0.58121363 122.38880227 |
| 6808 | | Axis -0.72915728 0.66321825 -0.16873414 |
| 6809 | | Axis point 0.00000000 164.95041807 -5.00585185 |
| 6810 | | Rotation angle (degrees) 128.86974341 |
| 6811 | | Shift along axis -39.22092207 |
| 6812 | | |
| 6813 | | |
| 6814 | | > view matrix models |
| 6815 | | > #4,0.068025,-0.3764,0.92396,109.65,-0.91765,0.33983,0.206,96.728,-0.39153,-0.86188,-0.32229,218.45 |
| 6816 | | |
| 6817 | | > fitmap #4 inMap #1 |
| 6818 | | |
| 6819 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6820 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6821 | | average map value = 0.07979, steps = 128 |
| 6822 | | shifted from previous position = 0.481 |
| 6823 | | rotated from previous position = 12.2 degrees |
| 6824 | | atoms outside contour = 1620, contour level = 0.062298 |
| 6825 | | |
| 6826 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6827 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6828 | | Matrix rotation and translation |
| 6829 | | 0.06016798 -0.74386703 0.66561375 137.03011789 |
| 6830 | | -0.95722066 0.14607806 0.24977952 128.18168969 |
| 6831 | | -0.28303431 -0.65216796 -0.70325567 127.41045309 |
| 6832 | | Axis -0.68006903 0.71528130 -0.16086879 |
| 6833 | | Axis point 162.29020208 0.00000000 45.75800995 |
| 6834 | | Rotation angle (degrees) 138.46102596 |
| 6835 | | Shift along axis -22.00033900 |
| 6836 | | |
| 6837 | | |
| 6838 | | > ui mousemode right translate |
| 6839 | | |
| 6840 | | > ui mousemode right rotate |
| 6841 | | |
| 6842 | | > ui mousemode right "rotate selected models" |
| 6843 | | |
| 6844 | | > view matrix models |
| 6845 | | > #4,0.25938,0.24815,0.93335,106.98,-0.90892,-0.26397,0.32277,98.006,0.32647,-0.93206,0.15708,214.82 |
| 6846 | | |
| 6847 | | > fitmap #4 inMap #1 |
| 6848 | | |
| 6849 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6850 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6851 | | average map value = 0.08396, steps = 176 |
| 6852 | | shifted from previous position = 3.83 |
| 6853 | | rotated from previous position = 12.9 degrees |
| 6854 | | atoms outside contour = 1588, contour level = 0.062298 |
| 6855 | | |
| 6856 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6857 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6858 | | Matrix rotation and translation |
| 6859 | | 0.54075347 0.10402817 0.83472380 130.81934117 |
| 6860 | | -0.82492007 -0.12859123 0.55042818 128.28312955 |
| 6861 | | 0.16459819 -0.98622636 0.01627877 121.87169502 |
| 6862 | | Axis -0.80176454 0.34964459 -0.48468783 |
| 6863 | | Axis point 0.00000000 122.47983029 -57.58612171 |
| 6864 | | Rotation angle (degrees) 106.60544824 |
| 6865 | | Shift along axis -119.10253310 |
| 6866 | | |
| 6867 | | |
| 6868 | | > view matrix models |
| 6869 | | > #4,-0.042037,0.83051,0.55541,106.38,-0.019523,-0.55648,0.83063,96.335,0.99893,0.024074,0.039607,207.13 |
| 6870 | | |
| 6871 | | > fitmap #4 inMap #1 |
| 6872 | | |
| 6873 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6874 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6875 | | average map value = 0.08105, steps = 96 |
| 6876 | | shifted from previous position = 4.89 |
| 6877 | | rotated from previous position = 8.35 degrees |
| 6878 | | atoms outside contour = 1586, contour level = 0.062298 |
| 6879 | | |
| 6880 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6881 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6882 | | Matrix rotation and translation |
| 6883 | | 0.21672100 0.88709516 0.40754655 134.39117952 |
| 6884 | | 0.14599105 -0.44222411 0.88494319 127.00963918 |
| 6885 | | 0.96525573 -0.13228763 -0.22534720 120.84823917 |
| 6886 | | Axis -0.73894323 -0.40513463 -0.53835753 |
| 6887 | | Axis point 0.00000000 27.92140370 0.78723612 |
| 6888 | | Rotation angle (degrees) 136.50422725 |
| 6889 | | Shift along axis -215.82301525 |
| 6890 | | |
| 6891 | | |
| 6892 | | > ui mousemode right rotate |
| 6893 | | |
| 6894 | | > volume #1 step 1 |
| 6895 | | |
| 6896 | | > ui mousemode right "rotate selected models" |
| 6897 | | |
| 6898 | | > view matrix models |
| 6899 | | > #4,0.020421,0.57426,0.81842,109.16,-0.61121,-0.64064,0.46476,99.31,0.79121,-0.50972,0.33791,212.24 |
| 6900 | | |
| 6901 | | > fitmap #4 inMap #1 |
| 6902 | | |
| 6903 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6904 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6905 | | average map value = 0.08271, steps = 84 |
| 6906 | | shifted from previous position = 1.64 |
| 6907 | | rotated from previous position = 6.07 degrees |
| 6908 | | atoms outside contour = 1612, contour level = 0.062298 |
| 6909 | | |
| 6910 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6911 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6912 | | Matrix rotation and translation |
| 6913 | | 0.39044265 0.60525523 0.69370068 133.36394779 |
| 6914 | | -0.52829021 -0.46980126 0.70724552 130.59335503 |
| 6915 | | 0.75396551 -0.64261410 0.13631996 122.87610623 |
| 6916 | | Axis -0.76535173 -0.03416932 -0.64270459 |
| 6917 | | Axis point 0.00000000 63.74895020 -43.20488984 |
| 6918 | | Rotation angle (degrees) 118.13296434 |
| 6919 | | Shift along axis -185.50565192 |
| 6920 | | |
| 6921 | | |
| 6922 | | > view matrix models |
| 6923 | | > #4,-0.26163,0.96401,-0.047309,111.26,-0.10584,0.020064,0.99418,94.61,0.95935,0.26512,0.096784,210.3 |
| 6924 | | |
| 6925 | | > fitmap #4 inMap #1 |
| 6926 | | |
| 6927 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6928 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6929 | | average map value = 0.07711, steps = 72 |
| 6930 | | shifted from previous position = 2.14 |
| 6931 | | rotated from previous position = 2.37 degrees |
| 6932 | | atoms outside contour = 1695, contour level = 0.062298 |
| 6933 | | |
| 6934 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6935 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6936 | | Matrix rotation and translation |
| 6937 | | 0.04032098 0.93759281 -0.34538956 136.86737308 |
| 6938 | | -0.02195247 0.34641848 0.93782318 125.73745761 |
| 6939 | | 0.99894560 -0.03023180 0.03455041 117.68676537 |
| 6940 | | Axis -0.50565864 -0.70220669 -0.50121364 |
| 6941 | | Axis point 18.30920440 0.00000000 28.45295574 |
| 6942 | | Rotation angle (degrees) 106.81934853 |
| 6943 | | Shift along axis -216.48806474 |
| 6944 | | |
| 6945 | | |
| 6946 | | > view matrix models |
| 6947 | | > #4,-0.082332,0.99642,0.019394,111.25,-0.13179,-0.030174,0.99082,95.56,0.98785,0.079021,0.1338,208.76 |
| 6948 | | |
| 6949 | | > fitmap #4 inMap #1 |
| 6950 | | |
| 6951 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6952 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6953 | | average map value = 0.08152, steps = 136 |
| 6954 | | shifted from previous position = 4.19 |
| 6955 | | rotated from previous position = 17.7 degrees |
| 6956 | | atoms outside contour = 1673, contour level = 0.062298 |
| 6957 | | |
| 6958 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6959 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6960 | | Matrix rotation and translation |
| 6961 | | 0.35006582 0.91264520 -0.21102763 136.02946890 |
| 6962 | | 0.25169859 0.12535244 0.95965337 124.42595493 |
| 6963 | | 0.90227587 -0.38905720 -0.18582991 123.25663372 |
| 6964 | | Axis -0.72139908 -0.59548441 -0.35352750 |
| 6965 | | Axis point 0.00000000 28.52302601 30.24747561 |
| 6966 | | Rotation angle (degrees) 110.80605947 |
| 6967 | | Shift along axis -215.79985868 |
| 6968 | | |
| 6969 | | |
| 6970 | | > view matrix models |
| 6971 | | > #4,-0.47735,0.8481,-0.22991,112.44,0.21299,0.36552,0.90611,92.282,0.85251,0.38356,-0.35512,213.09 |
| 6972 | | |
| 6973 | | > fitmap #4 inMap #1 |
| 6974 | | |
| 6975 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 6976 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 6977 | | average map value = 0.08178, steps = 120 |
| 6978 | | shifted from previous position = 4.24 |
| 6979 | | rotated from previous position = 12.8 degrees |
| 6980 | | atoms outside contour = 1649, contour level = 0.062298 |
| 6981 | | |
| 6982 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 6983 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 6984 | | Matrix rotation and translation |
| 6985 | | -0.17227440 0.72715567 -0.66450445 135.42675505 |
| 6986 | | 0.33648203 0.67745369 0.65409200 122.72746058 |
| 6987 | | 0.92579770 -0.11091050 -0.36138274 121.09445598 |
| 6988 | | Axis -0.42324701 -0.87985415 -0.21614498 |
| 6989 | | Axis point 9.53053085 0.00000000 65.03049858 |
| 6990 | | Rotation angle (degrees) 115.34715112 |
| 6991 | | Shift along axis -191.47519231 |
| 6992 | | |
| 6993 | | |
| 6994 | | > view matrix models |
| 6995 | | > #4,-0.519,0.69188,-0.50194,110.5,0.38568,0.7136,0.58483,92.261,0.76281,0.10994,-0.63721,212.1 |
| 6996 | | |
| 6997 | | > fitmap #4 inMap #1 |
| 6998 | | |
| 6999 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7000 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7001 | | average map value = 0.08046, steps = 124 |
| 7002 | | shifted from previous position = 2.98 |
| 7003 | | rotated from previous position = 13 degrees |
| 7004 | | atoms outside contour = 1670, contour level = 0.062298 |
| 7005 | | |
| 7006 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7007 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7008 | | Matrix rotation and translation |
| 7009 | | -0.24353671 0.46477865 -0.85127591 135.20101371 |
| 7010 | | 0.23872514 0.87942498 0.41185192 124.41093581 |
| 7011 | | 0.94005329 -0.10291990 -0.32512661 123.18228140 |
| 7012 | | Axis -0.27418157 -0.95411098 -0.12040229 |
| 7013 | | Axis point 12.17196560 0.00000000 86.09260256 |
| 7014 | | Rotation angle (degrees) 110.15855009 |
| 7015 | | Shift along axis -170.60289401 |
| 7016 | | |
| 7017 | | |
| 7018 | | > ui mousemode right "translate selected models" |
| 7019 | | |
| 7020 | | > view matrix models |
| 7021 | | > #4,-0.42282,0.68751,-0.59039,111.7,0.21938,0.70977,0.66941,95.229,0.87926,0.15352,-0.45093,210.07 |
| 7022 | | |
| 7023 | | > fitmap #4 inMap #1 |
| 7024 | | |
| 7025 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7026 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7027 | | average map value = 0.08248, steps = 132 |
| 7028 | | shifted from previous position = 1.81 |
| 7029 | | rotated from previous position = 13 degrees |
| 7030 | | atoms outside contour = 1612, contour level = 0.062298 |
| 7031 | | |
| 7032 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7033 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7034 | | Matrix rotation and translation |
| 7035 | | -0.15885716 0.64476894 -0.74768805 134.37097814 |
| 7036 | | 0.30785985 0.75189571 0.58298813 125.74075471 |
| 7037 | | 0.93807607 -0.13757129 -0.31794249 119.06567383 |
| 7038 | | Axis -0.38656520 -0.90437751 -0.18074474 |
| 7039 | | Axis point 8.07731203 0.00000000 70.42103215 |
| 7040 | | Rotation angle (degrees) 111.25085665 |
| 7041 | | Shift along axis -187.18074936 |
| 7042 | | |
| 7043 | | |
| 7044 | | > ui mousemode right "move picked models" |
| 7045 | | |
| 7046 | | > view matrix models |
| 7047 | | > #1,0.92509,0.26052,-0.27628,-16.29,-0.29339,0.95225,-0.084463,21.451,0.24108,0.15919,0.95736,31.267 |
| 7048 | | |
| 7049 | | > fitmap #4 inMap #1 |
| 7050 | | |
| 7051 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7052 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7053 | | average map value = 0.07411, steps = 112 |
| 7054 | | shifted from previous position = 2.8 |
| 7055 | | rotated from previous position = 10 degrees |
| 7056 | | atoms outside contour = 1802, contour level = 0.062298 |
| 7057 | | |
| 7058 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7059 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7060 | | Matrix rotation and translation |
| 7061 | | -0.22725269 0.59266680 -0.77272394 136.28135733 |
| 7062 | | 0.15102069 0.80533328 0.57326351 129.79164369 |
| 7063 | | 0.96205455 0.01357837 -0.27251910 128.30317367 |
| 7064 | | Axis -0.29840835 -0.92493502 -0.23547326 |
| 7065 | | Axis point 15.84177146 0.00000000 77.47255995 |
| 7066 | | Rotation angle (degrees) 110.31732639 |
| 7067 | | Shift along axis -190.92829920 |
| 7068 | | |
| 7069 | | |
| 7070 | | > view matrix models |
| 7071 | | > #1,0.92509,0.26052,-0.27628,-16.604,-0.29339,0.95225,-0.084463,21.801,0.24108,0.15919,0.95736,38.662 |
| 7072 | | |
| 7073 | | > fitmap #4 inMap #1 |
| 7074 | | |
| 7075 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7076 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7077 | | average map value = 0.07909, steps = 80 |
| 7078 | | shifted from previous position = 1.57 |
| 7079 | | rotated from previous position = 4.44 degrees |
| 7080 | | atoms outside contour = 1672, contour level = 0.062298 |
| 7081 | | |
| 7082 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7083 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7084 | | Matrix rotation and translation |
| 7085 | | -0.25575601 0.64337281 -0.72156794 135.02788378 |
| 7086 | | 0.16511091 0.76449527 0.62312548 127.01020362 |
| 7087 | | 0.95253727 0.04022935 -0.30175212 120.36649992 |
| 7088 | | Axis -0.31747051 -0.91179028 -0.26048217 |
| 7089 | | Axis point 19.85557803 0.00000000 68.96930330 |
| 7090 | | Rotation angle (degrees) 113.35995929 |
| 7091 | | Shift along axis -190.02736700 |
| 7092 | | |
| 7093 | | |
| 7094 | | > view matrix models |
| 7095 | | > #1,0.92509,0.26052,-0.27628,-14.618,-0.29339,0.95225,-0.084463,25.221,0.24108,0.15919,0.95736,37.009 |
| 7096 | | |
| 7097 | | > fitmap #4 inMap #1 |
| 7098 | | |
| 7099 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7100 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7101 | | average map value = 0.08325, steps = 112 |
| 7102 | | shifted from previous position = 2.78 |
| 7103 | | rotated from previous position = 9.99 degrees |
| 7104 | | atoms outside contour = 1642, contour level = 0.062298 |
| 7105 | | |
| 7106 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7107 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7108 | | Matrix rotation and translation |
| 7109 | | -0.23462993 0.73064565 -0.64117528 133.75307207 |
| 7110 | | 0.31282773 0.68125309 0.66184064 124.22984721 |
| 7111 | | 0.92037362 -0.04528978 -0.38840858 125.79167529 |
| 7112 | | Axis -0.40078103 -0.88504066 -0.23680709 |
| 7113 | | Axis point 11.63937264 0.00000000 65.34054126 |
| 7114 | | Rotation angle (degrees) 118.09225980 |
| 7115 | | Shift along axis -193.34252005 |
| 7116 | | |
| 7117 | | |
| 7118 | | > view matrix models |
| 7119 | | > #1,0.92509,0.26052,-0.27628,-17.548,-0.29339,0.95225,-0.084463,26.995,0.24108,0.15919,0.95736,40.131 |
| 7120 | | |
| 7121 | | > fitmap #4 inMap #1 |
| 7122 | | |
| 7123 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7124 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7125 | | average map value = 0.08178, steps = 60 |
| 7126 | | shifted from previous position = 1.33 |
| 7127 | | rotated from previous position = 4.1 degrees |
| 7128 | | atoms outside contour = 1650, contour level = 0.062298 |
| 7129 | | |
| 7130 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7131 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7132 | | Matrix rotation and translation |
| 7133 | | -0.17204984 0.72707437 -0.66465157 135.41927141 |
| 7134 | | 0.33663658 0.67748864 0.65397627 122.72019047 |
| 7135 | | 0.92578327 -0.11122952 -0.36132164 121.11026514 |
| 7136 | | Axis -0.42332391 -0.87985365 -0.21599635 |
| 7137 | | Axis point 9.50052054 0.00000000 65.04761469 |
| 7138 | | Rotation angle (degrees) 115.33698821 |
| 7139 | | Shift along axis -191.46139823 |
| 7140 | | |
| 7141 | | |
| 7142 | | > view matrix models |
| 7143 | | > #1,0.92509,0.26052,-0.27628,-15.419,-0.29339,0.95225,-0.084463,26.954,0.24108,0.15919,0.95736,37.626 |
| 7144 | | |
| 7145 | | > fitmap #4 inMap #1 |
| 7146 | | |
| 7147 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7148 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7149 | | average map value = 0.08152, steps = 80 |
| 7150 | | shifted from previous position = 3.45 |
| 7151 | | rotated from previous position = 4.05 degrees |
| 7152 | | atoms outside contour = 1628, contour level = 0.062298 |
| 7153 | | |
| 7154 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7155 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7156 | | Matrix rotation and translation |
| 7157 | | -0.10937029 0.72741080 -0.67743019 130.63569502 |
| 7158 | | 0.31033600 0.67244017 0.67194925 121.81007029 |
| 7159 | | 0.94431441 -0.13673969 -0.29928673 123.41741040 |
| 7160 | | Axis -0.43488053 -0.87210931 -0.22428613 |
| 7161 | | Axis point 3.52669781 0.00000000 64.62861445 |
| 7162 | | Rotation angle (degrees) 111.59900627 |
| 7163 | | Shift along axis -190.72343081 |
| 7164 | | |
| 7165 | | |
| 7166 | | > view matrix models |
| 7167 | | > #1,0.92509,0.26052,-0.27628,-12.053,-0.29339,0.95225,-0.084463,26.307,0.24108,0.15919,0.95736,33.775 |
| 7168 | | |
| 7169 | | > fitmap #4 inMap #1 |
| 7170 | | |
| 7171 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7172 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7173 | | average map value = 0.07954, steps = 72 |
| 7174 | | shifted from previous position = 3.41 |
| 7175 | | rotated from previous position = 4.99 degrees |
| 7176 | | atoms outside contour = 1678, contour level = 0.062298 |
| 7177 | | |
| 7178 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7179 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7180 | | Matrix rotation and translation |
| 7181 | | -0.14401462 0.67833759 -0.72049837 125.87619366 |
| 7182 | | 0.34428859 0.71694772 0.60617764 120.78896284 |
| 7183 | | 0.92775275 -0.16076093 -0.33679484 126.47464561 |
| 7184 | | Axis -0.41492432 -0.89172655 -0.18072511 |
| 7185 | | Axis point -0.20179601 0.00000000 69.75747123 |
| 7186 | | Rotation angle (degrees) 112.45333633 |
| 7187 | | Shift along axis -182.79696378 |
| 7188 | | |
| 7189 | | |
| 7190 | | > view matrix models |
| 7191 | | > #1,0.92509,0.26052,-0.27628,-15.995,-0.29339,0.95225,-0.084463,28.245,0.24108,0.15919,0.95736,38.06 |
| 7192 | | |
| 7193 | | > fitmap #4 inMap #1 |
| 7194 | | |
| 7195 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7196 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7197 | | average map value = 0.08152, steps = 84 |
| 7198 | | shifted from previous position = 3.77 |
| 7199 | | rotated from previous position = 4.98 degrees |
| 7200 | | atoms outside contour = 1628, contour level = 0.062298 |
| 7201 | | |
| 7202 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7203 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7204 | | Matrix rotation and translation |
| 7205 | | -0.10955876 0.72730877 -0.67750929 130.63703947 |
| 7206 | | 0.31036464 0.67256427 0.67181179 121.80787368 |
| 7207 | | 0.94428315 -0.13667206 -0.29941623 123.41588644 |
| 7208 | | Axis -0.43478819 -0.87217104 -0.22422511 |
| 7209 | | Axis point 3.53712052 0.00000000 64.63981854 |
| 7210 | | Rotation angle (degrees) 111.60497941 |
| 7211 | | Shift along axis -190.70968364 |
| 7212 | | |
| 7213 | | |
| 7214 | | > view matrix models |
| 7215 | | > #1,0.92509,0.26052,-0.27628,-20.094,-0.29339,0.95225,-0.084463,29.507,0.24108,0.15919,0.95736,42.659 |
| 7216 | | |
| 7217 | | > fitmap #4 inMap #1 |
| 7218 | | |
| 7219 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7220 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7221 | | average map value = 0.08319, steps = 144 |
| 7222 | | shifted from previous position = 3.91 |
| 7223 | | rotated from previous position = 13.4 degrees |
| 7224 | | atoms outside contour = 1579, contour level = 0.062298 |
| 7225 | | |
| 7226 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7227 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7228 | | Matrix rotation and translation |
| 7229 | | 0.05753091 0.82983729 -0.55503177 132.13178403 |
| 7230 | | 0.34290779 0.50570386 0.79162987 121.91674061 |
| 7231 | | 0.93760569 -0.23586791 -0.25546407 121.84150964 |
| 7232 | | Axis -0.54759448 -0.79548595 -0.25950412 |
| 7233 | | Axis point -6.42696153 0.00000000 50.71162804 |
| 7234 | | Rotation angle (degrees) 110.24985290 |
| 7235 | | Shift along axis -200.95606392 |
| 7236 | | |
| 7237 | | |
| 7238 | | > view matrix models |
| 7239 | | > #1,0.92509,0.26052,-0.27628,-21.831,-0.29339,0.95225,-0.084463,34.273,0.24108,0.15919,0.95736,43.805 |
| 7240 | | |
| 7241 | | > fitmap #4 inMap #1 |
| 7242 | | |
| 7243 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7244 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7245 | | average map value = 0.08261, steps = 108 |
| 7246 | | shifted from previous position = 5.07 |
| 7247 | | rotated from previous position = 14 degrees |
| 7248 | | atoms outside contour = 1601, contour level = 0.062298 |
| 7249 | | |
| 7250 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7251 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7252 | | Matrix rotation and translation |
| 7253 | | 0.15939021 0.89769774 -0.41077187 133.32041980 |
| 7254 | | 0.46169442 0.30000045 0.83476822 121.83616368 |
| 7255 | | 0.87260130 -0.32270497 -0.36664490 124.08794047 |
| 7256 | | Axis -0.64939639 -0.72003214 -0.24461817 |
| 7257 | | Axis point -19.79651550 0.00000000 41.52536546 |
| 7258 | | Rotation angle (degrees) 116.97663530 |
| 7259 | | Shift along axis -204.65791797 |
| 7260 | | |
| 7261 | | |
| 7262 | | > view matrix models |
| 7263 | | > #1,0.92509,0.26052,-0.27628,-19.094,-0.29339,0.95225,-0.084463,34.047,0.24108,0.15919,0.95736,40.616 |
| 7264 | | |
| 7265 | | > fitmap #4 inMap #1 |
| 7266 | | |
| 7267 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7268 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7269 | | average map value = 0.08598, steps = 92 |
| 7270 | | shifted from previous position = 4.12 |
| 7271 | | rotated from previous position = 5.13 degrees |
| 7272 | | atoms outside contour = 1509, contour level = 0.062298 |
| 7273 | | |
| 7274 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7275 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7276 | | Matrix rotation and translation |
| 7277 | | 0.19178589 0.85987098 -0.47311739 128.33662516 |
| 7278 | | 0.50488778 0.32694407 0.79887165 120.62733825 |
| 7279 | | 0.84160947 -0.39208350 -0.37143509 125.91572283 |
| 7280 | | Axis -0.65830846 -0.72672411 -0.19621935 |
| 7281 | | Axis point -28.55358202 0.00000000 46.12540620 |
| 7282 | | Rotation angle (degrees) 115.23630627 |
| 7283 | | Shift along axis -196.85498311 |
| 7284 | | |
| 7285 | | |
| 7286 | | > ui mousemode right "rotate selected models" |
| 7287 | | |
| 7288 | | > view matrix models |
| 7289 | | > #4,-0.12564,0.91087,0.39309,95.603,-0.24794,-0.41249,0.87657,103.84,0.96059,0.012669,0.27767,209.15 |
| 7290 | | |
| 7291 | | > fitmap #4 inMap #1 |
| 7292 | | |
| 7293 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7294 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7295 | | average map value = 0.08029, steps = 124 |
| 7296 | | shifted from previous position = 2.29 |
| 7297 | | rotated from previous position = 16.5 degrees |
| 7298 | | atoms outside contour = 1649, contour level = 0.062298 |
| 7299 | | |
| 7300 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7301 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7302 | | Matrix rotation and translation |
| 7303 | | 0.25471169 0.96168194 -0.10143868 126.27749151 |
| 7304 | | -0.00980271 0.10746094 0.99416098 120.74329515 |
| 7305 | | 0.96696735 -0.25223005 0.03679865 122.43341995 |
| 7306 | | Axis -0.65339731 -0.56009199 -0.50928275 |
| 7307 | | Axis point 0.00000000 14.22725028 11.03342646 |
| 7308 | | Rotation angle (degrees) 107.48849946 |
| 7309 | | Shift along axis -212.48995437 |
| 7310 | | |
| 7311 | | |
| 7312 | | > view matrix models |
| 7313 | | > #4,0.54118,0.83069,0.13066,94.704,0.54876,-0.46661,0.69365,102.29,0.63717,-0.30369,-0.70837,213.66 |
| 7314 | | |
| 7315 | | > fitmap #4 inMap #1 |
| 7316 | | |
| 7317 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7318 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7319 | | average map value = 0.08443, steps = 120 |
| 7320 | | shifted from previous position = 2.39 |
| 7321 | | rotated from previous position = 14.5 degrees |
| 7322 | | atoms outside contour = 1567, contour level = 0.062298 |
| 7323 | | |
| 7324 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7325 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7326 | | Matrix rotation and translation |
| 7327 | | 0.34449018 0.91662269 -0.20280373 127.03414821 |
| 7328 | | 0.88204281 -0.24205579 0.40423938 124.04124450 |
| 7329 | | 0.32144517 -0.31813807 -0.89188630 127.00402944 |
| 7330 | | Axis -0.80872399 -0.58691293 -0.03871325 |
| 7331 | | Axis point 0.00000000 33.41512246 57.81925517 |
| 7332 | | Rotation angle (degrees) 153.47325150 |
| 7333 | | Shift along axis -180.45371292 |
| 7334 | | |
| 7335 | | |
| 7336 | | > view matrix models |
| 7337 | | > #4,0.41931,0.86985,-0.25987,96.947,0.90282,-0.42961,0.018717,104.91,-0.09536,-0.24246,-0.96546,215 |
| 7338 | | |
| 7339 | | > fitmap #4 inMap #1 |
| 7340 | | |
| 7341 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7342 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7343 | | average map value = 0.08315, steps = 108 |
| 7344 | | shifted from previous position = 3.09 |
| 7345 | | rotated from previous position = 13.6 degrees |
| 7346 | | atoms outside contour = 1607, contour level = 0.062298 |
| 7347 | | |
| 7348 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7349 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7350 | | Matrix rotation and translation |
| 7351 | | 0.24372432 0.76933815 -0.59052287 128.53426642 |
| 7352 | | 0.95007558 -0.31170683 -0.01397310 128.02239478 |
| 7353 | | -0.19482005 -0.55763578 -0.80689992 127.49589789 |
| 7354 | | Axis -0.78080236 -0.56830404 0.25957310 |
| 7355 | | Axis point 0.00000000 36.08771318 79.53831898 |
| 7356 | | Rotation angle (degrees) 159.62618905 |
| 7357 | | Shift along axis -140.02099657 |
| 7358 | | |
| 7359 | | |
| 7360 | | > view matrix models |
| 7361 | | > #4,-0.12106,0.63777,0.76065,96.259,0.9588,-0.12326,0.25594,103.25,0.25699,0.7603,-0.59657,210.22 |
| 7362 | | |
| 7363 | | > fitmap #4 inMap #1 |
| 7364 | | |
| 7365 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7366 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7367 | | average map value = 0.08039, steps = 88 |
| 7368 | | shifted from previous position = 1.39 |
| 7369 | | rotated from previous position = 7.64 degrees |
| 7370 | | atoms outside contour = 1684, contour level = 0.062298 |
| 7371 | | |
| 7372 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7373 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7374 | | Matrix rotation and translation |
| 7375 | | -0.36904189 0.76224582 0.53177945 128.40492107 |
| 7376 | | 0.92656031 0.25694309 0.27471120 123.03218751 |
| 7377 | | 0.07276041 0.59410568 -0.80108949 123.92720403 |
| 7378 | | Axis 0.54799030 0.78754645 0.28191704 |
| 7379 | | Axis point 27.72691710 0.00000000 38.27810705 |
| 7380 | | Rotation angle (degrees) 163.05680329 |
| 7381 | | Shift along axis 202.19540447 |
| 7382 | | |
| 7383 | | |
| 7384 | | > view matrix models |
| 7385 | | > #4,0.046228,0.6857,0.72642,95.757,0.89201,-0.35567,0.27897,104.01,0.44965,0.63507,-0.62809,210.12 |
| 7386 | | |
| 7387 | | > fitmap #4 inMap #1 |
| 7388 | | |
| 7389 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7390 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7391 | | average map value = 0.07823, steps = 112 |
| 7392 | | shifted from previous position = 3.33 |
| 7393 | | rotated from previous position = 13.1 degrees |
| 7394 | | atoms outside contour = 1693, contour level = 0.062298 |
| 7395 | | |
| 7396 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7397 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7398 | | Matrix rotation and translation |
| 7399 | | -0.24878049 0.82640032 0.50514432 129.86767491 |
| 7400 | | 0.95305147 0.11591081 0.27974557 122.51966660 |
| 7401 | | 0.17263013 0.55102378 -0.81643838 126.01280364 |
| 7402 | | Axis 0.60629638 0.74315643 0.28306046 |
| 7403 | | Axis point 20.12794798 0.00000000 39.26927868 |
| 7404 | | Rotation angle (degrees) 167.07252641 |
| 7405 | | Shift along axis 205.45882123 |
| 7406 | | |
| 7407 | | |
| 7408 | | > ui mousemode right "translate selected models" |
| 7409 | | |
| 7410 | | > view matrix models |
| 7411 | | > #4,0.046228,0.6857,0.72642,98.138,0.89201,-0.35567,0.27897,101.13,0.44965,0.63507,-0.62809,206.32 |
| 7412 | | |
| 7413 | | > fitmap #4 inMap #1 |
| 7414 | | |
| 7415 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7416 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7417 | | average map value = 0.07744, steps = 100 |
| 7418 | | shifted from previous position = 1.26 |
| 7419 | | rotated from previous position = 10.7 degrees |
| 7420 | | atoms outside contour = 1704, contour level = 0.062298 |
| 7421 | | |
| 7422 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7423 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7424 | | Matrix rotation and translation |
| 7425 | | 0.06974009 0.90963562 0.40951112 129.36711751 |
| 7426 | | 0.92618832 -0.21153110 0.31213745 121.94673322 |
| 7427 | | 0.37055568 0.35751593 -0.85724609 121.02722010 |
| 7428 | | Axis 0.73127153 0.62776476 0.26674588 |
| 7429 | | Axis point 0.00000000 4.73703341 36.85781943 |
| 7430 | | Rotation angle (degrees) 178.22199255 |
| 7431 | | Shift along axis 203.43986291 |
| 7432 | | |
| 7433 | | |
| 7434 | | > view matrix models |
| 7435 | | > #4,0.046228,0.6857,0.72642,92.336,0.89201,-0.35567,0.27897,97.802,0.44965,0.63507,-0.62809,215.83 |
| 7436 | | |
| 7437 | | > fitmap #4 inMap #1 |
| 7438 | | |
| 7439 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7440 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7441 | | average map value = 0.07932, steps = 180 |
| 7442 | | shifted from previous position = 6.84 |
| 7443 | | rotated from previous position = 14.8 degrees |
| 7444 | | atoms outside contour = 1659, contour level = 0.062298 |
| 7445 | | |
| 7446 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7447 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7448 | | Matrix rotation and translation |
| 7449 | | -0.26580340 0.77850619 0.56857424 125.69734085 |
| 7450 | | 0.94388696 0.09023863 0.31770174 117.80686132 |
| 7451 | | 0.19602541 0.62111601 -0.75880758 124.65239143 |
| 7452 | | Axis 0.59711065 0.73316549 0.32546465 |
| 7453 | | Axis point 20.06475962 0.00000000 35.73027687 |
| 7454 | | Rotation angle (degrees) 165.28159072 |
| 7455 | | Shift along axis 201.99709265 |
| 7456 | | |
| 7457 | | |
| 7458 | | > view matrix models |
| 7459 | | > #4,0.046228,0.6857,0.72642,94.317,0.89201,-0.35567,0.27897,106.91,0.44965,0.63507,-0.62809,212.4 |
| 7460 | | |
| 7461 | | > fitmap #4 inMap #1 |
| 7462 | | |
| 7463 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7464 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7465 | | average map value = 0.07823, steps = 128 |
| 7466 | | shifted from previous position = 5.9 |
| 7467 | | rotated from previous position = 13.1 degrees |
| 7468 | | atoms outside contour = 1694, contour level = 0.062298 |
| 7469 | | |
| 7470 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7471 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7472 | | Matrix rotation and translation |
| 7473 | | -0.24883251 0.82628267 0.50531112 129.86525198 |
| 7474 | | 0.95305496 0.11594880 0.27971793 122.52053025 |
| 7475 | | 0.17253586 0.55119218 -0.81634463 126.00928064 |
| 7476 | | Axis 0.60626412 0.74316329 0.28311153 |
| 7477 | | Axis point 20.13247814 0.00000000 39.26277880 |
| 7478 | | Rotation angle (degrees) 167.06232189 |
| 7479 | | Shift along axis 205.46008330 |
| 7480 | | |
| 7481 | | |
| 7482 | | > view matrix models |
| 7483 | | > #4,0.046228,0.6857,0.72642,102.44,0.89201,-0.35567,0.27897,111.24,0.44965,0.63507,-0.62809,205.17 |
| 7484 | | |
| 7485 | | > fitmap #4 inMap #1 |
| 7486 | | |
| 7487 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7488 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7489 | | average map value = 0.07691, steps = 180 |
| 7490 | | shifted from previous position = 6.02 |
| 7491 | | rotated from previous position = 15.6 degrees |
| 7492 | | atoms outside contour = 1767, contour level = 0.062298 |
| 7493 | | |
| 7494 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7495 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7496 | | Matrix rotation and translation |
| 7497 | | 0.04522434 0.97026486 0.23778322 133.19375006 |
| 7498 | | 0.95397776 -0.11258068 0.27794250 134.01186225 |
| 7499 | | 0.29644764 0.21427014 -0.93070248 122.24860452 |
| 7500 | | Axis -0.72275887 -0.66591258 -0.18487848 |
| 7501 | | Axis point 0.00000000 6.92402789 44.15878429 |
| 7502 | | Rotation angle (degrees) 177.47541090 |
| 7503 | | Shift along axis -208.10828494 |
| 7504 | | |
| 7505 | | |
| 7506 | | > view matrix models |
| 7507 | | > #4,0.20846,0.80906,0.54952,102.98,0.87012,-0.40997,0.27352,107.09,0.44658,0.42113,-0.78944,214.96 |
| 7508 | | |
| 7509 | | > fitmap #4 inMap #1 |
| 7510 | | |
| 7511 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7512 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7513 | | average map value = 0.07629, steps = 80 |
| 7514 | | shifted from previous position = 2.23 |
| 7515 | | rotated from previous position = 2.35 degrees |
| 7516 | | atoms outside contour = 1755, contour level = 0.062298 |
| 7517 | | |
| 7518 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7519 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7520 | | Matrix rotation and translation |
| 7521 | | 0.08443442 0.96572285 0.24545917 131.39487561 |
| 7522 | | 0.95366251 -0.14971494 0.26098518 130.07593576 |
| 7523 | | 0.28878825 0.21204907 -0.93361477 126.75141647 |
| 7524 | | Axis -0.73626812 -0.65190776 -0.18145393 |
| 7525 | | Axis point 0.00000000 7.87978580 47.22136424 |
| 7526 | | Rotation angle (degrees) 178.09556568 |
| 7527 | | Shift along axis -204.53891275 |
| 7528 | | |
| 7529 | | |
| 7530 | | > view matrix models |
| 7531 | | > #4,0.24677,0.7958,0.553,102.6,0.85896,-0.44381,0.25536,103.39,0.44865,0.41199,-0.79308,213.69 |
| 7532 | | |
| 7533 | | > fitmap #4 inMap #1 |
| 7534 | | |
| 7535 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7536 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7537 | | average map value = 0.08139, steps = 176 |
| 7538 | | shifted from previous position = 3.85 |
| 7539 | | rotated from previous position = 17.7 degrees |
| 7540 | | atoms outside contour = 1670, contour level = 0.062298 |
| 7541 | | |
| 7542 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7543 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7544 | | Matrix rotation and translation |
| 7545 | | 0.02341180 0.98621936 0.16377807 135.19480376 |
| 7546 | | 0.83615358 -0.10911555 0.53753232 123.03334406 |
| 7547 | | 0.54799552 0.12435902 -0.82718544 122.38245337 |
| 7548 | | Axis -0.70769714 -0.65810057 -0.25703773 |
| 7549 | | Axis point 0.00000000 5.91901549 38.10692555 |
| 7550 | | Rotation angle (degrees) 163.02742516 |
| 7551 | | Shift along axis -208.10219820 |
| 7552 | | |
| 7553 | | |
| 7554 | | > view matrix models |
| 7555 | | > #4,0.088092,0.84956,0.52008,101.24,0.74308,-0.40376,0.53368,102.33,0.66338,0.33945,-0.66686,213.55 |
| 7556 | | |
| 7557 | | > fitmap #4 inMap #1 |
| 7558 | | |
| 7559 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7560 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7561 | | average map value = 0.08273, steps = 104 |
| 7562 | | shifted from previous position = 3.54 |
| 7563 | | rotated from previous position = 11.8 degrees |
| 7564 | | atoms outside contour = 1593, contour level = 0.062298 |
| 7565 | | |
| 7566 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7567 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7568 | | Matrix rotation and translation |
| 7569 | | -0.06841742 0.99707087 0.03418684 134.51249866 |
| 7570 | | 0.75418520 0.02925821 0.65600963 121.01142678 |
| 7571 | | 0.65308785 0.07066569 -0.75397787 124.04892136 |
| 7572 | | Axis -0.66080075 -0.69868367 -0.27419611 |
| 7573 | | Axis point -1.19391016 0.00000000 37.84976482 |
| 7574 | | Rotation angle (degrees) 153.71061963 |
| 7575 | | Shift along axis -207.44839849 |
| 7576 | | |
| 7577 | | |
| 7578 | | > view matrix models |
| 7579 | | > #4,-0.047248,0.91048,0.41084,102.83,0.68309,-0.27064,0.67834,95.988,0.72881,0.31269,-0.60915,211.38 |
| 7580 | | |
| 7581 | | > fitmap #4 inMap #1 |
| 7582 | | |
| 7583 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7584 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7585 | | average map value = 0.08414, steps = 180 |
| 7586 | | shifted from previous position = 3.5 |
| 7587 | | rotated from previous position = 12.9 degrees |
| 7588 | | atoms outside contour = 1616, contour level = 0.062298 |
| 7589 | | |
| 7590 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7591 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7592 | | Matrix rotation and translation |
| 7593 | | 0.03638150 0.99552897 -0.08716917 136.60837332 |
| 7594 | | 0.64183338 0.04358112 0.76560473 121.17108566 |
| 7595 | | 0.76598061 -0.08380193 -0.63737817 125.39524286 |
| 7596 | | Axis -0.67694017 -0.67992328 -0.28188000 |
| 7597 | | Axis point -9.17149384 0.00000000 36.10424365 |
| 7598 | | Rotation angle (degrees) 141.14241265 |
| 7599 | | Shift along axis -210.20914930 |
| 7600 | | |
| 7601 | | |
| 7602 | | > view matrix models |
| 7603 | | > #4,-0.010759,0.95546,0.29491,105.51,0.53582,-0.2435,0.80846,103.42,0.84427,0.16672,-0.50933,210.36 |
| 7604 | | |
| 7605 | | > fitmap #4 inMap #1 |
| 7606 | | |
| 7607 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7608 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7609 | | average map value = 0.0844, steps = 80 |
| 7610 | | shifted from previous position = 2.66 |
| 7611 | | rotated from previous position = 5.25 degrees |
| 7612 | | atoms outside contour = 1593, contour level = 0.062298 |
| 7613 | | |
| 7614 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7615 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7616 | | Matrix rotation and translation |
| 7617 | | -0.04622979 0.99324162 -0.10646071 135.84555236 |
| 7618 | | 0.61460816 0.11229651 0.78079850 123.30380643 |
| 7619 | | 0.78747674 -0.02933547 -0.61564586 120.43501093 |
| 7620 | | Axis -0.64070655 -0.70698378 -0.29944793 |
| 7621 | | Axis point -2.42759700 0.00000000 34.38683062 |
| 7622 | | Rotation angle (degrees) 140.78595800 |
| 7623 | | Shift along axis -210.27493965 |
| 7624 | | |
| 7625 | | |
| 7626 | | > ui mousemode right "rotate selected models" |
| 7627 | | |
| 7628 | | > view matrix models |
| 7629 | | > #4,-0.021438,0.98028,0.19646,105.36,0.63445,-0.13853,0.76045,101.22,0.77267,0.14095,-0.61897,209.08 |
| 7630 | | |
| 7631 | | > fitmap #4 inMap #1 |
| 7632 | | |
| 7633 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7634 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7635 | | average map value = 0.0844, steps = 92 |
| 7636 | | shifted from previous position = 0.176 |
| 7637 | | rotated from previous position = 9.8 degrees |
| 7638 | | atoms outside contour = 1592, contour level = 0.062298 |
| 7639 | | |
| 7640 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7641 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7642 | | Matrix rotation and translation |
| 7643 | | -0.04634382 0.99317285 -0.10705111 135.85036237 |
| 7644 | | 0.61457876 0.11283181 0.78074447 123.29355054 |
| 7645 | | 0.78749298 -0.02960866 -0.61561200 120.45072468 |
| 7646 | | Axis -0.64059740 -0.70715173 -0.29928482 |
| 7647 | | Axis point -2.41616343 0.00000000 34.42650589 |
| 7648 | | Rotation angle (degrees) 140.76533918 |
| 7649 | | Shift along axis -210.26170948 |
| 7650 | | |
| 7651 | | |
| 7652 | | > ui mousemode right rotate |
| 7653 | | |
| 7654 | | > ui mousemode right "rotate selected models" |
| 7655 | | |
| 7656 | | > view matrix models |
| 7657 | | > #4,-0.10033,0.95635,0.27445,105.53,0.53232,-0.18144,0.82687,102.77,0.84058,0.22905,-0.49088,207.6 |
| 7658 | | |
| 7659 | | Drag select of 1 cryosparc_P1050_J339_004_volume_map_sharp.mrc , 3 residues |
| 7660 | | |
| 7661 | | > view matrix models |
| 7662 | | > #1,0.94023,0.23824,-0.24334,-21.826,-0.25809,0.96468,-0.052749,25.312,0.22218,0.1124,0.96851,46.765,#4,-0.088782,0.96789,0.23516,106.01,0.56329,-0.14592,0.81327,104.15,0.82147,0.20466,-0.53225,206.7 |
| 7663 | | |
| 7664 | | > select subtract #1 |
| 7665 | | |
| 7666 | | 26 atoms, 3 residues, 2 models selected |
| 7667 | | |
| 7668 | | > view matrix models |
| 7669 | | > #4,-0.28711,0.95457,0.079763,107.03,0.67781,0.14361,0.72107,103.29,0.67686,0.26109,-0.68825,207.38 |
| 7670 | | |
| 7671 | | > fitmap #4 inMap #1 |
| 7672 | | |
| 7673 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7674 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7675 | | average map value = 0.08201, steps = 96 |
| 7676 | | shifted from previous position = 3.3 |
| 7677 | | rotated from previous position = 5.96 degrees |
| 7678 | | atoms outside contour = 1611, contour level = 0.062298 |
| 7679 | | |
| 7680 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7681 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7682 | | Matrix rotation and translation |
| 7683 | | -0.21790528 0.95238070 -0.21327983 138.02287308 |
| 7684 | | 0.66166211 0.30480231 0.68505386 126.68022440 |
| 7685 | | 0.71744027 0.00815767 -0.69657226 121.12247246 |
| 7686 | | Axis -0.57026268 -0.78410093 -0.24492081 |
| 7687 | | Axis point 8.21433741 0.00000000 44.88140359 |
| 7688 | | Rotation angle (degrees) 143.59457581 |
| 7689 | | Shift along axis -207.70478938 |
| 7690 | | |
| 7691 | | |
| 7692 | | > view matrix models |
| 7693 | | > #4,-0.84318,0.27568,0.46157,109.39,0.24542,-0.5665,0.78667,106.28,0.47835,0.77658,0.41,203.45 |
| 7694 | | |
| 7695 | | > fitmap #4 inMap #1 |
| 7696 | | |
| 7697 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7698 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7699 | | average map value = 0.07994, steps = 100 |
| 7700 | | shifted from previous position = 1.94 |
| 7701 | | rotated from previous position = 5.81 degrees |
| 7702 | | atoms outside contour = 1659, contour level = 0.062298 |
| 7703 | | |
| 7704 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7705 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7706 | | Matrix rotation and translation |
| 7707 | | -0.74372916 0.53281263 0.40370489 138.06192108 |
| 7708 | | 0.13359138 -0.47326665 0.87073074 128.85462385 |
| 7709 | | 0.65499640 0.70151933 0.28080303 115.17091962 |
| 7710 | | Axis -0.33764205 -0.50142354 -0.79660045 |
| 7711 | | Axis point 46.78723432 22.62341917 0.00000000 |
| 7712 | | Rotation angle (degrees) 165.48827638 |
| 7713 | | Shift along axis -202.97145840 |
| 7714 | | |
| 7715 | | |
| 7716 | | > view matrix models |
| 7717 | | > #4,-0.84032,0.29691,0.45354,109.35,0.23148,-0.56,0.7955,106.27,0.49018,0.77346,0.40186,203.45 |
| 7718 | | |
| 7719 | | > ui mousemode right pivot |
| 7720 | | |
| 7721 | | [Repeated 1 time(s)] |
| 7722 | | |
| 7723 | | > ui mousemode right "translate selected models" |
| 7724 | | |
| 7725 | | > view matrix models |
| 7726 | | > #4,-0.84032,0.29691,0.45354,112.19,0.23148,-0.56,0.7955,110.21,0.49018,0.77346,0.40186,206.42 |
| 7727 | | |
| 7728 | | > fitmap #4 inMap #1 |
| 7729 | | |
| 7730 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7731 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7732 | | average map value = 0.07993, steps = 76 |
| 7733 | | shifted from previous position = 4.12 |
| 7734 | | rotated from previous position = 6.84 degrees |
| 7735 | | atoms outside contour = 1659, contour level = 0.062298 |
| 7736 | | |
| 7737 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7738 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7739 | | Matrix rotation and translation |
| 7740 | | -0.74356558 0.53298663 0.40377653 138.06204345 |
| 7741 | | 0.13384245 -0.47300034 0.87083688 128.84546644 |
| 7742 | | 0.65513085 0.70156677 0.28037054 115.18329193 |
| 7743 | | Axis -0.33776598 -0.50155894 -0.79646266 |
| 7744 | | Axis point 46.76792849 22.60068617 0.00000000 |
| 7745 | | Rotation angle (degrees) 165.48857405 |
| 7746 | | Shift along axis -202.99544847 |
| 7747 | | |
| 7748 | | |
| 7749 | | > view matrix models |
| 7750 | | > #4,-0.84032,0.29691,0.45354,106.01,0.23148,-0.56,0.7955,107.46,0.49018,0.77346,0.40186,206.42 |
| 7751 | | |
| 7752 | | > fitmap #4 inMap #1 |
| 7753 | | |
| 7754 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7755 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7756 | | average map value = 0.08443, steps = 84 |
| 7757 | | shifted from previous position = 2.79 |
| 7758 | | rotated from previous position = 6.29 degrees |
| 7759 | | atoms outside contour = 1619, contour level = 0.062298 |
| 7760 | | |
| 7761 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7762 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7763 | | Matrix rotation and translation |
| 7764 | | -0.80886279 0.52072469 0.27310582 137.56760199 |
| 7765 | | 0.05754983 -0.39212830 0.91810861 127.92262199 |
| 7766 | | 0.58517434 0.75834108 0.28721037 118.56117655 |
| 7767 | | Axis -0.27503506 -0.53721671 -0.79734179 |
| 7768 | | Axis point 50.18705498 16.36413113 0.00000000 |
| 7769 | | Rotation angle (degrees) 163.11513830 |
| 7770 | | Shift along axis -201.09186378 |
| 7771 | | |
| 7772 | | |
| 7773 | | > view matrix models |
| 7774 | | > #4,-0.84032,0.29691,0.45354,111.14,0.23148,-0.56,0.7955,105.41,0.49018,0.77346,0.40186,203.37 |
| 7775 | | |
| 7776 | | > fitmap #4 inMap #1 |
| 7777 | | |
| 7778 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7779 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7780 | | average map value = 0.07993, steps = 68 |
| 7781 | | shifted from previous position = 2.35 |
| 7782 | | rotated from previous position = 6.84 degrees |
| 7783 | | atoms outside contour = 1661, contour level = 0.062298 |
| 7784 | | |
| 7785 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7786 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7787 | | Matrix rotation and translation |
| 7788 | | -0.74370422 0.53287508 0.40366842 138.06396835 |
| 7789 | | 0.13358508 -0.47319633 0.87076992 128.84795765 |
| 7790 | | 0.65502600 0.70151934 0.28073395 115.17825537 |
| 7791 | | Axis -0.33765209 -0.50145420 -0.79657690 |
| 7792 | | Axis point 46.78450718 22.61332234 0.00000000 |
| 7793 | | Rotation angle (degrees) 165.48528389 |
| 7794 | | Shift along axis -202.97727443 |
| 7795 | | |
| 7796 | | |
| 7797 | | > ui mousemode right translate |
| 7798 | | |
| 7799 | | > ui mousemode right "rotate selected models" |
| 7800 | | |
| 7801 | | > view matrix models |
| 7802 | | > #4,0.36371,0.8509,-0.37905,108.57,0.026805,0.39719,0.91734,102.99,0.93113,-0.34381,0.12165,206.02 |
| 7803 | | |
| 7804 | | > fitmap #4 inMap #1 |
| 7805 | | |
| 7806 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7807 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7808 | | average map value = 0.07995, steps = 264 |
| 7809 | | shifted from previous position = 2.27 |
| 7810 | | rotated from previous position = 10.4 degrees |
| 7811 | | atoms outside contour = 1659, contour level = 0.062298 |
| 7812 | | |
| 7813 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7814 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7815 | | Matrix rotation and translation |
| 7816 | | 0.49023828 0.55068246 -0.67558512 138.48163449 |
| 7817 | | 0.19117552 0.68830502 0.69977719 126.02354749 |
| 7818 | | 0.85036365 -0.47221291 0.23215647 118.74840251 |
| 7819 | | Axis -0.59875535 -0.77958849 -0.18366768 |
| 7820 | | Axis point -43.50708934 0.00000000 57.91792975 |
| 7821 | | Rotation angle (degrees) 78.15001824 |
| 7822 | | Shift along axis -202.97336993 |
| 7823 | | |
| 7824 | | |
| 7825 | | > view matrix models |
| 7826 | | > #4,0.8285,0.36204,-0.4272,108.97,0.12008,0.63028,0.76702,104.55,0.54696,-0.68678,0.47872,208.12 |
| 7827 | | |
| 7828 | | > fitmap #4 inMap #1 |
| 7829 | | |
| 7830 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7831 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7832 | | average map value = 0.0814, steps = 68 |
| 7833 | | shifted from previous position = 3.17 |
| 7834 | | rotated from previous position = 7.09 degrees |
| 7835 | | atoms outside contour = 1664, contour level = 0.062298 |
| 7836 | | |
| 7837 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7838 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7839 | | Matrix rotation and translation |
| 7840 | | 0.83934781 0.01369316 -0.54342227 139.39700683 |
| 7841 | | 0.45494515 0.52945690 0.71603094 123.79328512 |
| 7842 | | 0.29752339 -0.84822632 0.43816885 123.03013794 |
| 7843 | | Axis -0.85479895 -0.45954044 0.24112513 |
| 7844 | | Axis point 0.00000000 166.48009783 30.45922158 |
| 7845 | | Rotation angle (degrees) 66.20366465 |
| 7846 | | Shift along axis -146.37877795 |
| 7847 | | |
| 7848 | | |
| 7849 | | > view matrix models |
| 7850 | | > #4,0.96803,0.20591,0.14327,107.15,-0.173,0.13443,0.9757,104.01,0.18164,-0.96929,0.16576,212.95 |
| 7851 | | |
| 7852 | | > fitmap #4 inMap #1 |
| 7853 | | |
| 7854 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7855 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7856 | | average map value = 0.08069, steps = 88 |
| 7857 | | shifted from previous position = 0.938 |
| 7858 | | rotated from previous position = 6.51 degrees |
| 7859 | | atoms outside contour = 1657, contour level = 0.062298 |
| 7860 | | |
| 7861 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7862 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7863 | | Matrix rotation and translation |
| 7864 | | 0.99015363 -0.00355883 -0.13993974 137.75492023 |
| 7865 | | 0.13891589 0.14829400 0.97913802 124.51136192 |
| 7866 | | 0.01726764 -0.98893692 0.14732822 124.36330569 |
| 7867 | | Axis -0.99423948 -0.07941861 0.07197591 |
| 7868 | | Axis point 0.00000000 134.73710811 1.22226746 |
| 7869 | | Rotation angle (degrees) 81.78500770 |
| 7870 | | Shift along axis -137.89873798 |
| 7871 | | |
| 7872 | | |
| 7873 | | > view matrix models |
| 7874 | | > #4,0.64637,0.60946,0.45909,105.94,-0.6428,0.11076,0.75799,105.59,0.41111,-0.78504,0.46335,210.27 |
| 7875 | | |
| 7876 | | > fitmap #4 inMap #1 |
| 7877 | | |
| 7878 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7879 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7880 | | average map value = 0.078, steps = 84 |
| 7881 | | shifted from previous position = 2.12 |
| 7882 | | rotated from previous position = 7.1 degrees |
| 7883 | | atoms outside contour = 1701, contour level = 0.062298 |
| 7884 | | |
| 7885 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7886 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7887 | | Matrix rotation and translation |
| 7888 | | 0.85683740 0.30473744 0.41589032 134.57914956 |
| 7889 | | -0.48633946 0.20989002 0.84818636 124.82449075 |
| 7890 | | 0.17118291 -0.92902168 0.32804746 122.37697497 |
| 7891 | | Axis -0.90643768 0.12480925 -0.40347663 |
| 7892 | | Axis point 0.00000000 111.77989553 -65.96361672 |
| 7893 | | Rotation angle (degrees) 78.61577502 |
| 7894 | | Shift along axis -155.78460918 |
| 7895 | | |
| 7896 | | |
| 7897 | | > view matrix models |
| 7898 | | > #4,0.50594,0.86058,-0.058527,107.07,0.3388,-0.13586,0.931,103.07,0.79325,-0.49086,-0.3603,210.68 |
| 7899 | | |
| 7900 | | > fitmap #4 inMap #1 |
| 7901 | | |
| 7902 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7903 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7904 | | average map value = 0.07999, steps = 80 |
| 7905 | | shifted from previous position = 2.13 |
| 7906 | | rotated from previous position = 10.4 degrees |
| 7907 | | atoms outside contour = 1649, contour level = 0.062298 |
| 7908 | | |
| 7909 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7910 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7911 | | Matrix rotation and translation |
| 7912 | | 0.50879637 0.74596474 -0.42972417 137.84016461 |
| 7913 | | 0.67388366 -0.03447766 0.73803259 122.18277623 |
| 7914 | | 0.53573040 -0.66509240 -0.52023556 123.02440997 |
| 7915 | | Axis -0.82308412 -0.56634322 -0.04228333 |
| 7916 | | Axis point -0.00000000 52.79517673 52.60216134 |
| 7917 | | Rotation angle (degrees) 121.53090683 |
| 7918 | | Shift along axis -187.85331954 |
| 7919 | | |
| 7920 | | |
| 7921 | | > fitmap #4 inMap #1 |
| 7922 | | |
| 7923 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7924 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7925 | | average map value = 0.07999, steps = 40 |
| 7926 | | shifted from previous position = 0.00455 |
| 7927 | | rotated from previous position = 0.0116 degrees |
| 7928 | | atoms outside contour = 1648, contour level = 0.062298 |
| 7929 | | |
| 7930 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7931 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7932 | | Matrix rotation and translation |
| 7933 | | 0.50881481 0.74586993 -0.42986687 137.84303755 |
| 7934 | | 0.67398602 -0.03448130 0.73793895 122.18085492 |
| 7935 | | 0.53558410 -0.66519853 -0.52025050 123.02832664 |
| 7936 | | Axis -0.82309149 -0.56634114 -0.04216767 |
| 7937 | | Axis point 0.00000000 52.80236292 52.61201526 |
| 7938 | | Rotation angle (degrees) 121.53091158 |
| 7939 | | Shift along axis -187.84129383 |
| 7940 | | |
| 7941 | | |
| 7942 | | > ui mousemode right translate |
| 7943 | | |
| 7944 | | > ui mousemode right "translate selected models" |
| 7945 | | |
| 7946 | | > view matrix models |
| 7947 | | > #4,0.50865,0.85494,-0.10177,109.38,0.49061,-0.19068,0.85026,97.899,0.70752,-0.48241,-0.51643,210.79 |
| 7948 | | |
| 7949 | | > fitmap #4 inMap #1 |
| 7950 | | |
| 7951 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7952 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7953 | | average map value = 0.07752, steps = 80 |
| 7954 | | shifted from previous position = 2.88 |
| 7955 | | rotated from previous position = 12.4 degrees |
| 7956 | | atoms outside contour = 1697, contour level = 0.062298 |
| 7957 | | |
| 7958 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7959 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7960 | | Matrix rotation and translation |
| 7961 | | 0.64783118 0.69910799 -0.30259343 137.74189361 |
| 7962 | | 0.51206407 -0.10554737 0.85243776 119.78411048 |
| 7963 | | 0.56400811 -0.70718298 -0.42636496 122.76360187 |
| 7964 | | Axis -0.86935861 -0.48305815 -0.10426140 |
| 7965 | | Axis point 0.00000000 58.44083075 43.17471542 |
| 7966 | | Rotation angle (degrees) 116.23415051 |
| 7967 | | Shift along axis -190.40929611 |
| 7968 | | |
| 7969 | | |
| 7970 | | > view matrix models |
| 7971 | | > #4,0.50865,0.85494,-0.10177,116.31,0.49061,-0.19068,0.85026,100.94,0.70752,-0.48241,-0.51643,206.05 |
| 7972 | | |
| 7973 | | > fitmap #4 inMap #1 |
| 7974 | | |
| 7975 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 7976 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 7977 | | average map value = 0.07584, steps = 104 |
| 7978 | | shifted from previous position = 2.77 |
| 7979 | | rotated from previous position = 5.83 degrees |
| 7980 | | atoms outside contour = 1761, contour level = 0.062298 |
| 7981 | | |
| 7982 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 7983 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 7984 | | Matrix rotation and translation |
| 7985 | | 0.48559029 0.79633897 -0.36061935 143.19250126 |
| 7986 | | 0.68500286 -0.09032858 0.72291897 124.25086662 |
| 7987 | | 0.54311431 -0.59806772 -0.58935715 118.06468361 |
| 7988 | | Axis -0.82334659 -0.56328049 -0.06939374 |
| 7989 | | Axis point 0.00000000 45.00768663 48.78730164 |
| 7990 | | Rotation angle (degrees) 126.65874737 |
| 7991 | | Shift along axis -196.07809580 |
| 7992 | | |
| 7993 | | |
| 7994 | | > view matrix models |
| 7995 | | > #4,0.50865,0.85494,-0.10177,113.03,0.49061,-0.19068,0.85026,99.225,0.70752,-0.48241,-0.51643,208.43 |
| 7996 | | |
| 7997 | | > fitmap #4 inMap #1 |
| 7998 | | |
| 7999 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8000 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8001 | | average map value = 0.07667, steps = 88 |
| 8002 | | shifted from previous position = 4.35 |
| 8003 | | rotated from previous position = 8.69 degrees |
| 8004 | | atoms outside contour = 1733, contour level = 0.062298 |
| 8005 | | |
| 8006 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8007 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8008 | | Matrix rotation and translation |
| 8009 | | 0.60581275 0.64579619 -0.46469149 143.47674714 |
| 8010 | | 0.62693096 -0.02788068 0.77857577 123.54940062 |
| 8011 | | 0.48984536 -0.76300062 -0.42176010 123.84430944 |
| 8012 | | Axis -0.85016294 -0.52641689 -0.01040397 |
| 8013 | | Axis point -0.00000000 63.06117273 51.88601745 |
| 8014 | | Rotation angle (degrees) 114.95548618 |
| 8015 | | Shift along axis -188.30557652 |
| 8016 | | |
| 8017 | | |
| 8018 | | > ui mousemode right "rotate selected models" |
| 8019 | | |
| 8020 | | > view matrix models |
| 8021 | | > #4,-0.22563,0.97413,-0.012666,114.49,0.48353,0.12326,0.8666,98.329,0.84575,0.1894,-0.49883,206.14 |
| 8022 | | |
| 8023 | | > fitmap #4 inMap #1 |
| 8024 | | |
| 8025 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8026 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8027 | | average map value = 0.07485, steps = 68 |
| 8028 | | shifted from previous position = 3.38 |
| 8029 | | rotated from previous position = 4.41 degrees |
| 8030 | | atoms outside contour = 1745, contour level = 0.062298 |
| 8031 | | |
| 8032 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8033 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8034 | | Matrix rotation and translation |
| 8035 | | -0.07417279 0.93100210 -0.35739822 142.03046255 |
| 8036 | | 0.49969558 0.34484534 0.79459802 123.07391469 |
| 8037 | | 0.86301954 -0.11965276 -0.49079578 117.24873021 |
| 8038 | | Axis -0.57692067 -0.77012156 -0.27216783 |
| 8039 | | Axis point 5.59665559 0.00000000 43.79903907 |
| 8040 | | Rotation angle (degrees) 127.59395838 |
| 8041 | | Shift along axis -208.63351681 |
| 8042 | | |
| 8043 | | |
| 8044 | | > ui mousemode right translate |
| 8045 | | |
| 8046 | | > ui mousemode right "translate selected models" |
| 8047 | | |
| 8048 | | > view matrix models |
| 8049 | | > #4,-0.22563,0.97413,-0.012666,113.06,0.48353,0.12326,0.8666,104.75,0.84575,0.1894,-0.49883,215.57 |
| 8050 | | |
| 8051 | | > fitmap #4 inMap #1 |
| 8052 | | |
| 8053 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8054 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8055 | | average map value = 0.08272, steps = 108 |
| 8056 | | shifted from previous position = 6.67 |
| 8057 | | rotated from previous position = 8.44 degrees |
| 8058 | | atoms outside contour = 1568, contour level = 0.062298 |
| 8059 | | |
| 8060 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8061 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8062 | | Matrix rotation and translation |
| 8063 | | -0.24683665 0.93291865 -0.26217257 138.92414876 |
| 8064 | | 0.56800482 0.35848279 0.74085127 124.20029595 |
| 8065 | | 0.78513833 0.03395397 -0.61838898 123.80334903 |
| 8066 | | Axis -0.53748663 -0.79631879 -0.27746082 |
| 8067 | | Axis point 11.97798228 0.00000000 46.66189810 |
| 8068 | | Rotation angle (degrees) 138.88327080 |
| 8069 | | Shift along axis -207.92348114 |
| 8070 | | |
| 8071 | | |
| 8072 | | > view matrix models |
| 8073 | | > #4,-0.28781,0.9543,0.080477,107.85,0.57023,0.10325,0.81497,105.21,0.76941,0.28045,-0.57389,214.78 |
| 8074 | | |
| 8075 | | > fitmap #4 inMap #1 |
| 8076 | | |
| 8077 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8078 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8079 | | average map value = 0.08272, steps = 100 |
| 8080 | | shifted from previous position = 4.14 |
| 8081 | | rotated from previous position = 0.0328 degrees |
| 8082 | | atoms outside contour = 1565, contour level = 0.062298 |
| 8083 | | |
| 8084 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8085 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8086 | | Matrix rotation and translation |
| 8087 | | -0.24706845 0.93272116 -0.26265648 138.93496345 |
| 8088 | | 0.56787025 0.35900625 0.74070094 124.18597542 |
| 8089 | | 0.78516276 0.03384903 -0.61836372 123.79954229 |
| 8090 | | Axis -0.53730382 -0.79648547 -0.27733643 |
| 8091 | | Axis point 12.00185790 -0.00000000 46.69260401 |
| 8092 | | Rotation angle (degrees) 138.86946612 |
| 8093 | | Shift along axis -207.89673508 |
| 8094 | | |
| 8095 | | |
| 8096 | | > ui mousemode right "rotate selected models" |
| 8097 | | |
| 8098 | | > view matrix models |
| 8099 | | > #4,-0.37927,-0.035748,-0.9246,114.05,0.39821,0.89567,-0.19798,103.81,0.83522,-0.44327,-0.32546,212.63 |
| 8100 | | |
| 8101 | | > fitmap #4 inMap #1 |
| 8102 | | |
| 8103 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8104 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8105 | | average map value = 0.07817, steps = 92 |
| 8106 | | shifted from previous position = 4.47 |
| 8107 | | rotated from previous position = 13.2 degrees |
| 8108 | | atoms outside contour = 1637, contour level = 0.062298 |
| 8109 | | |
| 8110 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8111 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8112 | | Matrix rotation and translation |
| 8113 | | -0.38711854 -0.34391833 -0.85548782 142.56709396 |
| 8114 | | 0.53025552 0.67600415 -0.51171034 124.24837588 |
| 8115 | | 0.75429989 -0.65171970 -0.07932915 120.99873107 |
| 8116 | | Axis -0.07620920 -0.87623161 0.47582594 |
| 8117 | | Axis point 9.31054990 0.00000000 146.01613114 |
| 8118 | | Rotation angle (degrees) 113.27980601 |
| 8119 | | Shift along axis -62.16094232 |
| 8120 | | |
| 8121 | | |
| 8122 | | > view matrix models |
| 8123 | | > #4,-0.63704,0.75489,0.15597,109.57,0.69762,0.47853,0.53323,102.11,0.32789,0.4485,-0.83146,212.96 |
| 8124 | | |
| 8125 | | > fitmap #4 inMap #1 |
| 8126 | | |
| 8127 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8128 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8129 | | average map value = 0.08242, steps = 132 |
| 8130 | | shifted from previous position = 7.89 |
| 8131 | | rotated from previous position = 13.8 degrees |
| 8132 | | atoms outside contour = 1610, contour level = 0.062298 |
| 8133 | | |
| 8134 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8135 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8136 | | Matrix rotation and translation |
| 8137 | | -0.80492058 0.59138987 -0.04858877 133.51408750 |
| 8138 | | 0.55061130 0.77491827 0.31036892 121.22956198 |
| 8139 | | 0.22120136 0.22306881 -0.94937361 124.95435726 |
| 8140 | | Axis -0.30473347 -0.94174087 -0.14234340 |
| 8141 | | Axis point 43.30621598 0.00000000 56.40768914 |
| 8142 | | Rotation angle (degrees) 171.76461883 |
| 8143 | | Shift along axis -172.63947344 |
| 8144 | | |
| 8145 | | |
| 8146 | | > ui mousemode right translate |
| 8147 | | |
| 8148 | | > select add #1 |
| 8149 | | |
| 8150 | | 26 atoms, 3 residues, 4 models selected |
| 8151 | | |
| 8152 | | > select add #4 |
| 8153 | | |
| 8154 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 8155 | | |
| 8156 | | > ui mousemode right "translate selected models" |
| 8157 | | |
| 8158 | | > view matrix models |
| 8159 | | > #1,0.94023,0.23824,-0.24334,-22.263,-0.25809,0.96468,-0.052749,24.87,0.22218,0.1124,0.96851,46.418,#4,-0.63704,0.75489,0.15597,109.14,0.69762,0.47853,0.53323,101.67,0.32789,0.4485,-0.83146,212.62 |
| 8160 | | |
| 8161 | | > select subtract #4 |
| 8162 | | |
| 8163 | | 5 models selected |
| 8164 | | |
| 8165 | | > view matrix models |
| 8166 | | > #1,0.94023,0.23824,-0.24334,-24.685,-0.25809,0.96468,-0.052749,24.447,0.22218,0.1124,0.96851,46.14 |
| 8167 | | |
| 8168 | | > view matrix models |
| 8169 | | > #1,0.94023,0.23824,-0.24334,-26.509,-0.25809,0.96468,-0.052749,24.042,0.22218,0.1124,0.96851,45.86 |
| 8170 | | |
| 8171 | | > fitmap #4 inMap #1 |
| 8172 | | |
| 8173 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8174 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8175 | | average map value = 0.07619, steps = 76 |
| 8176 | | shifted from previous position = 2.43 |
| 8177 | | rotated from previous position = 6.13 degrees |
| 8178 | | atoms outside contour = 1675, contour level = 0.062298 |
| 8179 | | |
| 8180 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8181 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8182 | | Matrix rotation and translation |
| 8183 | | -0.74700975 0.65097173 -0.13495272 142.50133586 |
| 8184 | | 0.50316179 0.68627603 0.52521750 124.87708918 |
| 8185 | | 0.43451656 0.32443954 -0.84019899 124.63337753 |
| 8186 | | Axis -0.32297333 -0.91605370 -0.23776847 |
| 8187 | | Axis point 42.32639960 0.00000000 53.16625710 |
| 8188 | | Rotation angle (degrees) 161.89089613 |
| 8189 | | Shift along axis -190.05213816 |
| 8190 | | |
| 8191 | | |
| 8192 | | > view matrix models |
| 8193 | | > #1,0.94023,0.23824,-0.24334,-30.613,-0.25809,0.96468,-0.052749,24.476,0.22218,0.1124,0.96851,46.321 |
| 8194 | | |
| 8195 | | > fitmap #4 inMap #1 |
| 8196 | | |
| 8197 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8198 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8199 | | average map value = 0.07815, steps = 92 |
| 8200 | | shifted from previous position = 2.7 |
| 8201 | | rotated from previous position = 9.54 degrees |
| 8202 | | atoms outside contour = 1704, contour level = 0.062298 |
| 8203 | | |
| 8204 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8205 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8206 | | Matrix rotation and translation |
| 8207 | | -0.63727758 0.76889203 -0.05179127 146.02459231 |
| 8208 | | 0.67143521 0.58697359 0.45236795 124.71195358 |
| 8209 | | 0.37822221 0.25350947 -0.89032629 124.07084691 |
| 8210 | | Axis -0.41112961 -0.88903063 -0.20148693 |
| 8211 | | Axis point 38.33593651 0.00000000 52.42362888 |
| 8212 | | Rotation angle (degrees) 166.00459856 |
| 8213 | | Shift along axis -195.90643459 |
| 8214 | | |
| 8215 | | |
| 8216 | | > volume #1 color #dfdfdfe0 |
| 8217 | | |
| 8218 | | > view matrix models |
| 8219 | | > #1,0.94023,0.23824,-0.24334,-30.446,-0.25809,0.96468,-0.052749,24.693,0.22218,0.1124,0.96851,47.193 |
| 8220 | | |
| 8221 | | > fitmap #4 inMap #1 |
| 8222 | | |
| 8223 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8224 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8225 | | average map value = 0.07815, steps = 100 |
| 8226 | | shifted from previous position = 2.72 |
| 8227 | | rotated from previous position = 9.54 degrees |
| 8228 | | atoms outside contour = 1705, contour level = 0.062298 |
| 8229 | | |
| 8230 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8231 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8232 | | Matrix rotation and translation |
| 8233 | | -0.63730512 0.76886657 -0.05183030 146.02656605 |
| 8234 | | 0.67138823 0.58700321 0.45239925 124.71063263 |
| 8235 | | 0.37825921 0.25351811 -0.89030811 124.07161473 |
| 8236 | | Axis -0.41110742 -0.88903848 -0.20149758 |
| 8237 | | Axis point 38.33815569 0.00000000 52.42475154 |
| 8238 | | Rotation angle (degrees) 166.00219979 |
| 8239 | | Shift along axis -195.90528635 |
| 8240 | | |
| 8241 | | |
| 8242 | | > select add #4 |
| 8243 | | |
| 8244 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 5 models selected |
| 8245 | | |
| 8246 | | > select subtract #1 |
| 8247 | | |
| 8248 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 8249 | | |
| 8250 | | > view matrix models |
| 8251 | | > #4,-0.63704,0.75489,0.15597,109.48,0.69762,0.47853,0.53323,101.57,0.32789,0.4485,-0.83146,213.61 |
| 8252 | | |
| 8253 | | > view matrix models |
| 8254 | | > #4,-0.63704,0.75489,0.15597,108.13,0.69762,0.47853,0.53323,106.05,0.32789,0.4485,-0.83146,215.67 |
| 8255 | | |
| 8256 | | > fitmap #4 inMap #1 |
| 8257 | | |
| 8258 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8259 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8260 | | average map value = 0.07874, steps = 112 |
| 8261 | | shifted from previous position = 3.34 |
| 8262 | | rotated from previous position = 16 degrees |
| 8263 | | atoms outside contour = 1714, contour level = 0.062298 |
| 8264 | | |
| 8265 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8266 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8267 | | Matrix rotation and translation |
| 8268 | | -0.63363531 0.68964011 -0.35057498 144.39435052 |
| 8269 | | 0.63624813 0.72232923 0.27097749 128.44346256 |
| 8270 | | 0.44010750 -0.05135177 -0.89647553 125.58496785 |
| 8271 | | Axis -0.37676127 -0.92420569 -0.06240833 |
| 8272 | | Axis point 32.12409203 -0.00000000 67.72054923 |
| 8273 | | Rotation angle (degrees) 154.67430502 |
| 8274 | | Shift along axis -180.94792438 |
| 8275 | | |
| 8276 | | |
| 8277 | | > view matrix models |
| 8278 | | > #4,-0.63704,0.75489,0.15597,108.33,0.69762,0.47853,0.53323,103.3,0.32789,0.4485,-0.83146,212.31 |
| 8279 | | |
| 8280 | | > fitmap #4 inMap #1 |
| 8281 | | |
| 8282 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8283 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8284 | | average map value = 0.07522, steps = 116 |
| 8285 | | shifted from previous position = 2.82 |
| 8286 | | rotated from previous position = 7.04 degrees |
| 8287 | | atoms outside contour = 1753, contour level = 0.062298 |
| 8288 | | |
| 8289 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8290 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8291 | | Matrix rotation and translation |
| 8292 | | -0.61617915 0.76284196 -0.19594743 144.43881579 |
| 8293 | | 0.60808946 0.61889077 0.49719354 127.01247318 |
| 8294 | | 0.50055016 0.18720673 -0.84522375 123.70505825 |
| 8295 | | Axis -0.39848506 -0.89534093 -0.19893284 |
| 8296 | | Axis point 34.37487475 0.00000000 55.24718221 |
| 8297 | | Rotation angle (degrees) 157.11040627 |
| 8298 | | Shift along axis -195.88517512 |
| 8299 | | |
| 8300 | | |
| 8301 | | > ui mousemode right translate |
| 8302 | | |
| 8303 | | > select add #1 |
| 8304 | | |
| 8305 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 8306 | | |
| 8307 | | > select subtract #4 |
| 8308 | | |
| 8309 | | 5 models selected |
| 8310 | | |
| 8311 | | > fitmap #4 inMap #1 |
| 8312 | | |
| 8313 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8314 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8315 | | average map value = 0.07522, steps = 116 |
| 8316 | | shifted from previous position = 2.82 |
| 8317 | | rotated from previous position = 7.04 degrees |
| 8318 | | atoms outside contour = 1753, contour level = 0.062298 |
| 8319 | | |
| 8320 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8321 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8322 | | Matrix rotation and translation |
| 8323 | | -0.61617915 0.76284196 -0.19594743 144.43881579 |
| 8324 | | 0.60808946 0.61889077 0.49719354 127.01247318 |
| 8325 | | 0.50055016 0.18720673 -0.84522375 123.70505825 |
| 8326 | | Axis -0.39848506 -0.89534093 -0.19893284 |
| 8327 | | Axis point 34.37487475 0.00000000 55.24718221 |
| 8328 | | Rotation angle (degrees) 157.11040627 |
| 8329 | | Shift along axis -195.88517512 |
| 8330 | | |
| 8331 | | |
| 8332 | | > ui mousemode right "translate selected models" |
| 8333 | | |
| 8334 | | > view matrix models |
| 8335 | | > #1,0.94023,0.23824,-0.24334,-33.106,-0.25809,0.96468,-0.052749,29.003,0.22218,0.1124,0.96851,44.659 |
| 8336 | | |
| 8337 | | > fitmap #4 inMap #1 |
| 8338 | | |
| 8339 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8340 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8341 | | average map value = 0.07815, steps = 128 |
| 8342 | | shifted from previous position = 4.48 |
| 8343 | | rotated from previous position = 9.54 degrees |
| 8344 | | atoms outside contour = 1703, contour level = 0.062298 |
| 8345 | | |
| 8346 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8347 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8348 | | Matrix rotation and translation |
| 8349 | | -0.63726856 0.76888520 -0.05200328 146.02072935 |
| 8350 | | 0.67148720 0.58712062 0.45209989 124.71038770 |
| 8351 | | 0.37814511 0.25318951 -0.89045008 124.08870297 |
| 8352 | | Axis -0.41112691 -0.88907163 -0.20131144 |
| 8353 | | Axis point 38.33071030 0.00000000 52.44696838 |
| 8354 | | Rotation angle (degrees) 166.00077703 |
| 8355 | | Shift along axis -195.88999511 |
| 8356 | | |
| 8357 | | |
| 8358 | | > ui mousemode right "rotate selected models" |
| 8359 | | |
| 8360 | | > view matrix models |
| 8361 | | > #1,-0.20401,0.74731,-0.63238,85.812,-0.31775,0.56045,0.76481,-3.846,0.92597,0.35696,0.12312,22.068 |
| 8362 | | |
| 8363 | | > fitmap #4 inMap #1 |
| 8364 | | |
| 8365 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8366 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8367 | | average map value = 0.07278, steps = 188 |
| 8368 | | shifted from previous position = 23.5 |
| 8369 | | rotated from previous position = 27.3 degrees |
| 8370 | | atoms outside contour = 1787, contour level = 0.062298 |
| 8371 | | |
| 8372 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8373 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8374 | | Matrix rotation and translation |
| 8375 | | 0.50475599 -0.00395896 -0.86325298 137.60557385 |
| 8376 | | 0.35006041 0.91502019 0.20048880 130.85195779 |
| 8377 | | 0.78910018 -0.40338862 0.46324780 111.14964220 |
| 8378 | | Axis -0.33651370 -0.92078201 0.19727905 |
| 8379 | | Axis point -77.00713179 0.00000000 147.11088191 |
| 8380 | | Rotation angle (degrees) 63.79960817 |
| 8381 | | Shift along axis -144.86479231 |
| 8382 | | |
| 8383 | | |
| 8384 | | > select add #4 |
| 8385 | | |
| 8386 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 5 models selected |
| 8387 | | |
| 8388 | | > select subtract #1 |
| 8389 | | |
| 8390 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 8391 | | |
| 8392 | | > view matrix models |
| 8393 | | > #4,-0.8982,0.41794,0.13623,110.04,0.32708,0.42838,0.84233,103.61,0.29368,0.80114,-0.52147,210.57 |
| 8394 | | |
| 8395 | | > fitmap #4 inMap #1 |
| 8396 | | |
| 8397 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8398 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8399 | | average map value = 0.06602, steps = 164 |
| 8400 | | shifted from previous position = 18.5 |
| 8401 | | rotated from previous position = 21.5 degrees |
| 8402 | | atoms outside contour = 1875, contour level = 0.062298 |
| 8403 | | |
| 8404 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8405 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8406 | | Matrix rotation and translation |
| 8407 | | 0.65646254 0.33751741 -0.67463985 137.75057783 |
| 8408 | | -0.29019209 0.93849061 0.18714680 131.98699941 |
| 8409 | | 0.69630847 0.07292028 0.71402881 102.30230863 |
| 8410 | | Axis -0.07553966 -0.90662814 -0.41511346 |
| 8411 | | Axis point 26.35100397 0.00000000 171.44662118 |
| 8412 | | Rotation angle (degrees) 49.11893518 |
| 8413 | | Shift along axis -172.53582428 |
| 8414 | | |
| 8415 | | |
| 8416 | | > ui mousemode right translate |
| 8417 | | |
| 8418 | | > ui mousemode right "translate selected models" |
| 8419 | | |
| 8420 | | > view matrix models |
| 8421 | | > #4,-0.8982,0.41794,0.13623,78.181,0.32708,0.42838,0.84233,99.003,0.29368,0.80114,-0.52147,215.65 |
| 8422 | | |
| 8423 | | > fitmap #4 inMap #1 |
| 8424 | | |
| 8425 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8426 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8427 | | average map value = 0.07644, steps = 176 |
| 8428 | | shifted from previous position = 8.55 |
| 8429 | | rotated from previous position = 15.6 degrees |
| 8430 | | atoms outside contour = 1738, contour level = 0.062298 |
| 8431 | | |
| 8432 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8433 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8434 | | Matrix rotation and translation |
| 8435 | | 0.55863107 0.37062938 -0.74200081 144.22225472 |
| 8436 | | -0.22873939 0.92875617 0.29170236 127.39580241 |
| 8437 | | 0.79725129 0.00677081 0.60360959 111.39308122 |
| 8438 | | Axis -0.16998420 -0.91828560 -0.35757087 |
| 8439 | | Axis point 13.57708311 0.00000000 144.75206626 |
| 8440 | | Rotation angle (degrees) 56.94127012 |
| 8441 | | Shift along axis -181.33215681 |
| 8442 | | |
| 8443 | | |
| 8444 | | > fitmap #4 inMap #1 |
| 8445 | | |
| 8446 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8447 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8448 | | average map value = 0.07645, steps = 48 |
| 8449 | | shifted from previous position = 0.014 |
| 8450 | | rotated from previous position = 0.0298 degrees |
| 8451 | | atoms outside contour = 1739, contour level = 0.062298 |
| 8452 | | |
| 8453 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8454 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8455 | | Matrix rotation and translation |
| 8456 | | 0.55884643 0.37043010 -0.74193814 144.22720697 |
| 8457 | | -0.22827925 0.92883899 0.29179909 127.38212909 |
| 8458 | | 0.79723224 0.00629821 0.60363986 111.39825426 |
| 8459 | | Axis -0.17034558 -0.91835400 -0.35722304 |
| 8460 | | Axis point 13.48504290 0.00000000 144.73850585 |
| 8461 | | Rotation angle (degrees) 56.93004185 |
| 8462 | | Shift along axis -181.34437966 |
| 8463 | | |
| 8464 | | |
| 8465 | | > view matrix models |
| 8466 | | > #4,-0.78876,0.61458,-0.012303,80.66,0.30422,0.40768,0.86096,114.02,0.53414,0.67534,-0.50853,212.55 |
| 8467 | | |
| 8468 | | > fitmap #4 inMap #1 |
| 8469 | | |
| 8470 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8471 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8472 | | average map value = 0.07688, steps = 116 |
| 8473 | | shifted from previous position = 2.27 |
| 8474 | | rotated from previous position = 5.49 degrees |
| 8475 | | atoms outside contour = 1762, contour level = 0.062298 |
| 8476 | | |
| 8477 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8478 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8479 | | Matrix rotation and translation |
| 8480 | | 0.62528504 0.38988892 -0.67602163 138.16152314 |
| 8481 | | -0.24536590 0.92054408 0.30396410 130.38187799 |
| 8482 | | 0.74081994 -0.02419155 0.67126789 115.19655167 |
| 8483 | | Axis -0.20677300 -0.89276106 -0.40027818 |
| 8484 | | Axis point 10.03193306 0.00000000 140.36904725 |
| 8485 | | Rotation angle (degrees) 52.51537558 |
| 8486 | | Shift along axis -191.07860178 |
| 8487 | | |
| 8488 | | |
| 8489 | | > view matrix models |
| 8490 | | > #4,-0.77941,0.62369,-0.059426,80.841,0.23039,0.37353,0.89855,118.85,0.58262,0.68665,-0.43482,208.35 |
| 8491 | | |
| 8492 | | > fitmap #4 inMap #1 |
| 8493 | | |
| 8494 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8495 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8496 | | average map value = 0.07851, steps = 108 |
| 8497 | | shifted from previous position = 5.08 |
| 8498 | | rotated from previous position = 9.88 degrees |
| 8499 | | atoms outside contour = 1712, contour level = 0.062298 |
| 8500 | | |
| 8501 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8502 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8503 | | Matrix rotation and translation |
| 8504 | | 0.53530919 0.35200089 -0.76781472 139.94666875 |
| 8505 | | -0.30848455 0.92770680 0.21023171 130.75258422 |
| 8506 | | 0.78630869 0.12432001 0.60519681 119.64065722 |
| 8507 | | Axis -0.05081023 -0.91914577 -0.39062689 |
| 8508 | | Axis point 15.36342003 0.00000000 161.45185901 |
| 8509 | | Rotation angle (degrees) 57.71666976 |
| 8510 | | Shift along axis -174.02626581 |
| 8511 | | |
| 8512 | | |
| 8513 | | > view matrix models |
| 8514 | | > #4,-0.83699,0.54286,-0.068965,76.655,0.2584,0.50316,0.82466,117.44,0.48237,0.67241,-0.56142,211.07 |
| 8515 | | |
| 8516 | | > view matrix models |
| 8517 | | > #4,-0.83699,0.54286,-0.068965,74.748,0.2584,0.50316,0.82466,118.57,0.48237,0.67241,-0.56142,209.53 |
| 8518 | | |
| 8519 | | > fitmap #4 inMap #1 |
| 8520 | | |
| 8521 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8522 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8523 | | average map value = 0.08473, steps = 72 |
| 8524 | | shifted from previous position = 4.28 |
| 8525 | | rotated from previous position = 5.02 degrees |
| 8526 | | atoms outside contour = 1584, contour level = 0.062298 |
| 8527 | | |
| 8528 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8529 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8530 | | Matrix rotation and translation |
| 8531 | | 0.53988666 0.26974318 -0.79734623 137.37912652 |
| 8532 | | -0.26144085 0.95414917 0.14576705 125.51626591 |
| 8533 | | 0.80010692 0.12976119 0.58565430 119.78031541 |
| 8534 | | Axis -0.00950733 -0.94887188 -0.31551824 |
| 8535 | | Axis point 0.71427822 0.00000000 169.99696474 |
| 8536 | | Rotation angle (degrees) 57.32690758 |
| 8537 | | Shift along axis -158.19783790 |
| 8538 | | |
| 8539 | | |
| 8540 | | > view matrix models |
| 8541 | | > #4,-0.81149,0.57596,-0.098757,75.709,0.29386,0.54828,0.78296,122.16,0.5051,0.60635,-0.61418,206.64 |
| 8542 | | |
| 8543 | | > fitmap #4 inMap #1 |
| 8544 | | |
| 8545 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8546 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8547 | | average map value = 0.08473, steps = 124 |
| 8548 | | shifted from previous position = 8.01 |
| 8549 | | rotated from previous position = 0.0162 degrees |
| 8550 | | atoms outside contour = 1588, contour level = 0.062298 |
| 8551 | | |
| 8552 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8553 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8554 | | Matrix rotation and translation |
| 8555 | | 0.53991792 0.26988732 -0.79727628 137.37922497 |
| 8556 | | -0.26133093 0.95414154 0.14601393 125.51665682 |
| 8557 | | 0.80012173 0.12951742 0.58568802 119.78273565 |
| 8558 | | Axis -0.00979899 -0.94885987 -0.31554545 |
| 8559 | | Axis point 0.70633190 0.00000000 169.95821649 |
| 8560 | | Rotation angle (degrees) 57.32495554 |
| 8561 | | Shift along axis -158.24079295 |
| 8562 | | |
| 8563 | | |
| 8564 | | > view matrix models |
| 8565 | | > #4,-0.81142,0.57608,-0.098608,80.205,0.29392,0.54805,0.78311,115.56,0.50517,0.60645,-0.61402,211.36 |
| 8566 | | |
| 8567 | | > fitmap #4 inMap #1 |
| 8568 | | |
| 8569 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8570 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8571 | | average map value = 0.08158, steps = 156 |
| 8572 | | shifted from previous position = 3.65 |
| 8573 | | rotated from previous position = 14.4 degrees |
| 8574 | | atoms outside contour = 1647, contour level = 0.062298 |
| 8575 | | |
| 8576 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8577 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8578 | | Matrix rotation and translation |
| 8579 | | 0.31556326 0.28245299 -0.90589190 142.66054840 |
| 8580 | | -0.26560304 0.94280271 0.20144002 129.25072035 |
| 8581 | | 0.91097467 0.17704057 0.37253427 117.91090537 |
| 8582 | | Axis -0.01285613 -0.95731155 -0.28877210 |
| 8583 | | Axis point 18.46457954 0.00000000 141.26482347 |
| 8584 | | Rotation angle (degrees) 71.61201075 |
| 8585 | | Shift along axis -159.61664885 |
| 8586 | | |
| 8587 | | |
| 8588 | | > view matrix models |
| 8589 | | > #4,-0.83895,0.53499,0.099765,81.388,0.4476,0.57404,0.68566,111.45,0.30955,0.61989,-0.72105,217.09 |
| 8590 | | |
| 8591 | | > fitmap #4 inMap #1 |
| 8592 | | |
| 8593 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8594 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8595 | | average map value = 0.08226, steps = 96 |
| 8596 | | shifted from previous position = 4.69 |
| 8597 | | rotated from previous position = 5.19 degrees |
| 8598 | | atoms outside contour = 1600, contour level = 0.062298 |
| 8599 | | |
| 8600 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8601 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8602 | | Matrix rotation and translation |
| 8603 | | 0.32687714 0.31971743 -0.88934363 141.75355964 |
| 8604 | | -0.34833487 0.91554310 0.20110605 127.91092534 |
| 8605 | | 0.87852954 0.24405243 0.41063884 116.47376477 |
| 8606 | | Axis 0.02271846 -0.93519758 -0.35339690 |
| 8607 | | Axis point 26.81534097 0.00000000 143.12030174 |
| 8608 | | Rotation angle (degrees) 70.94173261 |
| 8609 | | Shift along axis -157.56303220 |
| 8610 | | |
| 8611 | | |
| 8612 | | > view matrix models |
| 8613 | | > #4,-0.88256,0.46464,0.072043,82.792,0.37282,0.59818,0.70936,109.62,0.2865,0.65291,-0.70116,216.51 |
| 8614 | | |
| 8615 | | > fitmap #4 inMap #1 |
| 8616 | | |
| 8617 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8618 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8619 | | average map value = 0.08225, steps = 108 |
| 8620 | | shifted from previous position = 5.58 |
| 8621 | | rotated from previous position = 0.022 degrees |
| 8622 | | atoms outside contour = 1599, contour level = 0.062298 |
| 8623 | | |
| 8624 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8625 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8626 | | Matrix rotation and translation |
| 8627 | | 0.32707060 0.31959363 -0.88931700 141.74929753 |
| 8628 | | -0.34800826 0.91567391 0.20107597 127.91067646 |
| 8629 | | 0.87858697 0.24372362 0.41071124 116.49174831 |
| 8630 | | Axis 0.02256207 -0.93528169 -0.35318424 |
| 8631 | | Axis point 26.76151666 0.00000000 143.13901362 |
| 8632 | | Rotation angle (degrees) 70.92970917 |
| 8633 | | Shift along axis -157.57740633 |
| 8634 | | |
| 8635 | | |
| 8636 | | > view matrix models |
| 8637 | | > #4,-0.8824,0.46497,0.071969,83.497,0.37299,0.59804,0.70939,116.23,0.2868,0.6528,-0.70114,215.17 |
| 8638 | | |
| 8639 | | > fitmap #4 inMap #1 |
| 8640 | | |
| 8641 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8642 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8643 | | average map value = 0.08204, steps = 128 |
| 8644 | | shifted from previous position = 4.1 |
| 8645 | | rotated from previous position = 14.2 degrees |
| 8646 | | atoms outside contour = 1665, contour level = 0.062298 |
| 8647 | | |
| 8648 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8649 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8650 | | Matrix rotation and translation |
| 8651 | | 0.18910999 0.51654081 -0.83511856 140.20806433 |
| 8652 | | -0.41609733 0.81248875 0.40831979 130.46892564 |
| 8653 | | 0.88943826 0.27027325 0.36858099 116.20642976 |
| 8654 | | Axis -0.07023685 -0.87743916 -0.47451798 |
| 8655 | | Axis point 43.54818892 0.00000000 110.51123233 |
| 8656 | | Rotation angle (degrees) 79.33362847 |
| 8657 | | Shift along axis -179.46835686 |
| 8658 | | |
| 8659 | | |
| 8660 | | > view matrix models |
| 8661 | | > #4,-0.912,0.33089,0.24243,79.903,0.38696,0.49794,0.77609,110.11,0.13609,0.80161,-0.58216,212.88 |
| 8662 | | |
| 8663 | | > fitmap #4 inMap #1 |
| 8664 | | |
| 8665 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8666 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8667 | | average map value = 0.08171, steps = 84 |
| 8668 | | shifted from previous position = 3.33 |
| 8669 | | rotated from previous position = 9.26 degrees |
| 8670 | | atoms outside contour = 1631, contour level = 0.062298 |
| 8671 | | |
| 8672 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8673 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8674 | | Matrix rotation and translation |
| 8675 | | 0.29520537 0.39935230 -0.86796977 143.63982858 |
| 8676 | | -0.38223816 0.88195136 0.27578213 127.24780423 |
| 8677 | | 0.87564135 0.25035880 0.41300447 117.09211213 |
| 8678 | | Axis -0.01330406 -0.91243410 -0.40900736 |
| 8679 | | Axis point 34.32283368 0.00000000 135.07616999 |
| 8680 | | Rotation angle (degrees) 72.83762915 |
| 8681 | | Shift along axis -165.90776432 |
| 8682 | | |
| 8683 | | |
| 8684 | | > view matrix models |
| 8685 | | > #4,-0.89961,0.4193,0.12199,73.723,0.36168,0.55887,0.74623,115.53,0.24472,0.71544,-0.65442,211.3 |
| 8686 | | |
| 8687 | | > fitmap #4 inMap #1 |
| 8688 | | |
| 8689 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8690 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8691 | | average map value = 0.07943, steps = 92 |
| 8692 | | shifted from previous position = 1.71 |
| 8693 | | rotated from previous position = 2.96 degrees |
| 8694 | | atoms outside contour = 1667, contour level = 0.062298 |
| 8695 | | |
| 8696 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8697 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8698 | | Matrix rotation and translation |
| 8699 | | 0.29059643 0.35339419 -0.88919416 140.80742802 |
| 8700 | | -0.37765853 0.89621216 0.23276125 126.21793529 |
| 8701 | | 0.87916309 0.26817217 0.39389839 121.00055089 |
| 8702 | | Axis 0.01850256 -0.92398438 -0.38198237 |
| 8703 | | Axis point 28.03751532 0.00000000 139.31977576 |
| 8704 | | Rotation angle (degrees) 73.12087985 |
| 8705 | | Shift along axis -160.23817889 |
| 8706 | | |
| 8707 | | |
| 8708 | | > view matrix models |
| 8709 | | > #4,-0.89748,0.42807,0.10626,81.719,0.3684,0.59509,0.71425,110.3,0.24252,0.68016,-0.69178,218.03 |
| 8710 | | |
| 8711 | | > fitmap #4 inMap #1 |
| 8712 | | |
| 8713 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8714 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8715 | | average map value = 0.07795, steps = 112 |
| 8716 | | shifted from previous position = 1.63 |
| 8717 | | rotated from previous position = 8.54 degrees |
| 8718 | | atoms outside contour = 1669, contour level = 0.062298 |
| 8719 | | |
| 8720 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8721 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8722 | | Matrix rotation and translation |
| 8723 | | 0.40927952 0.28652560 -0.86625247 146.32308422 |
| 8724 | | -0.29514688 0.93994295 0.17145134 130.29333602 |
| 8725 | | 0.86335311 0.18550020 0.46926654 115.56222068 |
| 8726 | | Axis 0.00769864 -0.94780724 -0.31875094 |
| 8727 | | Axis point 20.87971081 0.00000000 156.09150235 |
| 8728 | | Rotation angle (degrees) 65.84261528 |
| 8729 | | Shift along axis -159.20204519 |
| 8730 | | |
| 8731 | | |
| 8732 | | > view matrix models |
| 8733 | | > #4,-0.85003,0.52667,0.0080959,75.792,0.36484,0.57762,0.73024,120.11,0.37992,0.62368,-0.68314,212.94 |
| 8734 | | |
| 8735 | | > fitmap #4 inMap #1 |
| 8736 | | |
| 8737 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8738 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8739 | | average map value = 0.08473, steps = 84 |
| 8740 | | shifted from previous position = 6.85 |
| 8741 | | rotated from previous position = 8.57 degrees |
| 8742 | | atoms outside contour = 1584, contour level = 0.062298 |
| 8743 | | |
| 8744 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8745 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8746 | | Matrix rotation and translation |
| 8747 | | 0.53981204 0.26978647 -0.79738210 137.37805762 |
| 8748 | | -0.26154148 0.95412272 0.14575967 125.51919363 |
| 8749 | | 0.80012437 0.12986567 0.58560729 119.77868455 |
| 8750 | | Axis -0.00944035 -0.94885004 -0.31558592 |
| 8751 | | Axis point 0.73504199 0.00000000 169.98923180 |
| 8752 | | Rotation angle (degrees) 57.33194695 |
| 8753 | | Shift along axis -158.19625637 |
| 8754 | | |
| 8755 | | |
| 8756 | | > ui mousemode right translate |
| 8757 | | |
| 8758 | | > ui mousemode right "translate selected models" |
| 8759 | | |
| 8760 | | > view matrix models |
| 8761 | | > #4,-0.81156,0.57587,-0.098725,72.723,0.29384,0.54833,0.78294,122.7,0.505,0.60639,-0.61422,206.06 |
| 8762 | | |
| 8763 | | > fitmap #4 inMap #1 |
| 8764 | | |
| 8765 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8766 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8767 | | average map value = 0.07927, steps = 96 |
| 8768 | | shifted from previous position = 6.05 |
| 8769 | | rotated from previous position = 7.55 degrees |
| 8770 | | atoms outside contour = 1665, contour level = 0.062298 |
| 8771 | | |
| 8772 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8773 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8774 | | Matrix rotation and translation |
| 8775 | | 0.60849554 0.22807131 -0.76007674 129.97835162 |
| 8776 | | -0.30426319 0.95166276 0.04197494 123.81168171 |
| 8777 | | 0.73291002 0.20572181 0.64847625 123.29911898 |
| 8778 | | Axis 0.10276005 -0.93693030 -0.33406882 |
| 8779 | | Axis point -9.08005743 -0.00000000 195.13016984 |
| 8780 | | Rotation angle (degrees) 52.82027045 |
| 8781 | | Shift along axis -143.83672517 |
| 8782 | | |
| 8783 | | |
| 8784 | | > view matrix models |
| 8785 | | > #4,-0.81499,0.53457,-0.22365,74.832,0.19667,0.61823,0.761,117.22,0.54507,0.57622,-0.60898,202.32 |
| 8786 | | |
| 8787 | | > ui mousemode right "rotate selected models" |
| 8788 | | |
| 8789 | | > view matrix models |
| 8790 | | > #4,0.012963,0.88929,-0.45716,71.219,0.44308,0.40476,0.79991,118.35,0.89639,-0.21293,-0.38878,202.4 |
| 8791 | | |
| 8792 | | > view matrix models |
| 8793 | | > #4,-0.77393,-0.06515,-0.62991,76.525,0.62661,-0.22262,-0.74686,123.86,-0.091574,-0.97273,0.21312,205.58 |
| 8794 | | |
| 8795 | | > view matrix models |
| 8796 | | > #4,0.60978,-0.75195,0.25049,72.153,-0.56317,-0.63345,-0.53064,127.7,0.55769,0.1825,-0.80974,203.41 |
| 8797 | | |
| 8798 | | > fitmap #4 inMap #1 |
| 8799 | | |
| 8800 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8801 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8802 | | average map value = 0.08226, steps = 144 |
| 8803 | | shifted from previous position = 5.41 |
| 8804 | | rotated from previous position = 15.4 degrees |
| 8805 | | atoms outside contour = 1646, contour level = 0.062298 |
| 8806 | | |
| 8807 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8808 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8809 | | Matrix rotation and translation |
| 8810 | | 0.76031460 0.46736613 -0.45109933 123.65097429 |
| 8811 | | 0.31257001 -0.87202992 -0.37664811 126.50209410 |
| 8812 | | -0.56940468 0.14537094 -0.80910172 129.00767600 |
| 8813 | | Axis 0.93687620 0.21232458 -0.27781516 |
| 8814 | | Axis point 0.00000000 37.20351145 90.71057993 |
| 8815 | | Rotation angle (degrees) 163.82360021 |
| 8816 | | Shift along axis 106.86487078 |
| 8817 | | |
| 8818 | | |
| 8819 | | > ui mousemode right translate |
| 8820 | | |
| 8821 | | > ui mousemode right "translate selected models" |
| 8822 | | |
| 8823 | | > view matrix models |
| 8824 | | > #4,0.60978,-0.75195,0.25049,68.897,-0.56317,-0.63345,-0.53064,116.43,0.55769,0.1825,-0.80974,206.6 |
| 8825 | | |
| 8826 | | > fitmap #4 inMap #1 |
| 8827 | | |
| 8828 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8829 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8830 | | average map value = 0.07831, steps = 104 |
| 8831 | | shifted from previous position = 4.23 |
| 8832 | | rotated from previous position = 10.3 degrees |
| 8833 | | atoms outside contour = 1648, contour level = 0.062298 |
| 8834 | | |
| 8835 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8836 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8837 | | Matrix rotation and translation |
| 8838 | | 0.64018178 0.44068714 -0.62925521 134.12726347 |
| 8839 | | 0.38184806 -0.89328950 -0.23712006 123.97896914 |
| 8840 | | -0.66660284 -0.08847994 -0.74014319 125.03952127 |
| 8841 | | Axis 0.90542080 0.22749792 -0.35841021 |
| 8842 | | Axis point 0.00000000 41.44719489 91.34008249 |
| 8843 | | Rotation angle (degrees) 175.29166776 |
| 8844 | | Shift along axis 104.83113105 |
| 8845 | | |
| 8846 | | |
| 8847 | | > view matrix models |
| 8848 | | > #4,0.5763,-0.70152,0.41922,71.724,-0.49924,-0.70834,-0.49902,110.58,0.64702,0.078297,-0.75844,204.11 |
| 8849 | | |
| 8850 | | > fitmap #4 inMap #1 |
| 8851 | | |
| 8852 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8853 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8854 | | average map value = 0.07831, steps = 132 |
| 8855 | | shifted from previous position = 8.28 |
| 8856 | | rotated from previous position = 0.0257 degrees |
| 8857 | | atoms outside contour = 1648, contour level = 0.062298 |
| 8858 | | |
| 8859 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8860 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8861 | | Matrix rotation and translation |
| 8862 | | 0.64039228 0.44049125 -0.62917818 134.13105101 |
| 8863 | | 0.38192035 -0.89336419 -0.23672191 123.98758550 |
| 8864 | | -0.66635919 -0.08870107 -0.74033610 125.03465769 |
| 8865 | | Axis 0.90548044 0.22744550 -0.35829279 |
| 8866 | | Axis point 0.00000000 41.47213676 91.31835254 |
| 8867 | | Rotation angle (degrees) 175.31163752 |
| 8868 | | Shift along axis 104.85444550 |
| 8869 | | |
| 8870 | | |
| 8871 | | > ui mousemode right translate |
| 8872 | | |
| 8873 | | > ui mousemode right "translate selected models" |
| 8874 | | |
| 8875 | | > view matrix models |
| 8876 | | > #4,0.57616,-0.70139,0.41962,75.774,-0.49908,-0.70849,-0.49897,112.11,0.64727,0.078062,-0.75825,212.97 |
| 8877 | | |
| 8878 | | > fitmap #4 inMap #1 |
| 8879 | | |
| 8880 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8881 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8882 | | average map value = 0.0791, steps = 192 |
| 8883 | | shifted from previous position = 6.56 |
| 8884 | | rotated from previous position = 28.5 degrees |
| 8885 | | atoms outside contour = 1667, contour level = 0.062298 |
| 8886 | | |
| 8887 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8888 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8889 | | Matrix rotation and translation |
| 8890 | | 0.69882828 -0.01486950 -0.71513490 137.75694205 |
| 8891 | | 0.17498632 -0.96585127 0.19107880 125.90101641 |
| 8892 | | -0.69355520 -0.25867009 -0.67236223 122.70370441 |
| 8893 | | Axis -0.92037878 -0.04416131 0.38852629 |
| 8894 | | Axis point 0.00000000 70.13122166 82.19587773 |
| 8895 | | Rotation angle (degrees) 165.85786698 |
| 8896 | | Shift along axis -84.67490434 |
| 8897 | | |
| 8898 | | |
| 8899 | | > view matrix models |
| 8900 | | > #4,0.42679,-0.55518,0.71388,73.941,-0.65442,-0.73442,-0.17991,113.19,0.62417,-0.39039,-0.67677,212.86 |
| 8901 | | |
| 8902 | | > fitmap #4 inMap #1 |
| 8903 | | |
| 8904 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8905 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8906 | | average map value = 0.07803, steps = 140 |
| 8907 | | shifted from previous position = 3.12 |
| 8908 | | rotated from previous position = 14.8 degrees |
| 8909 | | atoms outside contour = 1690, contour level = 0.062298 |
| 8910 | | |
| 8911 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8912 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8913 | | Matrix rotation and translation |
| 8914 | | 0.61022791 -0.24096181 -0.75469152 143.00449080 |
| 8915 | | -0.01338327 -0.95562115 0.29429423 127.01107639 |
| 8916 | | -0.79211286 -0.16948631 -0.58637156 122.69095913 |
| 8917 | | Axis -0.89539474 0.07224724 0.43937296 |
| 8918 | | Axis point 0.00000000 80.40024431 86.74313536 |
| 8919 | | Rotation angle (degrees) 164.99039007 |
| 8920 | | Shift along axis -64.96217868 |
| 8921 | | |
| 8922 | | |
| 8923 | | > view matrix models |
| 8924 | | > #4,0.36642,-0.55781,0.7447,69.803,-0.80722,-0.58863,-0.043728,119.05,0.46275,-0.58511,-0.66596,210.67 |
| 8925 | | |
| 8926 | | > fitmap #4 inMap #1 |
| 8927 | | |
| 8928 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8929 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8930 | | average map value = 0.08138, steps = 96 |
| 8931 | | shifted from previous position = 4.09 |
| 8932 | | rotated from previous position = 9.94 degrees |
| 8933 | | atoms outside contour = 1668, contour level = 0.062298 |
| 8934 | | |
| 8935 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8936 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8937 | | Matrix rotation and translation |
| 8938 | | 0.54731308 -0.39983259 -0.73524301 136.85122598 |
| 8939 | | -0.12318353 -0.90741925 0.40176625 127.38222987 |
| 8940 | | -0.82781290 -0.12932210 -0.54589521 127.78539614 |
| 8941 | | Axis -0.87647564 0.15277167 0.45656464 |
| 8942 | | Axis point 0.00000000 88.62917623 87.69364102 |
| 8943 | | Rotation angle (degrees) 162.36403718 |
| 8944 | | Shift along axis -42.14407574 |
| 8945 | | |
| 8946 | | |
| 8947 | | > view matrix models |
| 8948 | | > #4,0.31978,-0.51478,0.79545,70.116,-0.87607,-0.48042,0.041281,120.22,0.3609,-0.71007,-0.60461,210.77 |
| 8949 | | |
| 8950 | | > fitmap #4 inMap #1 |
| 8951 | | |
| 8952 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8953 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8954 | | average map value = 0.08138, steps = 76 |
| 8955 | | shifted from previous position = 2.8 |
| 8956 | | rotated from previous position = 0.0332 degrees |
| 8957 | | atoms outside contour = 1664, contour level = 0.062298 |
| 8958 | | |
| 8959 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8960 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8961 | | Matrix rotation and translation |
| 8962 | | 0.54750387 -0.40007358 -0.73496981 136.85360489 |
| 8963 | | -0.12301184 -0.90724426 0.40221379 127.39459167 |
| 8964 | | -0.82771226 -0.12980362 -0.54593354 127.77335475 |
| 8965 | | Axis -0.87652029 0.15279694 0.45647046 |
| 8966 | | Axis point 0.00000000 88.65887103 87.65709939 |
| 8967 | | Rotation angle (degrees) 162.33309955 |
| 8968 | | Shift along axis -42.16469476 |
| 8969 | | |
| 8970 | | |
| 8971 | | > volume #1 step 2 |
| 8972 | | |
| 8973 | | > volume #1 color #c7c7c7e0 |
| 8974 | | |
| 8975 | | > view matrix models |
| 8976 | | > #4,0.3198,-0.51429,0.79576,75.918,-0.87595,-0.48061,0.041416,126.07,0.36115,-0.71029,-0.6042,216.08 |
| 8977 | | |
| 8978 | | > fitmap #4 inMap #1 |
| 8979 | | |
| 8980 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 8981 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 8982 | | average map value = 0.07882, steps = 60 |
| 8983 | | shifted from previous position = 2.54 |
| 8984 | | rotated from previous position = 3.68 degrees |
| 8985 | | atoms outside contour = 1723, contour level = 0.062298 |
| 8986 | | |
| 8987 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 8988 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 8989 | | Matrix rotation and translation |
| 8990 | | 0.53155230 -0.37780903 -0.75809793 139.59447662 |
| 8991 | | -0.15266997 -0.92308819 0.35298735 133.42441157 |
| 8992 | | -0.83315306 -0.07189245 -0.54834975 127.48814868 |
| 8993 | | Axis -0.87304203 0.15422310 0.46261522 |
| 8994 | | Axis point 0.00000000 89.44566049 90.82835369 |
| 8995 | | Rotation angle (degrees) 165.91666184 |
| 8996 | | Shift along axis -42.31676049 |
| 8997 | | |
| 8998 | | |
| 8999 | | > view matrix models |
| 9000 | | > #4,0.3198,-0.51429,0.79576,75.258,-0.87595,-0.48061,0.041416,123,0.36115,-0.71029,-0.6042,226.43 |
| 9001 | | |
| 9002 | | > fitmap #4 inMap #1 |
| 9003 | | |
| 9004 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9005 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9006 | | average map value = 0.08397, steps = 128 |
| 9007 | | shifted from previous position = 2.72 |
| 9008 | | rotated from previous position = 10.8 degrees |
| 9009 | | atoms outside contour = 1578, contour level = 0.062298 |
| 9010 | | |
| 9011 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9012 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9013 | | Matrix rotation and translation |
| 9014 | | 0.55322226 -0.23645172 -0.79877137 150.28862411 |
| 9015 | | -0.08145413 -0.96962987 0.23061469 133.95066867 |
| 9016 | | -0.82904183 -0.06251795 -0.55568080 128.23097608 |
| 9017 | | Axis -0.88036435 0.09091116 0.46550378 |
| 9018 | | Axis point 0.00000000 82.17957331 97.21012353 |
| 9019 | | Rotation angle (degrees) 170.41656333 |
| 9020 | | Shift along axis -60.43913297 |
| 9021 | | |
| 9022 | | |
| 9023 | | > view matrix models |
| 9024 | | > #4,0.35054,-0.63684,0.6867,79.442,-0.8555,-0.51611,-0.041938,123.19,0.38112,-0.57277,-0.72573,230.32 |
| 9025 | | |
| 9026 | | > fitmap #4 inMap #1 |
| 9027 | | |
| 9028 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9029 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9030 | | average map value = 0.07737, steps = 108 |
| 9031 | | shifted from previous position = 2.7 |
| 9032 | | rotated from previous position = 9.8 degrees |
| 9033 | | atoms outside contour = 1744, contour level = 0.062298 |
| 9034 | | |
| 9035 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9036 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9037 | | Matrix rotation and translation |
| 9038 | | 0.50363631 -0.11698051 -0.85595912 152.28976664 |
| 9039 | | -0.09793559 -0.99213396 0.07796682 140.26219409 |
| 9040 | | -0.85834671 0.04456194 -0.51113124 128.65249293 |
| 9041 | | Axis -0.86706120 0.06197258 0.49433215 |
| 9042 | | Axis point 0.00000000 76.45220405 106.93856480 |
| 9043 | | Rotation angle (degrees) 178.89622724 |
| 9044 | | Shift along axis -59.75507509 |
| 9045 | | |
| 9046 | | |
| 9047 | | > view matrix models |
| 9048 | | > #4,0.35054,-0.63684,0.6867,76.332,-0.8555,-0.51611,-0.041938,122.73,0.38112,-0.57277,-0.72573,224.46 |
| 9049 | | |
| 9050 | | > fitmap #4 inMap #1 |
| 9051 | | |
| 9052 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9053 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9054 | | average map value = 0.08397, steps = 76 |
| 9055 | | shifted from previous position = 2.5 |
| 9056 | | rotated from previous position = 0.0175 degrees |
| 9057 | | atoms outside contour = 1578, contour level = 0.062298 |
| 9058 | | |
| 9059 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9060 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9061 | | Matrix rotation and translation |
| 9062 | | 0.55321313 -0.23618741 -0.79885589 150.28965987 |
| 9063 | | -0.08119688 -0.96968693 0.23046542 133.95007386 |
| 9064 | | -0.82907315 -0.06263189 -0.55562123 128.23094130 |
| 9065 | | Axis -0.88036195 0.09076210 0.46553740 |
| 9066 | | Axis point 0.00000000 82.16621467 97.21451951 |
| 9067 | | Rotation angle (degrees) 170.41770259 |
| 9068 | | Shift along axis -60.45540948 |
| 9069 | | |
| 9070 | | |
| 9071 | | > fitmap #4 inMap #1 |
| 9072 | | |
| 9073 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9074 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9075 | | average map value = 0.08397, steps = 40 |
| 9076 | | shifted from previous position = 0.00567 |
| 9077 | | rotated from previous position = 0.00843 degrees |
| 9078 | | atoms outside contour = 1576, contour level = 0.062298 |
| 9079 | | |
| 9080 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9081 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9082 | | Matrix rotation and translation |
| 9083 | | 0.55318837 -0.23630287 -0.79883889 150.29066904 |
| 9084 | | -0.08133354 -0.96966447 0.23051172 133.95488398 |
| 9085 | | -0.82907628 -0.06254401 -0.55562646 128.22763268 |
| 9086 | | Axis -0.88035512 0.09083473 0.46553616 |
| 9087 | | Axis point 0.00000000 82.17362533 97.21378572 |
| 9088 | | Rotation angle (degrees) 170.41899980 |
| 9089 | | Shift along axis -60.44680284 |
| 9090 | | |
| 9091 | | |
| 9092 | | > view matrix models |
| 9093 | | > #4,0.35065,-0.63688,0.6866,73.461,-0.85544,-0.51619,-0.041933,120.87,0.38113,-0.57264,-0.72582,226.39 |
| 9094 | | |
| 9095 | | > fitmap #4 inMap #1 |
| 9096 | | |
| 9097 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9098 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9099 | | average map value = 0.08397, steps = 52 |
| 9100 | | shifted from previous position = 1.84 |
| 9101 | | rotated from previous position = 0.00922 degrees |
| 9102 | | atoms outside contour = 1579, contour level = 0.062298 |
| 9103 | | |
| 9104 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9105 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9106 | | Matrix rotation and translation |
| 9107 | | 0.55322305 -0.23644363 -0.79877322 150.28822063 |
| 9108 | | -0.08143515 -0.96963075 0.23061767 133.94851358 |
| 9109 | | -0.82904316 -0.06253479 -0.55567691 128.23239827 |
| 9110 | | Axis -0.88036446 0.09090349 0.46550508 |
| 9111 | | Axis point 0.00000000 82.17840119 97.21050504 |
| 9112 | | Rotation angle (degrees) 170.41591035 |
| 9113 | | Shift along axis -60.43918709 |
| 9114 | | |
| 9115 | | |
| 9116 | | > view matrix models |
| 9117 | | > #4,0.35055,-0.63684,0.6867,75.103,-0.85549,-0.51612,-0.041933,120.32,0.38113,-0.57276,-0.72573,225.89 |
| 9118 | | |
| 9119 | | > fitmap #4 inMap #1 |
| 9120 | | |
| 9121 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9122 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9123 | | average map value = 0.08397, steps = 60 |
| 9124 | | shifted from previous position = 1.86 |
| 9125 | | rotated from previous position = 0.0192 degrees |
| 9126 | | atoms outside contour = 1576, contour level = 0.062298 |
| 9127 | | |
| 9128 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9129 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9130 | | Matrix rotation and translation |
| 9131 | | 0.55319555 -0.23612884 -0.79888537 150.29061050 |
| 9132 | | -0.08124213 -0.96970762 0.23036240 133.95657531 |
| 9133 | | -0.82908045 -0.06253231 -0.55562156 128.23073298 |
| 9134 | | Axis -0.88035817 0.09075780 0.46554540 |
| 9135 | | Axis point 0.00000000 82.16402443 97.21982183 |
| 9136 | | Rotation angle (degrees) 170.42434731 |
| 9137 | | Shift along axis -60.45473572 |
| 9138 | | |
| 9139 | | |
| 9140 | | > ui mousemode right "rotate selected models" |
| 9141 | | |
| 9142 | | > view matrix models |
| 9143 | | > #4,-0.022057,-0.97384,0.22615,77.413,-0.59148,-0.16966,-0.78827,121.92,0.80602,-0.15115,-0.57227,222.07 |
| 9144 | | |
| 9145 | | > fitmap #4 inMap #1 |
| 9146 | | |
| 9147 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9148 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9149 | | average map value = 0.07669, steps = 96 |
| 9150 | | shifted from previous position = 3.48 |
| 9151 | | rotated from previous position = 13.1 degrees |
| 9152 | | atoms outside contour = 1715, contour level = 0.062298 |
| 9153 | | |
| 9154 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9155 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9156 | | Matrix rotation and translation |
| 9157 | | 0.98308697 0.13128904 -0.12768392 144.00650379 |
| 9158 | | 0.03127810 -0.80731665 -0.58928898 137.45050636 |
| 9159 | | -0.18044854 0.57532861 -0.79776896 123.89272183 |
| 9160 | | Axis 0.99531952 0.04509433 -0.08547255 |
| 9161 | | Axis point 0.00000000 43.42978949 89.41904803 |
| 9162 | | Rotation angle (degrees) 144.19368280 |
| 9163 | | Shift along axis 138.94129611 |
| 9164 | | |
| 9165 | | |
| 9166 | | > ui mousemode right "translate selected models" |
| 9167 | | |
| 9168 | | > view matrix models |
| 9169 | | > #4,-0.022057,-0.97384,0.22615,75.709,-0.59148,-0.16966,-0.78827,121.16,0.80602,-0.15115,-0.57227,216.43 |
| 9170 | | |
| 9171 | | > fitmap #4 inMap #1 |
| 9172 | | |
| 9173 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9174 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9175 | | average map value = 0.07966, steps = 96 |
| 9176 | | shifted from previous position = 7.66 |
| 9177 | | rotated from previous position = 8.07 degrees |
| 9178 | | atoms outside contour = 1599, contour level = 0.062298 |
| 9179 | | |
| 9180 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9181 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9182 | | Matrix rotation and translation |
| 9183 | | 0.94790806 0.02636207 -0.31745131 137.81785709 |
| 9184 | | -0.09457036 -0.92834854 -0.35947938 129.59705529 |
| 9185 | | -0.30418208 0.37077490 -0.87749600 120.50455315 |
| 9186 | | Axis 0.98640505 -0.01792366 -0.16335182 |
| 9187 | | Axis point 0.00000000 52.51881949 84.46834851 |
| 9188 | | Rotation angle (degrees) 158.27454930 |
| 9189 | | Shift along axis 113.93673806 |
| 9190 | | |
| 9191 | | |
| 9192 | | > fitmap #4 inMap #1 |
| 9193 | | |
| 9194 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9195 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9196 | | average map value = 0.07966, steps = 40 |
| 9197 | | shifted from previous position = 0.000851 |
| 9198 | | rotated from previous position = 0.00608 degrees |
| 9199 | | atoms outside contour = 1601, contour level = 0.062298 |
| 9200 | | |
| 9201 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9202 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9203 | | Matrix rotation and translation |
| 9204 | | 0.94789944 0.02640149 -0.31747379 137.81851632 |
| 9205 | | -0.09457319 -0.92831236 -0.35957205 129.59667906 |
| 9206 | | -0.30420808 0.37086265 -0.87744990 120.50420774 |
| 9207 | | Axis 0.98640252 -0.01791444 -0.16336810 |
| 9208 | | Axis point 0.00000000 52.51418442 84.47273085 |
| 9209 | | Rotation angle (degrees) 158.26885004 |
| 9210 | | Shift along axis 113.93633755 |
| 9211 | | |
| 9212 | | |
| 9213 | | > view matrix models |
| 9214 | | > #4,-0.071696,-0.93362,0.35103,80.027,-0.58684,-0.24509,-0.77172,117.92,0.80652,-0.26133,-0.53031,212.14 |
| 9215 | | |
| 9216 | | > ui mousemode right "rotate selected models" |
| 9217 | | |
| 9218 | | > view matrix models |
| 9219 | | > #4,-0.58782,-0.53557,-0.60633,83.009,-0.23461,0.83013,-0.50581,113.22,0.77422,-0.15507,-0.61362,212.17 |
| 9220 | | |
| 9221 | | > fitmap #4 inMap #1 |
| 9222 | | |
| 9223 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9224 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9225 | | average map value = 0.07856, steps = 104 |
| 9226 | | shifted from previous position = 2.93 |
| 9227 | | rotated from previous position = 7.01 degrees |
| 9228 | | atoms outside contour = 1690, contour level = 0.062298 |
| 9229 | | |
| 9230 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9231 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9232 | | Matrix rotation and translation |
| 9233 | | 0.91995547 -0.19716734 -0.33883176 141.49964405 |
| 9234 | | -0.34891453 -0.01777801 -0.93698590 132.98640113 |
| 9235 | | 0.17871927 0.98020864 -0.08514953 116.12147137 |
| 9236 | | Axis 0.96263422 -0.25986530 -0.07619312 |
| 9237 | | Axis point 0.00000000 27.21413370 138.10833398 |
| 9238 | | Rotation angle (degrees) 95.24910319 |
| 9239 | | Shift along axis 92.80619122 |
| 9240 | | |
| 9241 | | |
| 9242 | | > ui mousemode right "translate selected models" |
| 9243 | | |
| 9244 | | > view matrix models |
| 9245 | | > #4,-0.58782,-0.53557,-0.60633,74.617,-0.23461,0.83013,-0.50581,113.6,0.77422,-0.15507,-0.61362,219.95 |
| 9246 | | |
| 9247 | | > fitmap #4 inMap #1 |
| 9248 | | |
| 9249 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9250 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9251 | | average map value = 0.07732, steps = 248 |
| 9252 | | shifted from previous position = 5.65 |
| 9253 | | rotated from previous position = 19.6 degrees |
| 9254 | | atoms outside contour = 1660, contour level = 0.062298 |
| 9255 | | |
| 9256 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9257 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9258 | | Matrix rotation and translation |
| 9259 | | 0.83221429 -0.09832248 -0.54566661 143.57162652 |
| 9260 | | -0.54507686 0.03515199 -0.83764882 131.06244585 |
| 9261 | | 0.10154098 0.99453357 -0.02433932 121.83364026 |
| 9262 | | Axis 0.91892592 -0.32460514 -0.22406841 |
| 9263 | | Axis point 0.00000000 22.61448101 154.47683921 |
| 9264 | | Rotation angle (degrees) 94.50157614 |
| 9265 | | Shift along axis 62.08907576 |
| 9266 | | |
| 9267 | | |
| 9268 | | > view matrix models |
| 9269 | | > #4,-0.58782,-0.53557,-0.60633,71.76,-0.23461,0.83013,-0.50581,117.43,0.77422,-0.15507,-0.61362,216.45 |
| 9270 | | |
| 9271 | | > fitmap #4 inMap #1 |
| 9272 | | |
| 9273 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9274 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9275 | | average map value = 0.07132, steps = 92 |
| 9276 | | shifted from previous position = 1.9 |
| 9277 | | rotated from previous position = 3.27 degrees |
| 9278 | | atoms outside contour = 1830, contour level = 0.062298 |
| 9279 | | |
| 9280 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9281 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9282 | | Matrix rotation and translation |
| 9283 | | 0.89870970 -0.29650722 -0.32311660 143.46310048 |
| 9284 | | -0.32029744 0.05947759 -0.94544802 125.16445918 |
| 9285 | | 0.29955036 0.95317673 -0.04151741 125.69282627 |
| 9286 | | Axis 0.95013745 -0.31160407 -0.01190545 |
| 9287 | | Axis point 0.00000000 22.08759656 141.99175752 |
| 9288 | | Rotation angle (degrees) 92.38792335 |
| 9289 | | Shift along axis 95.81147930 |
| 9290 | | |
| 9291 | | |
| 9292 | | > ui mousemode right "translate selected atoms" |
| 9293 | | |
| 9294 | | > fitmap #4 inMap #1 |
| 9295 | | |
| 9296 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9297 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9298 | | average map value = 0.07648, steps = 112 |
| 9299 | | shifted from previous position = 5.1 |
| 9300 | | rotated from previous position = 7.19 degrees |
| 9301 | | atoms outside contour = 1735, contour level = 0.062298 |
| 9302 | | |
| 9303 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9304 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9305 | | Matrix rotation and translation |
| 9306 | | 0.90471017 -0.23078422 -0.35810353 139.74060659 |
| 9307 | | -0.34346979 0.10217721 -0.93358894 125.22177747 |
| 9308 | | 0.25204761 0.96762516 0.01317335 125.72538506 |
| 9309 | | Axis 0.95065488 -0.30509092 -0.05634562 |
| 9310 | | Axis point 0.00000000 15.62094298 147.72002296 |
| 9311 | | Rotation angle (degrees) 89.42529281 |
| 9312 | | Shift along axis 87.55698708 |
| 9313 | | |
| 9314 | | |
| 9315 | | > ui mousemode right translate |
| 9316 | | |
| 9317 | | > ui mousemode right "translate selected atoms" |
| 9318 | | |
| 9319 | | > fitmap #4 inMap #1 |
| 9320 | | |
| 9321 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9322 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9323 | | average map value = 0.07465, steps = 108 |
| 9324 | | shifted from previous position = 7.82 |
| 9325 | | rotated from previous position = 8.65 degrees |
| 9326 | | atoms outside contour = 1801, contour level = 0.062298 |
| 9327 | | |
| 9328 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9329 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9330 | | Matrix rotation and translation |
| 9331 | | 0.86214668 -0.43644711 -0.25732666 145.92523327 |
| 9332 | | -0.29275956 -0.01461404 -0.95607440 133.85088964 |
| 9333 | | 0.41351533 0.89961121 -0.14037351 127.12143741 |
| 9334 | | Axis 0.93795163 -0.33907540 0.07262651 |
| 9335 | | Axis point 0.00000000 38.19313507 135.18872216 |
| 9336 | | Rotation angle (degrees) 98.41954215 |
| 9337 | | Shift along axis 100.71765353 |
| 9338 | | |
| 9339 | | |
| 9340 | | > ui mousemode right "move picked models" |
| 9341 | | |
| 9342 | | > view matrix models |
| 9343 | | > #1,-0.20401,0.74731,-0.63238,86.196,-0.31775,0.56045,0.76481,-4.6742,0.92597,0.35696,0.12312,27.249 |
| 9344 | | |
| 9345 | | > view matrix models |
| 9346 | | > #1,-0.20401,0.74731,-0.63238,87.753,-0.31775,0.56045,0.76481,-4.1382,0.92597,0.35696,0.12312,24.538 |
| 9347 | | |
| 9348 | | > fitmap #4 inMap #1 |
| 9349 | | |
| 9350 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9351 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9352 | | average map value = 0.07732, steps = 232 |
| 9353 | | shifted from previous position = 6.36 |
| 9354 | | rotated from previous position = 19.5 degrees |
| 9355 | | atoms outside contour = 1662, contour level = 0.062298 |
| 9356 | | |
| 9357 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9358 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9359 | | Matrix rotation and translation |
| 9360 | | 0.83223995 -0.09928263 -0.54545359 136.65303528 |
| 9361 | | -0.54486993 0.03531137 -0.83777674 128.57688170 |
| 9362 | | 0.10243739 0.99443253 -0.02470859 127.44018496 |
| 9363 | | Axis 0.91894609 -0.32495026 -0.22348468 |
| 9364 | | Axis point 0.00000000 18.14273748 154.03785507 |
| 9365 | | Rotation angle (degrees) 94.50687036 |
| 9366 | | Shift along axis 55.31475249 |
| 9367 | | |
| 9368 | | |
| 9369 | | > view matrix models |
| 9370 | | > #1,-0.20401,0.74731,-0.63238,83.4,-0.31775,0.56045,0.76481,-4.2781,0.92597,0.35696,0.12312,23.842 |
| 9371 | | |
| 9372 | | > fitmap #4 inMap #1 |
| 9373 | | |
| 9374 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9375 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9376 | | average map value = 0.08103, steps = 88 |
| 9377 | | shifted from previous position = 2.05 |
| 9378 | | rotated from previous position = 12.8 degrees |
| 9379 | | atoms outside contour = 1614, contour level = 0.062298 |
| 9380 | | |
| 9381 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9382 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9383 | | Matrix rotation and translation |
| 9384 | | 0.92908533 -0.04723092 -0.36683741 135.05445463 |
| 9385 | | -0.36907966 -0.05377350 -0.92784083 129.38160453 |
| 9386 | | 0.02409665 0.99743553 -0.06739214 124.43596553 |
| 9387 | | Axis 0.96710868 -0.19637478 -0.16167170 |
| 9388 | | Axis point 0.00000000 13.51815952 142.09928784 |
| 9389 | | Rotation angle (degrees) 95.51119002 |
| 9390 | | Shift along axis 85.08727705 |
| 9391 | | |
| 9392 | | |
| 9393 | | > view matrix models |
| 9394 | | > #1,-0.20401,0.74731,-0.63238,89.476,-0.31775,0.56045,0.76481,-4.2417,0.92597,0.35696,0.12312,25.78 |
| 9395 | | |
| 9396 | | > fitmap #4 inMap #1 |
| 9397 | | |
| 9398 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9399 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9400 | | average map value = 0.07834, steps = 120 |
| 9401 | | shifted from previous position = 4.64 |
| 9402 | | rotated from previous position = 8.08 degrees |
| 9403 | | atoms outside contour = 1666, contour level = 0.062298 |
| 9404 | | |
| 9405 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9406 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9407 | | Matrix rotation and translation |
| 9408 | | 0.89045797 -0.16919965 -0.42244061 132.77692194 |
| 9409 | | -0.43783821 -0.06554624 -0.89666124 128.84501627 |
| 9410 | | 0.12402538 0.98339980 -0.13244825 125.73540389 |
| 9411 | | Axis 0.95134493 -0.27652168 -0.13593597 |
| 9412 | | Axis point 0.00000000 22.62159125 139.50822868 |
| 9413 | | Rotation angle (degrees) 98.84536633 |
| 9414 | | Shift along axis 73.59624624 |
| 9415 | | |
| 9416 | | |
| 9417 | | > ui mousemode right "rotate selected models" |
| 9418 | | |
| 9419 | | > ui mousemode right translate |
| 9420 | | |
| 9421 | | > ui mousemode right "translate selected models" |
| 9422 | | |
| 9423 | | > view matrix models |
| 9424 | | > #4,-0.58729,-0.63635,-0.50015,76.047,-0.43347,0.76914,-0.4696,115.97,0.68351,-0.058994,-0.72755,213.79 |
| 9425 | | |
| 9426 | | > fitmap #4 inMap #1 |
| 9427 | | |
| 9428 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9429 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9430 | | average map value = 0.08066, steps = 116 |
| 9431 | | shifted from previous position = 7.42 |
| 9432 | | rotated from previous position = 9.09 degrees |
| 9433 | | atoms outside contour = 1623, contour level = 0.062298 |
| 9434 | | |
| 9435 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9436 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9437 | | Matrix rotation and translation |
| 9438 | | 0.85089970 -0.05301747 -0.52264600 131.65004237 |
| 9439 | | -0.52512731 -0.05833216 -0.84902218 126.22962259 |
| 9440 | | 0.01452594 0.99688841 -0.07747574 124.04528145 |
| 9441 | | Axis 0.93246513 -0.27135339 -0.23848715 |
| 9442 | | Axis point 0.00000000 18.11494289 144.92785126 |
| 9443 | | Rotation angle (degrees) 98.18987940 |
| 9444 | | Shift along axis 58.92303103 |
| 9445 | | |
| 9446 | | |
| 9447 | | > ui mousemode right "rotate selected models" |
| 9448 | | |
| 9449 | | > view matrix models |
| 9450 | | > #4,-0.58124,-0.67798,-0.45,78.582,-0.56119,0.73444,-0.38165,119.52,0.58925,0.030708,-0.80736,207.99 |
| 9451 | | |
| 9452 | | > view matrix models |
| 9453 | | > #4,-0.2077,-0.25938,-0.94318,76.094,-0.27679,0.94038,-0.19766,118.88,0.93821,0.22001,-0.26711,207.92 |
| 9454 | | |
| 9455 | | > fitmap #4 inMap #1 |
| 9456 | | |
| 9457 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9458 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9459 | | average map value = 0.0793, steps = 76 |
| 9460 | | shifted from previous position = 2.13 |
| 9461 | | rotated from previous position = 3.44 degrees |
| 9462 | | atoms outside contour = 1659, contour level = 0.062298 |
| 9463 | | |
| 9464 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9465 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9466 | | Matrix rotation and translation |
| 9467 | | 0.99817019 -0.05958679 -0.01028001 131.89668118 |
| 9468 | | 0.01201056 0.36200257 -0.93209972 125.64950833 |
| 9469 | | 0.05926222 0.93027068 0.36205584 125.86819943 |
| 9470 | | Axis 0.99856694 -0.03728720 0.03838911 |
| 9471 | | Axis point 0.00000000 -23.00411886 155.82298682 |
| 9472 | | Rotation angle (degrees) 68.83135518 |
| 9473 | | Shift along axis 131.85451622 |
| 9474 | | |
| 9475 | | |
| 9476 | | > view matrix models |
| 9477 | | > #4,-0.29956,-0.377,-0.87643,77.211,-0.3032,0.90861,-0.28722,120.57,0.90462,0.1797,-0.38649,208.18 |
| 9478 | | |
| 9479 | | > fitmap #4 inMap #1 |
| 9480 | | |
| 9481 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9482 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9483 | | average map value = 0.07981, steps = 76 |
| 9484 | | shifted from previous position = 1.58 |
| 9485 | | rotated from previous position = 7.61 degrees |
| 9486 | | atoms outside contour = 1648, contour level = 0.062298 |
| 9487 | | |
| 9488 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9489 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9490 | | Matrix rotation and translation |
| 9491 | | 0.99433226 0.07199894 -0.07822725 131.46806924 |
| 9492 | | -0.09859349 0.34912593 -0.93187467 127.72573739 |
| 9493 | | -0.03978283 0.93430575 0.35424581 126.70632203 |
| 9494 | | Axis 0.99563838 -0.02051074 -0.09101391 |
| 9495 | | Axis point 0.00000000 -34.04450533 163.41135765 |
| 9496 | | Rotation angle (degrees) 69.58288552 |
| 9497 | | Shift along axis 116.74286852 |
| 9498 | | |
| 9499 | | |
| 9500 | | > view matrix models |
| 9501 | | > #4,-0.33994,-0.47815,-0.80982,78.388,-0.47179,0.83161,-0.29298,122.55,0.81354,0.28247,-0.50829,208.64 |
| 9502 | | |
| 9503 | | > fitmap #4 inMap #1 |
| 9504 | | |
| 9505 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9506 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9507 | | average map value = 0.07979, steps = 100 |
| 9508 | | shifted from previous position = 1.5 |
| 9509 | | rotated from previous position = 7.87 degrees |
| 9510 | | atoms outside contour = 1652, contour level = 0.062298 |
| 9511 | | |
| 9512 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9513 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9514 | | Matrix rotation and translation |
| 9515 | | 0.99236197 0.07413916 -0.09859563 132.09884040 |
| 9516 | | -0.10881913 0.14964834 -0.98273280 125.72983446 |
| 9517 | | -0.05810432 0.98595576 0.15657308 126.94870372 |
| 9518 | | Axis 0.99550066 -0.02047512 -0.09251596 |
| 9519 | | Axis point 0.00000000 -16.21652283 144.41256564 |
| 9520 | | Rotation angle (degrees) 81.41411871 |
| 9521 | | Shift along axis 117.18536886 |
| 9522 | | |
| 9523 | | |
| 9524 | | > view matrix models |
| 9525 | | > #4,-0.64679,0.5589,-0.51894,83.411,-0.14885,0.57483,0.80462,122.27,0.748,0.59767,-0.2886,211.04 |
| 9526 | | |
| 9527 | | > fitmap #4 inMap #1 |
| 9528 | | |
| 9529 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9530 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9531 | | average map value = 0.08228, steps = 136 |
| 9532 | | shifted from previous position = 0.978 |
| 9533 | | rotated from previous position = 9 degrees |
| 9534 | | atoms outside contour = 1614, contour level = 0.062298 |
| 9535 | | |
| 9536 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9537 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9538 | | Matrix rotation and translation |
| 9539 | | 0.90638174 0.27020908 -0.32474479 133.62794210 |
| 9540 | | -0.33272112 0.93026613 -0.15460136 132.43873217 |
| 9541 | | 0.26032439 0.24817730 0.93308050 124.22508915 |
| 9542 | | Axis 0.43230596 -0.62796002 -0.64713041 |
| 9543 | | Axis point 314.66026728 -554.76572562 0.00000000 |
| 9544 | | Rotation angle (degrees) 27.76518650 |
| 9545 | | Shift along axis -105.78790611 |
| 9546 | | |
| 9547 | | |
| 9548 | | > view matrix models |
| 9549 | | > #4,-0.66899,0.71327,-0.20904,85.146,-0.18956,0.10821,0.97589,120.92,0.71869,0.69248,0.062814,213.47 |
| 9550 | | |
| 9551 | | > fitmap #4 inMap #1 |
| 9552 | | |
| 9553 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9554 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9555 | | average map value = 0.0821, steps = 204 |
| 9556 | | shifted from previous position = 3.87 |
| 9557 | | rotated from previous position = 11.7 degrees |
| 9558 | | atoms outside contour = 1637, contour level = 0.062298 |
| 9559 | | |
| 9560 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9561 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9562 | | Matrix rotation and translation |
| 9563 | | 0.94175451 0.31645508 -0.11381839 130.70011035 |
| 9564 | | -0.23238183 0.85699030 0.45996337 131.77251823 |
| 9565 | | 0.24309900 -0.40672326 0.88061289 121.70754475 |
| 9566 | | Axis -0.79793164 -0.32860283 -0.50529721 |
| 9567 | | Axis point -0.00000000 73.05408187 -114.39566985 |
| 9568 | | Rotation angle (degrees) 32.89377735 |
| 9569 | | Shift along axis -209.08905955 |
| 9570 | | |
| 9571 | | |
| 9572 | | > view matrix models |
| 9573 | | > #4,-0.66622,0.72185,-0.18733,85.221,-0.10106,0.16148,0.98169,120.54,0.73888,0.67295,-0.034634,212.99 |
| 9574 | | |
| 9575 | | > fitmap #4 inMap #1 |
| 9576 | | |
| 9577 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9578 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9579 | | average map value = 0.07936, steps = 64 |
| 9580 | | shifted from previous position = 2.95 |
| 9581 | | rotated from previous position = 2.61 degrees |
| 9582 | | atoms outside contour = 1649, contour level = 0.062298 |
| 9583 | | |
| 9584 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9585 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9586 | | Matrix rotation and translation |
| 9587 | | 0.86588392 0.41238825 -0.28316244 131.97183304 |
| 9588 | | -0.30018279 0.88114532 0.36533985 134.95335598 |
| 9589 | | 0.40016912 -0.23134141 0.88676142 122.05396111 |
| 9590 | | Axis -0.51724672 -0.59236150 -0.61770841 |
| 9591 | | Axis point 21.26657571 -32.65094175 0.00000000 |
| 9592 | | Rotation angle (degrees) 35.22479842 |
| 9593 | | Shift along axis -223.59692894 |
| 9594 | | |
| 9595 | | |
| 9596 | | > ui mousemode right "translate selected models" |
| 9597 | | |
| 9598 | | > view matrix models |
| 9599 | | > #4,-0.65404,0.72066,-0.22998,85.969,-0.13731,0.18587,0.97293,122.44,0.7439,0.66791,-0.022608,217.46 |
| 9600 | | |
| 9601 | | > fitmap #4 inMap #1 |
| 9602 | | |
| 9603 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9604 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9605 | | average map value = 0.07998, steps = 88 |
| 9606 | | shifted from previous position = 1.85 |
| 9607 | | rotated from previous position = 6.89 degrees |
| 9608 | | atoms outside contour = 1661, contour level = 0.062298 |
| 9609 | | |
| 9610 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9611 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9612 | | Matrix rotation and translation |
| 9613 | | 0.89678619 0.40158528 -0.18575196 136.43157762 |
| 9614 | | -0.29501794 0.85557311 0.42539282 136.49910604 |
| 9615 | | 0.32975588 -0.32668625 0.88574102 121.98073307 |
| 9616 | | Axis -0.65543869 -0.44926630 -0.60709135 |
| 9617 | | Axis point 0.00000000 -13.56428792 -88.06659000 |
| 9618 | | Rotation angle (degrees) 35.01017579 |
| 9619 | | Shift along axis -224.80043161 |
| 9620 | | |
| 9621 | | |
| 9622 | | > ui mousemode right "rotate selected models" |
| 9623 | | |
| 9624 | | > view matrix models |
| 9625 | | > #4,-0.67512,0.69467,-0.2483,86.564,-0.18315,0.16821,0.96859,122.31,0.71461,0.69939,0.013664,216.18 |
| 9626 | | |
| 9627 | | > view matrix models |
| 9628 | | > #4,-0.791,0.26076,-0.55346,84.954,-0.51033,0.21774,0.83196,124.24,0.33745,0.94053,-0.039154,219.34 |
| 9629 | | |
| 9630 | | > fitmap #4 inMap #1 |
| 9631 | | |
| 9632 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9633 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9634 | | average map value = 0.08006, steps = 188 |
| 9635 | | shifted from previous position = 4.25 |
| 9636 | | rotated from previous position = 19.8 degrees |
| 9637 | | atoms outside contour = 1649, contour level = 0.062298 |
| 9638 | | |
| 9639 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9640 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9641 | | Matrix rotation and translation |
| 9642 | | 0.83888482 0.54184363 -0.05174676 141.72062594 |
| 9643 | | -0.53209545 0.83637342 0.13173429 138.81200710 |
| 9644 | | 0.11465900 -0.08297568 0.98993350 125.16592371 |
| 9645 | | Axis -0.19382322 -0.15021799 -0.96946744 |
| 9646 | | Axis point 251.72924420 -126.01087162 0.00000000 |
| 9647 | | Rotation angle (degrees) 33.63367174 |
| 9648 | | Shift along axis -169.66509560 |
| 9649 | | |
| 9650 | | |
| 9651 | | > view matrix models |
| 9652 | | > #4,-0.58864,0.40719,-0.69835,83.723,-0.80788,-0.26563,0.52608,123.79,0.028711,0.87386,0.48533,227.1 |
| 9653 | | |
| 9654 | | > fitmap #4 inMap #1 |
| 9655 | | |
| 9656 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9657 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9658 | | average map value = 0.08075, steps = 60 |
| 9659 | | shifted from previous position = 1.99 |
| 9660 | | rotated from previous position = 4.31 degrees |
| 9661 | | atoms outside contour = 1650, contour level = 0.062298 |
| 9662 | | |
| 9663 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9664 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9665 | | Matrix rotation and translation |
| 9666 | | 0.34544181 0.84299076 0.41235485 145.74513963 |
| 9667 | | -0.91495569 0.40022729 -0.05171264 138.27861457 |
| 9668 | | -0.20862894 -0.35942271 0.90955443 125.44880483 |
| 9669 | | Axis -0.16284189 0.32862808 -0.93031506 |
| 9670 | | Axis point 189.89897282 -7.08850465 0.00000000 |
| 9671 | | Rotation angle (degrees) 70.87611637 |
| 9672 | | Shift along axis -94.99808940 |
| 9673 | | |
| 9674 | | |
| 9675 | | > ui mousemode right translate |
| 9676 | | |
| 9677 | | > ui mousemode right "translate selected models" |
| 9678 | | |
| 9679 | | > view matrix models |
| 9680 | | > #4,-0.6223,0.35441,-0.69795,77.875,-0.78211,-0.31844,0.53563,127.32,-0.032424,0.8792,0.47535,227.66 |
| 9681 | | |
| 9682 | | > fitmap #4 inMap #1 |
| 9683 | | |
| 9684 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9685 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9686 | | average map value = 0.08093, steps = 140 |
| 9687 | | shifted from previous position = 5.89 |
| 9688 | | rotated from previous position = 7.31 degrees |
| 9689 | | atoms outside contour = 1670, contour level = 0.062298 |
| 9690 | | |
| 9691 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9692 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9693 | | Matrix rotation and translation |
| 9694 | | 0.30892790 0.87410570 0.37483699 143.10785659 |
| 9695 | | -0.94671991 0.32033838 0.03323736 137.44038844 |
| 9696 | | -0.09102171 -0.36513359 0.92649474 128.47461322 |
| 9697 | | Axis -0.20735190 0.24247924 -0.94773889 |
| 9698 | | Axis point 174.05626836 1.90756844 0.00000000 |
| 9699 | | Rotation angle (degrees) 73.86625251 |
| 9700 | | Shift along axis -118.10763312 |
| 9701 | | |
| 9702 | | |
| 9703 | | > view matrix models |
| 9704 | | > #4,-0.71296,0.29197,-0.63753,82.981,-0.69836,-0.37747,0.60812,127.07,-0.063094,0.87879,0.47302,225.65 |
| 9705 | | |
| 9706 | | > fitmap #4 inMap #1 |
| 9707 | | |
| 9708 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9709 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9710 | | average map value = 0.08191, steps = 76 |
| 9711 | | shifted from previous position = 1.18 |
| 9712 | | rotated from previous position = 9.83 degrees |
| 9713 | | atoms outside contour = 1669, contour level = 0.062298 |
| 9714 | | |
| 9715 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9716 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9717 | | Matrix rotation and translation |
| 9718 | | 0.20894932 0.93382224 0.29037251 145.49512346 |
| 9719 | | -0.96505669 0.24491342 -0.09318257 139.22155389 |
| 9720 | | -0.15813209 -0.26075550 0.95236590 128.93203143 |
| 9721 | | Axis -0.08557017 0.22902635 -0.96965183 |
| 9722 | | Axis point 170.58937938 -1.62285005 0.00000000 |
| 9723 | | Rotation angle (degrees) 78.28086458 |
| 9724 | | Shift along axis -105.58381935 |
| 9725 | | |
| 9726 | | |
| 9727 | | > view matrix models |
| 9728 | | > #4,-0.66383,0.15742,-0.73113,78.856,-0.7282,-0.35889,0.58389,122.3,-0.17048,0.92001,0.35287,228.3 |
| 9729 | | |
| 9730 | | > fitmap #4 inMap #1 |
| 9731 | | |
| 9732 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9733 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9734 | | average map value = 0.07807, steps = 68 |
| 9735 | | shifted from previous position = 1.43 |
| 9736 | | rotated from previous position = 5.84 degrees |
| 9737 | | atoms outside contour = 1663, contour level = 0.062298 |
| 9738 | | |
| 9739 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9740 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9741 | | Matrix rotation and translation |
| 9742 | | 0.28482571 0.91675129 0.28007389 149.81901177 |
| 9743 | | -0.95416286 0.29915663 -0.00886236 136.52720948 |
| 9744 | | -0.09191054 -0.26471188 0.95993753 127.25554668 |
| 9745 | | Axis -0.13293528 0.19327711 -0.97209679 |
| 9746 | | Axis point 174.43237287 -10.34633246 0.00000000 |
| 9747 | | Rotation angle (degrees) 74.21907217 |
| 9748 | | Shift along axis -117.23335644 |
| 9749 | | |
| 9750 | | |
| 9751 | | > view matrix models |
| 9752 | | > #4,-0.71304,0.20394,-0.6708,79.973,-0.69555,-0.32609,0.64021,123.95,-0.088178,0.92308,0.37436,230.72 |
| 9753 | | |
| 9754 | | > fitmap #4 inMap #1 |
| 9755 | | |
| 9756 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9757 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9758 | | average map value = 0.07813, steps = 96 |
| 9759 | | shifted from previous position = 2.3 |
| 9760 | | rotated from previous position = 5.06 degrees |
| 9761 | | atoms outside contour = 1662, contour level = 0.062298 |
| 9762 | | |
| 9763 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9764 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9765 | | Matrix rotation and translation |
| 9766 | | 0.34394475 0.87911683 0.32993272 150.81690116 |
| 9767 | | -0.93468516 0.35414397 0.03075214 136.98764003 |
| 9768 | | -0.08980896 -0.31896026 0.94350342 127.01057351 |
| 9769 | | Axis -0.18461333 0.22158182 -0.95750687 |
| 9770 | | Axis point 182.13518487 -10.62234054 0.00000000 |
| 9771 | | Rotation angle (degrees) 71.28892535 |
| 9772 | | Shift along axis -119.10233753 |
| 9773 | | |
| 9774 | | |
| 9775 | | > view matrix models |
| 9776 | | > #4,-0.71188,0.28701,-0.64098,80.811,-0.70181,-0.3248,0.634,127.85,-0.026224,0.90118,0.43265,229.9 |
| 9777 | | |
| 9778 | | > view matrix models |
| 9779 | | > #4,-0.71188,0.28701,-0.64098,81.482,-0.70181,-0.3248,0.634,127.53,-0.026224,0.90118,0.43265,230.51 |
| 9780 | | |
| 9781 | | > fitmap #4 inMap #1 |
| 9782 | | |
| 9783 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9784 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9785 | | average map value = 0.0792, steps = 76 |
| 9786 | | shifted from previous position = 1.56 |
| 9787 | | rotated from previous position = 6.08 degrees |
| 9788 | | atoms outside contour = 1626, contour level = 0.062298 |
| 9789 | | |
| 9790 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9791 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9792 | | Matrix rotation and translation |
| 9793 | | 0.41595819 0.83486145 0.36053452 150.02337449 |
| 9794 | | -0.90786514 0.40413591 0.11160221 141.95954026 |
| 9795 | | -0.05253256 -0.37373858 0.92604525 129.78536774 |
| 9796 | | Axis -0.26155370 0.22260487 -0.93916811 |
| 9797 | | Axis point 191.50496680 -5.14791019 0.00000000 |
| 9798 | | Rotation angle (degrees) 68.09494307 |
| 9799 | | Shift along axis -129.52856212 |
| 9800 | | |
| 9801 | | |
| 9802 | | > ui mousemode right "rotate selected models" |
| 9803 | | |
| 9804 | | > view matrix models |
| 9805 | | > #4,-0.73924,0.28654,-0.60944,82.568,-0.67344,-0.31709,0.66779,126.92,-0.0018935,0.90407,0.42737,231.66 |
| 9806 | | |
| 9807 | | > view matrix models |
| 9808 | | > #4,-0.70359,0.060537,-0.70802,81.273,-0.68497,-0.32299,0.65306,126.93,-0.18915,0.94446,0.26872,232.57 |
| 9809 | | |
| 9810 | | > fitmap #4 inMap #1 |
| 9811 | | |
| 9812 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9813 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9814 | | average map value = 0.07763, steps = 60 |
| 9815 | | shifted from previous position = 1.92 |
| 9816 | | rotated from previous position = 4.12 degrees |
| 9817 | | atoms outside contour = 1676, contour level = 0.062298 |
| 9818 | | |
| 9819 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9820 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9821 | | Matrix rotation and translation |
| 9822 | | 0.19968872 0.94765695 0.24913993 151.81819491 |
| 9823 | | -0.97579763 0.21545249 -0.03740577 142.13488790 |
| 9824 | | -0.08912566 -0.23564064 0.96774485 128.84740373 |
| 9825 | | Axis -0.10098529 0.17232007 -0.97985089 |
| 9826 | | Axis point 169.81008331 -4.31897522 0.00000000 |
| 9827 | | Rotation angle (degrees) 78.96299010 |
| 9828 | | Shift along axis -117.08995310 |
| 9829 | | |
| 9830 | | |
| 9831 | | > ui mousemode right "move picked models" |
| 9832 | | |
| 9833 | | > view matrix models |
| 9834 | | > #1,-0.20401,0.74731,-0.63238,93.204,-0.31775,0.56045,0.76481,-3.4428,0.92597,0.35696,0.12312,29.11 |
| 9835 | | |
| 9836 | | > fitmap #4 inMap #1 |
| 9837 | | |
| 9838 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9839 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9840 | | average map value = 0.07572, steps = 92 |
| 9841 | | shifted from previous position = 1.41 |
| 9842 | | rotated from previous position = 4.83 degrees |
| 9843 | | atoms outside contour = 1701, contour level = 0.062298 |
| 9844 | | |
| 9845 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9846 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9847 | | Matrix rotation and translation |
| 9848 | | 0.18733981 0.96405108 0.18843910 150.58571792 |
| 9849 | | -0.98208716 0.18776906 0.01573486 137.80014066 |
| 9850 | | -0.02021382 -0.18801139 0.98195881 131.60494847 |
| 9851 | | Axis -0.10353657 0.10602996 -0.98895795 |
| 9852 | | Axis point 160.27210263 -7.01416117 0.00000000 |
| 9853 | | Rotation angle (degrees) 79.71562811 |
| 9854 | | Shift along axis -131.13194425 |
| 9855 | | |
| 9856 | | |
| 9857 | | > view matrix models |
| 9858 | | > #1,-0.20401,0.74731,-0.63238,92.939,-0.31775,0.56045,0.76481,-1.4244,0.92597,0.35696,0.12312,28.834 |
| 9859 | | |
| 9860 | | > select add #1 |
| 9861 | | |
| 9862 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 9863 | | |
| 9864 | | > select subtract #4 |
| 9865 | | |
| 9866 | | 5 models selected |
| 9867 | | |
| 9868 | | > view matrix models |
| 9869 | | > #1,-0.20401,0.74731,-0.63238,94.679,-0.31775,0.56045,0.76481,-2.5962,0.92597,0.35696,0.12312,30.021 |
| 9870 | | |
| 9871 | | > ui mousemode right "rotate selected models" |
| 9872 | | |
| 9873 | | > view matrix models |
| 9874 | | > #1,-0.19728,0.72683,-0.65788,98.67,-0.30099,0.59375,0.74624,-6.2718,0.933,0.34523,0.10163,32.629 |
| 9875 | | |
| 9876 | | > view matrix models |
| 9877 | | > #1,-0.28916,0.67624,-0.67756,116.75,-0.33405,0.59203,0.73343,-0.97386,0.89711,0.43841,0.054705,31.424 |
| 9878 | | |
| 9879 | | > view matrix models |
| 9880 | | > #1,-0.33318,0.76916,-0.54533,98.547,-0.3934,0.41222,0.82178,16.465,0.85687,0.48833,0.16524,19.606 |
| 9881 | | |
| 9882 | | > view matrix models |
| 9883 | | > #1,-0.25429,0.82482,-0.50498,79.351,-0.33543,0.41452,0.84597,7.0785,0.9071,0.3845,0.17126,24.403 |
| 9884 | | |
| 9885 | | > fitmap #4 inMap #1 |
| 9886 | | |
| 9887 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9888 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9889 | | average map value = 0.08133, steps = 108 |
| 9890 | | shifted from previous position = 3.84 |
| 9891 | | rotated from previous position = 14.7 degrees |
| 9892 | | atoms outside contour = 1649, contour level = 0.062298 |
| 9893 | | |
| 9894 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9895 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9896 | | Matrix rotation and translation |
| 9897 | | 0.57830381 0.68691664 0.44012523 148.34454233 |
| 9898 | | -0.81020305 0.54678065 0.21119167 138.52966420 |
| 9899 | | -0.09558088 -0.47872376 0.87274730 129.35682259 |
| 9900 | | Axis -0.39803560 0.30906702 -0.86373911 |
| 9901 | | Axis point 222.65876564 -5.11962620 0.00000000 |
| 9902 | | Rotation angle (degrees) 60.07169864 |
| 9903 | | Shift along axis -127.96200486 |
| 9904 | | |
| 9905 | | |
| 9906 | | > ui mousemode right "move picked models" |
| 9907 | | |
| 9908 | | > view matrix models |
| 9909 | | > #1,-0.25429,0.82482,-0.50498,79.89,-0.33543,0.41452,0.84597,8.2653,0.9071,0.3845,0.17126,24.949 |
| 9910 | | |
| 9911 | | > ui mousemode right translate |
| 9912 | | |
| 9913 | | > ui mousemode right rotate |
| 9914 | | |
| 9915 | | > fitmap #4 inMap #1 |
| 9916 | | |
| 9917 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9918 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9919 | | average map value = 0.08133, steps = 96 |
| 9920 | | shifted from previous position = 2.92 |
| 9921 | | rotated from previous position = 14.7 degrees |
| 9922 | | atoms outside contour = 1648, contour level = 0.062298 |
| 9923 | | |
| 9924 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9925 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9926 | | Matrix rotation and translation |
| 9927 | | 0.57837661 0.68688793 0.44007438 148.34412722 |
| 9928 | | -0.81014409 0.54688722 0.21114195 138.52918051 |
| 9929 | | -0.09564019 -0.47864322 0.87278497 129.35845002 |
| 9930 | | Axis -0.39798914 0.30909418 -0.86375079 |
| 9931 | | Axis point 222.68601302 -5.13925567 0.00000000 |
| 9932 | | Rotation angle (degrees) 60.06452404 |
| 9933 | | Shift along axis -127.95425215 |
| 9934 | | |
| 9935 | | |
| 9936 | | > ui mousemode right "rotate selected models" |
| 9937 | | |
| 9938 | | > view matrix models |
| 9939 | | > #1,-0.25376,0.83145,-0.49426,78.04,-0.29709,0.41929,0.85787,2.1172,0.92051,0.36454,0.14061,28.626 |
| 9940 | | |
| 9941 | | > view matrix models |
| 9942 | | > #1,-0.47372,0.87578,-0.092723,58.453,-0.25748,-0.037046,0.96557,36.032,0.8422,0.48128,0.24305,14.809 |
| 9943 | | |
| 9944 | | > view matrix models |
| 9945 | | > #1,-0.50638,0.85529,-0.10984,66.165,-0.25213,-0.025041,0.96737,33.934,0.82463,0.51755,0.22832,14.402 |
| 9946 | | |
| 9947 | | > view matrix models |
| 9948 | | > #1,-0.67728,0.66443,0.31595,63.875,-0.078258,-0.49206,0.86704,74.318,0.73156,0.5625,0.38526,4.586 |
| 9949 | | |
| 9950 | | > view matrix models |
| 9951 | | > #1,-0.75345,0.56674,0.33336,81.504,0.19557,-0.29088,0.93656,13.906,0.62775,0.77084,0.10833,21.867 |
| 9952 | | |
| 9953 | | > fitmap #4 inMap #1 |
| 9954 | | |
| 9955 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9956 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9957 | | average map value = 0.08043, steps = 116 |
| 9958 | | shifted from previous position = 4.37 |
| 9959 | | rotated from previous position = 12.4 degrees |
| 9960 | | atoms outside contour = 1652, contour level = 0.062298 |
| 9961 | | |
| 9962 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9963 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9964 | | Matrix rotation and translation |
| 9965 | | 0.42828826 -0.04123052 0.90270106 150.41442584 |
| 9966 | | -0.19746259 0.97054631 0.13801583 139.34791591 |
| 9967 | | -0.88180365 -0.23736026 0.40753211 126.05381255 |
| 9968 | | Axis -0.20509682 0.97501215 -0.08536160 |
| 9969 | | Axis point 195.30797015 0.00000000 -64.34712758 |
| 9970 | | Rotation angle (degrees) 66.22266406 |
| 9971 | | Shift along axis 94.25623538 |
| 9972 | | |
| 9973 | | |
| 9974 | | > select add #4 |
| 9975 | | |
| 9976 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 5 models selected |
| 9977 | | |
| 9978 | | > select subtract #1 |
| 9979 | | |
| 9980 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 9981 | | |
| 9982 | | > view matrix models |
| 9983 | | > #4,0.28228,-0.76215,0.58262,81.268,0.11687,-0.57547,-0.80943,111.44,0.95219,0.29658,-0.073378,227.53 |
| 9984 | | |
| 9985 | | > fitmap #4 inMap #1 |
| 9986 | | |
| 9987 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 9988 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 9989 | | average map value = 0.0787, steps = 100 |
| 9990 | | shifted from previous position = 3.52 |
| 9991 | | rotated from previous position = 13 degrees |
| 9992 | | atoms outside contour = 1666, contour level = 0.062298 |
| 9993 | | |
| 9994 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 9995 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 9996 | | Matrix rotation and translation |
| 9997 | | 0.42471923 0.46625666 -0.77602725 146.16461992 |
| 9998 | | 0.88127155 -0.01664779 0.47231695 126.74441392 |
| 9999 | | 0.20730179 -0.88449283 -0.41796936 115.60338274 |
| 10000 | | Axis -0.78596481 -0.56961707 0.24040739 |
| 10001 | | Axis point 0.00000000 66.55809571 67.01576619 |
| 10002 | | Rotation angle (degrees) 120.32796464 |
| 10003 | | Shift along axis -159.28412212 |
| 10004 | | |
| 10005 | | |
| 10006 | | > view matrix models |
| 10007 | | > #4,-0.099923,-0.40111,0.91056,85.493,-0.37386,-0.83295,-0.40795,116.96,0.92209,-0.38119,-0.066729,222.52 |
| 10008 | | |
| 10009 | | > fitmap #4 inMap #1 |
| 10010 | | |
| 10011 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10012 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10013 | | average map value = 0.07384, steps = 108 |
| 10014 | | shifted from previous position = 1.22 |
| 10015 | | rotated from previous position = 5.16 degrees |
| 10016 | | atoms outside contour = 1798, contour level = 0.062298 |
| 10017 | | |
| 10018 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10019 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10020 | | Matrix rotation and translation |
| 10021 | | 0.52453497 -0.16452158 -0.83534167 144.20830254 |
| 10022 | | 0.78523836 -0.28569860 0.54934236 126.51148100 |
| 10023 | | -0.32903462 -0.94409160 -0.02067025 120.57177529 |
| 10024 | | Axis -0.81127327 -0.27503953 0.51593500 |
| 10025 | | Axis point 0.00000000 106.83443888 64.59299622 |
| 10026 | | Rotation angle (degrees) 113.01156596 |
| 10027 | | Shift along axis -89.58080095 |
| 10028 | | |
| 10029 | | |
| 10030 | | > ui mousemode right "translate selected models" |
| 10031 | | |
| 10032 | | > view matrix models |
| 10033 | | > #4,-0.099923,-0.40111,0.91056,88.229,-0.37386,-0.83295,-0.40795,117.96,0.92209,-0.38119,-0.066729,227.22 |
| 10034 | | |
| 10035 | | > view matrix models |
| 10036 | | > #4,-0.099923,-0.40111,0.91056,88.394,-0.37386,-0.83295,-0.40795,122.96,0.92209,-0.38119,-0.066729,224.52 |
| 10037 | | |
| 10038 | | > fitmap #4 inMap #1 |
| 10039 | | |
| 10040 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10041 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10042 | | average map value = 0.079, steps = 172 |
| 10043 | | shifted from previous position = 2.95 |
| 10044 | | rotated from previous position = 21.6 degrees |
| 10045 | | atoms outside contour = 1709, contour level = 0.062298 |
| 10046 | | |
| 10047 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10048 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10049 | | Matrix rotation and translation |
| 10050 | | 0.31155777 -0.22171387 -0.92399930 142.62012359 |
| 10051 | | 0.78028727 -0.49525367 0.38193662 126.16514011 |
| 10052 | | -0.54229469 -0.83998021 0.01870038 126.23783995 |
| 10053 | | Axis -0.75164140 -0.23479911 0.61636400 |
| 10054 | | Axis point 0.00000000 96.36758622 83.22147174 |
| 10055 | | Rotation angle (degrees) 125.62641430 |
| 10056 | | Shift along axis -59.01419299 |
| 10057 | | |
| 10058 | | |
| 10059 | | > ui mousemode right "rotate selected models" |
| 10060 | | |
| 10061 | | > view matrix models |
| 10062 | | > #4,-0.6878,0.36434,-0.62784,87.957,-0.69851,-0.096833,0.70902,122.91,0.19753,0.92622,0.32109,235.81 |
| 10063 | | |
| 10064 | | > fitmap #4 inMap #1 |
| 10065 | | |
| 10066 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10067 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10068 | | average map value = 0.08187, steps = 144 |
| 10069 | | shifted from previous position = 6.55 |
| 10070 | | rotated from previous position = 17.2 degrees |
| 10071 | | atoms outside contour = 1624, contour level = 0.062298 |
| 10072 | | |
| 10073 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10074 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10075 | | Matrix rotation and translation |
| 10076 | | 0.26184439 0.28462597 0.92218521 146.24857833 |
| 10077 | | -0.15461330 0.95555308 -0.25102398 137.07580325 |
| 10078 | | -0.95264486 -0.07685288 0.29421317 127.87751302 |
| 10079 | | Axis 0.09008275 0.96967786 -0.22717824 |
| 10080 | | Axis point 170.22284208 0.00000000 -10.90246157 |
| 10081 | | Rotation angle (degrees) 75.17869066 |
| 10082 | | Shift along axis 117.04285788 |
| 10083 | | |
| 10084 | | |
| 10085 | | > view matrix models |
| 10086 | | > #4,-0.64195,0.15089,-0.75176,91.339,-0.60065,0.51044,0.61536,124.11,0.47658,0.84657,-0.23705,227.53 |
| 10087 | | |
| 10088 | | > fitmap #4 inMap #1 |
| 10089 | | |
| 10090 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10091 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10092 | | average map value = 0.07935, steps = 76 |
| 10093 | | shifted from previous position = 4.72 |
| 10094 | | rotated from previous position = 9.49 degrees |
| 10095 | | atoms outside contour = 1675, contour level = 0.062298 |
| 10096 | | |
| 10097 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10098 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10099 | | Matrix rotation and translation |
| 10100 | | 0.63382678 0.60811362 0.47797639 141.42233677 |
| 10101 | | 0.02323414 0.60271195 -0.79762050 129.27686924 |
| 10102 | | -0.77312598 0.51665861 0.36788598 126.94361715 |
| 10103 | | Axis 0.68937427 0.65623639 -0.30678481 |
| 10104 | | Axis point 0.00000000 -172.03618397 129.79920724 |
| 10105 | | Rotation angle (degrees) 72.40946887 |
| 10106 | | Shift along axis 143.38473287 |
| 10107 | | |
| 10108 | | |
| 10109 | | > view matrix models |
| 10110 | | > #4,-0.82936,-0.10068,-0.54957,92.312,-0.083454,0.99492,-0.056326,120.37,0.55245,-0.000851,-0.83355,222.39 |
| 10111 | | |
| 10112 | | > fitmap #4 inMap #1 |
| 10113 | | |
| 10114 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10115 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10116 | | average map value = 0.07575, steps = 88 |
| 10117 | | shifted from previous position = 2.68 |
| 10118 | | rotated from previous position = 9.95 degrees |
| 10119 | | atoms outside contour = 1727, contour level = 0.062298 |
| 10120 | | |
| 10121 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10122 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10123 | | Matrix rotation and translation |
| 10124 | | 0.93245450 0.35699857 -0.05550330 139.39595010 |
| 10125 | | 0.01778244 -0.19879050 -0.97988066 131.59474227 |
| 10126 | | -0.36084952 0.91270716 -0.19171140 128.09040311 |
| 10127 | | Axis 0.97213237 0.15684184 -0.17423920 |
| 10128 | | Axis point 0.00000000 -7.12657574 121.59386451 |
| 10129 | | Rotation angle (degrees) 103.23959962 |
| 10130 | | Shift along axis 133.83250752 |
| 10131 | | |
| 10132 | | |
| 10133 | | > ui mousemode right translate |
| 10134 | | |
| 10135 | | > ui mousemode right "rotate selected models" |
| 10136 | | |
| 10137 | | > view matrix models |
| 10138 | | > #4,-0.78088,-0.11959,-0.61312,91.741,-0.14443,0.98947,-0.0090525,120.89,0.60775,0.081482,-0.78993,222.44 |
| 10139 | | |
| 10140 | | > ui mousemode right "translate selected models" |
| 10141 | | |
| 10142 | | > view matrix models |
| 10143 | | > #4,-0.78088,-0.11959,-0.61312,85.843,-0.14443,0.98947,-0.0090525,126.17,0.60775,0.081482,-0.78993,226.47 |
| 10144 | | |
| 10145 | | > fitmap #4 inMap #1 |
| 10146 | | |
| 10147 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10148 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10149 | | average map value = 0.0776, steps = 92 |
| 10150 | | shifted from previous position = 3.16 |
| 10151 | | rotated from previous position = 7.56 degrees |
| 10152 | | atoms outside contour = 1706, contour level = 0.062298 |
| 10153 | | |
| 10154 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10155 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10156 | | Matrix rotation and translation |
| 10157 | | 0.92132159 0.38160996 0.07443363 145.41206163 |
| 10158 | | 0.19772954 -0.29504449 -0.93480039 128.79257561 |
| 10159 | | -0.33476791 0.87596951 -0.34728642 128.92211619 |
| 10160 | | Axis 0.97065426 0.21935046 -0.09856819 |
| 10161 | | Axis point 0.00000000 -3.01877276 105.19085350 |
| 10162 | | Rotation angle (degrees) 111.13119215 |
| 10163 | | Shift along axis 156.68792807 |
| 10164 | | |
| 10165 | | |
| 10166 | | > view matrix models |
| 10167 | | > #4,-0.78088,-0.11959,-0.61312,84.782,-0.14443,0.98947,-0.0090525,122.36,0.60775,0.081482,-0.78993,224.83 |
| 10168 | | |
| 10169 | | > fitmap #4 inMap #1 |
| 10170 | | |
| 10171 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10172 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10173 | | average map value = 0.07546, steps = 68 |
| 10174 | | shifted from previous position = 3.14 |
| 10175 | | rotated from previous position = 6.18 degrees |
| 10176 | | atoms outside contour = 1732, contour level = 0.062298 |
| 10177 | | |
| 10178 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10179 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10180 | | Matrix rotation and translation |
| 10181 | | 0.96382296 0.26516771 0.02704402 144.38149251 |
| 10182 | | 0.09219146 -0.23644511 -0.96726131 129.12657501 |
| 10183 | | -0.25009204 0.93476189 -0.25233742 123.10950000 |
| 10184 | | Axis 0.98556809 0.14360312 -0.08963081 |
| 10185 | | Axis point 0.00000000 1.10176726 109.84791570 |
| 10186 | | Rotation angle (degrees) 105.21725496 |
| 10187 | | Shift along axis 149.80636656 |
| 10188 | | |
| 10189 | | |
| 10190 | | > view matrix models |
| 10191 | | > #4,-0.78088,-0.11959,-0.61312,88.515,-0.14443,0.98947,-0.0090525,130.18,0.60775,0.081482,-0.78993,227.9 |
| 10192 | | |
| 10193 | | > view matrix models |
| 10194 | | > #4,-0.78088,-0.11959,-0.61312,86.498,-0.14443,0.98947,-0.0090525,128.72,0.60775,0.081482,-0.78993,227.64 |
| 10195 | | |
| 10196 | | > fitmap #4 inMap #1 |
| 10197 | | |
| 10198 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10199 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10200 | | average map value = 0.08122, steps = 128 |
| 10201 | | shifted from previous position = 3.77 |
| 10202 | | rotated from previous position = 18.8 degrees |
| 10203 | | atoms outside contour = 1602, contour level = 0.062298 |
| 10204 | | |
| 10205 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10206 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10207 | | Matrix rotation and translation |
| 10208 | | 0.93765792 0.34038889 0.07023547 145.79236643 |
| 10209 | | 0.06382142 0.03001833 -0.99750976 129.04888892 |
| 10210 | | -0.34164959 0.93980546 0.00642282 130.01154379 |
| 10211 | | Axis 0.96873885 0.20595980 -0.13829533 |
| 10212 | | Axis point 0.00000000 -27.77113083 125.43904618 |
| 10213 | | Rotation angle (degrees) 90.74202785 |
| 10214 | | Shift along axis 149.83362372 |
| 10215 | | |
| 10216 | | |
| 10217 | | > view matrix models |
| 10218 | | > #4,-0.7842,0.073838,-0.6161,86.436,-0.15516,0.93802,0.30991,125.31,0.6008,0.33863,-0.72413,226.67 |
| 10219 | | |
| 10220 | | > fitmap #4 inMap #1 |
| 10221 | | |
| 10222 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10223 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10224 | | average map value = 0.08122, steps = 72 |
| 10225 | | shifted from previous position = 2.19 |
| 10226 | | rotated from previous position = 0.0322 degrees |
| 10227 | | atoms outside contour = 1601, contour level = 0.062298 |
| 10228 | | |
| 10229 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10230 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10231 | | Matrix rotation and translation |
| 10232 | | 0.93761880 0.34060283 0.06971861 145.78415670 |
| 10233 | | 0.06334853 0.02980237 -0.99754638 129.06130518 |
| 10234 | | -0.34184490 0.93973481 0.00636657 130.01833478 |
| 10235 | | Axis 0.96872380 0.20579943 -0.13863906 |
| 10236 | | Axis point 0.00000000 -27.76593587 125.48718577 |
| 10237 | | Rotation angle (degrees) 90.75094726 |
| 10238 | | Shift along axis 149.75970642 |
| 10239 | | |
| 10240 | | |
| 10241 | | > ui mousemode right translate |
| 10242 | | |
| 10243 | | > ui mousemode right "translate selected models" |
| 10244 | | |
| 10245 | | > view matrix models |
| 10246 | | > #4,-0.7845,0.073531,-0.61575,89.964,-0.15521,0.93806,0.30977,126.27,0.60039,0.33859,-0.72449,225.41 |
| 10247 | | |
| 10248 | | > fitmap #4 inMap #1 |
| 10249 | | |
| 10250 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10251 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10252 | | average map value = 0.08123, steps = 80 |
| 10253 | | shifted from previous position = 2.42 |
| 10254 | | rotated from previous position = 0.0541 degrees |
| 10255 | | atoms outside contour = 1602, contour level = 0.062298 |
| 10256 | | |
| 10257 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10258 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10259 | | Matrix rotation and translation |
| 10260 | | 0.93771417 0.34017101 0.07053939 145.79504656 |
| 10261 | | 0.06407121 0.03022503 -0.99748750 129.04412546 |
| 10262 | | -0.34144839 0.93987772 0.00654726 130.00884771 |
| 10263 | | Axis 0.96876144 0.20601066 -0.13806114 |
| 10264 | | Axis point 0.00000000 -27.77407067 125.41779990 |
| 10265 | | Rotation angle (degrees) 90.73092889 |
| 10266 | | Shift along axis 149.87591534 |
| 10267 | | |
| 10268 | | |
| 10269 | | > select add #1 |
| 10270 | | |
| 10271 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 10272 | | |
| 10273 | | > select subtract #4 |
| 10274 | | |
| 10275 | | 5 models selected |
| 10276 | | |
| 10277 | | > view matrix models |
| 10278 | | > #1,-0.75345,0.56674,0.33336,81.242,0.19557,-0.29088,0.93656,14.097,0.62775,0.77084,0.10833,21.722 |
| 10279 | | |
| 10280 | | > ui mousemode right "rotate selected models" |
| 10281 | | |
| 10282 | | > view matrix models |
| 10283 | | > #1,-0.71102,0.62276,0.32653,70.963,0.25593,-0.20332,0.94507,-3.2062,0.65494,0.75554,-0.01482,32.576 |
| 10284 | | |
| 10285 | | > fitmap #4 inMap #1 |
| 10286 | | |
| 10287 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10288 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10289 | | average map value = 0.08122, steps = 28 |
| 10290 | | shifted from previous position = 0.0243 |
| 10291 | | rotated from previous position = 0.0547 degrees |
| 10292 | | atoms outside contour = 1604, contour level = 0.062298 |
| 10293 | | |
| 10294 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10295 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10296 | | Matrix rotation and translation |
| 10297 | | 0.93760161 0.34064539 0.06974195 145.78221756 |
| 10298 | | 0.06338436 0.02977132 -0.99754503 129.06502347 |
| 10299 | | -0.34188542 0.93972037 0.00632204 130.01883690 |
| 10300 | | Axis 0.96871650 0.20583149 -0.13864251 |
| 10301 | | Axis point 0.00000000 -27.76403610 125.48498866 |
| 10302 | | Rotation angle (degrees) 90.75360543 |
| 10303 | | Shift along axis 149.76114820 |
| 10304 | | |
| 10305 | | |
| 10306 | | > fitmap #4 inMap #1 |
| 10307 | | |
| 10308 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10309 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10310 | | average map value = 0.08122, steps = 40 |
| 10311 | | shifted from previous position = 0.0191 |
| 10312 | | rotated from previous position = 0.0341 degrees |
| 10313 | | atoms outside contour = 1602, contour level = 0.062298 |
| 10314 | | |
| 10315 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10316 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10317 | | Matrix rotation and translation |
| 10318 | | 0.93765992 0.34037770 0.07026293 145.79264048 |
| 10319 | | 0.06384458 0.03003522 -0.99750777 129.04870567 |
| 10320 | | -0.34163977 0.93980897 0.00643155 130.01142949 |
| 10321 | | Axis 0.96873944 0.20596859 -0.13827813 |
| 10322 | | Axis point 0.00000000 -27.77180668 125.43721667 |
| 10323 | | Rotation angle (degrees) 90.74123654 |
| 10324 | | Shift along axis 149.83732249 |
| 10325 | | |
| 10326 | | |
| 10327 | | > select add #4 |
| 10328 | | |
| 10329 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 5 models selected |
| 10330 | | |
| 10331 | | > select subtract #1 |
| 10332 | | |
| 10333 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 10334 | | |
| 10335 | | > view matrix models |
| 10336 | | > #4,-0.72787,0.14447,-0.67032,90.253,0.041774,0.98508,0.16695,129.71,0.68444,0.093519,-0.72305,223.01 |
| 10337 | | |
| 10338 | | > view matrix models |
| 10339 | | > #4,-0.53664,0.26106,-0.80241,89,0.22445,0.96084,0.1625,128.41,0.81341,-0.092903,-0.57422,221.96 |
| 10340 | | |
| 10341 | | > fitmap #4 inMap #1 |
| 10342 | | |
| 10343 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10344 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10345 | | average map value = 0.07806, steps = 60 |
| 10346 | | shifted from previous position = 2.23 |
| 10347 | | rotated from previous position = 4.58 degrees |
| 10348 | | atoms outside contour = 1700, contour level = 0.062298 |
| 10349 | | |
| 10350 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10351 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10352 | | Matrix rotation and translation |
| 10353 | | 0.96129322 -0.00998274 0.27534646 147.11865562 |
| 10354 | | 0.27485255 -0.03515530 -0.96084347 128.44749607 |
| 10355 | | 0.01927174 0.99933200 -0.03105077 127.88680648 |
| 10356 | | Axis 0.98143897 0.12821388 0.14261400 |
| 10357 | | Axis point 0.00000000 5.14059855 104.24558504 |
| 10358 | | Rotation angle (degrees) 93.00691182 |
| 10359 | | Shift along axis 179.09518230 |
| 10360 | | |
| 10361 | | |
| 10362 | | > view matrix models |
| 10363 | | > #4,0.42513,0.36397,-0.82873,82.925,0.19199,0.85849,0.47553,129.19,0.88454,-0.36127,0.29509,223.13 |
| 10364 | | |
| 10365 | | > fitmap #4 inMap #1 |
| 10366 | | |
| 10367 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10368 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10369 | | average map value = 0.08, steps = 68 |
| 10370 | | shifted from previous position = 2.42 |
| 10371 | | rotated from previous position = 8.02 degrees |
| 10372 | | atoms outside contour = 1652, contour level = 0.062298 |
| 10373 | | |
| 10374 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10375 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10376 | | Matrix rotation and translation |
| 10377 | | 0.42113221 -0.29357072 0.85817474 151.47016879 |
| 10378 | | 0.87803725 -0.10523551 -0.46687908 125.02330462 |
| 10379 | | 0.22737248 0.95012721 0.21344796 128.07710735 |
| 10380 | | Axis 0.72897563 0.32451477 0.60273103 |
| 10381 | | Axis point 0.00000000 33.90074742 28.92667751 |
| 10382 | | Rotation angle (degrees) 103.61093865 |
| 10383 | | Shift along axis 228.18601780 |
| 10384 | | |
| 10385 | | |
| 10386 | | > fitmap #4 inMap #1 |
| 10387 | | |
| 10388 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10389 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10390 | | average map value = 0.08, steps = 40 |
| 10391 | | shifted from previous position = 0.00645 |
| 10392 | | rotated from previous position = 0.00656 degrees |
| 10393 | | atoms outside contour = 1648, contour level = 0.062298 |
| 10394 | | |
| 10395 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10396 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10397 | | Matrix rotation and translation |
| 10398 | | 0.42108890 -0.29347872 0.85822746 151.46965380 |
| 10399 | | 0.87806747 -0.10525772 -0.46681723 125.02955967 |
| 10400 | | 0.22733599 0.95015317 0.21337126 128.07735895 |
| 10401 | | Axis 0.72897009 0.32456642 0.60270992 |
| 10402 | | Axis point 0.00000000 33.89682330 28.92306056 |
| 10403 | | Rotation angle (degrees) 103.61513050 |
| 10404 | | Shift along axis 228.19073841 |
| 10405 | | |
| 10406 | | |
| 10407 | | > view matrix models |
| 10408 | | > #4,-0.63603,-0.71092,0.30009,88.625,-0.32585,0.59995,0.73067,134.08,-0.69949,0.36695,-0.61324,234.96 |
| 10409 | | |
| 10410 | | > fitmap #4 inMap #1 |
| 10411 | | |
| 10412 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10413 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10414 | | average map value = 0.0787, steps = 76 |
| 10415 | | shifted from previous position = 3.22 |
| 10416 | | rotated from previous position = 7.05 degrees |
| 10417 | | atoms outside contour = 1695, contour level = 0.062298 |
| 10418 | | |
| 10419 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10420 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10421 | | Matrix rotation and translation |
| 10422 | | -0.03334725 0.87463750 -0.48362918 152.58801335 |
| 10423 | | -0.80941969 -0.30749365 -0.50028733 137.31364666 |
| 10424 | | -0.58628297 0.37477578 0.71820289 134.59522441 |
| 10425 | | Axis 0.46041149 0.05401094 -0.88606099 |
| 10426 | | Axis point 168.33479114 2.52885325 0.00000000 |
| 10427 | | Rotation angle (degrees) 108.13873807 |
| 10428 | | Shift along axis -41.58986363 |
| 10429 | | |
| 10430 | | |
| 10431 | | > view matrix models |
| 10432 | | > #4,-0.80756,-0.56075,0.18278,89.924,-0.18557,0.53574,0.82374,133.21,-0.55983,0.6313,-0.5367,235.16 |
| 10433 | | |
| 10434 | | > fitmap #4 inMap #1 |
| 10435 | | |
| 10436 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10437 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10438 | | average map value = 0.07801, steps = 72 |
| 10439 | | shifted from previous position = 1.99 |
| 10440 | | rotated from previous position = 10.3 degrees |
| 10441 | | atoms outside contour = 1712, contour level = 0.062298 |
| 10442 | | |
| 10443 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10444 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10445 | | Matrix rotation and translation |
| 10446 | | 0.23482553 0.90686458 -0.34993370 153.46951552 |
| 10447 | | -0.81862930 -0.00960622 -0.57424192 136.96025652 |
| 10448 | | -0.52412119 0.42131265 0.74013013 134.53593422 |
| 10449 | | Axis 0.49785201 0.08710682 -0.86287646 |
| 10450 | | Axis point 194.92229494 -19.99928717 0.00000000 |
| 10451 | | Rotation angle (degrees) 90.99271484 |
| 10452 | | Shift along axis -27.75261125 |
| 10453 | | |
| 10454 | | |
| 10455 | | > view matrix models |
| 10456 | | > #4,-0.75711,-0.62257,0.19797,89.425,0.21645,0.046854,0.97517,129.33,-0.61638,0.78116,0.099284,237.92 |
| 10457 | | |
| 10458 | | > fitmap #4 inMap #1 |
| 10459 | | |
| 10460 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10461 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10462 | | average map value = 0.08036, steps = 108 |
| 10463 | | shifted from previous position = 4.21 |
| 10464 | | rotated from previous position = 10.7 degrees |
| 10465 | | atoms outside contour = 1619, contour level = 0.062298 |
| 10466 | | |
| 10467 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10468 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10469 | | Matrix rotation and translation |
| 10470 | | 0.06041847 0.99282359 0.10320326 151.96019462 |
| 10471 | | -0.99447785 0.05098384 0.09173029 138.71569966 |
| 10472 | | 0.08581030 -0.10817556 0.99042144 126.56369082 |
| 10473 | | Axis -0.10008272 0.00870777 -0.99494102 |
| 10474 | | Axis point 143.61353255 -3.04141401 0.00000000 |
| 10475 | | Rotation angle (degrees) 87.08170283 |
| 10476 | | Shift along axis -139.92409190 |
| 10477 | | |
| 10478 | | |
| 10479 | | > view matrix models |
| 10480 | | > #4,-0.64736,-0.68483,0.33455,90.879,0.4136,0.053043,0.90891,125.93,-0.6402,0.72677,0.24891,235.05 |
| 10481 | | |
| 10482 | | > fitmap #4 inMap #1 |
| 10483 | | |
| 10484 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10485 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10486 | | average map value = 0.08036, steps = 68 |
| 10487 | | shifted from previous position = 0.159 |
| 10488 | | rotated from previous position = 8.76 degrees |
| 10489 | | atoms outside contour = 1618, contour level = 0.062298 |
| 10490 | | |
| 10491 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10492 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10493 | | Matrix rotation and translation |
| 10494 | | 0.06037944 0.99284381 0.10303146 151.96155956 |
| 10495 | | -0.99450871 0.05099701 0.09138774 138.71773144 |
| 10496 | | 0.08547946 -0.10798363 0.99047099 126.56596315 |
| 10497 | | Axis -0.09981519 0.00878740 -0.99496719 |
| 10498 | | Axis point 143.63696909 -3.05723050 0.00000000 |
| 10499 | | Rotation angle (degrees) 87.08102297 |
| 10500 | | Shift along axis -139.87808420 |
| 10501 | | |
| 10502 | | |
| 10503 | | > view matrix models |
| 10504 | | > #4,-0.25527,-0.21461,0.94275,91.681,0.8037,0.49495,0.33029,123.16,-0.5375,0.842,0.046131,234.17 |
| 10505 | | |
| 10506 | | > fitmap #4 inMap #1 |
| 10507 | | |
| 10508 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10509 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10510 | | average map value = 0.08368, steps = 268 |
| 10511 | | shifted from previous position = 5.77 |
| 10512 | | rotated from previous position = 23.2 degrees |
| 10513 | | atoms outside contour = 1667, contour level = 0.062298 |
| 10514 | | |
| 10515 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10516 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10517 | | Matrix rotation and translation |
| 10518 | | 0.30875312 0.76506079 -0.56511370 145.15718767 |
| 10519 | | -0.84761616 0.49087788 0.20145906 142.39546566 |
| 10520 | | 0.43153024 0.41679839 0.80003796 121.32686576 |
| 10521 | | Axis 0.11286232 -0.52235488 -0.84522629 |
| 10522 | | Axis point 127.85716894 -97.89549927 0.00000000 |
| 10523 | | Rotation angle (degrees) 72.55233796 |
| 10524 | | Shift along axis -160.54684573 |
| 10525 | | |
| 10526 | | |
| 10527 | | > ui mousemode right "translate selected models" |
| 10528 | | |
| 10529 | | > view matrix models |
| 10530 | | > #4,-0.25527,-0.21461,0.94275,92.543,0.8037,0.49495,0.33029,126.87,-0.5375,0.842,0.046131,233.78 |
| 10531 | | |
| 10532 | | > fitmap #4 inMap #1 |
| 10533 | | |
| 10534 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10535 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10536 | | average map value = 0.07659, steps = 128 |
| 10537 | | shifted from previous position = 3.15 |
| 10538 | | rotated from previous position = 9.17 degrees |
| 10539 | | atoms outside contour = 1710, contour level = 0.062298 |
| 10540 | | |
| 10541 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10542 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10543 | | Matrix rotation and translation |
| 10544 | | 0.05405389 0.82006954 -0.56970529 150.47893123 |
| 10545 | | -0.82588945 0.35739280 0.43609287 137.14870493 |
| 10546 | | 0.56123506 0.44694108 0.69660525 125.87616261 |
| 10547 | | Axis 0.00543204 -0.56629724 -0.82418319 |
| 10548 | | Axis point 97.98950066 -71.66116607 0.00000000 |
| 10549 | | Rotation angle (degrees) 86.90303211 |
| 10550 | | Shift along axis -180.59454313 |
| 10551 | | |
| 10552 | | |
| 10553 | | > view matrix models |
| 10554 | | > #4,-0.25527,-0.21461,0.94275,93.328,0.8037,0.49495,0.33029,125.8,-0.5375,0.842,0.046131,237.48 |
| 10555 | | |
| 10556 | | > fitmap #4 inMap #1 |
| 10557 | | |
| 10558 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10559 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10560 | | average map value = 0.07939, steps = 76 |
| 10561 | | shifted from previous position = 3.21 |
| 10562 | | rotated from previous position = 10.7 degrees |
| 10563 | | atoms outside contour = 1688, contour level = 0.062298 |
| 10564 | | |
| 10565 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10566 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10567 | | Matrix rotation and translation |
| 10568 | | 0.17140233 0.80279537 -0.57108740 150.72110782 |
| 10569 | | -0.79363248 0.45597515 0.40278298 142.47435380 |
| 10570 | | 0.58375398 0.38419557 0.71527969 123.93466900 |
| 10571 | | Axis -0.00943318 -0.58608660 -0.81019350 |
| 10572 | | Axis point 99.47682653 -82.89352727 0.00000000 |
| 10573 | | Rotation angle (degrees) 80.13492489 |
| 10574 | | Shift along axis -185.33515345 |
| 10575 | | |
| 10576 | | |
| 10577 | | > view matrix models |
| 10578 | | > #4,-0.25527,-0.21461,0.94275,93.825,0.8037,0.49495,0.33029,128.57,-0.5375,0.842,0.046131,235.87 |
| 10579 | | |
| 10580 | | > fitmap #4 inMap #1 |
| 10581 | | |
| 10582 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10583 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10584 | | average map value = 0.07612, steps = 144 |
| 10585 | | shifted from previous position = 2.38 |
| 10586 | | rotated from previous position = 7.81 degrees |
| 10587 | | atoms outside contour = 1723, contour level = 0.062298 |
| 10588 | | |
| 10589 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10590 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10591 | | Matrix rotation and translation |
| 10592 | | 0.08925412 0.81895269 -0.56687757 152.40823825 |
| 10593 | | -0.80417942 0.39505250 0.44410468 140.18276741 |
| 10594 | | 0.58764713 0.41623310 0.69384497 129.81008573 |
| 10595 | | Axis -0.01399141 -0.57956621 -0.81480503 |
| 10596 | | Axis point 95.59400320 -76.56114210 0.00000000 |
| 10597 | | Rotation angle (degrees) 84.88955917 |
| 10598 | | Shift along axis -189.14751303 |
| 10599 | | |
| 10600 | | |
| 10601 | | > select subtract #4 |
| 10602 | | |
| 10603 | | 3 models selected |
| 10604 | | |
| 10605 | | > select add #1 |
| 10606 | | |
| 10607 | | 2 models selected |
| 10608 | | |
| 10609 | | > ui mousemode right "rotate selected models" |
| 10610 | | |
| 10611 | | > view matrix models |
| 10612 | | > #1,-0.77422,0.5395,0.33095,86.831,0.27787,-0.18009,0.94359,-8.107,0.56866,0.8225,-0.010482,34.896 |
| 10613 | | |
| 10614 | | > fitmap #4 inMap #1 |
| 10615 | | |
| 10616 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10617 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10618 | | average map value = 0.07372, steps = 72 |
| 10619 | | shifted from previous position = 4.03 |
| 10620 | | rotated from previous position = 6.44 degrees |
| 10621 | | atoms outside contour = 1752, contour level = 0.062298 |
| 10622 | | |
| 10623 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10624 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10625 | | Matrix rotation and translation |
| 10626 | | 0.03339568 0.83228268 -0.55334461 146.23095010 |
| 10627 | | -0.73392882 0.39623289 0.55167741 146.56656907 |
| 10628 | | 0.67840490 0.38769192 0.62406871 126.15334963 |
| 10629 | | Axis -0.08202232 -0.61609685 -0.78338816 |
| 10630 | | Axis point 81.36566570 -61.38080497 0.00000000 |
| 10631 | | Rotation angle (degrees) 88.46150112 |
| 10632 | | Shift along axis -201.12044359 |
| 10633 | | |
| 10634 | | |
| 10635 | | > fitmap #4 inMap #1 |
| 10636 | | |
| 10637 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10638 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10639 | | average map value = 0.07372, steps = 72 |
| 10640 | | shifted from previous position = 4.03 |
| 10641 | | rotated from previous position = 6.44 degrees |
| 10642 | | atoms outside contour = 1752, contour level = 0.062298 |
| 10643 | | |
| 10644 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10645 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10646 | | Matrix rotation and translation |
| 10647 | | 0.03339568 0.83228268 -0.55334461 146.23095010 |
| 10648 | | -0.73392882 0.39623289 0.55167741 146.56656907 |
| 10649 | | 0.67840490 0.38769192 0.62406871 126.15334963 |
| 10650 | | Axis -0.08202232 -0.61609685 -0.78338816 |
| 10651 | | Axis point 81.36566570 -61.38080497 0.00000000 |
| 10652 | | Rotation angle (degrees) 88.46150112 |
| 10653 | | Shift along axis -201.12044359 |
| 10654 | | |
| 10655 | | |
| 10656 | | > view matrix models |
| 10657 | | > #1,0.62143,-0.64327,0.44724,41.349,0.77258,0.40833,-0.48619,14.414,0.13013,0.64767,0.75073,28.23 |
| 10658 | | |
| 10659 | | > fitmap #4 inMap #1 |
| 10660 | | |
| 10661 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10662 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10663 | | average map value = 0.07095, steps = 120 |
| 10664 | | shifted from previous position = 6.28 |
| 10665 | | rotated from previous position = 25.1 degrees |
| 10666 | | atoms outside contour = 1877, contour level = 0.062298 |
| 10667 | | |
| 10668 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10669 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10670 | | Matrix rotation and translation |
| 10671 | | 0.10006907 0.07203477 0.99236947 147.38729243 |
| 10672 | | 0.22918354 0.96888787 -0.09344080 143.51792357 |
| 10673 | | -0.96822574 0.23678528 0.08044653 126.80887849 |
| 10674 | | Axis 0.16557567 0.98304431 0.07879454 |
| 10675 | | Axis point 123.53834456 0.00000000 -7.21110770 |
| 10676 | | Rotation angle (degrees) 85.71591500 |
| 10677 | | Shift along axis 175.48007615 |
| 10678 | | |
| 10679 | | |
| 10680 | | > view matrix models |
| 10681 | | > #1,0.46585,-0.8794,-0.098166,139.57,0.83899,0.47423,-0.26684,-22.39,0.28121,0.041947,0.95873,55.318 |
| 10682 | | |
| 10683 | | > fitmap #4 inMap #1 |
| 10684 | | |
| 10685 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10686 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10687 | | average map value = 0.06371, steps = 196 |
| 10688 | | shifted from previous position = 6.08 |
| 10689 | | rotated from previous position = 4.26 degrees |
| 10690 | | atoms outside contour = 2027, contour level = 0.062298 |
| 10691 | | |
| 10692 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10693 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10694 | | Matrix rotation and translation |
| 10695 | | 0.45399393 0.52041955 0.72322403 152.30235745 |
| 10696 | | 0.54409760 0.48085038 -0.68756142 116.42865741 |
| 10697 | | -0.70558295 0.70565317 -0.06485587 133.71364405 |
| 10698 | | Axis 0.69808383 0.71591774 0.01186412 |
| 10699 | | Axis point 105.40272311 0.00000000 53.59800700 |
| 10700 | | Rotation angle (degrees) 93.72718517 |
| 10701 | | Shift along axis 191.25954889 |
| 10702 | | |
| 10703 | | |
| 10704 | | > view matrix models |
| 10705 | | > #1,0.45165,-0.88495,-0.11349,143.35,0.84481,0.46509,-0.26454,-22.307,0.28689,0.023609,0.95767,56.748 |
| 10706 | | |
| 10707 | | > select add #4 |
| 10708 | | |
| 10709 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 5 models selected |
| 10710 | | |
| 10711 | | > view matrix models |
| 10712 | | > #1,-0.3559,-0.43273,-0.8283,259.68,0.91796,0.004275,-0.39665,32.255,0.17518,-0.90151,0.3957,225.98,#4,0.17874,-0.97032,0.16292,39.14,0.65541,0.24092,0.71582,121.96,-0.73382,-0.021167,0.67901,201.12 |
| 10713 | | |
| 10714 | | > select subtract #1 |
| 10715 | | |
| 10716 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 10717 | | |
| 10718 | | > view matrix models |
| 10719 | | > #4,0.14754,-0.98444,0.095412,39.1,0.67568,0.17077,0.71714,121.6,-0.72228,-0.04134,0.69037,201.01 |
| 10720 | | |
| 10721 | | > ui mousemode right "translate selected models" |
| 10722 | | |
| 10723 | | > view matrix models |
| 10724 | | > #4,0.14754,-0.98444,0.095412,34.712,0.67568,0.17077,0.71714,118.97,-0.72228,-0.04134,0.69037,188.32 |
| 10725 | | |
| 10726 | | > fitmap #4 inMap #1 |
| 10727 | | |
| 10728 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10729 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10730 | | average map value = 0.07641, steps = 92 |
| 10731 | | shifted from previous position = 3.26 |
| 10732 | | rotated from previous position = 3.05 degrees |
| 10733 | | atoms outside contour = 1719, contour level = 0.062298 |
| 10734 | | |
| 10735 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10736 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10737 | | Matrix rotation and translation |
| 10738 | | 0.43947725 0.48218228 0.75786541 152.14974633 |
| 10739 | | 0.56472224 0.50780183 -0.65055828 129.18393323 |
| 10740 | | -0.69853313 0.71388902 -0.04913171 135.95848325 |
| 10741 | | Axis 0.68311005 0.72914540 0.04132360 |
| 10742 | | Axis point 98.67273539 0.00000000 55.86785771 |
| 10743 | | Rotation angle (degrees) 92.91912556 |
| 10744 | | Shift along axis 203.74718611 |
| 10745 | | |
| 10746 | | |
| 10747 | | > view matrix models |
| 10748 | | > #4,0.17782,-0.98266,0.052488,35.118,0.68291,0.16163,0.7124,116.24,-0.70853,-0.090831,0.69981,185.93 |
| 10749 | | |
| 10750 | | > fitmap #4 inMap #1 |
| 10751 | | |
| 10752 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10753 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10754 | | average map value = 0.08342, steps = 84 |
| 10755 | | shifted from previous position = 6.3 |
| 10756 | | rotated from previous position = 12 degrees |
| 10757 | | atoms outside contour = 1563, contour level = 0.062298 |
| 10758 | | |
| 10759 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10760 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10761 | | Matrix rotation and translation |
| 10762 | | 0.55190331 0.54205099 0.63370612 147.46570279 |
| 10763 | | 0.54932082 0.33543433 -0.76533028 129.46286977 |
| 10764 | | -0.62741483 0.77049629 -0.11263258 131.22663649 |
| 10765 | | Axis 0.77283235 0.63459969 0.00365820 |
| 10766 | | Axis point 0.00000000 -71.21629377 67.97889337 |
| 10767 | | Rotation angle (degrees) 96.46795334 |
| 10768 | | Shift along axis 196.60341691 |
| 10769 | | |
| 10770 | | |
| 10771 | | > view matrix models |
| 10772 | | > #4,0.085562,-0.97627,0.19894,42.41,0.75784,0.19339,0.62312,117.62,-0.64681,0.097448,0.7564,184.95 |
| 10773 | | |
| 10774 | | > fitmap #4 inMap #1 |
| 10775 | | |
| 10776 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10777 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10778 | | average map value = 0.08342, steps = 76 |
| 10779 | | shifted from previous position = 2.56 |
| 10780 | | rotated from previous position = 0.0154 degrees |
| 10781 | | atoms outside contour = 1563, contour level = 0.062298 |
| 10782 | | |
| 10783 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10784 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10785 | | Matrix rotation and translation |
| 10786 | | 0.55207988 0.54189540 0.63368539 147.46615335 |
| 10787 | | 0.54920583 0.33550155 -0.76538334 129.46165405 |
| 10788 | | -0.62736014 0.77057646 -0.11238845 131.22471157 |
| 10789 | | Axis 0.77287790 0.63454410 0.00367853 |
| 10790 | | Axis point 0.00000000 -71.21897751 67.98149139 |
| 10791 | | Rotation angle (degrees) 96.45388603 |
| 10792 | | Shift along axis 196.60517390 |
| 10793 | | |
| 10794 | | |
| 10795 | | > fitmap #4 inMap #1 |
| 10796 | | |
| 10797 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10798 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10799 | | average map value = 0.08342, steps = 44 |
| 10800 | | shifted from previous position = 0.0102 |
| 10801 | | rotated from previous position = 0.0157 degrees |
| 10802 | | atoms outside contour = 1562, contour level = 0.062298 |
| 10803 | | |
| 10804 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10805 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10806 | | Matrix rotation and translation |
| 10807 | | 0.55222371 0.54184267 0.63360516 147.46638743 |
| 10808 | | 0.54927112 0.33527159 -0.76543725 129.46483195 |
| 10809 | | -0.62717637 0.77071361 -0.11247361 131.21500895 |
| 10810 | | Axis 0.77298159 0.63441744 0.00373795 |
| 10811 | | Axis point 0.00000000 -71.16825226 67.98339546 |
| 10812 | | Rotation angle (degrees) 96.45882471 |
| 10813 | | Shift along axis 196.61402558 |
| 10814 | | |
| 10815 | | |
| 10816 | | > view matrix models |
| 10817 | | > #4,0.085272,-0.97631,0.19889,41.383,0.75804,0.19312,0.62296,109.75,-0.64661,0.097645,0.75654,190.86 |
| 10818 | | |
| 10819 | | > fitmap #4 inMap #1 |
| 10820 | | |
| 10821 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10822 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10823 | | average map value = 0.08124, steps = 212 |
| 10824 | | shifted from previous position = 5.39 |
| 10825 | | rotated from previous position = 17.6 degrees |
| 10826 | | atoms outside contour = 1675, contour level = 0.062298 |
| 10827 | | |
| 10828 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10829 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10830 | | Matrix rotation and translation |
| 10831 | | 0.66355925 0.45633933 0.59282673 137.33368869 |
| 10832 | | 0.63813200 0.06835389 -0.76688675 125.41737921 |
| 10833 | | -0.39048260 0.88717651 -0.24584788 131.41892520 |
| 10834 | | Axis 0.85576826 0.50873805 0.09405469 |
| 10835 | | Axis point 0.00000000 -28.96438758 70.23719256 |
| 10836 | | Rotation angle (degrees) 104.89019244 |
| 10837 | | Shift along axis 193.69097023 |
| 10838 | | |
| 10839 | | |
| 10840 | | > fitmap #4 inMap #1 |
| 10841 | | |
| 10842 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10843 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10844 | | average map value = 0.08124, steps = 212 |
| 10845 | | shifted from previous position = 5.39 |
| 10846 | | rotated from previous position = 17.6 degrees |
| 10847 | | atoms outside contour = 1675, contour level = 0.062298 |
| 10848 | | |
| 10849 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10850 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10851 | | Matrix rotation and translation |
| 10852 | | 0.66355925 0.45633933 0.59282673 137.33368869 |
| 10853 | | 0.63813200 0.06835389 -0.76688675 125.41737921 |
| 10854 | | -0.39048260 0.88717651 -0.24584788 131.41892520 |
| 10855 | | Axis 0.85576826 0.50873805 0.09405469 |
| 10856 | | Axis point -0.00000000 -28.96438758 70.23719256 |
| 10857 | | Rotation angle (degrees) 104.89019244 |
| 10858 | | Shift along axis 193.69097023 |
| 10859 | | |
| 10860 | | |
| 10861 | | > view matrix models |
| 10862 | | > #4,-0.18886,-0.92684,0.3245,48.622,0.76673,0.067292,0.63843,111.67,-0.61356,0.36938,0.69793,186.35 |
| 10863 | | |
| 10864 | | > fitmap #4 inMap #1 |
| 10865 | | |
| 10866 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10867 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10868 | | average map value = 0.08254, steps = 144 |
| 10869 | | shifted from previous position = 1.43 |
| 10870 | | rotated from previous position = 9.63 degrees |
| 10871 | | atoms outside contour = 1635, contour level = 0.062298 |
| 10872 | | |
| 10873 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10874 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10875 | | Matrix rotation and translation |
| 10876 | | 0.53742675 0.55455906 0.63532411 141.91537950 |
| 10877 | | 0.68859647 0.14633811 -0.71022535 126.56285973 |
| 10878 | | -0.48683404 0.81917605 -0.30322140 128.58563295 |
| 10879 | | Axis 0.80424958 0.59009703 0.07048478 |
| 10880 | | Axis point -0.00000000 -40.52195435 62.49381094 |
| 10881 | | Rotation angle (degrees) 108.04285568 |
| 10882 | | Shift along axis 197.88308283 |
| 10883 | | |
| 10884 | | |
| 10885 | | > view matrix models |
| 10886 | | > #4,-0.085998,-0.93922,0.33238,48.151,0.68938,0.18476,0.70044,116.96,-0.71927,0.28938,0.63159,182.54 |
| 10887 | | |
| 10888 | | > fitmap #4 inMap #1 |
| 10889 | | |
| 10890 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10891 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10892 | | average map value = 0.07839, steps = 84 |
| 10893 | | shifted from previous position = 3.44 |
| 10894 | | rotated from previous position = 8.08 degrees |
| 10895 | | atoms outside contour = 1777, contour level = 0.062298 |
| 10896 | | |
| 10897 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10898 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10899 | | Matrix rotation and translation |
| 10900 | | 0.54545453 0.64866013 0.53077244 143.33102395 |
| 10901 | | 0.63606855 0.09202339 -0.76612563 130.76090915 |
| 10902 | | -0.54579863 0.75549436 -0.36239773 121.54276523 |
| 10903 | | Axis 0.81632030 0.57755999 -0.00675514 |
| 10904 | | Axis point 0.00000000 -36.79158287 69.76077950 |
| 10905 | | Rotation angle (degrees) 111.25134437 |
| 10906 | | Shift along axis 191.70525457 |
| 10907 | | |
| 10908 | | |
| 10909 | | > view matrix models |
| 10910 | | > #4,-0.017284,-0.89645,0.4428,49.531,0.71992,0.29617,0.6277,102.87,-0.69385,0.32963,0.64025,190.84 |
| 10911 | | |
| 10912 | | > fitmap #4 inMap #1 |
| 10913 | | |
| 10914 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10915 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10916 | | average map value = 0.07762, steps = 116 |
| 10917 | | shifted from previous position = 3.61 |
| 10918 | | rotated from previous position = 9.07 degrees |
| 10919 | | atoms outside contour = 1691, contour level = 0.062298 |
| 10920 | | |
| 10921 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10922 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10923 | | Matrix rotation and translation |
| 10924 | | 0.57075249 0.70825106 0.41547806 130.74023960 |
| 10925 | | 0.62323468 -0.04421329 -0.78078403 120.77740139 |
| 10926 | | -0.53462147 0.70457477 -0.46664147 129.33350448 |
| 10927 | | Axis 0.84143036 0.53821513 -0.04816033 |
| 10928 | | Axis point 0.00000000 -30.46884941 79.08860481 |
| 10929 | | Rotation angle (degrees) 118.03761589 |
| 10930 | | Shift along axis 168.78428870 |
| 10931 | | |
| 10932 | | |
| 10933 | | > view matrix models |
| 10934 | | > #4,-0.029992,-0.81653,0.57652,50.254,0.73865,0.37048,0.56315,95.688,-0.67342,0.44274,0.59202,185.59 |
| 10935 | | |
| 10936 | | > fitmap #4 inMap #1 |
| 10937 | | |
| 10938 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10939 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10940 | | average map value = 0.07608, steps = 76 |
| 10941 | | shifted from previous position = 0.177 |
| 10942 | | rotated from previous position = 3.12 degrees |
| 10943 | | atoms outside contour = 1721, contour level = 0.062298 |
| 10944 | | |
| 10945 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10946 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10947 | | Matrix rotation and translation |
| 10948 | | 0.58794003 0.71679714 0.37487114 125.45196613 |
| 10949 | | 0.58185409 -0.05281655 -0.81157638 127.39061534 |
| 10950 | | -0.56193623 0.69527855 -0.44812432 132.68890543 |
| 10951 | | Axis 0.84681108 0.52646002 -0.07583429 |
| 10952 | | Axis point 0.00000000 -27.62504382 86.91299944 |
| 10953 | | Rotation angle (degrees) 117.16151555 |
| 10954 | | Shift along axis 163.23781217 |
| 10955 | | |
| 10956 | | |
| 10957 | | > view matrix models |
| 10958 | | > #4,0.0044226,-0.80815,0.58896,49.993,0.76509,0.38198,0.5184,95.114,-0.64391,0.44831,0.61999,185.87 |
| 10959 | | |
| 10960 | | > ui mousemode right "rotate selected models" |
| 10961 | | |
| 10962 | | > view matrix models |
| 10963 | | > #4,-0.21903,-0.028832,-0.97529,49.53,-0.40449,-0.90694,0.11765,97.264,-0.88793,0.42027,0.18698,186.11 |
| 10964 | | |
| 10965 | | > view matrix models |
| 10966 | | > #4,-0.11406,-0.16392,-0.97986,48.364,-0.0084608,-0.9861,0.16595,94.522,-0.99344,0.027219,0.11109,185.25 |
| 10967 | | |
| 10968 | | > fitmap #4 inMap #1 |
| 10969 | | |
| 10970 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 10971 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 10972 | | average map value = 0.08118, steps = 84 |
| 10973 | | shifted from previous position = 4.55 |
| 10974 | | rotated from previous position = 9.74 degrees |
| 10975 | | atoms outside contour = 1612, contour level = 0.062298 |
| 10976 | | |
| 10977 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 10978 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 10979 | | Matrix rotation and translation |
| 10980 | | -0.22456071 -0.89023468 0.39630127 128.03291960 |
| 10981 | | 0.94092998 -0.09232689 0.32577063 126.72475044 |
| 10982 | | -0.25342305 0.44604703 0.85838150 130.58550439 |
| 10983 | | Axis 0.06178370 0.33375100 0.94063439 |
| 10984 | | Axis point 30.69668229 89.58540740 0.00000000 |
| 10985 | | Rotation angle (degrees) 103.25309980 |
| 10986 | | Shift along axis 173.03807442 |
| 10987 | | |
| 10988 | | |
| 10989 | | > view matrix models |
| 10990 | | > #4,-0.89291,0.37374,-0.25107,59.724,0.32538,0.92107,0.2139,102.79,0.3112,0.1093,-0.94404,174.17 |
| 10991 | | |
| 10992 | | > view matrix models |
| 10993 | | > #4,-0.024559,-0.98801,-0.15244,49.64,-0.99142,0.0044861,0.13065,108.12,-0.1284,0.15434,-0.97964,177.12 |
| 10994 | | |
| 10995 | | > view matrix models |
| 10996 | | > #4,-0.14193,0.98599,0.087649,57.848,0.87487,0.083525,0.47711,97.086,0.4631,0.1444,-0.87446,173.49 |
| 10997 | | |
| 10998 | | > fitmap #4 inMap #1 |
| 10999 | | |
| 11000 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11001 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11002 | | average map value = 0.0793, steps = 80 |
| 11003 | | shifted from previous position = 1.64 |
| 11004 | | rotated from previous position = 10.4 degrees |
| 11005 | | atoms outside contour = 1692, contour level = 0.062298 |
| 11006 | | |
| 11007 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11008 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11009 | | Matrix rotation and translation |
| 11010 | | 0.85743618 -0.32587566 0.39825650 121.20427802 |
| 11011 | | -0.51398196 -0.50472714 0.69359430 136.18877019 |
| 11012 | | -0.02501464 -0.79940951 -0.60026552 120.71672997 |
| 11013 | | Axis -0.95509288 0.27077175 -0.12033391 |
| 11014 | | Axis point 0.00000000 112.86215130 12.03117295 |
| 11015 | | Rotation angle (degrees) 128.59256955 |
| 11016 | | Shift along axis -93.41158772 |
| 11017 | | |
| 11018 | | |
| 11019 | | > view matrix models |
| 11020 | | > #4,-0.8621,0.07718,0.50082,61.074,-0.10518,0.93955,-0.32585,102.57,-0.4957,-0.33359,-0.80187,178.02 |
| 11021 | | |
| 11022 | | > ui mousemode right "translate selected models" |
| 11023 | | |
| 11024 | | > view matrix models |
| 11025 | | > #4,-0.8621,0.07718,0.50082,63.397,-0.10518,0.93955,-0.32585,108.42,-0.4957,-0.33359,-0.80187,179.26 |
| 11026 | | |
| 11027 | | > fitmap #4 inMap #1 |
| 11028 | | |
| 11029 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11030 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11031 | | average map value = 0.08407, steps = 88 |
| 11032 | | shifted from previous position = 3.4 |
| 11033 | | rotated from previous position = 5.5 degrees |
| 11034 | | atoms outside contour = 1530, contour level = 0.062298 |
| 11035 | | |
| 11036 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11037 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11038 | | Matrix rotation and translation |
| 11039 | | 0.06625757 0.78145397 -0.62043503 130.09764942 |
| 11040 | | 0.77830899 0.34861633 0.52220855 125.41503612 |
| 11041 | | 0.62437572 -0.51749043 -0.58511418 114.97972106 |
| 11042 | | Axis -0.64104033 -0.76750474 -0.00193908 |
| 11043 | | Axis point -25.53121263 0.00000000 62.26040788 |
| 11044 | | Rotation angle (degrees) 125.81147789 |
| 11045 | | Shift along axis -179.87743022 |
| 11046 | | |
| 11047 | | |
| 11048 | | > ui mousemode right "rotate selected models" |
| 11049 | | |
| 11050 | | > view matrix models |
| 11051 | | > #4,-0.78757,0.61108,0.079465,64.181,-0.22507,-0.4053,0.88604,105.94,0.57365,0.67994,0.45674,181.84 |
| 11052 | | |
| 11053 | | > ui mousemode right "translate selected models" |
| 11054 | | |
| 11055 | | > view matrix models |
| 11056 | | > #4,-0.78757,0.61108,0.079465,59.003,-0.22507,-0.4053,0.88604,123.45,0.57365,0.67994,0.45674,182.75 |
| 11057 | | |
| 11058 | | > fitmap #4 inMap #1 |
| 11059 | | |
| 11060 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11061 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11062 | | average map value = 0.07603, steps = 76 |
| 11063 | | shifted from previous position = 2.01 |
| 11064 | | rotated from previous position = 5.81 degrees |
| 11065 | | atoms outside contour = 1734, contour level = 0.062298 |
| 11066 | | |
| 11067 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11068 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11069 | | Matrix rotation and translation |
| 11070 | | 0.13509188 -0.44717019 0.88418833 149.54084829 |
| 11071 | | -0.08698400 -0.89427557 -0.43898175 126.59468093 |
| 11072 | | 0.98700758 -0.01760736 -0.15970602 114.09299963 |
| 11073 | | Axis 0.74739235 -0.18237065 0.63886276 |
| 11074 | | Axis point 0.00000000 80.49554200 8.15354540 |
| 11075 | | Rotation angle (degrees) 163.62658104 |
| 11076 | | Shift along axis 161.56830004 |
| 11077 | | |
| 11078 | | |
| 11079 | | > view matrix models |
| 11080 | | > #4,-0.78757,0.61108,0.079465,65.525,-0.22507,-0.4053,0.88604,120.28,0.57365,0.67994,0.45674,182.12 |
| 11081 | | |
| 11082 | | > fitmap #4 inMap #1 |
| 11083 | | |
| 11084 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11085 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11086 | | average map value = 0.07967, steps = 176 |
| 11087 | | shifted from previous position = 6.85 |
| 11088 | | rotated from previous position = 12.7 degrees |
| 11089 | | atoms outside contour = 1645, contour level = 0.062298 |
| 11090 | | |
| 11091 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11092 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11093 | | Matrix rotation and translation |
| 11094 | | 0.16517157 -0.64502329 0.74609872 137.74965639 |
| 11095 | | -0.14879877 -0.76412760 -0.62766864 125.21606224 |
| 11096 | | 0.97497552 -0.00734556 -0.22219083 114.55128814 |
| 11097 | | Axis 0.75036540 -0.27685772 0.60025125 |
| 11098 | | Axis point 0.00000000 83.40089398 25.71698856 |
| 11099 | | Rotation angle (degrees) 155.58471623 |
| 11100 | | Shift along axis 137.45509752 |
| 11101 | | |
| 11102 | | |
| 11103 | | > view matrix models |
| 11104 | | > #4,-0.80197,0.56631,0.19012,67.937,-0.23574,-0.59246,0.77034,114.94,0.54888,0.57297,0.60863,182.05 |
| 11105 | | |
| 11106 | | > fitmap #4 inMap #1 |
| 11107 | | |
| 11108 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11109 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11110 | | average map value = 0.07967, steps = 204 |
| 11111 | | shifted from previous position = 6.47 |
| 11112 | | rotated from previous position = 0.00461 degrees |
| 11113 | | atoms outside contour = 1645, contour level = 0.062298 |
| 11114 | | |
| 11115 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11116 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11117 | | Matrix rotation and translation |
| 11118 | | 0.16516771 -0.64508277 0.74604814 137.74931590 |
| 11119 | | -0.14882998 -0.76407730 -0.62772248 125.21736097 |
| 11120 | | 0.97497141 -0.00735484 -0.22220856 114.55158291 |
| 11121 | | Axis 0.75036187 -0.27689273 0.60023952 |
| 11122 | | Axis point 0.00000000 83.40355349 25.72079424 |
| 11123 | | Rotation angle (degrees) 155.58272588 |
| 11124 | | Shift along axis 137.44844377 |
| 11125 | | |
| 11126 | | |
| 11127 | | > ui mousemode right "rotate selected models" |
| 11128 | | |
| 11129 | | > view matrix models |
| 11130 | | > #4,-0.4514,0.88991,-0.065511,59.621,-0.75197,-0.4189,-0.50898,114.04,-0.48039,-0.18049,0.85828,187.52 |
| 11131 | | |
| 11132 | | > fitmap #4 inMap #1 |
| 11133 | | |
| 11134 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11135 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11136 | | average map value = 0.07937, steps = 88 |
| 11137 | | shifted from previous position = 1.27 |
| 11138 | | rotated from previous position = 7.04 degrees |
| 11139 | | atoms outside contour = 1658, contour level = 0.062298 |
| 11140 | | |
| 11141 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11142 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11143 | | Matrix rotation and translation |
| 11144 | | -0.63212989 -0.74994373 -0.19492613 140.22038760 |
| 11145 | | 0.53731909 -0.24299162 -0.80761578 122.79162791 |
| 11146 | | 0.55830098 -0.61525561 0.55656136 118.34133854 |
| 11147 | | Axis 0.12791650 -0.50088420 0.85600957 |
| 11148 | | Axis point 21.11282470 131.17845088 0.00000000 |
| 11149 | | Rotation angle (degrees) 131.24499083 |
| 11150 | | Shift along axis 57.73343264 |
| 11151 | | |
| 11152 | | |
| 11153 | | > view matrix models |
| 11154 | | > #4,-0.70545,0.64992,0.28275,60.333,-0.37914,-0.0089826,-0.9253,111.74,-0.59883,-0.75995,0.25275,184.16 |
| 11155 | | |
| 11156 | | > fitmap #4 inMap #1 |
| 11157 | | |
| 11158 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11159 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11160 | | average map value = 0.08086, steps = 76 |
| 11161 | | shifted from previous position = 4.42 |
| 11162 | | rotated from previous position = 6.71 degrees |
| 11163 | | atoms outside contour = 1672, contour level = 0.062298 |
| 11164 | | |
| 11165 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11166 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11167 | | Matrix rotation and translation |
| 11168 | | -0.14361636 -0.45460942 -0.87903618 140.33207241 |
| 11169 | | 0.81563440 0.44866597 -0.36529353 124.03183522 |
| 11170 | | 0.56045950 -0.76943428 0.30635931 117.81124738 |
| 11171 | | Axis -0.20599604 -0.73373052 0.64746054 |
| 11172 | | Axis point -28.99873844 0.00000000 187.14443661 |
| 11173 | | Rotation angle (degrees) 101.20357411 |
| 11174 | | Shift along axis -43.63565927 |
| 11175 | | |
| 11176 | | |
| 11177 | | > view matrix models |
| 11178 | | > #4,-0.43792,0.87782,0.19406,59.083,-0.55014,-0.090942,-0.8301,112.86,-0.71104,-0.47028,0.52275,186.68 |
| 11179 | | |
| 11180 | | > view matrix models |
| 11181 | | > #4,-0.9615,0.1176,0.24837,60.108,-0.20768,0.28094,-0.93698,111.56,-0.17997,-0.95249,-0.2457,179.27 |
| 11182 | | |
| 11183 | | > view matrix models |
| 11184 | | > #4,0.13872,-0.67929,-0.72064,47.283,-0.80178,0.35008,-0.48434,117.04,0.58129,0.64498,-0.49608,178.96 |
| 11185 | | |
| 11186 | | > fitmap #4 inMap #1 |
| 11187 | | |
| 11188 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11189 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11190 | | average map value = 0.08362, steps = 108 |
| 11191 | | shifted from previous position = 3.79 |
| 11192 | | rotated from previous position = 4.97 degrees |
| 11193 | | atoms outside contour = 1580, contour level = 0.062298 |
| 11194 | | |
| 11195 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11196 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11197 | | Matrix rotation and translation |
| 11198 | | -0.66072109 0.70499110 -0.25775022 141.82866645 |
| 11199 | | -0.55636088 -0.22943611 0.79863736 133.42945166 |
| 11200 | | 0.50389503 0.67107869 0.54382275 122.17884840 |
| 11201 | | Axis -0.08624770 -0.51497988 -0.85285230 |
| 11202 | | Axis point 74.60419648 -2.78507571 0.00000000 |
| 11203 | | Rotation angle (degrees) 132.31198604 |
| 11204 | | Shift along axis -185.14639187 |
| 11205 | | |
| 11206 | | |
| 11207 | | > ui mousemode right translate |
| 11208 | | |
| 11209 | | > ui mousemode right "translate selected models" |
| 11210 | | |
| 11211 | | > view matrix models |
| 11212 | | > #4,0.058524,-0.70748,-0.70431,50.931,-0.80876,0.37999,-0.4489,116.26,0.58521,0.59589,-0.54994,175.38 |
| 11213 | | |
| 11214 | | > fitmap #4 inMap #1 |
| 11215 | | |
| 11216 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11217 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11218 | | average map value = 0.08215, steps = 132 |
| 11219 | | shifted from previous position = 4.8 |
| 11220 | | rotated from previous position = 11 degrees |
| 11221 | | atoms outside contour = 1582, contour level = 0.062298 |
| 11222 | | |
| 11223 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11224 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11225 | | Matrix rotation and translation |
| 11226 | | -0.60024199 0.67047964 -0.43608095 138.59558179 |
| 11227 | | -0.67225481 -0.12752339 0.72925389 133.43951414 |
| 11228 | | 0.43333937 0.73088633 0.52727806 119.00635146 |
| 11229 | | Axis 0.00102051 -0.54351190 -0.83940084 |
| 11230 | | Axis point 81.22052355 -13.12329259 0.00000000 |
| 11231 | | Rotation angle (degrees) 126.88735061 |
| 11232 | | Shift along axis -172.27855751 |
| 11233 | | |
| 11234 | | |
| 11235 | | > ui mousemode right "rotate selected models" |
| 11236 | | |
| 11237 | | > view matrix models |
| 11238 | | > #4,0.10997,-0.8696,-0.48135,54.334,-0.68573,0.28419,-0.67008,112.26,0.7195,0.40377,-0.56506,176.22 |
| 11239 | | |
| 11240 | | > ui mousemode right pivot |
| 11241 | | |
| 11242 | | > select add #1 |
| 11243 | | |
| 11244 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 11245 | | |
| 11246 | | > fitmap #4 inMap #1 |
| 11247 | | |
| 11248 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11249 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11250 | | average map value = 0.08296, steps = 96 |
| 11251 | | shifted from previous position = 3.94 |
| 11252 | | rotated from previous position = 10.1 degrees |
| 11253 | | atoms outside contour = 1591, contour level = 0.062298 |
| 11254 | | |
| 11255 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11256 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11257 | | Matrix rotation and translation |
| 11258 | | -0.45747505 0.75810220 -0.46475545 134.73248360 |
| 11259 | | -0.73458333 -0.02766191 0.67795437 133.62083479 |
| 11260 | | 0.50110268 0.65154882 0.56954388 120.54628112 |
| 11261 | | Axis -0.01485032 -0.54319247 -0.83947686 |
| 11262 | | Axis point 80.15373881 -20.18203232 0.00000000 |
| 11263 | | Rotation angle (degrees) 117.24501360 |
| 11264 | | Shift along axis -175.77846581 |
| 11265 | | |
| 11266 | | |
| 11267 | | > select subtract #1 |
| 11268 | | |
| 11269 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 11270 | | |
| 11271 | | > ui mousemode right "translate selected atoms" |
| 11272 | | |
| 11273 | | > fitmap #4 inMap #1 |
| 11274 | | |
| 11275 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11276 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11277 | | average map value = 0.08212, steps = 128 |
| 11278 | | shifted from previous position = 3.33 |
| 11279 | | rotated from previous position = 6.26 degrees |
| 11280 | | atoms outside contour = 1571, contour level = 0.062298 |
| 11281 | | |
| 11282 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11283 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11284 | | Matrix rotation and translation |
| 11285 | | -0.52472750 0.76224947 -0.37899443 134.40894214 |
| 11286 | | -0.68471174 -0.11339376 0.71993866 132.08838040 |
| 11287 | | 0.50579727 0.63727356 0.58142199 123.58871671 |
| 11288 | | Axis -0.04868227 -0.52106224 -0.85212920 |
| 11289 | | Axis point 76.04143853 -12.68666525 0.00000000 |
| 11290 | | Rotation angle (degrees) 121.89401414 |
| 11291 | | Shift along axis -180.68315381 |
| 11292 | | |
| 11293 | | |
| 11294 | | > fitmap #4 inMap #1 |
| 11295 | | |
| 11296 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11297 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11298 | | average map value = 0.08269, steps = 132 |
| 11299 | | shifted from previous position = 2.25 |
| 11300 | | rotated from previous position = 10.7 degrees |
| 11301 | | atoms outside contour = 1569, contour level = 0.062298 |
| 11302 | | |
| 11303 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11304 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11305 | | Matrix rotation and translation |
| 11306 | | -0.56257157 0.78473709 -0.26019400 136.51656171 |
| 11307 | | -0.69341610 -0.27648550 0.66537949 132.02889576 |
| 11308 | | 0.45020810 0.55474630 0.69969222 125.34374865 |
| 11309 | | Axis -0.06730619 -0.43218909 -0.89926774 |
| 11310 | | Axis point 79.48624824 -0.34150644 0.00000000 |
| 11311 | | Rotation angle (degrees) 124.72808325 |
| 11312 | | Shift along axis -178.96744784 |
| 11313 | | |
| 11314 | | |
| 11315 | | > fitmap #4 inMap #1 |
| 11316 | | |
| 11317 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11318 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11319 | | average map value = 0.08362, steps = 136 |
| 11320 | | shifted from previous position = 4.8 |
| 11321 | | rotated from previous position = 12.6 degrees |
| 11322 | | atoms outside contour = 1582, contour level = 0.062298 |
| 11323 | | |
| 11324 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11325 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11326 | | Matrix rotation and translation |
| 11327 | | -0.66064781 0.70498044 -0.25796711 133.98844179 |
| 11328 | | -0.55631654 -0.22904177 0.79878142 136.42980542 |
| 11329 | | 0.50404004 0.67122458 0.54350823 126.57678781 |
| 11330 | | Axis -0.08623834 -0.51517605 -0.85273477 |
| 11331 | | Axis point 70.61422172 -0.50647851 0.00000000 |
| 11332 | | Rotation angle (degrees) 132.30605555 |
| 11333 | | Shift along axis -189.77673695 |
| 11334 | | |
| 11335 | | |
| 11336 | | > fitmap #4 inMap #1 |
| 11337 | | |
| 11338 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11339 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11340 | | average map value = 0.08362, steps = 68 |
| 11341 | | shifted from previous position = 2.78 |
| 11342 | | rotated from previous position = 0.0348 degrees |
| 11343 | | atoms outside contour = 1580, contour level = 0.062298 |
| 11344 | | |
| 11345 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11346 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11347 | | Matrix rotation and translation |
| 11348 | | -0.66082393 0.70491457 -0.25769590 136.00761488 |
| 11349 | | -0.55635604 -0.22961695 0.79858876 134.64290718 |
| 11350 | | 0.50376551 0.67109724 0.54391985 125.89473682 |
| 11351 | | Axis -0.08621220 -0.51491472 -0.85289524 |
| 11352 | | Axis point 71.38599146 -1.70669420 0.00000000 |
| 11353 | | Rotation angle (degrees) 132.31921455 |
| 11354 | | Shift along axis -188.43015241 |
| 11355 | | |
| 11356 | | |
| 11357 | | > fitmap #4 inMap #1 |
| 11358 | | |
| 11359 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11360 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11361 | | average map value = 0.07923, steps = 92 |
| 11362 | | shifted from previous position = 0.861 |
| 11363 | | rotated from previous position = 11.1 degrees |
| 11364 | | atoms outside contour = 1652, contour level = 0.062298 |
| 11365 | | |
| 11366 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11367 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11368 | | Matrix rotation and translation |
| 11369 | | -0.51176194 0.80636079 -0.29644896 135.49389483 |
| 11370 | | -0.60292665 -0.09127669 0.79255789 134.50337405 |
| 11371 | | 0.61202873 0.58433794 0.53288834 126.94001116 |
| 11372 | | Axis -0.12323559 -0.53768519 -0.83409090 |
| 11373 | | Axis point 68.17063720 -10.43923993 0.00000000 |
| 11374 | | Rotation angle (degrees) 122.34900744 |
| 11375 | | Shift along axis -194.89764975 |
| 11376 | | |
| 11377 | | |
| 11378 | | > fitmap #4 inMap #1 |
| 11379 | | |
| 11380 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11381 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11382 | | average map value = 0.07821, steps = 144 |
| 11383 | | shifted from previous position = 3.55 |
| 11384 | | rotated from previous position = 9.12 degrees |
| 11385 | | atoms outside contour = 1626, contour level = 0.062298 |
| 11386 | | |
| 11387 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11388 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11389 | | Matrix rotation and translation |
| 11390 | | -0.64175773 0.74899572 -0.16477993 133.42011846 |
| 11391 | | -0.45029336 -0.19408435 0.87153149 134.65326694 |
| 11392 | | 0.62079215 0.63351138 0.46182293 125.52478351 |
| 11393 | | Axis -0.16377943 -0.54054487 -0.82521969 |
| 11394 | | Axis point 61.43194821 -0.13200507 0.00000000 |
| 11395 | | Rotation angle (degrees) 133.39385466 |
| 11396 | | Shift along axis -198.22312698 |
| 11397 | | |
| 11398 | | |
| 11399 | | > fitmap #4 inMap #1 |
| 11400 | | |
| 11401 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11402 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11403 | | average map value = 0.07639, steps = 104 |
| 11404 | | shifted from previous position = 5.37 |
| 11405 | | rotated from previous position = 17.6 degrees |
| 11406 | | atoms outside contour = 1720, contour level = 0.062298 |
| 11407 | | |
| 11408 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11409 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11410 | | Matrix rotation and translation |
| 11411 | | -0.60297812 0.78599905 0.13646567 139.55156402 |
| 11412 | | -0.29573378 -0.37910648 0.87682370 141.40574782 |
| 11413 | | 0.74091761 0.48834800 0.46103939 131.10748325 |
| 11414 | | Axis -0.29914435 -0.46545609 -0.83298456 |
| 11415 | | Axis point 55.20137465 17.53433377 0.00000000 |
| 11416 | | Rotation angle (degrees) 139.51029172 |
| 11417 | | Shift along axis -216.77473842 |
| 11418 | | |
| 11419 | | |
| 11420 | | > fitmap #4 inMap #1 |
| 11421 | | |
| 11422 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11423 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11424 | | average map value = 0.08017, steps = 116 |
| 11425 | | shifted from previous position = 4.22 |
| 11426 | | rotated from previous position = 11 degrees |
| 11427 | | atoms outside contour = 1629, contour level = 0.062298 |
| 11428 | | |
| 11429 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11430 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11431 | | Matrix rotation and translation |
| 11432 | | -0.51885045 0.84509606 -0.12886758 130.65694392 |
| 11433 | | -0.39739709 -0.10497150 0.91162302 133.04782020 |
| 11434 | | 0.75688160 0.52420762 0.39030323 125.15683927 |
| 11435 | | Axis -0.24608686 -0.56262924 -0.78923355 |
| 11436 | | Axis point 51.14174596 -2.76734763 0.00000000 |
| 11437 | | Rotation angle (degrees) 128.07987016 |
| 11438 | | Shift along axis -205.78752697 |
| 11439 | | |
| 11440 | | |
| 11441 | | > ui mousemode right "translate selected models" |
| 11442 | | |
| 11443 | | > view matrix models |
| 11444 | | > #4,-0.2703,-0.68955,-0.67191,52.041,-0.7782,0.56739,-0.26921,104.38,0.56687,0.45011,-0.68997,179.89 |
| 11445 | | |
| 11446 | | > view matrix models |
| 11447 | | > #4,-0.2703,-0.68955,-0.67191,36.624,-0.7782,0.56739,-0.26921,110.33,0.56687,0.45011,-0.68997,180.67 |
| 11448 | | |
| 11449 | | > fitmap #4 inMap #1 |
| 11450 | | |
| 11451 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11452 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11453 | | average map value = 0.07646, steps = 140 |
| 11454 | | shifted from previous position = 5.27 |
| 11455 | | rotated from previous position = 8.3 degrees |
| 11456 | | atoms outside contour = 1732, contour level = 0.062298 |
| 11457 | | |
| 11458 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11459 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11460 | | Matrix rotation and translation |
| 11461 | | -0.56775680 0.81094772 -0.14147792 139.05189616 |
| 11462 | | -0.48269975 -0.18874635 0.85520510 135.13507672 |
| 11463 | | 0.66682319 0.55383987 0.49860628 132.97542567 |
| 11464 | | Axis -0.19381721 -0.51984321 -0.83198433 |
| 11465 | | Axis point 61.80849713 -2.30539864 0.00000000 |
| 11466 | | Rotation angle (degrees) 128.97258232 |
| 11467 | | Shift along axis -207.83317370 |
| 11468 | | |
| 11469 | | |
| 11470 | | > view matrix models |
| 11471 | | > #4,-0.14139,-0.66568,-0.73272,43.502,-0.78774,0.52393,-0.32399,102.61,0.59956,0.53138,-0.59846,182.03 |
| 11472 | | |
| 11473 | | > fitmap #4 inMap #1 |
| 11474 | | |
| 11475 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11476 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11477 | | average map value = 0.07864, steps = 124 |
| 11478 | | shifted from previous position = 3.6 |
| 11479 | | rotated from previous position = 12.3 degrees |
| 11480 | | atoms outside contour = 1645, contour level = 0.062298 |
| 11481 | | |
| 11482 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11483 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11484 | | Matrix rotation and translation |
| 11485 | | -0.61217507 0.78805459 0.06489710 133.31061746 |
| 11486 | | -0.37992919 -0.36512632 0.84990386 136.72313460 |
| 11487 | | 0.69346628 0.49563366 0.52292618 132.59966598 |
| 11488 | | Axis -0.25804939 -0.45784796 -0.85075599 |
| 11489 | | Axis point 56.04314946 14.18919260 0.00000000 |
| 11490 | | Rotation angle (degrees) 136.65113664 |
| 11491 | | Shift along axis -209.80909199 |
| 11492 | | |
| 11493 | | |
| 11494 | | > view matrix models |
| 11495 | | > #4,-0.19212,-0.533,-0.82401,41.927,-0.83864,0.52525,-0.14421,114.48,0.50968,0.66335,-0.54791,184.95 |
| 11496 | | |
| 11497 | | > fitmap #4 inMap #1 |
| 11498 | | |
| 11499 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11500 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11501 | | average map value = 0.07085, steps = 88 |
| 11502 | | shifted from previous position = 2.13 |
| 11503 | | rotated from previous position = 8.56 degrees |
| 11504 | | atoms outside contour = 1837, contour level = 0.062298 |
| 11505 | | |
| 11506 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11507 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11508 | | Matrix rotation and translation |
| 11509 | | -0.54884185 0.82085951 0.15799453 147.71322257 |
| 11510 | | -0.28332860 -0.36048919 0.88869142 134.44420583 |
| 11511 | | 0.78644613 0.44298667 0.43042453 132.08224257 |
| 11512 | | Axis -0.33103053 -0.46675893 -0.82009444 |
| 11513 | | Axis point 54.69591644 11.96193141 0.00000000 |
| 11514 | | Rotation angle (degrees) 137.68486210 |
| 11515 | | Shift along axis -219.97053295 |
| 11516 | | |
| 11517 | | |
| 11518 | | > view matrix models |
| 11519 | | > #4,-0.33348,-0.50307,-0.79731,39.797,-0.81697,0.57626,-0.021898,103.16,0.47048,0.64408,-0.60317,176.17 |
| 11520 | | |
| 11521 | | > fitmap #4 inMap #1 |
| 11522 | | |
| 11523 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11524 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11525 | | average map value = 0.07864, steps = 100 |
| 11526 | | shifted from previous position = 3.22 |
| 11527 | | rotated from previous position = 8.53 degrees |
| 11528 | | atoms outside contour = 1646, contour level = 0.062298 |
| 11529 | | |
| 11530 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11531 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11532 | | Matrix rotation and translation |
| 11533 | | -0.61220429 0.78800765 0.06519080 133.32233880 |
| 11534 | | -0.37930893 -0.36502362 0.85022496 136.71827491 |
| 11535 | | 0.69377996 0.49578392 0.52236737 132.60678522 |
| 11536 | | Axis -0.25827058 -0.45803411 -0.85058866 |
| 11537 | | Axis point 56.00921771 14.17969405 0.00000000 |
| 11538 | | Rotation angle (degrees) 136.67139500 |
| 11539 | | Shift along axis -209.84869812 |
| 11540 | | |
| 11541 | | |
| 11542 | | > view matrix models |
| 11543 | | > #4,-0.19264,-0.53315,-0.82379,46.295,-0.83879,0.52514,-0.14372,109.82,0.50924,0.6633,-0.54837,173.51 |
| 11544 | | |
| 11545 | | > fitmap #4 inMap #1 |
| 11546 | | |
| 11547 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11548 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11549 | | average map value = 0.07874, steps = 76 |
| 11550 | | shifted from previous position = 1.53 |
| 11551 | | rotated from previous position = 10.6 degrees |
| 11552 | | atoms outside contour = 1608, contour level = 0.062298 |
| 11553 | | |
| 11554 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11555 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11556 | | Matrix rotation and translation |
| 11557 | | -0.60289809 0.79413978 0.07652385 136.68746371 |
| 11558 | | -0.24198772 -0.27342093 0.93095807 140.77478058 |
| 11559 | | 0.76023406 0.54275501 0.35701703 123.82301808 |
| 11560 | | Axis -0.29846577 -0.52566327 -0.79661553 |
| 11561 | | Axis point 51.77701818 12.60377529 0.00000000 |
| 11562 | | Rotation angle (degrees) 139.43344011 |
| 11563 | | Shift along axis -213.43600027 |
| 11564 | | |
| 11565 | | |
| 11566 | | > view matrix models |
| 11567 | | > #4,-0.31042,-0.61388,-0.7258,49.324,-0.85602,0.51253,-0.067386,112.19,0.41337,0.60038,-0.68459,170.43 |
| 11568 | | |
| 11569 | | > fitmap #4 inMap #1 |
| 11570 | | |
| 11571 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11572 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11573 | | average map value = 0.07555, steps = 120 |
| 11574 | | shifted from previous position = 2.65 |
| 11575 | | rotated from previous position = 5.9 degrees |
| 11576 | | atoms outside contour = 1713, contour level = 0.062298 |
| 11577 | | |
| 11578 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11579 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11580 | | Matrix rotation and translation |
| 11581 | | -0.52061114 0.85148061 0.06280771 138.17983551 |
| 11582 | | -0.25398717 -0.22468485 0.94074823 139.31828735 |
| 11583 | | 0.81514082 0.47381165 0.33323859 119.22099222 |
| 11584 | | Axis -0.32967215 -0.53117123 -0.78049561 |
| 11585 | | Axis point 50.92820165 10.98426105 0.00000000 |
| 11586 | | Rotation angle (degrees) 134.91271143 |
| 11587 | | Shift along axis -212.60737109 |
| 11588 | | |
| 11589 | | |
| 11590 | | > view matrix models |
| 11591 | | > #4,-0.37999,-0.59827,-0.70546,46.702,-0.80231,0.59272,-0.070504,109.52,0.46033,0.53921,-0.70523,170.3 |
| 11592 | | |
| 11593 | | > fitmap #4 inMap #1 |
| 11594 | | |
| 11595 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11596 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11597 | | average map value = 0.08118, steps = 116 |
| 11598 | | shifted from previous position = 1.37 |
| 11599 | | rotated from previous position = 12.7 degrees |
| 11600 | | atoms outside contour = 1635, contour level = 0.062298 |
| 11601 | | |
| 11602 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11603 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11604 | | Matrix rotation and translation |
| 11605 | | -0.59691409 0.77502686 0.20742935 137.41307815 |
| 11606 | | -0.05545499 -0.29777904 0.95302276 143.38885738 |
| 11607 | | 0.80038635 0.55736972 0.22072761 122.77044875 |
| 11608 | | Axis -0.36150574 -0.54178116 -0.75880615 |
| 11609 | | Axis point 44.15615841 16.54103842 0.00000000 |
| 11610 | | Rotation angle (degrees) 146.82286471 |
| 11611 | | Shift along axis -220.51996986 |
| 11612 | | |
| 11613 | | |
| 11614 | | > volume #1 step 1 |
| 11615 | | |
| 11616 | | > view matrix models |
| 11617 | | > #4,-0.42652,-0.60864,-0.66905,46.98,-0.86566,0.48909,0.10693,107.68,0.26214,0.62478,-0.73548,172.28 |
| 11618 | | |
| 11619 | | > fitmap #4 inMap #1 |
| 11620 | | |
| 11621 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11622 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11623 | | average map value = 0.07903, steps = 120 |
| 11624 | | shifted from previous position = 2.76 |
| 11625 | | rotated from previous position = 6.84 degrees |
| 11626 | | atoms outside contour = 1668, contour level = 0.062298 |
| 11627 | | |
| 11628 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11629 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11630 | | Matrix rotation and translation |
| 11631 | | -0.49990289 0.83053014 0.24559474 135.51122221 |
| 11632 | | -0.03286132 -0.30155482 0.95288237 138.32802104 |
| 11633 | | 0.86545781 0.46827809 0.17804044 125.68945152 |
| 11634 | | Axis -0.41485648 -0.53064783 -0.73912582 |
| 11635 | | Axis point 36.89776708 14.62478940 0.00000000 |
| 11636 | | Rotation angle (degrees) 144.26320732 |
| 11637 | | Shift along axis -222.52149208 |
| 11638 | | |
| 11639 | | |
| 11640 | | > view matrix models |
| 11641 | | > #4,-0.52473,-0.55297,-0.64722,47.17,-0.80232,0.57536,0.1589,110.53,0.28452,0.60265,-0.74556,170.91 |
| 11642 | | |
| 11643 | | > fitmap #4 inMap #1 |
| 11644 | | |
| 11645 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11646 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11647 | | average map value = 0.08118, steps = 88 |
| 11648 | | shifted from previous position = 1.66 |
| 11649 | | rotated from previous position = 6.84 degrees |
| 11650 | | atoms outside contour = 1647, contour level = 0.062298 |
| 11651 | | |
| 11652 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11653 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11654 | | Matrix rotation and translation |
| 11655 | | -0.59691494 0.77506158 0.20729713 137.41339972 |
| 11656 | | -0.05555353 -0.29768537 0.95304628 143.38632266 |
| 11657 | | 0.80037888 0.55737148 0.22075025 122.77073860 |
| 11658 | | Axis -0.36146732 -0.54180773 -0.75880548 |
| 11659 | | Axis point 44.15886968 16.53337593 0.00000000 |
| 11660 | | Rotation angle (degrees) 146.81682072 |
| 11661 | | Shift along axis -220.51738052 |
| 11662 | | |
| 11663 | | |
| 11664 | | > view matrix models |
| 11665 | | > #4,-0.42648,-0.6087,-0.66903,42.96,-0.86565,0.48912,0.1068,107.99,0.26223,0.6247,-0.73552,176.01 |
| 11666 | | |
| 11667 | | > fitmap #4 inMap #1 |
| 11668 | | |
| 11669 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11670 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11671 | | average map value = 0.08033, steps = 96 |
| 11672 | | shifted from previous position = 3.16 |
| 11673 | | rotated from previous position = 8.81 degrees |
| 11674 | | atoms outside contour = 1633, contour level = 0.062298 |
| 11675 | | |
| 11676 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11677 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11678 | | Matrix rotation and translation |
| 11679 | | -0.63798257 0.75422544 0.15531328 136.12375073 |
| 11680 | | -0.18489569 -0.34582884 0.91989999 137.20919739 |
| 11681 | | 0.74752379 0.55816340 0.36008580 127.92240453 |
| 11682 | | Axis -0.30978647 -0.50716133 -0.80425104 |
| 11683 | | Axis point 49.10494444 14.32106331 0.00000000 |
| 11684 | | Rotation angle (degrees) 144.27833383 |
| 11685 | | Shift along axis -214.63822165 |
| 11686 | | |
| 11687 | | |
| 11688 | | > ui mousemode right "rotate selected models" |
| 11689 | | |
| 11690 | | > view matrix models |
| 11691 | | > #4,-0.065253,-0.95269,-0.29684,53.167,-0.53736,0.28421,-0.79402,102.32,0.84082,0.1077,-0.53049,183.14 |
| 11692 | | |
| 11693 | | > fitmap #4 inMap #1 |
| 11694 | | |
| 11695 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11696 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11697 | | average map value = 0.0815, steps = 92 |
| 11698 | | shifted from previous position = 3.82 |
| 11699 | | rotated from previous position = 5.85 degrees |
| 11700 | | atoms outside contour = 1658, contour level = 0.062298 |
| 11701 | | |
| 11702 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11703 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11704 | | Matrix rotation and translation |
| 11705 | | -0.31758768 0.53932577 -0.77991395 126.87689518 |
| 11706 | | -0.75343036 0.35587475 0.55289768 128.97286966 |
| 11707 | | 0.57574365 0.76320434 0.29332298 127.08390693 |
| 11708 | | Axis 0.11156805 -0.71917873 -0.68580939 |
| 11709 | | Axis point 66.85734786 -0.00000000 73.44320584 |
| 11710 | | Rotation angle (degrees) 109.52359240 |
| 11711 | | Shift along axis -165.75447352 |
| 11712 | | |
| 11713 | | |
| 11714 | | > view matrix models |
| 11715 | | > #4,0.72635,0.68731,-0.0049786,52.826,0.66421,-0.70004,0.26223,119.79,0.17675,-0.19378,-0.96499,175.22 |
| 11716 | | |
| 11717 | | > view matrix models |
| 11718 | | > #4,0.18439,0.27266,0.94428,60.349,-0.48369,-0.81118,0.32868,114.2,0.8556,-0.51734,-0.017694,189.45 |
| 11719 | | |
| 11720 | | > fitmap #4 inMap #1 |
| 11721 | | |
| 11722 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11723 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11724 | | average map value = 0.08655, steps = 96 |
| 11725 | | shifted from previous position = 2.15 |
| 11726 | | rotated from previous position = 10.4 degrees |
| 11727 | | atoms outside contour = 1616, contour level = 0.062298 |
| 11728 | | |
| 11729 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11730 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11731 | | Matrix rotation and translation |
| 11732 | | -0.34435708 -0.91907736 -0.19161155 136.53282530 |
| 11733 | | -0.87153234 0.38882534 -0.29874107 119.85443168 |
| 11734 | | 0.34906958 0.06412206 -0.93490041 115.96605565 |
| 11735 | | Axis 0.55577929 -0.82813422 0.07282234 |
| 11736 | | Axis point 96.62461386 0.00000000 77.92747253 |
| 11737 | | Rotation angle (degrees) 160.94683597 |
| 11738 | | Shift along axis -14.92852115 |
| 11739 | | |
| 11740 | | |
| 11741 | | > view matrix models |
| 11742 | | > #4,0.5244,-0.8376,-0.15309,58.324,0.69285,0.31525,0.64852,118.15,-0.49494,-0.44615,0.74565,187.96 |
| 11743 | | |
| 11744 | | > fitmap #4 inMap #1 |
| 11745 | | |
| 11746 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11747 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11748 | | average map value = 0.08155, steps = 88 |
| 11749 | | shifted from previous position = 3.02 |
| 11750 | | rotated from previous position = 5.61 degrees |
| 11751 | | atoms outside contour = 1674, contour level = 0.062298 |
| 11752 | | |
| 11753 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11754 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11755 | | Matrix rotation and translation |
| 11756 | | 0.39462732 0.55714882 0.73065345 143.70402308 |
| 11757 | | 0.13862139 0.74998853 -0.64676217 118.30511361 |
| 11758 | | -0.90832449 0.35651422 0.21873322 116.71859061 |
| 11759 | | Axis 0.51012737 0.83335711 -0.21280507 |
| 11760 | | Axis point 142.35785551 -0.00000000 23.94375517 |
| 11761 | | Rotation angle (degrees) 79.53268821 |
| 11762 | | Shift along axis 147.05945511 |
| 11763 | | |
| 11764 | | |
| 11765 | | > view matrix models |
| 11766 | | > #4,0.59879,-0.78592,-0.15418,60.866,0.6917,0.41042,0.59423,118.16,-0.40374,-0.46246,0.78938,190.78 |
| 11767 | | |
| 11768 | | > fitmap #4 inMap #1 |
| 11769 | | |
| 11770 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11771 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11772 | | average map value = 0.08155, steps = 84 |
| 11773 | | shifted from previous position = 0.0671 |
| 11774 | | rotated from previous position = 3.31 degrees |
| 11775 | | atoms outside contour = 1681, contour level = 0.062298 |
| 11776 | | |
| 11777 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11778 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11779 | | Matrix rotation and translation |
| 11780 | | 0.39459432 0.55733020 0.73053292 143.69828168 |
| 11781 | | 0.13873468 0.74979493 -0.64696232 118.31324861 |
| 11782 | | -0.90832153 0.35663792 0.21854379 116.70774711 |
| 11783 | | Axis 0.51027211 0.83326177 -0.21283137 |
| 11784 | | Axis point 142.32423705 0.00000000 23.97207520 |
| 11785 | | Rotation angle (degrees) 79.54480772 |
| 11786 | | Shift along axis 147.07206226 |
| 11787 | | |
| 11788 | | |
| 11789 | | > ui mousemode right "move picked models" |
| 11790 | | |
| 11791 | | > view matrix models |
| 11792 | | > #1,-0.3559,-0.43273,-0.8283,261.02,0.91796,0.004275,-0.39665,34.882,0.17518,-0.90151,0.3957,225.6 |
| 11793 | | |
| 11794 | | > fitmap #4 inMap #1 |
| 11795 | | |
| 11796 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11797 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11798 | | average map value = 0.08155, steps = 68 |
| 11799 | | shifted from previous position = 2.98 |
| 11800 | | rotated from previous position = 0.00834 degrees |
| 11801 | | atoms outside contour = 1679, contour level = 0.062298 |
| 11802 | | |
| 11803 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11804 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11805 | | Matrix rotation and translation |
| 11806 | | 0.39459952 0.55740598 0.73047230 143.69583958 |
| 11807 | | 0.13879501 0.74970232 -0.64705670 118.31674323 |
| 11808 | | -0.90831005 0.35671418 0.21846701 116.70220688 |
| 11809 | | Axis 0.51035101 0.83321228 -0.21283595 |
| 11810 | | Axis point 142.30915935 0.00000000 23.98522829 |
| 11811 | | Rotation angle (degrees) 79.54959083 |
| 11812 | | Shift along axis 147.07985461 |
| 11813 | | |
| 11814 | | |
| 11815 | | > view matrix models |
| 11816 | | > #1,-0.3559,-0.43273,-0.8283,262.87,0.91796,0.004275,-0.39665,36.863,0.17518,-0.90151,0.3957,219.02 |
| 11817 | | |
| 11818 | | > view matrix models |
| 11819 | | > #1,-0.3559,-0.43273,-0.8283,267.88,0.91796,0.004275,-0.39665,20.132,0.17518,-0.90151,0.3957,224.1 |
| 11820 | | |
| 11821 | | > fitmap #4 inMap #1 |
| 11822 | | |
| 11823 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11824 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11825 | | average map value = 0.0735, steps = 96 |
| 11826 | | shifted from previous position = 3.34 |
| 11827 | | rotated from previous position = 11 degrees |
| 11828 | | atoms outside contour = 1803, contour level = 0.062298 |
| 11829 | | |
| 11830 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11831 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11832 | | Matrix rotation and translation |
| 11833 | | 0.28983482 0.69770675 0.65513438 160.01756592 |
| 11834 | | 0.07811356 0.66498765 -0.74275816 120.91123681 |
| 11835 | | -0.95388366 0.26645205 0.13823622 118.13863440 |
| 11836 | | Axis 0.50515223 0.80538131 -0.31013250 |
| 11837 | | Axis point 147.48649067 0.00000000 24.78690374 |
| 11838 | | Rotation angle (degrees) 87.33310195 |
| 11839 | | Shift along axis 141.57425096 |
| 11840 | | |
| 11841 | | |
| 11842 | | > view matrix models |
| 11843 | | > #1,-0.3559,-0.43273,-0.8283,269.55,0.91796,0.004275,-0.39665,23.547,0.17518,-0.90151,0.3957,221.23 |
| 11844 | | |
| 11845 | | > fitmap #4 inMap #1 |
| 11846 | | |
| 11847 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11848 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11849 | | average map value = 0.07426, steps = 108 |
| 11850 | | shifted from previous position = 4.43 |
| 11851 | | rotated from previous position = 13.8 degrees |
| 11852 | | atoms outside contour = 1805, contour level = 0.062298 |
| 11853 | | |
| 11854 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11855 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11856 | | Matrix rotation and translation |
| 11857 | | 0.44589824 0.56892088 0.69101649 154.98904290 |
| 11858 | | -0.08513659 0.79547047 -0.59998207 118.42303259 |
| 11859 | | -0.89102554 0.20870016 0.40313487 126.59448391 |
| 11860 | | Axis 0.42712662 0.83559677 -0.34545751 |
| 11861 | | Axis point 188.09165266 0.00000000 1.58453866 |
| 11862 | | Rotation angle (degrees) 71.20084154 |
| 11863 | | Shift along axis 121.42083301 |
| 11864 | | |
| 11865 | | |
| 11866 | | > view matrix models |
| 11867 | | > #1,-0.3559,-0.43273,-0.8283,264.61,0.91796,0.004275,-0.39665,29.199,0.17518,-0.90151,0.3957,221.73 |
| 11868 | | |
| 11869 | | > fitmap #4 inMap #1 |
| 11870 | | |
| 11871 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11872 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11873 | | average map value = 0.08284, steps = 140 |
| 11874 | | shifted from previous position = 7.73 |
| 11875 | | rotated from previous position = 10.4 degrees |
| 11876 | | atoms outside contour = 1611, contour level = 0.062298 |
| 11877 | | |
| 11878 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11879 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11880 | | Matrix rotation and translation |
| 11881 | | 0.30349172 0.66447755 0.68290728 141.37280493 |
| 11882 | | -0.06310548 0.72915521 -0.68143259 115.74635024 |
| 11883 | | -0.95074206 0.16371396 0.26322474 117.25436756 |
| 11884 | | Axis 0.42727460 0.82591222 -0.36783886 |
| 11885 | | Axis point 152.31310216 0.00000000 18.95027547 |
| 11886 | | Rotation angle (degrees) 81.49267624 |
| 11887 | | Shift along axis 112.87061995 |
| 11888 | | |
| 11889 | | |
| 11890 | | > view matrix models |
| 11891 | | > #1,-0.3559,-0.43273,-0.8283,258.37,0.91796,0.004275,-0.39665,22.484,0.17518,-0.90151,0.3957,229.41 |
| 11892 | | |
| 11893 | | > fitmap #4 inMap #1 |
| 11894 | | |
| 11895 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11896 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11897 | | average map value = 0.07691, steps = 100 |
| 11898 | | shifted from previous position = 6.36 |
| 11899 | | rotated from previous position = 9.07 degrees |
| 11900 | | atoms outside contour = 1739, contour level = 0.062298 |
| 11901 | | |
| 11902 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11903 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11904 | | Matrix rotation and translation |
| 11905 | | 0.22553359 0.69403154 0.68370667 141.82908981 |
| 11906 | | -0.19970002 0.71981984 -0.66481523 121.90972648 |
| 11907 | | -0.95354837 0.01340193 0.30094167 112.87428524 |
| 11908 | | Axis 0.34170955 0.82490641 -0.45029325 |
| 11909 | | Axis point 153.43012951 0.00000000 15.43634442 |
| 11910 | | Rotation angle (degrees) 82.92620814 |
| 11911 | | Shift along axis 98.20193975 |
| 11912 | | |
| 11913 | | |
| 11914 | | > view matrix models |
| 11915 | | > #1,-0.3559,-0.43273,-0.8283,263.09,0.91796,0.004275,-0.39665,33.639,0.17518,-0.90151,0.3957,220.51 |
| 11916 | | |
| 11917 | | > fitmap #4 inMap #1 |
| 11918 | | |
| 11919 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11920 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11921 | | average map value = 0.08121, steps = 68 |
| 11922 | | shifted from previous position = 2.01 |
| 11923 | | rotated from previous position = 5.15 degrees |
| 11924 | | atoms outside contour = 1630, contour level = 0.062298 |
| 11925 | | |
| 11926 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11927 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11928 | | Matrix rotation and translation |
| 11929 | | 0.14594023 0.72382992 0.67436762 135.55499460 |
| 11930 | | -0.18089158 0.68969819 -0.70113810 114.34722378 |
| 11931 | | -0.97261487 -0.01966317 0.23158945 124.07775314 |
| 11932 | | Axis 0.34093013 0.82395687 -0.45261653 |
| 11933 | | Axis point 145.92726169 -0.00000000 26.40486048 |
| 11934 | | Rotation angle (degrees) 88.07370075 |
| 11935 | | Shift along axis 84.27232056 |
| 11936 | | |
| 11937 | | |
| 11938 | | > ui mousemode right "translate selected models" |
| 11939 | | |
| 11940 | | > view matrix models |
| 11941 | | > #4,0.83196,-0.53977,-0.12843,68.869,0.51898,0.67519,0.52418,123.73,-0.19623,-0.50275,0.84187,187.48 |
| 11942 | | |
| 11943 | | > fitmap #4 inMap #1 |
| 11944 | | |
| 11945 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11946 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11947 | | average map value = 0.07801, steps = 88 |
| 11948 | | shifted from previous position = 2.54 |
| 11949 | | rotated from previous position = 8.89 degrees |
| 11950 | | atoms outside contour = 1714, contour level = 0.062298 |
| 11951 | | |
| 11952 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11953 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11954 | | Matrix rotation and translation |
| 11955 | | 0.13475671 0.64440981 0.75271283 147.07906235 |
| 11956 | | -0.26940608 0.75485315 -0.59801093 116.97921749 |
| 11957 | | -0.95355177 -0.12219943 0.27532945 113.24955880 |
| 11958 | | Axis 0.23871893 0.85604837 -0.45846969 |
| 11959 | | Axis point 153.31240190 0.00000000 7.26128081 |
| 11960 | | Rotation angle (degrees) 85.26946423 |
| 11961 | | Shift along axis 83.32893451 |
| 11962 | | |
| 11963 | | |
| 11964 | | > view matrix models |
| 11965 | | > #4,0.85845,-0.45477,-0.23717,65.631,0.50078,0.64324,0.57919,113.55,-0.11084,-0.61598,0.77993,190.66 |
| 11966 | | |
| 11967 | | > fitmap #4 inMap #1 |
| 11968 | | |
| 11969 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11970 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11971 | | average map value = 0.08498, steps = 60 |
| 11972 | | shifted from previous position = 1.76 |
| 11973 | | rotated from previous position = 5.33 degrees |
| 11974 | | atoms outside contour = 1608, contour level = 0.062298 |
| 11975 | | |
| 11976 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 11977 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 11978 | | Matrix rotation and translation |
| 11979 | | 0.09474062 0.67890893 0.72808438 138.05050452 |
| 11980 | | -0.20534419 0.72897310 -0.65301759 112.81597517 |
| 11981 | | -0.97409341 -0.08764061 0.20847337 120.85485709 |
| 11982 | | Axis 0.28272511 0.85119914 -0.44218383 |
| 11983 | | Axis point 143.97603146 0.00000000 21.09773284 |
| 11984 | | Rotation angle (degrees) 89.07786828 |
| 11985 | | Shift along axis 81.61914130 |
| 11986 | | |
| 11987 | | |
| 11988 | | > view matrix models |
| 11989 | | > #4,0.86198,-0.48448,-0.14922,61.593,0.47247,0.66109,0.58287,109.45,-0.18374,-0.57293,0.79875,184.58 |
| 11990 | | |
| 11991 | | > view matrix models |
| 11992 | | > #4,0.86198,-0.48448,-0.14922,57.71,0.47247,0.66109,0.58287,120.37,-0.18374,-0.57293,0.79875,185.1 |
| 11993 | | |
| 11994 | | > fitmap #4 inMap #1 |
| 11995 | | |
| 11996 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 11997 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 11998 | | average map value = 0.08079, steps = 112 |
| 11999 | | shifted from previous position = 2.12 |
| 12000 | | rotated from previous position = 10 degrees |
| 12001 | | atoms outside contour = 1666, contour level = 0.062298 |
| 12002 | | |
| 12003 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12004 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12005 | | Matrix rotation and translation |
| 12006 | | 0.22473953 0.74287352 0.63057994 144.26792063 |
| 12007 | | -0.20703171 0.66876240 -0.71406912 120.41388773 |
| 12008 | | -0.95217120 0.02992952 0.30409572 121.46802984 |
| 12009 | | Axis 0.37382831 0.79526648 -0.47728778 |
| 12010 | | Axis point 158.55031927 0.00000000 20.51511027 |
| 12011 | | Rotation angle (degrees) 84.32999398 |
| 12012 | | Shift along axis 91.71735466 |
| 12013 | | |
| 12014 | | |
| 12015 | | > view matrix models |
| 12016 | | > #4,0.79829,-0.57857,-0.16731,61.487,0.5831,0.67291,0.45517,118.92,-0.15077,-0.46092,0.87454,193.12 |
| 12017 | | |
| 12018 | | > fitmap #4 inMap #1 |
| 12019 | | |
| 12020 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12021 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12022 | | average map value = 0.08091, steps = 100 |
| 12023 | | shifted from previous position = 2.95 |
| 12024 | | rotated from previous position = 11.6 degrees |
| 12025 | | atoms outside contour = 1676, contour level = 0.062298 |
| 12026 | | |
| 12027 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12028 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12029 | | Matrix rotation and translation |
| 12030 | | 0.03685245 0.77378704 0.63237292 142.10222091 |
| 12031 | | -0.14770689 0.63006991 -0.76236118 114.55657387 |
| 12032 | | -0.98834435 -0.06531096 0.13751330 121.35930998 |
| 12033 | | Axis 0.35020334 0.81426071 -0.46296557 |
| 12034 | | Axis point 136.35989899 0.00000000 31.07436355 |
| 12035 | | Rotation angle (degrees) 95.61147211 |
| 12036 | | Shift along axis 86.85840708 |
| 12037 | | |
| 12038 | | |
| 12039 | | > ui mousemode right "rotate selected models" |
| 12040 | | |
| 12041 | | > fitmap #4 inMap #1 |
| 12042 | | |
| 12043 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12044 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12045 | | average map value = 0.08091, steps = 40 |
| 12046 | | shifted from previous position = 0.0118 |
| 12047 | | rotated from previous position = 0.0123 degrees |
| 12048 | | atoms outside contour = 1676, contour level = 0.062298 |
| 12049 | | |
| 12050 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12051 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12052 | | Matrix rotation and translation |
| 12053 | | 0.03680650 0.77392007 0.63221277 142.09177102 |
| 12054 | | -0.14768435 0.62990732 -0.76249990 114.56441279 |
| 12055 | | -0.98834943 -0.06530298 0.13748057 121.35742255 |
| 12056 | | Axis 0.35028122 0.81419250 -0.46302660 |
| 12057 | | Axis point 136.34378075 0.00000000 31.09450907 |
| 12058 | | Rotation angle (degrees) 95.61841756 |
| 12059 | | Shift along axis 86.85784928 |
| 12060 | | |
| 12061 | | |
| 12062 | | > ui mousemode right "translate selected models" |
| 12063 | | |
| 12064 | | > ui mousemode right "rotate selected models" |
| 12065 | | |
| 12066 | | > view matrix models |
| 12067 | | > #4,0.13677,-0.9675,-0.21269,58.223,-0.98289,-0.15927,0.092491,107.93,-0.12336,0.19641,-0.97273,170.96 |
| 12068 | | |
| 12069 | | > view matrix models |
| 12070 | | > #4,0.52847,-0.83839,0.13349,63.224,-0.80749,-0.54495,-0.22579,107.56,0.26205,0.011532,-0.96499,174.04 |
| 12071 | | |
| 12072 | | > fitmap #4 inMap #1 |
| 12073 | | |
| 12074 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12075 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12076 | | average map value = 0.08064, steps = 72 |
| 12077 | | shifted from previous position = 2.16 |
| 12078 | | rotated from previous position = 5.51 degrees |
| 12079 | | atoms outside contour = 1659, contour level = 0.062298 |
| 12080 | | |
| 12081 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12082 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12083 | | Matrix rotation and translation |
| 12084 | | -0.87072753 -0.28386042 -0.40156795 129.48707122 |
| 12085 | | -0.47971661 0.31063809 0.82059487 129.61857987 |
| 12086 | | -0.10819211 0.90715337 -0.40665370 116.77417614 |
| 12087 | | Axis 0.23831538 -0.80773094 -0.53923697 |
| 12088 | | Axis point 81.42768731 0.00000000 24.30795860 |
| 12089 | | Rotation angle (degrees) 169.53674348 |
| 12090 | | Shift along axis -136.80713048 |
| 12091 | | |
| 12092 | | |
| 12093 | | > view matrix models |
| 12094 | | > #4,0.5741,-0.61522,0.54029,67.214,-0.6799,-0.72587,-0.1041,108.58,0.45623,-0.30758,-0.83501,176.51 |
| 12095 | | |
| 12096 | | > ui mousemode right "translate selected models" |
| 12097 | | |
| 12098 | | > view matrix models |
| 12099 | | > #4,0.5741,-0.61522,0.54029,72.329,-0.6799,-0.72587,-0.1041,121.7,0.45623,-0.30758,-0.83501,171.57 |
| 12100 | | |
| 12101 | | > fitmap #4 inMap #1 |
| 12102 | | |
| 12103 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12104 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12105 | | average map value = 0.07777, steps = 76 |
| 12106 | | shifted from previous position = 3.65 |
| 12107 | | rotated from previous position = 6.16 degrees |
| 12108 | | atoms outside contour = 1709, contour level = 0.062298 |
| 12109 | | |
| 12110 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12111 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12112 | | Matrix rotation and translation |
| 12113 | | -0.74546733 -0.43021400 -0.50911134 137.31510672 |
| 12114 | | -0.66575082 0.51779255 0.53727713 126.66774611 |
| 12115 | | 0.03246991 0.73946385 -0.67241275 107.59582959 |
| 12116 | | Axis 0.32389603 -0.86759419 -0.37732172 |
| 12117 | | Axis point 86.06692892 0.00000000 42.08726823 |
| 12118 | | Rotation angle (degrees) 161.81316132 |
| 12119 | | Shift along axis -106.01862671 |
| 12120 | | |
| 12121 | | |
| 12122 | | > fitmap #4 inMap #1 |
| 12123 | | |
| 12124 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12125 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12126 | | average map value = 0.07777, steps = 76 |
| 12127 | | shifted from previous position = 3.65 |
| 12128 | | rotated from previous position = 6.16 degrees |
| 12129 | | atoms outside contour = 1709, contour level = 0.062298 |
| 12130 | | |
| 12131 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12132 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12133 | | Matrix rotation and translation |
| 12134 | | -0.74546733 -0.43021400 -0.50911134 137.31510672 |
| 12135 | | -0.66575082 0.51779255 0.53727713 126.66774611 |
| 12136 | | 0.03246991 0.73946385 -0.67241275 107.59582959 |
| 12137 | | Axis 0.32389603 -0.86759419 -0.37732172 |
| 12138 | | Axis point 86.06692892 0.00000000 42.08726823 |
| 12139 | | Rotation angle (degrees) 161.81316132 |
| 12140 | | Shift along axis -106.01862671 |
| 12141 | | |
| 12142 | | |
| 12143 | | > view matrix models |
| 12144 | | > #4,0.5265,-0.68345,0.50566,71.77,-0.70003,-0.68602,-0.19833,110.77,0.48244,-0.24955,-0.83963,174.26 |
| 12145 | | |
| 12146 | | > fitmap #4 inMap #1 |
| 12147 | | |
| 12148 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12149 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12150 | | average map value = 0.08133, steps = 164 |
| 12151 | | shifted from previous position = 2.61 |
| 12152 | | rotated from previous position = 3.52 degrees |
| 12153 | | atoms outside contour = 1603, contour level = 0.062298 |
| 12154 | | |
| 12155 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12156 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12157 | | Matrix rotation and translation |
| 12158 | | -0.73020400 -0.42467598 -0.53521249 132.16508847 |
| 12159 | | -0.68311420 0.46816803 0.56051197 125.88788290 |
| 12160 | | 0.01253341 0.77489934 -0.63196037 107.78533605 |
| 12161 | | Axis 0.33368833 -0.85255215 -0.40225232 |
| 12162 | | Axis point 84.43755863 0.00000000 40.42450847 |
| 12163 | | Rotation angle (degrees) 161.26213267 |
| 12164 | | Shift along axis -106.58093849 |
| 12165 | | |
| 12166 | | |
| 12167 | | > ui mousemode right "rotate selected models" |
| 12168 | | |
| 12169 | | > view matrix models |
| 12170 | | > #4,0.50338,0.73791,0.44955,65.886,-0.86167,0.38998,0.32473,112.46,0.064311,-0.55083,0.83214,187.68 |
| 12171 | | |
| 12172 | | > fitmap #4 inMap #1 |
| 12173 | | |
| 12174 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12175 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12176 | | average map value = 0.0788, steps = 64 |
| 12177 | | shifted from previous position = 1.81 |
| 12178 | | rotated from previous position = 7.81 degrees |
| 12179 | | atoms outside contour = 1635, contour level = 0.062298 |
| 12180 | | |
| 12181 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12182 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12183 | | Matrix rotation and translation |
| 12184 | | -0.97460960 0.02401521 0.22261938 134.83783267 |
| 12185 | | -0.22084100 0.06097629 -0.97340184 116.68301389 |
| 12186 | | -0.03695095 -0.99785027 -0.05412453 121.47737987 |
| 12187 | | Axis -0.06835439 0.72572231 -0.68458367 |
| 12188 | | Axis point 80.13122970 0.00000000 107.43136318 |
| 12189 | | Rotation angle (degrees) 169.69804100 |
| 12190 | | Shift along axis -7.69872161 |
| 12191 | | |
| 12192 | | |
| 12193 | | > view matrix models |
| 12194 | | > #4,0.43476,0.75494,0.49096,64.906,-0.89849,0.40047,0.17985,109.31,-0.060833,-0.51932,0.85241,186.48 |
| 12195 | | |
| 12196 | | > view matrix models |
| 12197 | | > #4,0.37962,0.81152,0.44421,63.908,-0.92492,0.3434,0.16309,109.23,-0.020186,-0.47277,0.88096,186.79 |
| 12198 | | |
| 12199 | | > fitmap #4 inMap #1 |
| 12200 | | |
| 12201 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12202 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12203 | | average map value = 0.08235, steps = 72 |
| 12204 | | shifted from previous position = 1.49 |
| 12205 | | rotated from previous position = 7.89 degrees |
| 12206 | | atoms outside contour = 1624, contour level = 0.062298 |
| 12207 | | |
| 12208 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12209 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12210 | | Matrix rotation and translation |
| 12211 | | -0.99619768 0.05518305 0.06741667 133.71552169 |
| 12212 | | -0.06212135 0.09261852 -0.99376191 116.43556565 |
| 12213 | | -0.06108285 -0.99417133 -0.08883831 121.95798033 |
| 12214 | | Axis -0.00235310 0.73854424 -0.67420091 |
| 12215 | | Axis point 70.71021832 0.00000000 110.17933525 |
| 12216 | | Rotation angle (degrees) 175.00923687 |
| 12217 | | Shift along axis 3.45398873 |
| 12218 | | |
| 12219 | | |
| 12220 | | > select subtract #4 |
| 12221 | | |
| 12222 | | 3 models selected |
| 12223 | | |
| 12224 | | > select add #1 |
| 12225 | | |
| 12226 | | 2 models selected |
| 12227 | | |
| 12228 | | > view matrix models |
| 12229 | | > #1,-0.36514,-0.41428,-0.83369,262.73,0.91669,-0.0038632,-0.39957,34.969,0.16231,-0.91014,0.38117,224.44 |
| 12230 | | |
| 12231 | | > view matrix models |
| 12232 | | > #1,-0.37604,-0.41692,-0.82751,263.66,0.9117,-0.0069311,-0.41081,37.037,0.16554,-0.90892,0.38271,223.77 |
| 12233 | | |
| 12234 | | > view matrix models |
| 12235 | | > #1,-0.41017,-0.48301,-0.77361,269.31,0.88569,-0.0086434,-0.4642,45.738,0.21752,-0.87557,0.43134,209.08 |
| 12236 | | |
| 12237 | | > view matrix models |
| 12238 | | > #1,-0.78689,-0.36475,-0.49775,272.48,0.59276,-0.22254,-0.77402,135,0.17155,-0.90412,0.39132,221.66 |
| 12239 | | |
| 12240 | | > view matrix models |
| 12241 | | > #1,-0.45016,-0.5106,-0.73256,272.8,0.85341,-0.0045788,-0.52122,54.921,0.26278,-0.8598,0.43781,201.4 |
| 12242 | | |
| 12243 | | > view matrix models |
| 12244 | | > #1,-0.3993,-0.4253,-0.81221,265.74,0.89325,0.019145,-0.44916,40.301,0.20658,-0.90485,0.37225,219.58 |
| 12245 | | |
| 12246 | | > fitmap #4 inMap #1 |
| 12247 | | |
| 12248 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12249 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12250 | | average map value = 0.08235, steps = 88 |
| 12251 | | shifted from previous position = 1.31 |
| 12252 | | rotated from previous position = 3.47 degrees |
| 12253 | | atoms outside contour = 1627, contour level = 0.062298 |
| 12254 | | |
| 12255 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12256 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12257 | | Matrix rotation and translation |
| 12258 | | -0.99616279 0.05526963 0.06785987 133.73421709 |
| 12259 | | -0.06254233 0.09283653 -0.99371516 116.43032565 |
| 12260 | | -0.06122214 -0.99414619 -0.08902360 121.94470303 |
| 12261 | | Axis -0.00246633 0.73861296 -0.67412522 |
| 12262 | | Axis point 70.74420521 0.00000000 110.14161393 |
| 12263 | | Rotation angle (degrees) 174.98702336 |
| 12264 | | Shift along axis 3.46111591 |
| 12265 | | |
| 12266 | | |
| 12267 | | > select add #4 |
| 12268 | | |
| 12269 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 5 models selected |
| 12270 | | |
| 12271 | | > volume #1 color #808080e0 |
| 12272 | | |
| 12273 | | > view matrix models |
| 12274 | | > #1,-0.18868,-0.51037,-0.839,252.98,0.93974,-0.34189,-0.0033579,28.353,-0.28513,-0.78907,0.54412,247.15,#4,0.27124,0.77628,0.56905,66.013,-0.91454,0.023538,0.40381,113.81,0.30007,-0.62995,0.71632,183.5 |
| 12275 | | |
| 12276 | | > view matrix models |
| 12277 | | > #1,-0.43261,-0.55465,-0.71078,273.28,0.88413,-0.41534,-0.21401,64.394,-0.17652,-0.72101,0.67007,214.14,#4,0.50915,0.63122,0.58508,64.175,-0.84166,0.22306,0.49178,108.18,0.17991,-0.74284,0.64485,188.3 |
| 12278 | | |
| 12279 | | > select subtract #1 |
| 12280 | | |
| 12281 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 12282 | | |
| 12283 | | > view matrix models |
| 12284 | | > #4,0.31803,0.31026,0.89588,67.331,-0.93805,0.24009,0.24985,105.27,-0.13758,-0.91984,0.36739,184.58 |
| 12285 | | |
| 12286 | | > fitmap #4 inMap #1 |
| 12287 | | |
| 12288 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12289 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12290 | | average map value = 0.0829, steps = 164 |
| 12291 | | shifted from previous position = 4.42 |
| 12292 | | rotated from previous position = 18.8 degrees |
| 12293 | | atoms outside contour = 1608, contour level = 0.062298 |
| 12294 | | |
| 12295 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12296 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12297 | | Matrix rotation and translation |
| 12298 | | -0.95906279 -0.08087165 -0.27140067 130.37567198 |
| 12299 | | 0.22440803 0.36754797 -0.90252397 116.51306602 |
| 12300 | | 0.17274137 -0.92648165 -0.33435334 125.14504246 |
| 12301 | | Axis -0.04440937 -0.82328775 0.56588434 |
| 12302 | | Axis point 50.14230433 0.00000000 113.38098063 |
| 12303 | | Rotation angle (degrees) 164.35139335 |
| 12304 | | Shift along axis -30.89606178 |
| 12305 | | |
| 12306 | | |
| 12307 | | > view matrix models |
| 12308 | | > #4,0.19435,0.45435,0.86936,63.739,-0.94695,-0.14435,0.28713,105.92,0.25595,-0.87905,0.40219,191.1 |
| 12309 | | |
| 12310 | | > fitmap #4 inMap #1 |
| 12311 | | |
| 12312 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12313 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12314 | | average map value = 0.0829, steps = 76 |
| 12315 | | shifted from previous position = 0.0363 |
| 12316 | | rotated from previous position = 8.74 degrees |
| 12317 | | atoms outside contour = 1606, contour level = 0.062298 |
| 12318 | | |
| 12319 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12320 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12321 | | Matrix rotation and translation |
| 12322 | | -0.95910040 -0.08101320 -0.27122551 130.38058110 |
| 12323 | | 0.22420504 0.36749484 -0.90259605 116.50834303 |
| 12324 | | 0.17279617 -0.92649036 -0.33430088 125.14629399 |
| 12325 | | Axis -0.04430312 -0.82327322 0.56591381 |
| 12326 | | Axis point 50.15620521 0.00000000 113.38090317 |
| 12327 | | Rotation angle (degrees) 164.35545961 |
| 12328 | | Shift along axis -30.87244960 |
| 12329 | | |
| 12330 | | |
| 12331 | | > ui mousemode right "translate selected models" |
| 12332 | | |
| 12333 | | > view matrix models |
| 12334 | | > #4,0.16774,0.48975,0.85558,62.225,-0.97807,-0.025985,0.20663,101.38,0.12343,-0.87148,0.47465,184.03 |
| 12335 | | |
| 12336 | | > fitmap #4 inMap #1 |
| 12337 | | |
| 12338 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12339 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12340 | | average map value = 0.08008, steps = 96 |
| 12341 | | shifted from previous position = 1.93 |
| 12342 | | rotated from previous position = 3.57 degrees |
| 12343 | | atoms outside contour = 1697, contour level = 0.062298 |
| 12344 | | |
| 12345 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12346 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12347 | | Matrix rotation and translation |
| 12348 | | -0.94243154 -0.06391496 -0.32823415 127.80322433 |
| 12349 | | 0.28137540 0.37882688 -0.88165644 125.28000496 |
| 12350 | | 0.18069495 -0.92325785 -0.33903430 122.89557136 |
| 12351 | | Axis -0.06748953 -0.82563011 0.56016076 |
| 12352 | | Axis point 44.71019851 0.00000000 115.89254444 |
| 12353 | | Rotation angle (degrees) 162.04882204 |
| 12354 | | Shift along axis -43.21904705 |
| 12355 | | |
| 12356 | | |
| 12357 | | > view matrix models |
| 12358 | | > #4,0.12321,0.47377,0.87199,62.059,-0.98877,-0.016266,0.14854,101.73,0.084559,-0.8805,0.46644,188.54 |
| 12359 | | |
| 12360 | | > fitmap #4 inMap #1 |
| 12361 | | |
| 12362 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12363 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12364 | | average map value = 0.08506, steps = 144 |
| 12365 | | shifted from previous position = 1.38 |
| 12366 | | rotated from previous position = 13.3 degrees |
| 12367 | | atoms outside contour = 1578, contour level = 0.062298 |
| 12368 | | |
| 12369 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12370 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12371 | | Matrix rotation and translation |
| 12372 | | -0.98238381 -0.03097233 -0.18428985 130.61369863 |
| 12373 | | 0.17411858 0.20639537 -0.96285184 118.23884943 |
| 12374 | | 0.06785834 -0.97797835 -0.19736662 125.12842253 |
| 12375 | | Axis -0.04648928 -0.77494307 0.63031895 |
| 12376 | | Axis point 54.52187805 0.00000000 117.50528190 |
| 12377 | | Rotation angle (degrees) 170.63703660 |
| 12378 | | Shift along axis -18.82969840 |
| 12379 | | |
| 12380 | | |
| 12381 | | > view matrix models |
| 12382 | | > #4,0.28018,0.59405,0.75406,60.843,-0.9554,0.096188,0.27922,98.903,0.093336,-0.79866,0.59451,191.35 |
| 12383 | | |
| 12384 | | > fitmap #4 inMap #1 |
| 12385 | | |
| 12386 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12387 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12388 | | average map value = 0.08431, steps = 72 |
| 12389 | | shifted from previous position = 4.45 |
| 12390 | | rotated from previous position = 5.14 degrees |
| 12391 | | atoms outside contour = 1573, contour level = 0.062298 |
| 12392 | | |
| 12393 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12394 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12395 | | Matrix rotation and translation |
| 12396 | | -0.99484567 -0.00397967 -0.10132253 126.93733622 |
| 12397 | | 0.09793300 0.22136975 -0.97026004 118.59767735 |
| 12398 | | 0.02629106 -0.97518182 -0.21983899 123.44137140 |
| 12399 | | Axis -0.03012326 -0.78104618 0.62374631 |
| 12400 | | Axis point 57.63048434 0.00000000 112.38642965 |
| 12401 | | Rotation angle (degrees) 175.31405587 |
| 12402 | | Shift along axis -19.45792940 |
| 12403 | | |
| 12404 | | |
| 12405 | | > view matrix models |
| 12406 | | > #4,0.35737,0.57208,0.73825,64.289,-0.92588,0.11324,0.36046,102.68,0.12261,-0.81234,0.57014,194.22 |
| 12407 | | |
| 12408 | | > fitmap #4 inMap #1 |
| 12409 | | |
| 12410 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12411 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12412 | | average map value = 0.08228, steps = 68 |
| 12413 | | shifted from previous position = 3.07 |
| 12414 | | rotated from previous position = 7.55 degrees |
| 12415 | | atoms outside contour = 1575, contour level = 0.062298 |
| 12416 | | |
| 12417 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12418 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12419 | | Matrix rotation and translation |
| 12420 | | -0.98954360 -0.00619774 -0.14410078 125.64781023 |
| 12421 | | 0.13337523 0.34099096 -0.93055693 114.46499058 |
| 12422 | | 0.05490442 -0.94004614 -0.33659880 123.36904794 |
| 12423 | | Axis -0.03900906 -0.81808787 0.57376871 |
| 12424 | | Axis point 54.89816677 0.00000000 106.47186804 |
| 12425 | | Rotation angle (degrees) 173.01391709 |
| 12426 | | Shift along axis -27.75852350 |
| 12427 | | |
| 12428 | | |
| 12429 | | > view matrix models |
| 12430 | | > #4,0.31508,0.48172,0.81772,65.606,-0.94203,0.054071,0.33113,107.12,0.1153,-0.87466,0.47083,194.38 |
| 12431 | | |
| 12432 | | > fitmap #4 inMap #1 |
| 12433 | | |
| 12434 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12435 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12436 | | average map value = 0.08511, steps = 116 |
| 12437 | | shifted from previous position = 4.84 |
| 12438 | | rotated from previous position = 13.2 degrees |
| 12439 | | atoms outside contour = 1543, contour level = 0.062298 |
| 12440 | | |
| 12441 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12442 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12443 | | Matrix rotation and translation |
| 12444 | | -0.95761940 0.10228266 -0.26926444 126.93407284 |
| 12445 | | 0.28480800 0.47581742 -0.83215514 117.18376322 |
| 12446 | | 0.04300567 -0.87357658 -0.48478291 123.40447059 |
| 12447 | | Axis -0.11377460 -0.85773004 0.50135270 |
| 12448 | | Axis point 47.66852040 0.00000000 102.41811434 |
| 12449 | | Rotation angle (degrees) 169.51180897 |
| 12450 | | Shift along axis -53.08474321 |
| 12451 | | |
| 12452 | | |
| 12453 | | > view matrix models |
| 12454 | | > #4,0.22574,0.31276,0.92262,61.297,-0.97416,0.079758,0.21131,112.67,-0.0074958,-0.94648,0.32268,190.54 |
| 12455 | | |
| 12456 | | > fitmap #4 inMap #1 |
| 12457 | | |
| 12458 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12459 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12460 | | average map value = 0.07539, steps = 108 |
| 12461 | | shifted from previous position = 3.04 |
| 12462 | | rotated from previous position = 8.89 degrees |
| 12463 | | atoms outside contour = 1784, contour level = 0.062298 |
| 12464 | | |
| 12465 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12466 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12467 | | Matrix rotation and translation |
| 12468 | | -0.94837474 0.23247311 -0.21573502 137.90055107 |
| 12469 | | 0.29754635 0.41673340 -0.85895252 117.04515382 |
| 12470 | | -0.10977937 -0.87880005 -0.46439096 125.33711177 |
| 12471 | | Axis -0.15762408 -0.84147319 0.51679543 |
| 12472 | | Axis point 55.10456389 0.00000000 101.02883068 |
| 12473 | | Rotation angle (degrees) 176.39036092 |
| 12474 | | Shift along axis -55.45316025 |
| 12475 | | |
| 12476 | | |
| 12477 | | > view matrix models |
| 12478 | | > #4,0.32327,0.29292,0.89983,63.422,-0.93858,0.22052,0.26541,101.13,-0.12069,-0.93036,0.34622,187.88 |
| 12479 | | |
| 12480 | | > fitmap #4 inMap #1 |
| 12481 | | |
| 12482 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12483 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12484 | | average map value = 0.08438, steps = 80 |
| 12485 | | shifted from previous position = 3.34 |
| 12486 | | rotated from previous position = 1.12 degrees |
| 12487 | | atoms outside contour = 1617, contour level = 0.062298 |
| 12488 | | |
| 12489 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12490 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12491 | | Matrix rotation and translation |
| 12492 | | -0.95195521 0.21368421 -0.21936347 129.61218273 |
| 12493 | | 0.29204519 0.41792701 -0.86025962 117.15327786 |
| 12494 | | -0.09214597 -0.88299268 -0.46025324 123.87468388 |
| 12495 | | Axis -0.15041643 -0.84175224 0.51848632 |
| 12496 | | Axis point 50.92671950 0.00000000 100.74919161 |
| 12497 | | Rotation angle (degrees) 175.66619455 |
| 12498 | | Shift along axis -53.88250645 |
| 12499 | | |
| 12500 | | |
| 12501 | | > view matrix models |
| 12502 | | > #4,0.31534,0.30337,0.89918,64.12,-0.94323,0.20431,0.26185,104.06,-0.10427,-0.93071,0.35058,191.07 |
| 12503 | | |
| 12504 | | > fitmap #4 inMap #1 |
| 12505 | | |
| 12506 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12507 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12508 | | average map value = 0.08439, steps = 56 |
| 12509 | | shifted from previous position = 1.28 |
| 12510 | | rotated from previous position = 0.0282 degrees |
| 12511 | | atoms outside contour = 1615, contour level = 0.062298 |
| 12512 | | |
| 12513 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12514 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12515 | | Matrix rotation and translation |
| 12516 | | -0.95210331 0.21341128 -0.21898609 129.60761970 |
| 12517 | | 0.29158154 0.41798382 -0.86038929 117.13790064 |
| 12518 | | -0.09208414 -0.88303179 -0.46019057 123.89128808 |
| 12519 | | Axis -0.15019304 -0.84177038 0.51852163 |
| 12520 | | Axis point 50.95042094 0.00000000 100.74787434 |
| 12521 | | Rotation angle (degrees) 175.67705775 |
| 12522 | | Shift along axis -53.82906400 |
| 12523 | | |
| 12524 | | |
| 12525 | | > view matrix models |
| 12526 | | > #4,0.31561,0.30348,0.89905,62.481,-0.94318,0.20405,0.26223,107.91,-0.10387,-0.93073,0.35064,185.7 |
| 12527 | | |
| 12528 | | > ui mousemode right "rotate selected models" |
| 12529 | | |
| 12530 | | > view matrix models |
| 12531 | | > #4,0.4896,0.68592,0.53834,58.499,-0.86318,0.29392,0.41053,109.4,0.12336,-0.66568,0.73597,189.55 |
| 12532 | | |
| 12533 | | > fitmap #4 inMap #1 |
| 12534 | | |
| 12535 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12536 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12537 | | average map value = 0.08434, steps = 116 |
| 12538 | | shifted from previous position = 5.15 |
| 12539 | | rotated from previous position = 10 degrees |
| 12540 | | atoms outside contour = 1610, contour level = 0.062298 |
| 12541 | | |
| 12542 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12543 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12544 | | Matrix rotation and translation |
| 12545 | | -0.99445999 0.04242166 -0.09617549 132.02294699 |
| 12546 | | 0.10037064 0.11142173 -0.98869152 119.48193165 |
| 12547 | | -0.03122590 -0.99286736 -0.11506235 122.67816542 |
| 12548 | | Axis -0.04791916 -0.74531859 0.66498418 |
| 12549 | | Axis point 60.24252869 0.00000000 116.56162851 |
| 12550 | | Rotation angle (degrees) 177.50273495 |
| 12551 | | Shift along axis -13.79949464 |
| 12552 | | |
| 12553 | | |
| 12554 | | > view matrix models |
| 12555 | | > #4,0.41281,0.62317,0.66427,62.734,-0.90681,0.2129,0.36381,105.37,0.085293,-0.75255,0.65298,186.91 |
| 12556 | | |
| 12557 | | > view matrix models |
| 12558 | | > #4,-0.54574,0.82308,0.15719,51.55,-0.82569,-0.49622,-0.26834,102.84,-0.14286,-0.27623,0.95041,186.4 |
| 12559 | | |
| 12560 | | > fitmap #4 inMap #1 |
| 12561 | | |
| 12562 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12563 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12564 | | average map value = 0.07748, steps = 92 |
| 12565 | | shifted from previous position = 2.84 |
| 12566 | | rotated from previous position = 6.36 degrees |
| 12567 | | atoms outside contour = 1731, contour level = 0.062298 |
| 12568 | | |
| 12569 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12570 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12571 | | Matrix rotation and translation |
| 12572 | | -0.53674201 -0.67559051 -0.50545570 135.04153839 |
| 12573 | | 0.74857045 -0.10489249 -0.65470592 127.84688157 |
| 12574 | | 0.38929460 -0.72977738 0.56202730 127.81305102 |
| 12575 | | Axis -0.04459032 -0.53145633 0.84591127 |
| 12576 | | Axis point 23.71265992 148.20241159 0.00000000 |
| 12577 | | Rotation angle (degrees) 122.67027036 |
| 12578 | | Shift along axis 34.15191924 |
| 12579 | | |
| 12580 | | |
| 12581 | | > view matrix models |
| 12582 | | > #4,0.681,-0.40497,0.61011,69.083,-0.60066,0.16766,0.78173,112.68,-0.41887,-0.89883,-0.12908,174.88 |
| 12583 | | |
| 12584 | | > fitmap #4 inMap #1 |
| 12585 | | |
| 12586 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12587 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12588 | | average map value = 0.08011, steps = 72 |
| 12589 | | shifted from previous position = 2.26 |
| 12590 | | rotated from previous position = 11.1 degrees |
| 12591 | | atoms outside contour = 1623, contour level = 0.062298 |
| 12592 | | |
| 12593 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12594 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12595 | | Matrix rotation and translation |
| 12596 | | -0.85993703 0.38585279 0.33410466 134.35365908 |
| 12597 | | 0.12141426 0.79044830 -0.60037493 120.40002277 |
| 12598 | | -0.49574880 -0.47571957 -0.72658380 110.14159714 |
| 12599 | | Axis 0.14167912 0.94318372 -0.30055200 |
| 12600 | | Axis point 75.34109176 0.00000000 59.47791919 |
| 12601 | | Rotation angle (degrees) 153.90113192 |
| 12602 | | Shift along axis 99.49117276 |
| 12603 | | |
| 12604 | | |
| 12605 | | > view matrix models |
| 12606 | | > #4,0.95077,0.034254,0.308,66.806,-0.30358,-0.096663,0.94789,115.15,0.062241,-0.99473,-0.081506,179.8 |
| 12607 | | |
| 12608 | | > fitmap #4 inMap #1 |
| 12609 | | |
| 12610 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12611 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12612 | | average map value = 0.07776, steps = 92 |
| 12613 | | shifted from previous position = 2.54 |
| 12614 | | rotated from previous position = 7.95 degrees |
| 12615 | | atoms outside contour = 1729, contour level = 0.062298 |
| 12616 | | |
| 12617 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12618 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12619 | | Matrix rotation and translation |
| 12620 | | -0.59438056 0.09934098 0.79802451 141.01632771 |
| 12621 | | -0.52329705 0.70572531 -0.47761069 115.75035735 |
| 12622 | | -0.61063241 -0.70148638 -0.36748457 114.58512199 |
| 12623 | | Axis -0.14384997 0.90512395 -0.40007228 |
| 12624 | | Axis point 114.04198914 -0.00000000 44.17346955 |
| 12625 | | Rotation angle (degrees) 128.90786682 |
| 12626 | | Shift along axis 38.64089491 |
| 12627 | | |
| 12628 | | |
| 12629 | | > view matrix models |
| 12630 | | > #4,0.22958,0.9375,0.2615,59.38,-0.64631,-0.054038,0.76116,111.66,0.72772,-0.34375,0.59351,189.66 |
| 12631 | | |
| 12632 | | > fitmap #4 inMap #1 |
| 12633 | | |
| 12634 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12635 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12636 | | average map value = 0.0834, steps = 72 |
| 12637 | | shifted from previous position = 3.94 |
| 12638 | | rotated from previous position = 7 degrees |
| 12639 | | atoms outside contour = 1595, contour level = 0.062298 |
| 12640 | | |
| 12641 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12642 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12643 | | Matrix rotation and translation |
| 12644 | | -0.85229551 -0.34753098 0.39091504 134.02232447 |
| 12645 | | -0.29652263 -0.29464225 -0.90843836 118.65574829 |
| 12646 | | 0.43089057 -0.89017310 0.14807147 127.47678625 |
| 12647 | | Axis 0.27127416 -0.59371319 0.75757176 |
| 12648 | | Axis point 42.45662114 110.58101990 0.00000000 |
| 12649 | | Rotation angle (degrees) 178.07073352 |
| 12650 | | Shift along axis 62.48212428 |
| 12651 | | |
| 12652 | | |
| 12653 | | > view matrix models |
| 12654 | | > #4,-0.27828,0.94683,-0.1615,52.261,-0.7184,-0.093566,0.68931,106.74,0.63755,0.30784,0.70623,187.83 |
| 12655 | | |
| 12656 | | > fitmap #4 inMap #1 |
| 12657 | | |
| 12658 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12659 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12660 | | average map value = 0.0808, steps = 132 |
| 12661 | | shifted from previous position = 2.83 |
| 12662 | | rotated from previous position = 15.7 degrees |
| 12663 | | atoms outside contour = 1649, contour level = 0.062298 |
| 12664 | | |
| 12665 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12666 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12667 | | Matrix rotation and translation |
| 12668 | | -0.58603351 -0.52747426 0.61508993 136.23142744 |
| 12669 | | 0.17138154 -0.82261614 -0.54215408 125.69421661 |
| 12670 | | 0.79195523 -0.21230540 0.57247998 131.77882465 |
| 12671 | | Axis 0.41607220 -0.22309846 0.88153899 |
| 12672 | | Axis point 18.49719886 88.42825158 0.00000000 |
| 12673 | | Rotation angle (degrees) 156.64768492 |
| 12674 | | Shift along axis 144.80809579 |
| 12675 | | |
| 12676 | | |
| 12677 | | > view matrix models |
| 12678 | | > #4,0.36891,0.91471,0.16497,60.195,-0.63026,0.11573,0.76771,105.51,0.68314,-0.38719,0.6192,192.22 |
| 12679 | | |
| 12680 | | > fitmap #4 inMap #1 |
| 12681 | | |
| 12682 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12683 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12684 | | average map value = 0.08189, steps = 104 |
| 12685 | | shifted from previous position = 2.38 |
| 12686 | | rotated from previous position = 4.41 degrees |
| 12687 | | atoms outside contour = 1631, contour level = 0.062298 |
| 12688 | | |
| 12689 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12690 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12691 | | Matrix rotation and translation |
| 12692 | | -0.80983038 -0.28995947 0.50999829 131.90071510 |
| 12693 | | -0.42759895 -0.30345043 -0.85151451 116.94656647 |
| 12694 | | 0.40166390 -0.90765706 0.12175701 130.35673829 |
| 12695 | | Axis -0.30522644 0.58897438 -0.74829540 |
| 12696 | | Axis point 44.21532240 106.36079633 0.00000000 |
| 12697 | | Rotation angle (degrees) 174.72312611 |
| 12698 | | Shift along axis -68.92640231 |
| 12699 | | |
| 12700 | | |
| 12701 | | > view matrix models |
| 12702 | | > #4,-0.68546,0.62892,0.36688,56.155,-0.62167,-0.76784,0.15477,102.15,0.37904,-0.12199,0.9173,193.94 |
| 12703 | | |
| 12704 | | > view matrix models |
| 12705 | | > #4,-0.45986,0.6123,0.64313,60.139,-0.8598,-0.12597,-0.49485,91.966,-0.22198,-0.78053,0.58438,190.06 |
| 12706 | | |
| 12707 | | > view matrix models |
| 12708 | | > #4,0.28236,0.93277,0.22407,59.17,-0.95791,0.28677,0.013316,94.463,-0.051834,-0.21839,0.97448,192.38 |
| 12709 | | |
| 12710 | | > fitmap #4 inMap #1 |
| 12711 | | |
| 12712 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12713 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12714 | | average map value = 0.08352, steps = 92 |
| 12715 | | shifted from previous position = 1.28 |
| 12716 | | rotated from previous position = 8.51 degrees |
| 12717 | | atoms outside contour = 1632, contour level = 0.062298 |
| 12718 | | |
| 12719 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12720 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12721 | | Matrix rotation and translation |
| 12722 | | -0.96436279 -0.16182732 -0.20932350 123.53609605 |
| 12723 | | 0.25553125 -0.36448105 -0.89546487 119.87538683 |
| 12724 | | 0.06861623 -0.91704170 0.39284390 130.08830865 |
| 12725 | | Axis -0.04299024 -0.55377443 0.83155620 |
| 12726 | | Axis point 54.39059943 112.84591504 0.00000000 |
| 12727 | | Rotation angle (degrees) 165.46624617 |
| 12728 | | Shift along axis 36.48096987 |
| 12729 | | |
| 12730 | | |
| 12731 | | > view matrix models |
| 12732 | | > #4,0.66514,0.72902,0.1616,62.871,-0.73744,0.60732,0.29554,97.496,0.11731,-0.31575,0.94156,193.5 |
| 12733 | | |
| 12734 | | > fitmap #4 inMap #1 |
| 12735 | | |
| 12736 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12737 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12738 | | average map value = 0.07856, steps = 108 |
| 12739 | | shifted from previous position = 1.95 |
| 12740 | | rotated from previous position = 7.17 degrees |
| 12741 | | atoms outside contour = 1689, contour level = 0.062298 |
| 12742 | | |
| 12743 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12744 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12745 | | Matrix rotation and translation |
| 12746 | | -0.96668212 0.24112783 -0.08592461 124.13210057 |
| 12747 | | -0.04675939 -0.49635850 -0.86685742 119.74165182 |
| 12748 | | -0.25167286 -0.83395779 0.49109588 130.14413611 |
| 12749 | | Axis 0.09855583 0.49652401 -0.86240980 |
| 12750 | | Axis point 76.31803547 91.09223111 0.00000000 |
| 12751 | | Rotation angle (degrees) 170.39187302 |
| 12752 | | Shift along axis -40.54903082 |
| 12753 | | |
| 12754 | | |
| 12755 | | > view matrix models |
| 12756 | | > #4,0.50355,0.47986,0.71845,66.332,-0.8243,0.51592,0.23314,97.16,-0.25879,-0.70962,0.65534,190.38 |
| 12757 | | |
| 12758 | | > fitmap #4 inMap #1 |
| 12759 | | |
| 12760 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12761 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12762 | | average map value = 0.0813, steps = 152 |
| 12763 | | shifted from previous position = 2.03 |
| 12764 | | rotated from previous position = 6.31 degrees |
| 12765 | | atoms outside contour = 1631, contour level = 0.062298 |
| 12766 | | |
| 12767 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12768 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12769 | | Matrix rotation and translation |
| 12770 | | -0.92486067 0.29814583 -0.23609699 123.59868261 |
| 12771 | | 0.23426567 -0.04241343 -0.97124698 117.01104780 |
| 12772 | | -0.29958692 -0.95357756 -0.03061882 126.60803427 |
| 12773 | | Axis 0.19251601 0.69175038 -0.69600216 |
| 12774 | | Axis point 81.04960453 119.43714961 0.00000000 |
| 12775 | | Rotation angle (degrees) 177.36972814 |
| 12776 | | Shift along axis 16.61769661 |
| 12777 | | |
| 12778 | | |
| 12779 | | > ui mousemode right "translate selected models" |
| 12780 | | |
| 12781 | | > view matrix models |
| 12782 | | > #4,0.48311,0.57233,0.6626,65.018,-0.85089,0.48529,0.20121,105.44,-0.2064,-0.66101,0.72144,191.08 |
| 12783 | | |
| 12784 | | > fitmap #4 inMap #1 |
| 12785 | | |
| 12786 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12787 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12788 | | average map value = 0.08215, steps = 84 |
| 12789 | | shifted from previous position = 1.21 |
| 12790 | | rotated from previous position = 12 degrees |
| 12791 | | atoms outside contour = 1633, contour level = 0.062298 |
| 12792 | | |
| 12793 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12794 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12795 | | Matrix rotation and translation |
| 12796 | | -0.88949288 0.33815035 -0.30733816 129.84135420 |
| 12797 | | 0.36211470 0.11140504 -0.92545224 116.46476491 |
| 12798 | | -0.27870298 -0.93447485 -0.22154320 120.90015461 |
| 12799 | | Axis -0.23487532 -0.74542708 0.62383656 |
| 12800 | | Axis point 45.62510880 0.00000000 109.95695897 |
| 12801 | | Rotation angle (degrees) 178.89943899 |
| 12802 | | Shift along axis -41.89058305 |
| 12803 | | |
| 12804 | | |
| 12805 | | > view matrix models |
| 12806 | | > #4,0.38205,0.45613,0.80373,66.55,-0.87719,0.45269,0.16006,103.28,-0.29083,-0.76617,0.57306,188.73 |
| 12807 | | |
| 12808 | | > ui mousemode right "rotate selected models" |
| 12809 | | |
| 12810 | | > view matrix models |
| 12811 | | > #4,-0.80419,-0.24033,0.54361,60.106,-0.53769,0.68394,-0.49307,98.136,-0.2533,-0.68882,-0.67924,176.82 |
| 12812 | | |
| 12813 | | > view matrix models |
| 12814 | | > #4,-0.81341,-0.34806,-0.46608,50.988,-0.092522,0.86845,-0.48707,100.01,0.57429,-0.35307,-0.7386,179.68 |
| 12815 | | |
| 12816 | | > fitmap #4 inMap #1 |
| 12817 | | |
| 12818 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12819 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12820 | | average map value = 0.08023, steps = 96 |
| 12821 | | shifted from previous position = 5.23 |
| 12822 | | rotated from previous position = 7.68 degrees |
| 12823 | | atoms outside contour = 1643, contour level = 0.062298 |
| 12824 | | |
| 12825 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12826 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12827 | | Matrix rotation and translation |
| 12828 | | 0.25776322 0.95488454 -0.14749111 130.71044621 |
| 12829 | | 0.16507446 0.10688294 0.98047256 133.06000572 |
| 12830 | | 0.95200238 -0.27707678 -0.13007656 130.81578867 |
| 12831 | | Axis -0.68059050 -0.59505007 -0.42744823 |
| 12832 | | Axis point 0.00000000 26.59082027 24.49067295 |
| 12833 | | Rotation angle (degrees) 112.50197010 |
| 12834 | | Shift along axis -224.05463042 |
| 12835 | | |
| 12836 | | |
| 12837 | | > view matrix models |
| 12838 | | > #4,0.75998,-0.075068,0.64559,68.387,0.57412,0.54314,-0.61269,100.64,-0.30466,0.83628,0.45588,184.51 |
| 12839 | | |
| 12840 | | > fitmap #4 inMap #1 |
| 12841 | | |
| 12842 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12843 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12844 | | average map value = 0.07751, steps = 80 |
| 12845 | | shifted from previous position = 1.43 |
| 12846 | | rotated from previous position = 7.5 degrees |
| 12847 | | atoms outside contour = 1734, contour level = 0.062298 |
| 12848 | | |
| 12849 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12850 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12851 | | Matrix rotation and translation |
| 12852 | | 0.30700887 0.25973700 -0.91557754 126.02496400 |
| 12853 | | -0.46938340 -0.79556648 -0.38308380 119.47204522 |
| 12854 | | -0.82790384 0.54736703 -0.12232973 116.09025582 |
| 12855 | | Axis 0.78496226 -0.07396473 -0.61511257 |
| 12856 | | Axis point 0.00000000 38.99659920 132.69338630 |
| 12857 | | Rotation angle (degrees) 143.65312448 |
| 12858 | | Shift along axis 18.67954660 |
| 12859 | | |
| 12860 | | |
| 12861 | | > view matrix models |
| 12862 | | > #4,-0.62357,-0.044886,-0.78048,48.225,0.63278,-0.61524,-0.47018,107.15,-0.45908,-0.78706,0.41205,189.99 |
| 12863 | | |
| 12864 | | > fitmap #4 inMap #1 |
| 12865 | | |
| 12866 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12867 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12868 | | average map value = 0.08237, steps = 180 |
| 12869 | | shifted from previous position = 3.77 |
| 12870 | | rotated from previous position = 10.2 degrees |
| 12871 | | atoms outside contour = 1627, contour level = 0.062298 |
| 12872 | | |
| 12873 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12874 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12875 | | Matrix rotation and translation |
| 12876 | | 0.96595649 -0.22462540 -0.12834128 138.69163720 |
| 12877 | | 0.25416721 0.91650579 0.30889507 125.16114197 |
| 12878 | | 0.04823985 -0.33099934 0.94239712 137.92551877 |
| 12879 | | Axis -0.78182073 -0.21574620 0.58498712 |
| 12880 | | Axis point 0.00000000 551.37919953 -217.91213246 |
| 12881 | | Rotation angle (degrees) 24.15669155 |
| 12882 | | Shift along axis -54.75038628 |
| 12883 | | |
| 12884 | | |
| 12885 | | > ui mousemode right "translate selected models" |
| 12886 | | |
| 12887 | | > view matrix models |
| 12888 | | > #4,-0.59314,-0.1759,-0.78565,46.875,0.73814,-0.50843,-0.44345,110.21,-0.32144,-0.84295,0.43141,183.99 |
| 12889 | | |
| 12890 | | > fitmap #4 inMap #1 |
| 12891 | | |
| 12892 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12893 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12894 | | average map value = 0.08022, steps = 108 |
| 12895 | | shifted from previous position = 1.59 |
| 12896 | | rotated from previous position = 7.49 degrees |
| 12897 | | atoms outside contour = 1642, contour level = 0.062298 |
| 12898 | | |
| 12899 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12900 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12901 | | Matrix rotation and translation |
| 12902 | | 0.98863989 -0.12035032 -0.09003863 142.65492872 |
| 12903 | | 0.13994153 0.95561648 0.25925569 127.81569004 |
| 12904 | | 0.05484089 -0.26891066 0.96160258 130.68789970 |
| 12905 | | Axis -0.87100963 -0.23892369 0.42925247 |
| 12906 | | Axis point 0.00000000 684.21516058 -284.92142166 |
| 12907 | | Rotation angle (degrees) 17.64942477 |
| 12908 | | Shift along axis -98.69390975 |
| 12909 | | |
| 12910 | | |
| 12911 | | > view matrix models |
| 12912 | | > #4,-0.54429,-0.28683,-0.78833,42.767,0.80423,-0.44576,-0.39308,113.02,-0.23866,-0.84795,0.47331,182.39 |
| 12913 | | |
| 12914 | | > fitmap #4 inMap #1 |
| 12915 | | |
| 12916 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12917 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12918 | | average map value = 0.08073, steps = 112 |
| 12919 | | shifted from previous position = 2.64 |
| 12920 | | rotated from previous position = 5.06 degrees |
| 12921 | | atoms outside contour = 1708, contour level = 0.062298 |
| 12922 | | |
| 12923 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12924 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12925 | | Matrix rotation and translation |
| 12926 | | 0.97212066 -0.17207174 -0.15928820 145.57880337 |
| 12927 | | 0.20764324 0.94731370 0.24388731 131.14242762 |
| 12928 | | 0.10892978 -0.27016301 0.95663276 134.01937070 |
| 12929 | | Axis -0.74168032 -0.38698934 0.54785906 |
| 12930 | | Axis point 0.00000000 709.04800572 -249.19359155 |
| 12931 | | Rotation angle (degrees) 20.27610025 |
| 12932 | | Shift along axis -85.29992835 |
| 12933 | | |
| 12934 | | |
| 12935 | | > view matrix models |
| 12936 | | > #4,-0.61314,-0.25896,-0.74632,49.663,0.74993,-0.48778,-0.44686,103.97,-0.24832,-0.83367,0.49328,188.6 |
| 12937 | | |
| 12938 | | > fitmap #4 inMap #1 |
| 12939 | | |
| 12940 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12941 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12942 | | average map value = 0.08194, steps = 132 |
| 12943 | | shifted from previous position = 3.46 |
| 12944 | | rotated from previous position = 14.1 degrees |
| 12945 | | atoms outside contour = 1639, contour level = 0.062298 |
| 12946 | | |
| 12947 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12948 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12949 | | Matrix rotation and translation |
| 12950 | | 0.92493881 -0.24879052 -0.28738729 132.95339069 |
| 12951 | | 0.35016427 0.85184667 0.38954104 128.89512690 |
| 12952 | | 0.14789579 -0.46093439 0.87502361 136.31022847 |
| 12953 | | Axis -0.75422172 -0.38601932 0.53116727 |
| 12954 | | Axis point 0.00000000 411.59741693 -97.42074585 |
| 12955 | | Rotation angle (degrees) 34.31969353 |
| 12956 | | Shift along axis -77.62881288 |
| 12957 | | |
| 12958 | | |
| 12959 | | > view matrix models |
| 12960 | | > #4,-0.69948,-0.037225,-0.71368,51.297,0.64068,-0.47513,-0.60314,105.63,-0.31664,-0.87913,0.35619,187.16 |
| 12961 | | |
| 12962 | | > fitmap #4 inMap #1 |
| 12963 | | |
| 12964 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 12965 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 12966 | | average map value = 0.0815, steps = 128 |
| 12967 | | shifted from previous position = 3.98 |
| 12968 | | rotated from previous position = 14.3 degrees |
| 12969 | | atoms outside contour = 1667, contour level = 0.062298 |
| 12970 | | |
| 12971 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 12972 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 12973 | | Matrix rotation and translation |
| 12974 | | 0.85958807 -0.28577006 -0.42360809 136.34269890 |
| 12975 | | 0.48629898 0.71206548 0.50643464 131.06028683 |
| 12976 | | 0.15691284 -0.64132537 0.75105268 132.76292172 |
| 12977 | | Axis -0.76509714 -0.38697541 0.51466144 |
| 12978 | | Axis point 0.00000000 287.81230688 -28.90136780 |
| 12979 | | Rotation angle (degrees) 48.59684905 |
| 12980 | | Shift along axis -86.70456164 |
| 12981 | | |
| 12982 | | |
| 12983 | | > view matrix models |
| 12984 | | > #4,-0.75312,0.18452,-0.63147,48.16,0.52443,-0.41116,-0.7456,101.54,-0.39722,-0.89269,0.21289,180.38 |
| 12985 | | |
| 12986 | | > ui mousemode right "rotate selected models" |
| 12987 | | |
| 12988 | | > view matrix models |
| 12989 | | > #4,0.08827,-0.10591,-0.99045,50.88,0.99594,-0.0080379,0.089619,110.47,-0.017453,-0.99434,0.10477,182 |
| 12990 | | |
| 12991 | | > view matrix models |
| 12992 | | > #4,0.52749,-0.77507,-0.34789,62.279,0.65712,0.11267,0.74532,114.17,-0.53847,-0.62175,0.56875,181.78 |
| 12993 | | |
| 12994 | | > view matrix models |
| 12995 | | > #4,0.91813,0.38107,-0.10875,61.982,0.15768,-0.099547,0.98246,114.39,0.36356,-0.91917,-0.15149,181.48 |
| 12996 | | |
| 12997 | | > fitmap #4 inMap #1 |
| 12998 | | |
| 12999 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 13000 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 13001 | | average map value = 0.08035, steps = 100 |
| 13002 | | shifted from previous position = 0.959 |
| 13003 | | rotated from previous position = 5.39 degrees |
| 13004 | | atoms outside contour = 1679, contour level = 0.062298 |
| 13005 | | |
| 13006 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 13007 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13008 | | Matrix rotation and translation |
| 13009 | | -0.40034361 -0.10585739 0.91023030 140.40065664 |
| 13010 | | -0.82852606 0.46618168 -0.31019220 119.24037733 |
| 13011 | | -0.39149656 -0.87833299 -0.27433846 118.50219794 |
| 13012 | | Axis -0.35651645 0.81685217 -0.45348490 |
| 13013 | | Axis point 131.36728584 0.00000000 50.35830714 |
| 13014 | | Rotation angle (degrees) 127.17490587 |
| 13015 | | Shift along axis -6.39234005 |
| 13016 | | |
| 13017 | | |
| 13018 | | > view matrix models |
| 13019 | | > #4,0.59131,0.30362,0.74711,68.062,-0.58936,-0.46966,0.65732,108.17,0.55046,-0.829,-0.098769,183.52 |
| 13020 | | |
| 13021 | | > fitmap #4 inMap #1 |
| 13022 | | |
| 13023 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 13024 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 13025 | | average map value = 0.07762, steps = 116 |
| 13026 | | shifted from previous position = 2.22 |
| 13027 | | rotated from previous position = 8.67 degrees |
| 13028 | | atoms outside contour = 1733, contour level = 0.062298 |
| 13029 | | |
| 13030 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 13031 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13032 | | Matrix rotation and translation |
| 13033 | | -0.86294436 -0.37154055 0.34246847 134.90553384 |
| 13034 | | -0.50270762 0.69981064 -0.50749395 116.66361845 |
| 13035 | | -0.05110850 -0.61010055 -0.79067391 114.61956235 |
| 13036 | | Axis -0.24009461 0.92095155 -0.30692477 |
| 13037 | | Axis point 90.10436360 0.00000000 68.27157439 |
| 13038 | | Rotation angle (degrees) 167.66193091 |
| 13039 | | Shift along axis 39.87186552 |
| 13040 | | |
| 13041 | | |
| 13042 | | > view matrix models |
| 13043 | | > #4,-0.71862,-0.072319,-0.69163,47.632,0.63434,-0.4757,-0.60936,99.142,-0.28494,-0.87663,0.38772,189.55 |
| 13044 | | |
| 13045 | | > ui mousemode right translate |
| 13046 | | |
| 13047 | | > ui mousemode right "translate selected models" |
| 13048 | | |
| 13049 | | > view matrix models |
| 13050 | | > #4,-0.71862,-0.072319,-0.69163,41.734,0.63434,-0.4757,-0.60936,104.06,-0.28494,-0.87663,0.38772,187.88 |
| 13051 | | |
| 13052 | | > fitmap #4 inMap #1 |
| 13053 | | |
| 13054 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 13055 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 13056 | | average map value = 0.08204, steps = 80 |
| 13057 | | shifted from previous position = 4.02 |
| 13058 | | rotated from previous position = 6.14 degrees |
| 13059 | | atoms outside contour = 1654, contour level = 0.062298 |
| 13060 | | |
| 13061 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 13062 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13063 | | Matrix rotation and translation |
| 13064 | | 0.93542276 -0.21497113 -0.28066290 138.08586575 |
| 13065 | | 0.32669983 0.82900607 0.45389002 130.75569300 |
| 13066 | | 0.13509800 -0.51627158 0.84570218 134.86626519 |
| 13067 | | Axis -0.81775510 -0.35044738 0.45657774 |
| 13068 | | Axis point 0.00000000 369.26238280 -73.94375049 |
| 13069 | | Rotation angle (degrees) 36.38341744 |
| 13070 | | Shift along axis -97.16647645 |
| 13071 | | |
| 13072 | | |
| 13073 | | > view matrix models |
| 13074 | | > #4,-0.6819,0.00014596,-0.73144,36.092,0.66243,-0.4239,-0.61765,110.29,-0.31015,-0.90571,0.28896,183.24 |
| 13075 | | |
| 13076 | | > fitmap #4 inMap #1 |
| 13077 | | |
| 13078 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 13079 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 13080 | | average map value = 0.07837, steps = 72 |
| 13081 | | shifted from previous position = 2.52 |
| 13082 | | rotated from previous position = 11 degrees |
| 13083 | | atoms outside contour = 1722, contour level = 0.062298 |
| 13084 | | |
| 13085 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 13086 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13087 | | Matrix rotation and translation |
| 13088 | | 0.95946224 -0.26041157 -0.10778690 151.00667345 |
| 13089 | | 0.28157312 0.86914050 0.40658501 131.92583818 |
| 13090 | | -0.01219748 -0.42045286 0.90723239 138.97035955 |
| 13091 | | Axis -0.83251874 -0.09622290 0.54557648 |
| 13092 | | Axis point 0.00000000 448.23568447 -165.39525748 |
| 13093 | | Rotation angle (degrees) 29.78245805 |
| 13094 | | Shift along axis -62.59121295 |
| 13095 | | |
| 13096 | | |
| 13097 | | > view matrix models |
| 13098 | | > #4,-0.56258,-0.070563,-0.82373,41.613,0.73395,-0.50125,-0.45833,105.67,-0.38055,-0.86242,0.33378,186.82 |
| 13099 | | |
| 13100 | | > fitmap #4 inMap #1 |
| 13101 | | |
| 13102 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 13103 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 13104 | | average map value = 0.08204, steps = 72 |
| 13105 | | shifted from previous position = 3.82 |
| 13106 | | rotated from previous position = 11 degrees |
| 13107 | | atoms outside contour = 1655, contour level = 0.062298 |
| 13108 | | |
| 13109 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 13110 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13111 | | Matrix rotation and translation |
| 13112 | | 0.93533321 -0.21505147 -0.28089971 138.07829043 |
| 13113 | | 0.32686068 0.82907436 0.45364942 130.76205752 |
| 13114 | | 0.13532877 -0.51612844 0.84575265 134.85364765 |
| 13115 | | Axis -0.81745896 -0.35085323 0.45679630 |
| 13116 | | Axis point 0.00000000 369.35971032 -73.94096687 |
| 13117 | | Rotation angle (degrees) 36.38200702 |
| 13118 | | Shift along axis -97.15097946 |
| 13119 | | |
| 13120 | | |
| 13121 | | > ui mousemode right "rotate selected models" |
| 13122 | | |
| 13123 | | > view matrix models |
| 13124 | | > #4,-0.89754,0.36691,-0.24456,46.975,0.0296,-0.50324,-0.86364,97.638,-0.43995,-0.78239,0.44082,186.01 |
| 13125 | | |
| 13126 | | > fitmap #4 inMap #1 |
| 13127 | | |
| 13128 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 13129 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 13130 | | average map value = 0.07912, steps = 104 |
| 13131 | | shifted from previous position = 2.24 |
| 13132 | | rotated from previous position = 8.6 degrees |
| 13133 | | atoms outside contour = 1664, contour level = 0.062298 |
| 13134 | | |
| 13135 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 13136 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13137 | | Matrix rotation and translation |
| 13138 | | 0.48054342 -0.45935542 -0.74704124 130.37491847 |
| 13139 | | 0.84870611 0.45811958 0.26424301 132.33548308 |
| 13140 | | 0.22085276 -0.76099871 0.61000411 133.15638418 |
| 13141 | | Axis -0.53307240 -0.50325456 0.68012400 |
| 13142 | | Axis point 10.77208451 218.79770957 0.00000000 |
| 13143 | | Rotation angle (degrees) 74.07769751 |
| 13144 | | Shift along axis -45.53485356 |
| 13145 | | |
| 13146 | | |
| 13147 | | > view matrix models |
| 13148 | | > #4,-0.57071,-0.29447,0.76654,63.274,0.099067,-0.95136,-0.29171,104.53,0.81515,-0.090543,0.57213,192.17 |
| 13149 | | |
| 13150 | | > fitmap #4 inMap #1 |
| 13151 | | |
| 13152 | | Fit molecule 2qe3-assembly1.cif (#4) to map |
| 13153 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) using 3543 atoms |
| 13154 | | average map value = 0.08666, steps = 68 |
| 13155 | | shifted from previous position = 2.07 |
| 13156 | | rotated from previous position = 3.22 degrees |
| 13157 | | atoms outside contour = 1565, contour level = 0.062298 |
| 13158 | | |
| 13159 | | Position of 2qe3-assembly1.cif (#4) relative to |
| 13160 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13161 | | Matrix rotation and translation |
| 13162 | | 0.24067597 -0.67472861 -0.69772228 129.56045750 |
| 13163 | | -0.32119539 0.62298457 -0.71324872 115.92664363 |
| 13164 | | 0.91591953 0.39576701 -0.06678231 127.90751518 |
| 13165 | | Axis 0.55738995 -0.81101440 0.17768536 |
| 13166 | | Axis point 33.49246614 0.00000000 148.50226921 |
| 13167 | | Rotation angle (degrees) 95.82906030 |
| 13168 | | Shift along axis 0.92481284 |
| 13169 | | |
| 13170 | | |
| 13171 | | > ui mousemode right translate |
| 13172 | | |
| 13173 | | > ui mousemode right "rotate selected models" |
| 13174 | | |
| 13175 | | Opened 2qe3-assembly1.cif map 5 as #5, grid size 54,54,54, pixel 1.67, shown |
| 13176 | | at level 0.105, step 1, values float32 |
| 13177 | | Opened 2qe3-assembly1.cif map 5 as #6, grid size 54,54,54, pixel 1.67, shown |
| 13178 | | at level 0.105, step 1, values float32 |
| 13179 | | |
| 13180 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13181 | | |
| 13182 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13183 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13184 | | correlation = 0.6307, correlation about mean = 0.07475, overlap = 406.5 |
| 13185 | | steps = 52, shift = 2.43, angle = 2.36 degrees |
| 13186 | | |
| 13187 | | Position of 2qe3-assembly1.cif map 5 (#6) relative to |
| 13188 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13189 | | Matrix rotation and translation |
| 13190 | | 0.27753913 -0.65681430 -0.70111839 127.86607492 |
| 13191 | | -0.32095377 0.62446886 -0.71205850 114.75825466 |
| 13192 | | 0.90551681 0.42265069 -0.03749249 126.97174887 |
| 13193 | | Axis 0.56866089 -0.80516719 0.16831691 |
| 13194 | | Axis point 30.94641133 0.00000000 149.11986598 |
| 13195 | | Rotation angle (degrees) 93.88431964 |
| 13196 | | Shift along axis 1.68434735 |
| 13197 | | |
| 13198 | | Average map value = 0.08636 for 3543 atoms, 1527 outside contour |
| 13199 | | |
| 13200 | | > view matrix models |
| 13201 | | > #4,-0.59229,-0.36615,0.71772,63.977,0.19262,-0.92929,-0.31513,102.66,0.78236,-0.048403,0.62094,193.94 |
| 13202 | | |
| 13203 | | > ui mousemode right "translate selected models" |
| 13204 | | |
| 13205 | | > view matrix models |
| 13206 | | > #4,-0.59229,-0.36615,0.71772,63.622,0.19262,-0.92929,-0.31513,102.08,0.78236,-0.048403,0.62094,193.81 |
| 13207 | | |
| 13208 | | > ui mousemode right "rotate selected models" |
| 13209 | | |
| 13210 | | > view matrix models |
| 13211 | | > #4,-0.81811,-0.45471,-0.35204,52.598,0.5067,-0.85949,-0.067353,105.95,-0.27195,-0.23348,0.93356,191.4 |
| 13212 | | |
| 13213 | | > view matrix models |
| 13214 | | > #4,-0.61273,-0.49165,-0.61874,51.433,0.50128,-0.84706,0.17666,108.16,-0.61096,-0.20192,0.76548,187.71 |
| 13215 | | |
| 13216 | | > view matrix models |
| 13217 | | > #4,-0.44941,-0.48625,-0.7494,51.129,0.43222,-0.85251,0.29395,108.89,-0.7818,-0.1918,0.59329,185.05 |
| 13218 | | |
| 13219 | | > view matrix models |
| 13220 | | > #4,-0.27879,-0.50582,-0.81635,51.572,0.35536,-0.84405,0.40163,109.42,-0.89219,-0.17813,0.41506,182.67 |
| 13221 | | |
| 13222 | | > view matrix models |
| 13223 | | > #4,0.056724,-0.4682,-0.8818,52.749,0.16449,-0.86677,0.4708,109.06,-0.98475,-0.17175,0.027847,178.46 |
| 13224 | | |
| 13225 | | > view matrix models |
| 13226 | | > #4,0.35759,-0.42607,-0.83102,54.801,-0.0094902,-0.89147,0.45298,107.98,-0.93383,-0.1541,-0.32283,175.38 |
| 13227 | | |
| 13228 | | > view matrix models |
| 13229 | | > #4,0.68963,-0.17511,-0.70267,56.895,-0.048375,-0.9793,0.19656,105.71,-0.72254,-0.10157,-0.68382,172.99 |
| 13230 | | |
| 13231 | | > view matrix models |
| 13232 | | > #4,0.87365,0.47414,-0.10919,60.849,0.44094,-0.86643,-0.23425,104.02,-0.20567,0.15651,-0.96602,172.26 |
| 13233 | | |
| 13234 | | > view matrix models |
| 13235 | | > #4,0.84401,0.36914,0.38908,65.81,0.52724,-0.70404,-0.47575,101.57,0.098315,0.60668,-0.78884,173.82 |
| 13236 | | |
| 13237 | | > view matrix models |
| 13238 | | > #4,0.92558,-0.24358,0.28978,67.903,0.17467,-0.40435,-0.89777,94.293,0.33585,0.88157,-0.33171,178.36 |
| 13239 | | |
| 13240 | | > view matrix models |
| 13241 | | > #4,0.73573,-0.63619,0.23229,67.895,0.20848,-0.11359,-0.97141,92.584,0.64439,0.76312,0.049065,184.23 |
| 13242 | | |
| 13243 | | > view matrix models |
| 13244 | | > #4,0.49371,-0.86762,0.059063,65.821,0.3209,0.11864,-0.93965,92.568,0.80825,0.48287,0.33699,189.07 |
| 13245 | | |
| 13246 | | > view matrix models |
| 13247 | | > #4,0.31281,-0.94714,-0.071214,63.873,0.42513,0.20667,-0.88122,93.358,0.84936,0.24538,0.4673,191.53 |
| 13248 | | |
| 13249 | | > view matrix models |
| 13250 | | > #4,0.083793,-0.98279,-0.16463,61.81,0.54636,0.18348,-0.81721,94.762,0.83335,-0.021474,0.55233,193.35 |
| 13251 | | |
| 13252 | | > view matrix models |
| 13253 | | > #4,-0.57834,-0.68271,-0.44657,54.052,0.80179,-0.37472,-0.46552,101.89,0.15048,-0.62729,0.76411,193.9 |
| 13254 | | |
| 13255 | | > view matrix models |
| 13256 | | > #4,-0.50145,-0.30524,-0.80956,49.505,0.76055,-0.60158,-0.24427,104.68,-0.41245,-0.7382,0.53381,188.92 |
| 13257 | | |
| 13258 | | > view matrix models |
| 13259 | | > #4,-0.34911,-0.11113,-0.93047,48.442,0.67393,-0.71969,-0.1669,105.4,-0.6511,-0.68534,0.32615,185.35 |
| 13260 | | |
| 13261 | | > view matrix models |
| 13262 | | > #4,-0.23439,0.0045204,-0.97213,48.234,0.60226,-0.78429,-0.14886,105.42,-0.76311,-0.62037,0.18111,183.06 |
| 13263 | | |
| 13264 | | > view matrix models |
| 13265 | | > #4,0.023839,0.12174,-0.99228,49.057,0.4537,-0.88577,-0.097774,105.46,-0.89084,-0.44787,-0.07635,179.18 |
| 13266 | | |
| 13267 | | > view matrix models |
| 13268 | | > #4,0.20016,0.39541,-0.89643,49.844,0.37273,-0.87688,-0.30357,103.01,-0.9061,-0.27336,-0.32289,176.04 |
| 13269 | | |
| 13270 | | > view matrix models |
| 13271 | | > #4,0.57468,0.32776,-0.74988,53.685,0.094996,-0.93682,-0.33666,101.34,-0.81285,0.12224,-0.56951,172.61 |
| 13272 | | |
| 13273 | | > view matrix models |
| 13274 | | > #4,0.048884,0.62504,-0.77906,49.113,0.55056,-0.66765,-0.50112,101.31,-0.83336,-0.40442,-0.37676,176.5 |
| 13275 | | |
| 13276 | | > view matrix models |
| 13277 | | > #4,0.11239,0.98182,-0.15295,53.894,0.51593,-0.18921,-0.83547,95.968,-0.84922,0.014987,-0.52782,173.23 |
| 13278 | | |
| 13279 | | > view matrix models |
| 13280 | | > #4,0.04075,0.91148,0.40932,59.068,0.54786,0.32221,-0.77203,94.618,-0.83557,0.25571,-0.48624,172.7 |
| 13281 | | |
| 13282 | | > view matrix models |
| 13283 | | > #4,-0.12152,0.7488,0.65156,61.086,0.58465,0.58447,-0.56265,95.711,-0.80213,0.31256,-0.50881,172.45 |
| 13284 | | |
| 13285 | | > view matrix models |
| 13286 | | > #4,-0.26544,0.59012,0.76243,61.955,0.58792,0.72583,-0.3571,97.078,-0.76412,0.35346,-0.53961,172.21 |
| 13287 | | |
| 13288 | | > view matrix models |
| 13289 | | > #4,-0.40762,0.44018,0.80006,62.109,0.56971,0.80731,-0.15391,98.546,-0.71364,0.39306,-0.57984,171.96 |
| 13290 | | |
| 13291 | | > view matrix models |
| 13292 | | > #4,-0.51571,0.31093,0.79835,62.003,0.53112,0.84719,0.013133,99.73,-0.67227,0.4308,-0.60205,171.83 |
| 13293 | | |
| 13294 | | > view matrix models |
| 13295 | | > #4,-0.70381,-0.4897,0.51463,61.575,0.23896,0.51903,0.82068,107.01,-0.669,0.70057,-0.24828,174.06 |
| 13296 | | |
| 13297 | | > view matrix models |
| 13298 | | > #4,-0.52722,-0.43964,0.72716,64.395,0.2471,0.73944,0.62623,104.3,-0.81301,0.50984,-0.28121,173.7 |
| 13299 | | |
| 13300 | | > view matrix models |
| 13301 | | > #4,-0.097114,0.013462,0.99518,67.532,0.47776,0.8778,0.034748,99.496,-0.8731,0.47884,-0.091679,175.27 |
| 13302 | | |
| 13303 | | > view matrix models |
| 13304 | | > #4,0.34129,0.44289,0.82908,66.725,0.42,0.71723,-0.55604,94.263,-0.84091,0.53798,0.058765,176.63 |
| 13305 | | |
| 13306 | | > view matrix models |
| 13307 | | > #4,0.61848,0.7098,0.33715,62.589,0.21063,0.2636,-0.94135,91.306,-0.75704,0.65323,0.013527,176.21 |
| 13308 | | |
| 13309 | | > view matrix models |
| 13310 | | > #4,0.70413,0.70428,0.090538,60.786,0.045623,0.08237,-0.99556,90.592,-0.70861,0.70513,0.025867,176.39 |
| 13311 | | |
| 13312 | | > view matrix models |
| 13313 | | > #4,0.79252,0.5886,0.15956,62.432,-0.031193,0.30042,-0.9533,89.634,-0.60905,0.75053,0.25645,178.95 |
| 13314 | | |
| 13315 | | > ui mousemode right "translate selected models" |
| 13316 | | |
| 13317 | | > view matrix models |
| 13318 | | > #4,0.79252,0.5886,0.15956,63.002,-0.031193,0.30042,-0.9533,92.531,-0.60905,0.75053,0.25645,175.67 |
| 13319 | | |
| 13320 | | > view matrix models |
| 13321 | | > #4,0.79252,0.5886,0.15956,64.293,-0.031193,0.30042,-0.9533,96.717,-0.60905,0.75053,0.25645,173.59 |
| 13322 | | |
| 13323 | | > view matrix models |
| 13324 | | > #4,0.79252,0.5886,0.15956,64.881,-0.031193,0.30042,-0.9533,99.947,-0.60905,0.75053,0.25645,169.65 |
| 13325 | | |
| 13326 | | > ui mousemode right "rotate selected models" |
| 13327 | | |
| 13328 | | > view matrix models |
| 13329 | | > #4,-0.4778,-0.49227,0.72759,67.354,0.12432,0.78202,0.61073,113.58,-0.86963,0.38226,-0.31245,164.31 |
| 13330 | | |
| 13331 | | > view matrix models |
| 13332 | | > #4,-0.79448,0.14306,-0.5902,50.447,-0.58649,-0.43291,0.68455,115.21,-0.15757,0.89001,0.42785,173.31 |
| 13333 | | |
| 13334 | | > view matrix models |
| 13335 | | > #4,-0.6746,-0.11196,-0.72964,50.893,-0.60656,-0.47926,0.63435,114.81,-0.42071,0.8705,0.2554,170.24 |
| 13336 | | |
| 13337 | | > view matrix models |
| 13338 | | > #4,-0.65135,-0.62295,-0.43321,55.953,-0.52681,-0.039633,0.84906,115.47,-0.54609,0.78125,-0.30236,164.63 |
| 13339 | | |
| 13340 | | > view matrix models |
| 13341 | | > #4,-0.59446,-0.45758,0.66124,65.906,0.13785,0.75214,0.64442,114.1,-0.79222,0.47424,-0.38404,163.7 |
| 13342 | | |
| 13343 | | > view matrix models |
| 13344 | | > #4,-0.31358,0.039046,0.94876,68.177,0.35873,0.92998,0.080293,109.33,-0.87919,0.36553,-0.30563,164.39 |
| 13345 | | |
| 13346 | | > view matrix models |
| 13347 | | > #4,-0.13125,0.30485,0.94331,68.078,0.39149,0.89014,-0.2332,106.73,-0.91077,0.3387,-0.23618,164.97 |
| 13348 | | |
| 13349 | | > view matrix models |
| 13350 | | > #4,-0.35354,0.89704,0.2652,57.926,0.87661,0.41666,-0.24073,111.45,-0.32644,0.14736,-0.93366,162.6 |
| 13351 | | |
| 13352 | | > view matrix models |
| 13353 | | > #4,-0.93994,-0.34071,0.020499,57.373,-0.33153,0.92559,0.18267,106.3,-0.081212,0.16491,-0.98296,163.49 |
| 13354 | | |
| 13355 | | > view matrix models |
| 13356 | | > #4,0.24121,-0.62716,-0.7406,58.263,-0.92238,-0.38541,0.025955,106.85,-0.30171,0.67685,-0.67145,163 |
| 13357 | | |
| 13358 | | > view matrix models |
| 13359 | | > #4,0.84381,0.18725,-0.50291,60.61,-0.18911,-0.77328,-0.60521,106.79,-0.50221,0.60579,-0.61709,162.65 |
| 13360 | | |
| 13361 | | > view matrix models |
| 13362 | | > #4,0.27877,0.55127,-0.78637,53.136,0.38317,-0.81468,-0.43529,111.89,-0.88061,-0.17997,-0.43834,165.41 |
| 13363 | | |
| 13364 | | > view matrix models |
| 13365 | | > #4,0.86385,0.42582,0.26915,67.007,0.071292,0.42557,-0.90211,100.5,-0.49867,0.79848,0.33727,170.86 |
| 13366 | | |
| 13367 | | > view matrix models |
| 13368 | | > #4,0.86209,-0.42584,-0.27468,65.424,0.46232,0.88289,0.082261,110.14,0.20748,-0.19791,0.95801,184.97 |
| 13369 | | |
| 13370 | | > view matrix models |
| 13371 | | > #4,0.71128,-0.043249,-0.70158,58.929,0.62657,0.49136,0.60495,117.66,0.31856,-0.86988,0.3766,182.94 |
| 13372 | | |
| 13373 | | > view matrix models |
| 13374 | | > #4,0.73104,0.37744,-0.56843,58.544,0.56461,0.13317,0.81455,120.77,0.38314,-0.91641,-0.11575,178.87 |
| 13375 | | |
| 13376 | | > view matrix models |
| 13377 | | > #4,0.75651,0.65195,-0.051482,62.418,0.39699,-0.39525,0.82836,122.12,0.5197,-0.6471,-0.55783,174.37 |
| 13378 | | |
| 13379 | | > view matrix models |
| 13380 | | > #4,0.53567,0.70372,0.46673,65.801,0.60756,-0.70505,0.36575,120.28,0.58646,0.087648,-0.80523,169.36 |
| 13381 | | |
| 13382 | | > view matrix models |
| 13383 | | > #4,0.31503,0.77597,0.54647,64.969,0.78724,-0.53524,0.3062,120.06,0.5301,0.33374,-0.7795,168.25 |
| 13384 | | |
| 13385 | | > view matrix models |
| 13386 | | > #4,-0.47255,0.70595,-0.52757,50.561,0.49725,0.70781,0.50174,115.03,0.72762,-0.025231,-0.68551,171.78 |
| 13387 | | |
| 13388 | | > view matrix models |
| 13389 | | > #4,-0.54185,-0.053705,-0.83876,50.394,-0.018396,0.99848,-0.052048,105.6,0.84027,-0.012773,-0.54201,173.74 |
| 13390 | | |
| 13391 | | > view matrix models |
| 13392 | | > #4,-0.8745,-0.26047,-0.40916,53.37,0.12861,0.68885,-0.71341,101.52,0.46767,-0.6765,-0.5689,174.09 |
| 13393 | | |
| 13394 | | > ui mousemode right "move picked models" |
| 13395 | | |
| 13396 | | > ui mousemode right "rotate selected models" |
| 13397 | | |
| 13398 | | > view matrix models |
| 13399 | | > #4,-0.60106,0.10889,-0.79175,49.815,0.51435,0.81094,-0.27895,107.34,0.61169,-0.57491,-0.54344,174.74 |
| 13400 | | |
| 13401 | | > view matrix models |
| 13402 | | > #4,0.021023,0.68811,-0.72531,51.642,0.83236,0.38983,0.39396,117.29,0.55383,-0.612,-0.56456,174.36 |
| 13403 | | |
| 13404 | | > view matrix models |
| 13405 | | > #4,0.72756,0.46289,0.50635,68.295,0.16509,-0.83451,0.52568,119.76,0.66589,-0.29887,-0.68357,172.58 |
| 13406 | | |
| 13407 | | > ui mousemode right "translate selected models" |
| 13408 | | |
| 13409 | | > view matrix models |
| 13410 | | > #4,0.72756,0.46289,0.50635,66.162,0.16509,-0.83451,0.52568,113.92,0.66589,-0.29887,-0.68357,178.35 |
| 13411 | | |
| 13412 | | > ui mousemode right "rotate selected models" |
| 13413 | | |
| 13414 | | > view matrix models |
| 13415 | | > #4,0.50948,0.15578,0.84627,69.378,-0.61016,-0.62807,0.48295,108.15,0.60674,-0.76241,-0.22494,184.26 |
| 13416 | | |
| 13417 | | > view matrix models |
| 13418 | | > #4,0.13514,0.40285,0.90523,66.727,-0.90514,-0.32146,0.27819,103.23,0.40307,-0.85696,0.32119,188.61 |
| 13419 | | |
| 13420 | | > ui mousemode right "translate selected models" |
| 13421 | | |
| 13422 | | > view matrix models |
| 13423 | | > #4,0.13514,0.40285,0.90523,65.811,-0.90514,-0.32146,0.27819,114.56,0.40307,-0.85696,0.32119,182.29 |
| 13424 | | |
| 13425 | | > view matrix models |
| 13426 | | > #4,0.13514,0.40285,0.90523,66.431,-0.90514,-0.32146,0.27819,104.73,0.40307,-0.85696,0.32119,187.94 |
| 13427 | | |
| 13428 | | > view matrix models |
| 13429 | | > #4,0.13514,0.40285,0.90523,66.558,-0.90514,-0.32146,0.27819,102.4,0.40307,-0.85696,0.32119,183.58 |
| 13430 | | |
| 13431 | | > ui mousemode right translate |
| 13432 | | |
| 13433 | | > volume #1 step 4 |
| 13434 | | |
| 13435 | | > ui mousemode right "translate selected models" |
| 13436 | | |
| 13437 | | > view matrix models |
| 13438 | | > #4,0.13514,0.40285,0.90523,66.625,-0.90514,-0.32146,0.27819,107.8,0.40307,-0.85696,0.32119,182.01 |
| 13439 | | |
| 13440 | | > view matrix models |
| 13441 | | > #4,0.13514,0.40285,0.90523,66.631,-0.90514,-0.32146,0.27819,105.95,0.40307,-0.85696,0.32119,181.28 |
| 13442 | | |
| 13443 | | > view matrix models |
| 13444 | | > #4,0.13514,0.40285,0.90523,66.516,-0.90514,-0.32146,0.27819,101.68,0.40307,-0.85696,0.32119,185.26 |
| 13445 | | |
| 13446 | | > ui mousemode right "rotate selected models" |
| 13447 | | |
| 13448 | | > view matrix models |
| 13449 | | > #4,0.06279,0.32289,0.94435,66.798,-0.91616,-0.35667,0.18287,100.86,0.39586,-0.87666,0.27342,184.85 |
| 13450 | | |
| 13451 | | > view matrix models |
| 13452 | | > #4,0.69532,0.465,0.548,66.148,-0.58032,-0.086575,0.80978,107.6,0.42399,-0.88107,0.20965,184.43 |
| 13453 | | |
| 13454 | | > view matrix models |
| 13455 | | > #4,-0.51677,0.77156,0.37101,56.155,-0.20325,-0.53153,0.82229,111.76,0.83165,0.34953,0.43149,183.76 |
| 13456 | | |
| 13457 | | > view matrix models |
| 13458 | | > #4,-0.87305,0.41159,0.26149,54.552,-0.076071,-0.64464,0.76069,112.39,0.48166,0.64423,0.59411,182.03 |
| 13459 | | |
| 13460 | | > volume #1 level 0.07121 |
| 13461 | | |
| 13462 | | > view matrix models |
| 13463 | | > #4,-0.84302,0.42698,0.3271,55.281,-0.044537,-0.66146,0.74866,112.53,0.53603,0.61657,0.57664,182.29 |
| 13464 | | |
| 13465 | | > volume #1 level 0.06994 |
| 13466 | | |
| 13467 | | > volume #1 step 1 |
| 13468 | | |
| 13469 | | > volume #1 level 0.06124 |
| 13470 | | |
| 13471 | | > volume #1 step 2 |
| 13472 | | |
| 13473 | | > view matrix models |
| 13474 | | > #4,-0.57418,-0.74604,0.33726,61.831,0.80617,-0.44328,0.39192,113.21,-0.14289,0.49692,0.85595,181.48 |
| 13475 | | |
| 13476 | | > view matrix models |
| 13477 | | > #4,0.24236,-0.91655,0.31812,67.11,0.95068,0.28978,0.11064,108.34,-0.19359,0.27562,0.94157,182.91 |
| 13478 | | |
| 13479 | | > view matrix models |
| 13480 | | > #4,0.82192,-0.5327,0.20169,67.782,0.55863,0.82304,-0.10269,101.83,-0.1113,0.19708,0.97405,184.02 |
| 13481 | | |
| 13482 | | > view matrix models |
| 13483 | | > #4,0.95547,-0.28101,0.09002,66.456,0.29215,0.94377,-0.15478,99.286,-0.041464,0.17418,0.98384,184.62 |
| 13484 | | |
| 13485 | | > view matrix models |
| 13486 | | > #4,0.99332,-0.10665,0.044135,65.517,0.11272,0.97858,-0.17225,97.933,-0.024819,0.17607,0.98406,184.71 |
| 13487 | | |
| 13488 | | > view matrix models |
| 13489 | | > #4,0.9984,0.056183,0.0055947,64.504,-0.054255,0.9821,-0.18036,96.871,-0.015628,0.17977,0.98359,184.74 |
| 13490 | | |
| 13491 | | > view matrix models |
| 13492 | | > #4,0.98285,0.18086,-0.035908,63.503,-0.18438,0.96598,-0.18136,96.172,0.001884,0.18488,0.98276,184.81 |
| 13493 | | |
| 13494 | | > view matrix models |
| 13495 | | > #4,0.98896,-0.11263,0.096248,66.007,0.12756,0.97775,-0.16654,98.076,-0.075349,0.17698,0.98133,184.38 |
| 13496 | | |
| 13497 | | > view matrix models |
| 13498 | | > #4,0.39824,-0.46065,-0.79322,55.643,0.31818,0.88044,-0.35156,97.847,0.86033,-0.11238,0.4972,186.47 |
| 13499 | | |
| 13500 | | > view matrix models |
| 13501 | | > #4,-0.67029,0.070295,-0.73876,47.73,0.40063,0.87225,-0.2805,99.03,0.62466,-0.48399,-0.61282,176.19 |
| 13502 | | |
| 13503 | | > view matrix models |
| 13504 | | > #4,-0.83212,0.18163,-0.52401,48.348,0.38149,0.87326,-0.30312,98.701,0.40254,-0.45213,-0.79595,173.04 |
| 13505 | | |
| 13506 | | > view matrix models |
| 13507 | | > #4,-0.81516,0.21646,-0.53728,48.176,0.41878,0.86105,-0.28848,99.107,0.40018,-0.46016,-0.79253,173.09 |
| 13508 | | |
| 13509 | | > view matrix models |
| 13510 | | > #4,-0.82455,0.24778,-0.50865,48.261,0.43557,0.85177,-0.29116,99.218,0.36111,-0.46163,-0.81025,172.7 |
| 13511 | | |
| 13512 | | > ui mousemode right "translate selected models" |
| 13513 | | |
| 13514 | | > view matrix models |
| 13515 | | > #4,-0.82455,0.24778,-0.50865,50.178,0.43557,0.85177,-0.29116,104.51,0.36111,-0.46163,-0.81025,174.98 |
| 13516 | | |
| 13517 | | > view matrix models |
| 13518 | | > #4,-0.82455,0.24778,-0.50865,49.665,0.43557,0.85177,-0.29116,102.17,0.36111,-0.46163,-0.81025,171.84 |
| 13519 | | |
| 13520 | | > view matrix models |
| 13521 | | > #4,-0.82455,0.24778,-0.50865,48.249,0.43557,0.85177,-0.29116,100.29,0.36111,-0.46163,-0.81025,167.02 |
| 13522 | | |
| 13523 | | > view matrix models |
| 13524 | | > #4,-0.82455,0.24778,-0.50865,46.55,0.43557,0.85177,-0.29116,100.35,0.36111,-0.46163,-0.81025,160.84 |
| 13525 | | |
| 13526 | | > ui mousemode right translate |
| 13527 | | |
| 13528 | | > ui mousemode right "translate selected models" |
| 13529 | | |
| 13530 | | > view matrix models |
| 13531 | | > #4,-0.82455,0.24778,-0.50865,43.384,0.43557,0.85177,-0.29116,104.82,0.36111,-0.46163,-0.81025,169.54 |
| 13532 | | |
| 13533 | | > view matrix models |
| 13534 | | > #4,-0.82455,0.24778,-0.50865,43.591,0.43557,0.85177,-0.29116,105.3,0.36111,-0.46163,-0.81025,168.77 |
| 13535 | | |
| 13536 | | > ui mousemode right "rotate selected models" |
| 13537 | | |
| 13538 | | > view matrix models |
| 13539 | | > #4,-0.83312,0.3761,-0.40553,43.978,0.50346,0.81925,-0.27451,105.99,0.22899,-0.43287,-0.87189,167.3 |
| 13540 | | |
| 13541 | | > ui mousemode right "translate selected atoms" |
| 13542 | | |
| 13543 | | > ui mousemode right "rotate selected models" |
| 13544 | | |
| 13545 | | Opened 2qe3-assembly1.cif map 5 as #5, grid size 54,54,54, pixel 1.67, shown |
| 13546 | | at level 0.105, step 1, values float32 |
| 13547 | | |
| 13548 | | > view matrix models |
| 13549 | | > #4,-0.94759,0.31923,0.012853,50.055,0.28423,0.8607,-0.42238,102.94,-0.1459,-0.39659,-0.90633,165.47 |
| 13550 | | |
| 13551 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13552 | | |
| 13553 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13554 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13555 | | correlation = 0.5999, correlation about mean = 0.03474, overlap = 363.1 |
| 13556 | | steps = 124, shift = 10.1, angle = 11.8 degrees |
| 13557 | | |
| 13558 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13559 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13560 | | Matrix rotation and translation |
| 13561 | | 0.62731096 0.67433457 -0.38955596 128.23314889 |
| 13562 | | 0.66471425 -0.20301056 0.71898655 135.95276667 |
| 13563 | | 0.40575352 -0.70997154 -0.57559055 115.19315529 |
| 13564 | | Axis -0.87376708 -0.48630904 -0.00588255 |
| 13565 | | Axis point 0.00000000 66.18754882 42.61884660 |
| 13566 | | Rotation angle (degrees) 125.14481986 |
| 13567 | | Shift along axis -178.83859306 |
| 13568 | | |
| 13569 | | Average map value = 0.07734 for 3543 atoms, 1608 outside contour |
| 13570 | | |
| 13571 | | > view matrix models |
| 13572 | | > #4,-0.92453,0.38105,-0.0071284,57.574,0.28182,0.67094,-0.68587,94.989,-0.25657,-0.63612,-0.72769,173.1 |
| 13573 | | |
| 13574 | | > view matrix models |
| 13575 | | > #4,-0.92885,0.36899,-0.033016,57.213,0.28657,0.65915,-0.69527,94.903,-0.23479,-0.65526,-0.71799,173.38 |
| 13576 | | |
| 13577 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13578 | | |
| 13579 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13580 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13581 | | correlation = 0.608, correlation about mean = 0.0316, overlap = 375.4 |
| 13582 | | steps = 160, shift = 3.1, angle = 11.1 degrees |
| 13583 | | |
| 13584 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13585 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13586 | | Matrix rotation and translation |
| 13587 | | 0.67793482 0.40678763 -0.61231380 122.91965051 |
| 13588 | | 0.64463710 0.07138782 0.76114832 136.23775027 |
| 13589 | | 0.35333747 -0.91072916 -0.21383411 122.17429575 |
| 13590 | | Axis -0.85944035 -0.49639981 0.12226819 |
| 13591 | | Axis point 0.00000000 97.61424026 43.36110280 |
| 13592 | | Rotation angle (degrees) 103.42991266 |
| 13593 | | Shift along axis -158.33247073 |
| 13594 | | |
| 13595 | | Average map value = 0.07913 for 3543 atoms, 1580 outside contour |
| 13596 | | |
| 13597 | | > view matrix models |
| 13598 | | > #4,-0.82947,0.53329,-0.16611,55.197,0.34273,0.25112,-0.90525,90.122,-0.44104,-0.8078,-0.39107,178.91 |
| 13599 | | |
| 13600 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13601 | | |
| 13602 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13603 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13604 | | correlation = 0.6252, correlation about mean = 0.08255, overlap = 377.4 |
| 13605 | | steps = 140, shift = 5.65, angle = 11.1 degrees |
| 13606 | | |
| 13607 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13608 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13609 | | Matrix rotation and translation |
| 13610 | | 0.77442587 0.00836819 -0.63260931 119.95063528 |
| 13611 | | 0.59800867 0.31671698 0.73625809 135.39201846 |
| 13612 | | 0.20651926 -0.94848317 0.24026957 132.45531589 |
| 13613 | | Axis -0.85417953 -0.42544601 0.29895322 |
| 13614 | | Axis point 0.00000000 154.39031623 28.99927093 |
| 13615 | | Rotation angle (degrees) 80.46173794 |
| 13616 | | Shift along axis -120.46342806 |
| 13617 | | |
| 13618 | | Average map value = 0.08035 for 3543 atoms, 1597 outside contour |
| 13619 | | |
| 13620 | | > view matrix models |
| 13621 | | > #4,-0.64044,0.65132,-0.40696,50.671,0.43472,-0.1294,-0.89122,87.067,-0.63313,-0.74768,-0.20027,183.93 |
| 13622 | | |
| 13623 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13624 | | |
| 13625 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13626 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13627 | | correlation = 0.6195, correlation about mean = 0.05943, overlap = 372.6 |
| 13628 | | steps = 112, shift = 1.68, angle = 5.3 degrees |
| 13629 | | |
| 13630 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13631 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13632 | | Matrix rotation and translation |
| 13633 | | 0.76004882 -0.31216430 -0.56998179 120.52977483 |
| 13634 | | 0.64803919 0.29834738 0.70073821 136.13005086 |
| 13635 | | -0.04869288 -0.90196579 0.42905327 134.38997755 |
| 13636 | | Axis -0.82626859 -0.26874872 0.49502964 |
| 13637 | | Axis point 0.00000000 179.50760782 12.18667529 |
| 13638 | | Rotation angle (degrees) 75.89351796 |
| 13639 | | Shift along axis -69.64772182 |
| 13640 | | |
| 13641 | | Average map value = 0.07772 for 3543 atoms, 1639 outside contour |
| 13642 | | |
| 13643 | | > view matrix models |
| 13644 | | > #4,-0.79283,0.56674,-0.2241,53.148,0.38239,0.17628,-0.90703,83.992,-0.47455,-0.80482,-0.35648,181.83 |
| 13645 | | |
| 13646 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13647 | | |
| 13648 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13649 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13650 | | correlation = 0.6252, correlation about mean = 0.08248, overlap = 377.4 |
| 13651 | | steps = 92, shift = 1.79, angle = 7.82 degrees |
| 13652 | | |
| 13653 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13654 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13655 | | Matrix rotation and translation |
| 13656 | | 0.77422184 0.00860322 -0.63285584 119.94853354 |
| 13657 | | 0.59818138 0.31674030 0.73610774 135.38899189 |
| 13658 | | 0.20678385 -0.94847328 0.24008097 132.44193362 |
| 13659 | | Axis -0.85407143 -0.42569176 0.29891223 |
| 13660 | | Axis point 0.00000000 154.35374717 29.02610154 |
| 13661 | | Rotation angle (degrees) 80.47246578 |
| 13662 | | Shift along axis -120.49008048 |
| 13663 | | |
| 13664 | | Average map value = 0.08036 for 3543 atoms, 1594 outside contour |
| 13665 | | |
| 13666 | | > view matrix models |
| 13667 | | > #4,-0.85534,0.50617,0.11038,58.204,0.25637,0.5987,-0.75883,86.079,-0.45018,-0.62076,-0.64186,177.49 |
| 13668 | | |
| 13669 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13670 | | |
| 13671 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13672 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13673 | | correlation = 0.6174, correlation about mean = 0.04413, overlap = 377.2 |
| 13674 | | steps = 144, shift = 1.16, angle = 4.98 degrees |
| 13675 | | |
| 13676 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13677 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13678 | | Matrix rotation and translation |
| 13679 | | 0.61680370 0.48013225 -0.62371965 117.51906280 |
| 13680 | | 0.73315914 -0.06211477 0.67721446 136.58836850 |
| 13681 | | 0.28641030 -0.87499416 -0.39032597 122.07032601 |
| 13682 | | Axis -0.85424133 -0.50088024 0.13925063 |
| 13683 | | Axis point 0.00000000 87.55385681 47.90261525 |
| 13684 | | Rotation angle (degrees) 114.69693773 |
| 13685 | | Shift along axis -151.80568528 |
| 13686 | | |
| 13687 | | Average map value = 0.07994 for 3543 atoms, 1547 outside contour |
| 13688 | | |
| 13689 | | > view matrix models |
| 13690 | | > #4,-0.83041,0.46392,-0.30854,52.839,0.49808,0.36996,-0.78425,86.82,-0.24968,-0.80493,-0.53828,179.45 |
| 13691 | | |
| 13692 | | > view matrix models |
| 13693 | | > #4,-0.13679,0.026261,-0.99025,46.311,0.98233,-0.12531,-0.13902,99.651,-0.12774,-0.99177,-0.0086557,188.37 |
| 13694 | | |
| 13695 | | > view matrix models |
| 13696 | | > #4,-0.0858,-0.54265,-0.83557,50.664,0.97546,-0.21644,0.040397,102.61,-0.20277,-0.8116,0.5479,195.86 |
| 13697 | | |
| 13698 | | > view matrix models |
| 13699 | | > #4,-0.21582,-0.91161,-0.34985,58.728,0.92311,-0.30727,0.23119,105.6,-0.31825,-0.27306,0.90783,199.09 |
| 13700 | | |
| 13701 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13702 | | |
| 13703 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13704 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13705 | | correlation = 0.6142, correlation about mean = 0.06728, overlap = 371.6 |
| 13706 | | steps = 136, shift = 5.12, angle = 5.11 degrees |
| 13707 | | |
| 13708 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13709 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13710 | | Matrix rotation and translation |
| 13711 | | 0.96043850 0.23062480 0.15610920 127.59860215 |
| 13712 | | -0.11693305 0.84269957 -0.52553219 116.03021210 |
| 13713 | | -0.25275391 0.48648703 0.83632878 136.15470811 |
| 13714 | | Axis 0.88348114 0.35693280 -0.30341401 |
| 13715 | | Axis point 0.00000000 -274.14278555 226.20609132 |
| 13716 | | Rotation angle (degrees) 34.94188216 |
| 13717 | | Shift along axis 112.83470082 |
| 13718 | | |
| 13719 | | Average map value = 0.07938 for 3543 atoms, 1604 outside contour |
| 13720 | | |
| 13721 | | > view matrix models |
| 13722 | | > #4,-0.91644,0.020454,-0.39964,51.05,-0.084386,-0.98611,0.14304,98.477,-0.39117,0.16481,0.90544,197.06 |
| 13723 | | |
| 13724 | | > view matrix models |
| 13725 | | > #4,-0.11916,0.70911,-0.69495,46.914,-0.97667,-0.20966,-0.046466,90.226,-0.17865,0.6732,0.71755,193.25 |
| 13726 | | |
| 13727 | | > view matrix models |
| 13728 | | > #4,0.035376,0.96512,0.2594,60.833,-0.99038,-0.00088133,0.13834,92.256,0.13375,-0.2618,0.95581,200.9 |
| 13729 | | |
| 13730 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13731 | | |
| 13732 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13733 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13734 | | correlation = 0.6223, correlation about mean = 0.06382, overlap = 375 |
| 13735 | | steps = 88, shift = 2.2, angle = 15.7 degrees |
| 13736 | | |
| 13737 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13738 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13739 | | Matrix rotation and translation |
| 13740 | | -0.81876534 -0.57405063 -0.00944356 120.33245963 |
| 13741 | | 0.24010238 -0.32742301 -0.91386269 114.09647611 |
| 13742 | | 0.52151141 -0.75050652 0.40591354 137.21262895 |
| 13743 | | Axis 0.16573978 -0.53870240 0.82603272 |
| 13744 | | Axis point 22.03015853 119.08534412 0.00000000 |
| 13745 | | Rotation angle (degrees) 150.47461150 |
| 13746 | | Shift along axis 71.82194979 |
| 13747 | | |
| 13748 | | Average map value = 0.07956 for 3543 atoms, 1607 outside contour |
| 13749 | | |
| 13750 | | > ui mousemode right "translate selected models" |
| 13751 | | |
| 13752 | | > view matrix models |
| 13753 | | > #4,-0.14965,0.96339,0.22244,60.192,-0.93523,-0.21093,0.28435,95.51,0.32086,-0.16548,0.93256,202.28 |
| 13754 | | |
| 13755 | | > view matrix models |
| 13756 | | > #4,-0.14965,0.96339,0.22244,57.948,-0.93523,-0.21093,0.28435,110.03,0.32086,-0.16548,0.93256,199.18 |
| 13757 | | |
| 13758 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13759 | | |
| 13760 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13761 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13762 | | correlation = 0.6273, correlation about mean = 0.06913, overlap = 394.9 |
| 13763 | | steps = 148, shift = 8.57, angle = 15.1 degrees |
| 13764 | | |
| 13765 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13766 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13767 | | Matrix rotation and translation |
| 13768 | | -0.93216687 -0.35935780 0.04389642 127.74993015 |
| 13769 | | 0.13960902 -0.46869163 -0.87225998 111.60192145 |
| 13770 | | 0.33402731 -0.80696352 0.48706840 136.31351167 |
| 13771 | | Axis 0.11241190 -0.49947832 0.85900231 |
| 13772 | | Axis point 42.04774727 105.73248501 0.00000000 |
| 13773 | | Rotation angle (degrees) 163.11606407 |
| 13774 | | Shift along axis 75.71149448 |
| 13775 | | |
| 13776 | | Average map value = 0.0849 for 3543 atoms, 1504 outside contour |
| 13777 | | |
| 13778 | | > view matrix models |
| 13779 | | > #4,0.08841,0.989,0.11861,58.461,-0.95363,0.049646,0.29686,107.27,0.2877,-0.13936,0.94753,204.11 |
| 13780 | | |
| 13781 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13782 | | |
| 13783 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13784 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13785 | | correlation = 0.6273, correlation about mean = 0.06914, overlap = 394.9 |
| 13786 | | steps = 80, shift = 5.75, angle = 0.0356 degrees |
| 13787 | | |
| 13788 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13789 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13790 | | Matrix rotation and translation |
| 13791 | | -0.93231630 -0.35894313 0.04411512 127.75485318 |
| 13792 | | 0.13910361 -0.46853048 -0.87242728 111.60013068 |
| 13793 | | 0.33382106 -0.80724161 0.48674889 136.30956483 |
| 13794 | | Axis 0.11241763 -0.49961981 0.85891928 |
| 13795 | | Axis point 42.07192469 105.72834728 0.00000000 |
| 13796 | | Rotation angle (degrees) 163.14645059 |
| 13797 | | Shift along axis 75.68317508 |
| 13798 | | |
| 13799 | | Average map value = 0.08491 for 3543 atoms, 1502 outside contour |
| 13800 | | |
| 13801 | | > volume #1 step 1 |
| 13802 | | |
| 13803 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13804 | | |
| 13805 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13806 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13807 | | correlation = 0.6273, correlation about mean = 0.06914, overlap = 394.9 |
| 13808 | | steps = 48, shift = 0.00884, angle = 0.0507 degrees |
| 13809 | | |
| 13810 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13811 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13812 | | Matrix rotation and translation |
| 13813 | | -0.93209792 -0.35953716 0.04389178 127.75077077 |
| 13814 | | 0.13976555 -0.46881447 -0.87216889 111.59920955 |
| 13815 | | 0.33415423 -0.80681225 0.48723190 136.31643911 |
| 13816 | | Axis 0.11244562 -0.49939443 0.85904667 |
| 13817 | | Axis point 42.03780544 105.72905814 0.00000000 |
| 13818 | | Rotation angle (degrees) 163.10525545 |
| 13819 | | Shift along axis 75.73517445 |
| 13820 | | |
| 13821 | | Average map value = 0.0849 for 3543 atoms, 1548 outside contour |
| 13822 | | |
| 13823 | | > ui mousemode right "rotate selected models" |
| 13824 | | |
| 13825 | | > ui mousemode right translate |
| 13826 | | |
| 13827 | | > ui mousemode right "translate selected models" |
| 13828 | | |
| 13829 | | > view matrix models |
| 13830 | | > #4,0.088203,0.98904,0.11845,60.8,-0.95366,0.049506,0.29678,103.34,0.28766,-0.13913,0.94757,200.92 |
| 13831 | | |
| 13832 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13833 | | |
| 13834 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13835 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13836 | | correlation = 0.6273, correlation about mean = 0.06916, overlap = 394.9 |
| 13837 | | steps = 88, shift = 2.67, angle = 0.0366 degrees |
| 13838 | | |
| 13839 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13840 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13841 | | Matrix rotation and translation |
| 13842 | | -0.93221811 -0.35929023 0.04335794 127.74014219 |
| 13843 | | 0.14000398 -0.46852061 -0.87228855 111.60317283 |
| 13844 | | 0.33371884 -0.80709291 0.48706546 136.30369883 |
| 13845 | | Axis 0.11216404 -0.49954337 0.85899688 |
| 13846 | | Axis point 42.05570335 105.74412560 0.00000000 |
| 13847 | | Rotation angle (degrees) 163.10454353 |
| 13848 | | Shift along axis 75.66167739 |
| 13849 | | |
| 13850 | | Average map value = 0.0849 for 3543 atoms, 1551 outside contour |
| 13851 | | |
| 13852 | | > view matrix models |
| 13853 | | > #4,0.088432,0.98896,0.11886,57.717,-0.95377,0.049662,0.2964,104.16,0.28722,-0.13958,0.94764,206.53 |
| 13854 | | |
| 13855 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13856 | | |
| 13857 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13858 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13859 | | correlation = 0.6273, correlation about mean = 0.06914, overlap = 394.9 |
| 13860 | | steps = 108, shift = 4.93, angle = 0.0214 degrees |
| 13861 | | |
| 13862 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13863 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13864 | | Matrix rotation and translation |
| 13865 | | -0.93213132 -0.35948197 0.04363376 127.74327496 |
| 13866 | | 0.13992110 -0.46868236 -0.87221495 111.60417408 |
| 13867 | | 0.33399592 -0.80691360 0.48717262 136.31357697 |
| 13868 | | Axis 0.11232542 -0.49945445 0.85902750 |
| 13869 | | Axis point 42.04077203 105.73942514 0.00000000 |
| 13870 | | Rotation angle (degrees) 163.10136941 |
| 13871 | | Shift along axis 75.70472756 |
| 13872 | | |
| 13873 | | Average map value = 0.0849 for 3543 atoms, 1551 outside contour |
| 13874 | | |
| 13875 | | > view matrix models |
| 13876 | | > #4,0.088244,0.98901,0.11863,59.052,-0.95372,0.049521,0.29659,99.112,0.28745,-0.13931,0.94761,200.95 |
| 13877 | | |
| 13878 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13879 | | |
| 13880 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13881 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13882 | | correlation = 0.6273, correlation about mean = 0.06913, overlap = 394.9 |
| 13883 | | steps = 104, shift = 3.1, angle = 0.0158 degrees |
| 13884 | | |
| 13885 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13886 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13887 | | Matrix rotation and translation |
| 13888 | | -0.93219362 -0.35931028 0.04371696 127.74342024 |
| 13889 | | 0.13970708 -0.46858766 -0.87230013 111.60546681 |
| 13890 | | 0.33391164 -0.80704505 0.48701262 136.31195029 |
| 13891 | | Axis 0.11232701 -0.49952738 0.85898489 |
| 13892 | | Axis point 42.04959238 105.74023051 0.00000000 |
| 13893 | | Rotation angle (degrees) 163.11394954 |
| 13894 | | Shift along axis 75.68895493 |
| 13895 | | |
| 13896 | | Average map value = 0.0849 for 3543 atoms, 1551 outside contour |
| 13897 | | |
| 13898 | | > view matrix models |
| 13899 | | > #4,0.088449,0.98898,0.11875,58.693,-0.95367,0.049662,0.29673,104.12,0.28756,-0.13949,0.94755,204.9 |
| 13900 | | |
| 13901 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13902 | | |
| 13903 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13904 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13905 | | correlation = 0.6273, correlation about mean = 0.06916, overlap = 394.9 |
| 13906 | | steps = 100, shift = 3.4, angle = 0.00729 degrees |
| 13907 | | |
| 13908 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13909 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13910 | | Matrix rotation and translation |
| 13911 | | -0.93222138 -0.35925150 0.04360794 127.74575065 |
| 13912 | | 0.13976346 -0.46855755 -0.87230728 111.59954447 |
| 13913 | | 0.33381053 -0.80708870 0.48700959 136.30451433 |
| 13914 | | Axis 0.11226460 -0.49954292 0.85898401 |
| 13915 | | Axis point 42.05719538 105.73708502 0.00000000 |
| 13916 | | Rotation angle (degrees) 163.11401569 |
| 13917 | | Shift along axis 75.67596242 |
| 13918 | | |
| 13919 | | Average map value = 0.0849 for 3543 atoms, 1551 outside contour |
| 13920 | | |
| 13921 | | > view matrix models |
| 13922 | | > #4,0.088502,0.98897,0.1188,59.767,-0.9537,0.049711,0.29664,104.9,0.28746,-0.13956,0.94757,203.68 |
| 13923 | | |
| 13924 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13925 | | |
| 13926 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13927 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13928 | | correlation = 0.6273, correlation about mean = 0.06911, overlap = 394.9 |
| 13929 | | steps = 76, shift = 3.37, angle = 0.0143 degrees |
| 13930 | | |
| 13931 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13932 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13933 | | Matrix rotation and translation |
| 13934 | | -0.93222443 -0.35927307 0.04336425 127.73907909 |
| 13935 | | 0.13998592 -0.46851465 -0.87229465 111.60923341 |
| 13936 | | 0.33370876 -0.80710400 0.48705398 136.30160902 |
| 13937 | | Axis 0.11216296 -0.49954869 0.85899393 |
| 13938 | | Axis point 42.05592760 105.74639324 0.00000000 |
| 13939 | | Rotation angle (degrees) 163.10571085 |
| 13940 | | Shift along axis 75.65560204 |
| 13941 | | |
| 13942 | | Average map value = 0.0849 for 3543 atoms, 1552 outside contour |
| 13943 | | |
| 13944 | | > ui mousemode right translate |
| 13945 | | |
| 13946 | | > ui mousemode right "translate selected models" |
| 13947 | | |
| 13948 | | > view matrix models |
| 13949 | | > #4,0.088452,0.98896,0.11887,59.068,-0.95377,0.049677,0.29641,102.14,0.28723,-0.13959,0.94764,201.99 |
| 13950 | | |
| 13951 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13952 | | |
| 13953 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13954 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13955 | | correlation = 0.6273, correlation about mean = 0.06914, overlap = 394.9 |
| 13956 | | steps = 80, shift = 0.595, angle = 0.0181 degrees |
| 13957 | | |
| 13958 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13959 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13960 | | Matrix rotation and translation |
| 13961 | | -0.93222386 -0.35923658 0.04367773 127.75020326 |
| 13962 | | 0.13970829 -0.46860244 -0.87229200 111.60004529 |
| 13963 | | 0.33382669 -0.80706928 0.48703071 136.30304825 |
| 13964 | | Axis 0.11228846 -0.49952500 0.85899132 |
| 13965 | | Axis point 42.05967602 105.73363882 0.00000000 |
| 13966 | | Rotation angle (degrees) 163.11660611 |
| 13967 | | Shift along axis 75.68099614 |
| 13968 | | |
| 13969 | | Average map value = 0.0849 for 3543 atoms, 1553 outside contour |
| 13970 | | |
| 13971 | | > ui mousemode right "rotate selected models" |
| 13972 | | |
| 13973 | | > view matrix models |
| 13974 | | > #4,-0.28904,0.94549,0.14999,58.64,-0.90323,-0.32126,0.28456,103.02,0.31724,-0.053231,0.94685,202.26 |
| 13975 | | |
| 13976 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 13977 | | |
| 13978 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 13979 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 13980 | | correlation = 0.633, correlation about mean = 0.07098, overlap = 391.7 |
| 13981 | | steps = 120, shift = 6.89, angle = 12.5 degrees |
| 13982 | | |
| 13983 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 13984 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 13985 | | Matrix rotation and translation |
| 13986 | | -0.69565278 -0.68959162 0.20132211 126.42166267 |
| 13987 | | 0.27735831 -0.51633712 -0.81022734 116.94310098 |
| 13988 | | 0.66267606 -0.50779854 0.55045532 137.59923295 |
| 13989 | | Axis 0.27166546 -0.41442460 0.86859089 |
| 13990 | | Axis point 13.58099337 108.41211780 0.00000000 |
| 13991 | | Rotation angle (degrees) 146.17763842 |
| 13992 | | Shift along axis 105.39773984 |
| 13993 | | |
| 13994 | | Average map value = 0.08244 for 3543 atoms, 1604 outside contour |
| 13995 | | |
| 13996 | | > view matrix models |
| 13997 | | > #4,0.4645,0.77824,0.4226,65.755,-0.86899,0.30863,0.38679,96.046,0.17059,-0.5469,0.81963,199.93 |
| 13998 | | |
| 13999 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14000 | | |
| 14001 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14002 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14003 | | correlation = 0.6205, correlation about mean = 0.06228, overlap = 365.7 |
| 14004 | | steps = 92, shift = 5.51, angle = 4.01 degrees |
| 14005 | | |
| 14006 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14007 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14008 | | Matrix rotation and translation |
| 14009 | | -0.99468894 0.08836034 0.05278587 122.51377915 |
| 14010 | | -0.06530326 -0.14537290 -0.98721942 108.23184920 |
| 14011 | | -0.07955741 -0.98542334 0.15037103 127.12608801 |
| 14012 | | Axis 0.00885615 0.65255939 -0.75768583 |
| 14013 | | Axis point 66.16912866 104.74280851 0.00000000 |
| 14014 | | Rotation angle (degrees) 174.18001851 |
| 14015 | | Shift along axis -24.60892644 |
| 14016 | | |
| 14017 | | Average map value = 0.07725 for 3543 atoms, 1678 outside contour |
| 14018 | | |
| 14019 | | > view matrix models |
| 14020 | | > #4,-0.4486,-0.41665,0.79067,76.184,-0.42909,-0.67565,-0.59949,89.925,0.78399,-0.6082,0.12431,191.6 |
| 14021 | | |
| 14022 | | > view matrix models |
| 14023 | | > #4,0.26336,-0.15386,-0.95235,51.535,0.063011,0.98783,-0.14217,92.848,0.96264,-0.022567,0.26985,192.42 |
| 14024 | | |
| 14025 | | > view matrix models |
| 14026 | | > #4,-0.20808,-0.46867,-0.85852,52.467,0.016406,0.87593,-0.48215,87.985,0.97797,-0.11441,-0.17458,186.13 |
| 14027 | | |
| 14028 | | > view matrix models |
| 14029 | | > #4,0.367,-0.77308,0.51735,75.884,-0.50278,-0.63278,-0.5889,89.706,0.78264,-0.043985,-0.62092,178.6 |
| 14030 | | |
| 14031 | | > view matrix models |
| 14032 | | > #4,0.60234,0.39649,0.69281,75.401,0.10072,-0.89873,0.42677,107.7,0.79186,-0.18728,-0.58127,179.69 |
| 14033 | | |
| 14034 | | > view matrix models |
| 14035 | | > #4,0.32825,0.91287,0.24274,66.091,0.34217,-0.35444,0.87022,113.31,0.88044,-0.2026,-0.4287,182.31 |
| 14036 | | |
| 14037 | | > view matrix models |
| 14038 | | > #4,0.12949,0.94889,-0.28782,57.403,0.43725,0.20588,0.87546,111.84,0.88997,-0.23921,-0.38824,183.06 |
| 14039 | | |
| 14040 | | > view matrix models |
| 14041 | | > #4,-0.31276,0.25937,-0.91373,48.905,0.16189,0.96247,0.21779,98.631,0.93593,-0.079814,-0.34301,183.36 |
| 14042 | | |
| 14043 | | > view matrix models |
| 14044 | | > #4,-0.1948,-0.82059,-0.53729,58.474,-0.263,0.57143,-0.77737,83.682,0.94493,-0.010125,-0.32713,183.4 |
| 14045 | | |
| 14046 | | > view matrix models |
| 14047 | | > #4,0.06238,-0.99089,-0.11933,66.108,-0.34609,0.090665,-0.93381,82.663,0.93613,0.099548,-0.33728,182.85 |
| 14048 | | |
| 14049 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14050 | | |
| 14051 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14052 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14053 | | correlation = 0.63, correlation about mean = 0.0667, overlap = 386.2 |
| 14054 | | steps = 192, shift = 8.15, angle = 22.8 degrees |
| 14055 | | |
| 14056 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14057 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14058 | | Matrix rotation and translation |
| 14059 | | -0.57625719 0.53129678 -0.62100835 111.18458493 |
| 14060 | | -0.70095454 0.06940490 0.70982088 138.35591835 |
| 14061 | | 0.42022657 0.84433801 0.33241982 127.42853044 |
| 14062 | | Axis 0.08309373 -0.64319014 -0.76118452 |
| 14063 | | Axis point 70.81294619 -26.82444315 0.00000000 |
| 14064 | | Rotation angle (degrees) 125.95971170 |
| 14065 | | Shift along axis -176.74704564 |
| 14066 | | |
| 14067 | | Average map value = 0.08176 for 3543 atoms, 1579 outside contour |
| 14068 | | |
| 14069 | | > ui mousemode right "translate selected models" |
| 14070 | | |
| 14071 | | > view matrix models |
| 14072 | | > #4,0.33939,-0.86848,-0.36133,57.71,-0.30828,0.26021,-0.91501,81.211,0.88869,0.42194,-0.17942,183.22 |
| 14073 | | |
| 14074 | | > view matrix models |
| 14075 | | > #4,0.33939,-0.86848,-0.36133,57.804,-0.30828,0.26021,-0.91501,79.912,0.88869,0.42194,-0.17942,182.14 |
| 14076 | | |
| 14077 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14078 | | |
| 14079 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14080 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14081 | | correlation = 0.6341, correlation about mean = 0.08868, overlap = 390.6 |
| 14082 | | steps = 84, shift = 3.36, angle = 5.72 degrees |
| 14083 | | |
| 14084 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14085 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14086 | | Matrix rotation and translation |
| 14087 | | -0.52249565 0.61024765 -0.59547971 111.87666854 |
| 14088 | | -0.71531028 0.06636349 0.69564868 138.49284741 |
| 14089 | | 0.46403608 0.78942617 0.40184178 131.58744922 |
| 14090 | | Axis 0.05517782 -0.62340944 -0.77994620 |
| 14091 | | Axis point 69.34555669 -26.84915304 0.00000000 |
| 14092 | | Rotation angle (degrees) 121.81276907 |
| 14093 | | Shift along axis -182.79576837 |
| 14094 | | |
| 14095 | | Average map value = 0.08295 for 3543 atoms, 1554 outside contour |
| 14096 | | |
| 14097 | | > show sel surfaces |
| 14098 | | |
| 14099 | | > view matrix models |
| 14100 | | > #4,0.29296,-0.86192,-0.41385,51.488,-0.26416,0.34303,-0.90141,88.288,0.91891,0.3734,-0.1272,180.03 |
| 14101 | | |
| 14102 | | > view matrix models |
| 14103 | | > #4,0.29296,-0.86192,-0.41385,48.809,-0.26416,0.34303,-0.90141,93.956,0.91891,0.3734,-0.1272,173.25 |
| 14104 | | |
| 14105 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14106 | | |
| 14107 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14108 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14109 | | correlation = 0.5583, correlation about mean = 0.05998, overlap = 367.8 |
| 14110 | | steps = 72, shift = 2.07, angle = 8.47 degrees |
| 14111 | | |
| 14112 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14113 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14114 | | Matrix rotation and translation |
| 14115 | | -0.42432254 0.62863580 -0.65174182 131.28282401 |
| 14116 | | -0.80824479 0.06158539 0.58561727 139.72513163 |
| 14117 | | 0.40827776 0.77525755 0.48195954 128.45698840 |
| 14118 | | Axis 0.10561303 -0.59033812 -0.80021672 |
| 14119 | | Axis point 89.12560602 -35.70063158 0.00000000 |
| 14120 | | Rotation angle (degrees) 116.12869112 |
| 14121 | | Shift along axis -171.41332328 |
| 14122 | | |
| 14123 | | Average map value = 0.07919 for 3543 atoms, 1665 outside contour |
| 14124 | | |
| 14125 | | > view matrix models |
| 14126 | | > #4,0.34166,-0.85715,-0.38543,59.488,-0.12683,0.36431,-0.9226,96.537,0.93122,0.36411,0.015754,181.24 |
| 14127 | | |
| 14128 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14129 | | |
| 14130 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14131 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14132 | | correlation = 0.6369, correlation about mean = 0.08286, overlap = 396.2 |
| 14133 | | steps = 148, shift = 18, angle = 20.8 degrees |
| 14134 | | |
| 14135 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14136 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14137 | | Matrix rotation and translation |
| 14138 | | -0.53863683 0.76332811 -0.35665188 114.41676576 |
| 14139 | | -0.61110456 -0.06253954 0.78907542 137.12424074 |
| 14140 | | 0.58001860 0.64297667 0.50015939 131.38522142 |
| 14141 | | Axis -0.08750214 -0.56099504 -0.82318160 |
| 14142 | | Axis point 59.27744054 -8.04290796 0.00000000 |
| 14143 | | Rotation angle (degrees) 123.40190453 |
| 14144 | | Shift along axis -195.09162688 |
| 14145 | | |
| 14146 | | Average map value = 0.08383 for 3543 atoms, 1567 outside contour |
| 14147 | | |
| 14148 | | > view matrix models |
| 14149 | | > #4,0.1597,-0.75255,-0.63887,55.77,-0.34654,0.56326,-0.7501,84.956,0.92434,0.34119,-0.17083,184.75 |
| 14150 | | |
| 14151 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14152 | | |
| 14153 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14154 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14155 | | correlation = 0.6349, correlation about mean = 0.08212, overlap = 396.7 |
| 14156 | | steps = 80, shift = 3.34, angle = 5.39 degrees |
| 14157 | | |
| 14158 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14159 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14160 | | Matrix rotation and translation |
| 14161 | | -0.56272562 0.78039169 -0.27263288 116.94261180 |
| 14162 | | -0.58502433 -0.14295467 0.79831728 136.61314281 |
| 14163 | | 0.58402603 0.60873046 0.53699238 130.92101249 |
| 14164 | | Axis -0.11681171 -0.52782038 -0.84128513 |
| 14165 | | Axis point 59.49131241 -1.39610127 0.00000000 |
| 14166 | | Rotation angle (degrees) 125.75665679 |
| 14167 | | Shift along axis -195.90936847 |
| 14168 | | |
| 14169 | | Average map value = 0.08293 for 3543 atoms, 1589 outside contour |
| 14170 | | |
| 14171 | | > ui mousemode right "rotate selected models" |
| 14172 | | |
| 14173 | | > view matrix models |
| 14174 | | > #4,0.52454,0.30219,-0.79595,50.5,-0.54966,0.83415,-0.045534,92.078,0.65018,0.46138,0.60365,193.97 |
| 14175 | | |
| 14176 | | > view matrix models |
| 14177 | | > #4,0.25861,0.96026,0.105,59.867,-0.89275,0.19607,0.40566,99.745,0.36895,-0.19864,0.90797,200.25 |
| 14178 | | |
| 14179 | | > view matrix models |
| 14180 | | > #4,0.066754,0.82056,0.56765,66.713,-0.91716,-0.17356,0.35874,100.12,0.39289,-0.54457,0.741,198.89 |
| 14181 | | |
| 14182 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14183 | | |
| 14184 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14185 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14186 | | correlation = 0.6279, correlation about mean = 0.08513, overlap = 401.9 |
| 14187 | | steps = 64, shift = 1.08, angle = 3.03 degrees |
| 14188 | | |
| 14189 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14190 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14191 | | Matrix rotation and translation |
| 14192 | | -0.91802469 -0.39625568 -0.01456341 124.92492342 |
| 14193 | | 0.01094544 0.01139014 -0.99987522 110.90591696 |
| 14194 | | 0.39637212 -0.91806955 -0.00611924 129.33232769 |
| 14195 | | Axis 0.14001317 -0.70333001 0.69693845 |
| 14196 | | Axis point 61.96395682 0.00000000 132.43635661 |
| 14197 | | Rotation angle (degrees) 163.01414295 |
| 14198 | | Shift along axis 29.62434600 |
| 14199 | | |
| 14200 | | Average map value = 0.08526 for 3543 atoms, 1546 outside contour |
| 14201 | | |
| 14202 | | > view matrix models |
| 14203 | | > #4,-0.57153,0.28847,0.76821,68.498,-0.51049,-0.85795,-0.057626,97.542,0.64246,-0.4251,0.6376,197.8 |
| 14204 | | |
| 14205 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14206 | | |
| 14207 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14208 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14209 | | correlation = 0.623, correlation about mean = 0.06978, overlap = 378.1 |
| 14210 | | steps = 72, shift = 3.47, angle = 3.19 degrees |
| 14211 | | |
| 14212 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14213 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14214 | | Matrix rotation and translation |
| 14215 | | -0.36233568 -0.78299981 -0.50559286 119.09406999 |
| 14216 | | 0.05429527 0.52380064 -0.85010876 108.52150018 |
| 14217 | | 0.93046487 -0.33547604 -0.14727848 127.45255956 |
| 14218 | | Axis 0.29573801 -0.82524262 0.48115865 |
| 14219 | | Axis point 35.17425630 -0.00000000 136.68709500 |
| 14220 | | Rotation angle (degrees) 119.53181444 |
| 14221 | | Shift along axis 6.98897656 |
| 14222 | | |
| 14223 | | Average map value = 0.08033 for 3543 atoms, 1617 outside contour |
| 14224 | | |
| 14225 | | > view matrix models |
| 14226 | | > #4,0.42435,-0.67917,0.59888,74.468,0.22034,-0.56405,-0.7958,87.027,0.87828,0.46965,-0.089706,188.36 |
| 14227 | | |
| 14228 | | > view matrix models |
| 14229 | | > #4,0.98546,-0.053618,-0.1612,62.965,-0.16802,-0.1676,-0.97143,81.315,0.02507,0.9844,-0.17417,181.67 |
| 14230 | | |
| 14231 | | > view matrix models |
| 14232 | | > #4,0.74768,0.36474,-0.55493,55.093,-0.54679,-0.13604,-0.82614,82.486,-0.37682,0.92112,0.097718,185.01 |
| 14233 | | |
| 14234 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14235 | | |
| 14236 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14237 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14238 | | correlation = 0.6023, correlation about mean = 0.04653, overlap = 362.9 |
| 14239 | | steps = 92, shift = 3.39, angle = 8.08 degrees |
| 14240 | | |
| 14241 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14242 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14243 | | Matrix rotation and translation |
| 14244 | | -0.66699714 -0.40831582 -0.62321184 115.67116554 |
| 14245 | | 0.02728273 -0.84928251 0.52723321 135.57419424 |
| 14246 | | -0.74456058 0.33466013 0.57760898 128.51718507 |
| 14247 | | Axis -0.39182006 0.24690299 0.88629338 |
| 14248 | | Axis point 78.47343721 60.84381295 0.00000000 |
| 14249 | | Rotation angle (degrees) 165.77432779 |
| 14250 | | Shift along axis 102.05532192 |
| 14251 | | |
| 14252 | | Average map value = 0.07501 for 3543 atoms, 1711 outside contour |
| 14253 | | |
| 14254 | | > view matrix models |
| 14255 | | > #4,0.31145,0.92865,0.20153,62.03,0.20495,0.14145,-0.9685,83.717,-0.9279,0.34294,-0.14627,178.11 |
| 14256 | | |
| 14257 | | > view matrix models |
| 14258 | | > #4,-0.47172,0.8713,0.13536,58.619,0.41832,0.35628,-0.83551,85.791,-0.7762,-0.33751,-0.53255,175.04 |
| 14259 | | |
| 14260 | | > view matrix models |
| 14261 | | > #4,-0.9797,-0.00216,-0.20047,54.682,0.11672,0.80687,-0.57908,86.298,0.16301,-0.59072,-0.79024,176.85 |
| 14262 | | |
| 14263 | | > view matrix models |
| 14264 | | > #4,-0.26037,-0.72593,-0.63658,51.284,-0.4907,0.66731,-0.56027,85.38,0.83152,0.1665,-0.52996,181.06 |
| 14265 | | |
| 14266 | | > view matrix models |
| 14267 | | > #4,0.39876,-0.46019,-0.79323,49.865,-0.62912,0.49207,-0.60173,84.968,0.66723,0.73898,-0.093301,185.21 |
| 14268 | | |
| 14269 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14270 | | |
| 14271 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14272 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14273 | | correlation = 0.6232, correlation about mean = 0.06098, overlap = 375.4 |
| 14274 | | steps = 68, shift = 3.61, angle = 9.41 degrees |
| 14275 | | |
| 14276 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14277 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14278 | | Matrix rotation and translation |
| 14279 | | -0.83407929 0.50434261 -0.22349555 116.89456566 |
| 14280 | | -0.43000913 -0.34063687 0.83609728 134.70137225 |
| 14281 | | 0.34554866 0.79347656 0.50099009 131.65071068 |
| 14282 | | Axis -0.03892927 -0.51975831 -0.85342593 |
| 14283 | | Axis point 62.00079351 8.12214675 0.00000000 |
| 14284 | | Rotation angle (degrees) 146.81033208 |
| 14285 | | Shift along axis -186.91690718 |
| 14286 | | |
| 14287 | | Average map value = 0.0795 for 3543 atoms, 1631 outside contour |
| 14288 | | |
| 14289 | | > ui mousemode right "translate selected models" |
| 14290 | | |
| 14291 | | > view matrix models |
| 14292 | | > #4,0.35373,-0.59324,-0.72315,52.075,-0.63279,0.41758,-0.65208,86.906,0.68881,0.68826,-0.22769,177.83 |
| 14293 | | |
| 14294 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14295 | | |
| 14296 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14297 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14298 | | correlation = 0.6419, correlation about mean = 0.08137, overlap = 402.8 |
| 14299 | | steps = 96, shift = 4.85, angle = 15.1 degrees |
| 14300 | | |
| 14301 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14302 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14303 | | Matrix rotation and translation |
| 14304 | | -0.69093325 0.58309004 -0.42733738 115.06658111 |
| 14305 | | -0.61975800 -0.17344293 0.76538720 136.69783579 |
| 14306 | | 0.37217101 0.79367723 0.48121221 130.39839536 |
| 14307 | | Axis 0.01958335 -0.55344776 -0.83265363 |
| 14308 | | Axis point 68.29281455 -5.40523249 0.00000000 |
| 14309 | | Rotation angle (degrees) 133.75546775 |
| 14310 | | Shift along axis -181.97841940 |
| 14311 | | |
| 14312 | | Average map value = 0.08517 for 3543 atoms, 1530 outside contour |
| 14313 | | |
| 14314 | | > view matrix models |
| 14315 | | > #4,0.37812,-0.72018,-0.58169,53.623,-0.43311,0.41771,-0.7987,88.289,0.81819,0.55394,-0.15397,176.79 |
| 14316 | | |
| 14317 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14318 | | |
| 14319 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14320 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14321 | | correlation = 0.6419, correlation about mean = 0.08134, overlap = 402.8 |
| 14322 | | steps = 132, shift = 9.11, angle = 0.0115 degrees |
| 14323 | | |
| 14324 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14325 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14326 | | Matrix rotation and translation |
| 14327 | | -0.69102227 0.58296695 -0.42736138 115.06164151 |
| 14328 | | -0.61976552 -0.17357862 0.76535034 136.69744729 |
| 14329 | | 0.37199316 0.79373798 0.48124951 130.39744326 |
| 14330 | | Axis 0.01965336 -0.55341001 -0.83267707 |
| 14331 | | Axis point 68.29708750 -5.39655880 0.00000000 |
| 14332 | | Rotation angle (degrees) 133.76290116 |
| 14333 | | Shift along axis -181.96734903 |
| 14334 | | |
| 14335 | | Average map value = 0.08516 for 3543 atoms, 1534 outside contour |
| 14336 | | |
| 14337 | | > ui mousemode right translate |
| 14338 | | |
| 14339 | | > select add #1 |
| 14340 | | |
| 14341 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 14342 | | |
| 14343 | | > ui mousemode right "translate selected models" |
| 14344 | | |
| 14345 | | > view matrix models |
| 14346 | | > #1,-0.43261,-0.55465,-0.71078,272.8,0.88413,-0.41534,-0.21401,62.802,-0.17652,-0.72101,0.67007,213.62,#4,0.37829,-0.7201,-0.58169,54.522,-0.43315,0.41765,-0.79872,79.849,0.81809,0.5541,-0.15392,182.13 |
| 14347 | | |
| 14348 | | > view matrix models |
| 14349 | | > #1,-0.43261,-0.55465,-0.71078,272.41,0.88413,-0.41534,-0.21401,62.128,-0.17652,-0.72101,0.67007,212.96,#4,0.37829,-0.7201,-0.58169,54.13,-0.43315,0.41765,-0.79872,79.175,0.81809,0.5541,-0.15392,181.47 |
| 14350 | | |
| 14351 | | > select subtract #4 |
| 14352 | | |
| 14353 | | 5 models selected |
| 14354 | | |
| 14355 | | > view matrix models |
| 14356 | | > #1,-0.43261,-0.55465,-0.71078,274.08,0.88413,-0.41534,-0.21401,54.924,-0.17652,-0.72101,0.67007,219.63 |
| 14357 | | |
| 14358 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14359 | | |
| 14360 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14361 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14362 | | correlation = 0.6043, correlation about mean = 0.04674, overlap = 377.4 |
| 14363 | | steps = 92, shift = 4.27, angle = 8.11 degrees |
| 14364 | | |
| 14365 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14366 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14367 | | Matrix rotation and translation |
| 14368 | | -0.65248285 0.53861104 -0.53307060 121.07732590 |
| 14369 | | -0.65957647 -0.05728005 0.74945171 135.57240515 |
| 14370 | | 0.37312865 0.84060522 0.39262942 121.33577205 |
| 14371 | | Axis 0.06056532 -0.60210789 -0.79611427 |
| 14372 | | Axis point 74.46539734 -15.54876958 0.00000000 |
| 14373 | | Rotation angle (degrees) 131.19065565 |
| 14374 | | Shift along axis -170.89326731 |
| 14375 | | |
| 14376 | | Average map value = 0.07915 for 3543 atoms, 1606 outside contour |
| 14377 | | |
| 14378 | | > view matrix models |
| 14379 | | > #1,-0.43261,-0.55465,-0.71078,274.18,0.88413,-0.41534,-0.21401,54.007,-0.17652,-0.72101,0.67007,220.24 |
| 14380 | | |
| 14381 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14382 | | |
| 14383 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14384 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14385 | | correlation = 0.6043, correlation about mean = 0.04672, overlap = 377.4 |
| 14386 | | steps = 72, shift = 1.11, angle = 0.0237 degrees |
| 14387 | | |
| 14388 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14389 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14390 | | Matrix rotation and translation |
| 14391 | | -0.65262798 0.53861257 -0.53289137 121.07368372 |
| 14392 | | -0.65955428 -0.05769205 0.74943964 135.58537131 |
| 14393 | | 0.37291401 0.84057606 0.39289567 121.34084800 |
| 14394 | | Axis 0.06056422 -0.60194802 -0.79623524 |
| 14395 | | Axis point 74.46976104 -15.50874417 0.00000000 |
| 14396 | | Rotation angle (degrees) 131.20173043 |
| 14397 | | Shift along axis -170.89847218 |
| 14398 | | |
| 14399 | | Average map value = 0.07914 for 3543 atoms, 1609 outside contour |
| 14400 | | |
| 14401 | | > ui mousemode right "rotate selected models" |
| 14402 | | |
| 14403 | | > view matrix models |
| 14404 | | > #1,0.41044,-0.25417,0.87575,-19.653,0.071616,-0.94842,-0.30883,216.83,0.90907,0.18947,-0.37106,100.7 |
| 14405 | | |
| 14406 | | > view matrix models |
| 14407 | | > #1,0.94437,0.28794,-0.1589,-35.19,0.32502,-0.89089,0.31729,116.79,-0.050208,-0.35129,-0.93492,329.58 |
| 14408 | | |
| 14409 | | > view matrix models |
| 14410 | | > #1,-0.39008,-0.49298,-0.77769,269.36,0.91901,-0.26086,-0.2956,41.522,-0.057139,-0.83001,0.55481,229.83 |
| 14411 | | |
| 14412 | | > view matrix models |
| 14413 | | > #1,-0.82105,0.2466,-0.51485,212.89,0.37394,-0.44912,-0.81146,178.67,-0.43133,-0.85877,0.27654,305.34 |
| 14414 | | |
| 14415 | | > view matrix models |
| 14416 | | > #1,-0.83084,0.24921,-0.49759,211.99,0.33937,-0.48174,-0.80793,185.9,-0.44106,-0.84013,0.31567,300.45 |
| 14417 | | |
| 14418 | | > ui mousemode right "translate selected models" |
| 14419 | | |
| 14420 | | > view matrix models |
| 14421 | | > #1,-0.83084,0.24921,-0.49759,221.18,0.33937,-0.48174,-0.80793,203.84,-0.44106,-0.84013,0.31567,315.15 |
| 14422 | | |
| 14423 | | > view matrix models |
| 14424 | | > #1,-0.83084,0.24921,-0.49759,222.55,0.33937,-0.48174,-0.80793,201.67,-0.44106,-0.84013,0.31567,319.2 |
| 14425 | | |
| 14426 | | > view matrix models |
| 14427 | | > #1,-0.83084,0.24921,-0.49759,220.99,0.33937,-0.48174,-0.80793,202.51,-0.44106,-0.84013,0.31567,315.2 |
| 14428 | | |
| 14429 | | > ui mousemode right "rotate selected models" |
| 14430 | | |
| 14431 | | > view matrix models |
| 14432 | | > #1,-0.8276,0.22093,-0.51602,225.56,0.36182,-0.49285,-0.79131,199.38,-0.42915,-0.8416,0.32794,312.71 |
| 14433 | | |
| 14434 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14435 | | |
| 14436 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14437 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14438 | | correlation = 0.6037, correlation about mean = 0.0518, overlap = 363.7 |
| 14439 | | steps = 184, shift = 18.9, angle = 10.8 degrees |
| 14440 | | |
| 14441 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14442 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14443 | | Matrix rotation and translation |
| 14444 | | -0.71155707 0.69812703 0.07940514 130.21534644 |
| 14445 | | -0.57415932 -0.64287176 0.50700785 132.10846001 |
| 14446 | | 0.40500321 0.31517382 0.85827609 131.51873932 |
| 14447 | | Axis -0.14453766 -0.24532238 -0.95860617 |
| 14448 | | Axis point 72.73840273 28.51602827 0.00000000 |
| 14449 | | Rotation angle (degrees) 138.42402119 |
| 14450 | | Shift along axis -177.30485847 |
| 14451 | | |
| 14452 | | Average map value = 0.07697 for 3543 atoms, 1648 outside contour |
| 14453 | | |
| 14454 | | > view matrix models |
| 14455 | | > #1,-0.79616,0.15965,-0.58364,235.43,0.45374,-0.4806,-0.75043,183.08,-0.40031,-0.86228,0.3102,313.38 |
| 14456 | | |
| 14457 | | > ui mousemode right "move picked models" |
| 14458 | | |
| 14459 | | > view matrix models |
| 14460 | | > #1,-0.79616,0.15965,-0.58364,235.77,0.45374,-0.4806,-0.75043,182.18,-0.40031,-0.86228,0.3102,313.53 |
| 14461 | | |
| 14462 | | > ui mousemode right translate |
| 14463 | | |
| 14464 | | > ui mousemode right "rotate selected models" |
| 14465 | | |
| 14466 | | > view matrix models |
| 14467 | | > #1,-0.791,-0.59982,-0.12058,270.08,-0.39242,0.6486,-0.65217,149.05,0.46939,-0.46855,-0.74842,277.12 |
| 14468 | | |
| 14469 | | > view matrix models |
| 14470 | | > #1,-0.44455,-0.6994,-0.55966,285.15,-0.83661,0.54744,-0.01959,147.41,0.32008,0.45951,-0.82849,202.26 |
| 14471 | | |
| 14472 | | > view matrix models |
| 14473 | | > #1,-0.78809,-0.088385,-0.60918,264.31,-0.089547,0.99557,-0.028599,12.098,0.60901,0.032012,-0.79252,211 |
| 14474 | | |
| 14475 | | > view matrix models |
| 14476 | | > #1,-0.3182,-0.9313,0.17729,220.04,-0.94483,0.32687,0.021268,179.83,-0.077756,-0.16074,-0.98393,332.07 |
| 14477 | | |
| 14478 | | > view matrix models |
| 14479 | | > #1,-0.68791,0.3203,-0.6513,212.58,-0.31219,0.67952,0.66392,1.6146,0.65522,0.66004,-0.36746,94.025 |
| 14480 | | |
| 14481 | | > view matrix models |
| 14482 | | > #1,-0.57186,-0.46821,-0.67361,286.69,-0.68429,0.72515,0.076892,100.4,0.45247,0.50492,-0.73507,172.25 |
| 14483 | | |
| 14484 | | > view matrix models |
| 14485 | | > #1,0.76485,-0.29692,-0.5717,100.84,-0.42049,-0.90243,-0.093861,263.3,-0.48805,0.31218,-0.81508,311.69 |
| 14486 | | |
| 14487 | | > view matrix models |
| 14488 | | > #1,0.64053,-0.70366,-0.30755,132.48,-0.76695,-0.60644,-0.2098,283.75,-0.038883,0.37026,-0.92811,264.25 |
| 14489 | | |
| 14490 | | > ui mousemode right "translate selected models" |
| 14491 | | |
| 14492 | | > view matrix models |
| 14493 | | > #1,0.64053,-0.70366,-0.30755,122.92,-0.76695,-0.60644,-0.2098,297.88,-0.038883,0.37026,-0.92811,264.19 |
| 14494 | | |
| 14495 | | > view matrix models |
| 14496 | | > #1,0.64053,-0.70366,-0.30755,115.62,-0.76695,-0.60644,-0.2098,311.77,-0.038883,0.37026,-0.92811,265.54 |
| 14497 | | |
| 14498 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14499 | | |
| 14500 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14501 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14502 | | correlation = 0.5527, correlation about mean = 0.05351, overlap = 357.4 |
| 14503 | | steps = 108, shift = 3.94, angle = 12.6 degrees |
| 14504 | | |
| 14505 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14506 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14507 | | Matrix rotation and translation |
| 14508 | | 0.37719090 -0.69831311 0.60834679 158.07359344 |
| 14509 | | 0.32484078 0.71488949 0.61920228 135.74242969 |
| 14510 | | -0.86729780 -0.03594162 0.49649039 130.86496262 |
| 14511 | | Axis -0.34274974 0.77200871 0.53528046 |
| 14512 | | Axis point 167.30008242 0.00000000 -156.54750735 |
| 14513 | | Rotation angle (degrees) 72.88530836 |
| 14514 | | Shift along axis 120.66411199 |
| 14515 | | |
| 14516 | | Average map value = 0.0775 for 3543 atoms, 1680 outside contour |
| 14517 | | |
| 14518 | | > view matrix models |
| 14519 | | > #1,0.64053,-0.70366,-0.30755,114.48,-0.76695,-0.60644,-0.2098,317.02,-0.038883,0.37026,-0.92811,258.02 |
| 14520 | | |
| 14521 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14522 | | |
| 14523 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14524 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14525 | | correlation = 0.5652, correlation about mean = 0.06046, overlap = 366.5 |
| 14526 | | steps = 116, shift = 6.25, angle = 19.2 degrees |
| 14527 | | |
| 14528 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14529 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14530 | | Matrix rotation and translation |
| 14531 | | 0.31326053 -0.61636538 0.72246907 158.30032514 |
| 14532 | | 0.00863927 0.76257836 0.64683815 137.13745245 |
| 14533 | | -0.94962793 -0.19638726 0.24421065 120.65666438 |
| 14534 | | Axis -0.42711696 0.84696332 0.31658212 |
| 14535 | | Axis point 178.38522002 0.00000000 -100.82411565 |
| 14536 | | Rotation angle (degrees) 80.79166597 |
| 14537 | | Shift along axis 86.73538010 |
| 14538 | | |
| 14539 | | Average map value = 0.07914 for 3543 atoms, 1656 outside contour |
| 14540 | | |
| 14541 | | > view matrix models |
| 14542 | | > #1,0.64053,-0.70366,-0.30755,112.76,-0.76695,-0.60644,-0.2098,320.51,-0.038883,0.37026,-0.92811,253.63 |
| 14543 | | |
| 14544 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14545 | | |
| 14546 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14547 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14548 | | correlation = 0.6063, correlation about mean = 0.05911, overlap = 386.4 |
| 14549 | | steps = 252, shift = 12.5, angle = 31.9 degrees |
| 14550 | | |
| 14551 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14552 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14553 | | Matrix rotation and translation |
| 14554 | | -0.16327326 -0.79549187 0.58355335 147.36076278 |
| 14555 | | -0.12937519 0.60364664 0.78668468 137.04210534 |
| 14556 | | -0.97806129 0.05294725 -0.20147627 112.89119672 |
| 14557 | | Axis -0.39671787 0.84433533 0.36015662 |
| 14558 | | Axis point 136.66888257 0.00000000 -46.64372531 |
| 14559 | | Rotation angle (degrees) 112.36784502 |
| 14560 | | Shift along axis 97.90735431 |
| 14561 | | |
| 14562 | | Average map value = 0.08138 for 3543 atoms, 1612 outside contour |
| 14563 | | |
| 14564 | | > view matrix models |
| 14565 | | > #1,0.64053,-0.70366,-0.30755,110.13,-0.76695,-0.60644,-0.2098,322.8,-0.038883,0.37026,-0.92811,251.7 |
| 14566 | | |
| 14567 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14568 | | |
| 14569 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14570 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14571 | | correlation = 0.6063, correlation about mean = 0.05907, overlap = 386.4 |
| 14572 | | steps = 124, shift = 3.98, angle = 0.0302 degrees |
| 14573 | | |
| 14574 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14575 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14576 | | Matrix rotation and translation |
| 14577 | | -0.16313596 -0.79522585 0.58395419 147.36396149 |
| 14578 | | -0.12946046 0.60401966 0.78638428 137.03963432 |
| 14579 | | -0.97807292 0.05268858 -0.20148763 112.89008744 |
| 14580 | | Axis -0.39665129 0.84446462 0.35992674 |
| 14581 | | Axis point 136.67263669 0.00000000 -46.62920230 |
| 14582 | | Rotation angle (degrees) 112.35238838 |
| 14583 | | Shift along axis 97.90517917 |
| 14584 | | |
| 14585 | | Average map value = 0.08138 for 3543 atoms, 1606 outside contour |
| 14586 | | |
| 14587 | | > select add #2.2 |
| 14588 | | |
| 14589 | | 1181 atoms, 1149 bonds, 2 pseudobonds, 200 residues, 4 models selected |
| 14590 | | |
| 14591 | | > select subtract #2.2 |
| 14592 | | |
| 14593 | | 3 models selected |
| 14594 | | |
| 14595 | | > vop zflip #1 |
| 14596 | | |
| 14597 | | > volume zflip #1 |
| 14598 | | |
| 14599 | | Expected a density maps specifier or a keyword |
| 14600 | | |
| 14601 | | > hide #!1 models |
| 14602 | | |
| 14603 | | > show #!1 models |
| 14604 | | |
| 14605 | | > volume flip #1 axis z |
| 14606 | | |
| 14607 | | Opened cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip as #6, grid size |
| 14608 | | 300,300,300, pixel 0.839, shown at step 1, values float32 |
| 14609 | | |
| 14610 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14611 | | |
| 14612 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14613 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14614 | | correlation = 0.6063, correlation about mean = 0.05907, overlap = 386.4 |
| 14615 | | steps = 100, shift = 0.0145, angle = 0.065 degrees |
| 14616 | | |
| 14617 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14618 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14619 | | Matrix rotation and translation |
| 14620 | | -0.16324263 -0.79580171 0.58313932 147.35653866 |
| 14621 | | -0.12910144 0.60321608 0.78705983 137.04088154 |
| 14622 | | -0.97810258 0.05319759 -0.20120973 112.89830149 |
| 14623 | | Axis -0.39679712 0.84415885 0.36048285 |
| 14624 | | Axis point 136.67323319 0.00000000 -46.68424204 |
| 14625 | | Rotation angle (degrees) 112.37197713 |
| 14626 | | Shift along axis 97.91152346 |
| 14627 | | |
| 14628 | | Average map value = 0.08137 for 3543 atoms, 1611 outside contour |
| 14629 | | |
| 14630 | | > undo |
| 14631 | | |
| 14632 | | > ui mousemode right zoom |
| 14633 | | |
| 14634 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14635 | | |
| 14636 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14637 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14638 | | correlation = 0.6063, correlation about mean = 0.05912, overlap = 386.4 |
| 14639 | | steps = 104, shift = 0.0108, angle = 0.0373 degrees |
| 14640 | | |
| 14641 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14642 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14643 | | Matrix rotation and translation |
| 14644 | | -0.16329118 -0.79549083 0.58354977 147.36066444 |
| 14645 | | -0.12940430 0.60364832 0.78667861 137.04258373 |
| 14646 | | -0.97805445 0.05294383 -0.20151038 112.89063373 |
| 14647 | | Axis -0.39672088 0.84433915 0.36014435 |
| 14648 | | Axis point 136.66840396 0.00000000 -46.64038321 |
| 14649 | | Rotation angle (degrees) 112.36940436 |
| 14650 | | Shift along axis 97.90628961 |
| 14651 | | |
| 14652 | | Average map value = 0.08138 for 3543 atoms, 1612 outside contour |
| 14653 | | |
| 14654 | | > ui mousemode right "translate selected models" |
| 14655 | | |
| 14656 | | > view matrix models |
| 14657 | | > #1,0.64053,-0.70366,-0.30755,112.18,-0.76695,-0.60644,-0.2098,324.87,-0.038883,0.37026,-0.92811,252.91 |
| 14658 | | |
| 14659 | | > view matrix models |
| 14660 | | > #1,0.64053,-0.70366,-0.30755,112.87,-0.76695,-0.60644,-0.2098,325.81,-0.038883,0.37026,-0.92811,253.72 |
| 14661 | | |
| 14662 | | > select add #6 |
| 14663 | | |
| 14664 | | 4 models selected |
| 14665 | | |
| 14666 | | > view matrix models |
| 14667 | | > #1,0.64053,-0.70366,-0.30755,115.64,-0.76695,-0.60644,-0.2098,327.55,-0.038883,0.37026,-0.92811,253.65,#6,0.64053,-0.70366,-0.30755,112.9,-0.76695,-0.60644,-0.2098,324.54,-0.038883,0.37026,-0.92811,251.63 |
| 14668 | | |
| 14669 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14670 | | |
| 14671 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14672 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14673 | | correlation = 0.6076, correlation about mean = 0.05369, overlap = 378.6 |
| 14674 | | steps = 144, shift = 7.79, angle = 8.68 degrees |
| 14675 | | |
| 14676 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14677 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14678 | | Matrix rotation and translation |
| 14679 | | -0.22984502 -0.85116201 0.47190517 141.93670262 |
| 14680 | | -0.20359875 0.51621053 0.83190999 138.17140324 |
| 14681 | | -0.95169260 0.09513107 -0.29194394 112.02570523 |
| 14682 | | Axis -0.42617493 0.82345146 0.37456992 |
| 14683 | | Axis point 133.38912643 0.00000000 -39.16359168 |
| 14684 | | Rotation angle (degrees) 120.18470563 |
| 14685 | | Shift along axis 95.24903917 |
| 14686 | | |
| 14687 | | Average map value = 0.08053 for 3543 atoms, 1660 outside contour |
| 14688 | | |
| 14689 | | > ui mousemode right "rotate selected models" |
| 14690 | | |
| 14691 | | > view matrix models |
| 14692 | | > #1,0.8206,-0.56166,-0.10563,47.824,-0.51958,-0.65621,-0.5472,355.19,0.23802,0.50392,-0.83031,191.16,#6,0.8206,-0.56166,-0.10563,46.305,-0.51958,-0.65621,-0.5472,351.05,0.23802,0.50392,-0.83031,190.04 |
| 14693 | | |
| 14694 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14695 | | |
| 14696 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14697 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14698 | | correlation = 0.5785, correlation about mean = 0.04659, overlap = 381 |
| 14699 | | steps = 164, shift = 8.24, angle = 12.6 degrees |
| 14700 | | |
| 14701 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14702 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14703 | | Matrix rotation and translation |
| 14704 | | 0.26053827 -0.94465403 0.19937043 144.17695528 |
| 14705 | | -0.06928341 0.18767618 0.97978439 144.34227006 |
| 14706 | | -0.96297436 -0.26908440 -0.01655203 120.70101907 |
| 14707 | | Axis -0.65128406 0.60616186 0.45650506 |
| 14708 | | Axis point 0.00000000 195.70737964 45.06369174 |
| 14709 | | Rotation angle (degrees) 106.50916958 |
| 14710 | | Shift along axis 48.69525342 |
| 14711 | | |
| 14712 | | Average map value = 0.07964 for 3543 atoms, 1637 outside contour |
| 14713 | | |
| 14714 | | > ui mousemode right "translate selected models" |
| 14715 | | |
| 14716 | | > view matrix models |
| 14717 | | > #1,0.8206,-0.56166,-0.10563,41.908,-0.51958,-0.65621,-0.5472,362.34,0.23802,0.50392,-0.83031,191.88,#6,0.8206,-0.56166,-0.10563,40.389,-0.51958,-0.65621,-0.5472,358.2,0.23802,0.50392,-0.83031,190.76 |
| 14718 | | |
| 14719 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14720 | | |
| 14721 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14722 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14723 | | correlation = 0.5785, correlation about mean = 0.04659, overlap = 381 |
| 14724 | | steps = 132, shift = 9.31, angle = 0.00566 degrees |
| 14725 | | |
| 14726 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14727 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14728 | | Matrix rotation and translation |
| 14729 | | 0.26054529 -0.94463371 0.19945753 144.17884293 |
| 14730 | | -0.06926669 0.18777106 0.97976739 144.34156099 |
| 14731 | | -0.96297366 -0.26908955 -0.01650878 120.69945316 |
| 14732 | | Axis -0.65126327 0.60619332 0.45649295 |
| 14733 | | Axis point -0.00000000 195.71825702 45.05911570 |
| 14734 | | Rotation angle (degrees) 106.50483256 |
| 14735 | | Shift along axis 48.69895474 |
| 14736 | | |
| 14737 | | Average map value = 0.07963 for 3543 atoms, 1638 outside contour |
| 14738 | | |
| 14739 | | > select add #4 |
| 14740 | | |
| 14741 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 7 models selected |
| 14742 | | |
| 14743 | | > select subtract #6 |
| 14744 | | |
| 14745 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 14746 | | |
| 14747 | | > ui mousemode right translate |
| 14748 | | |
| 14749 | | > ui mousemode right "rotate selected models" |
| 14750 | | |
| 14751 | | > view matrix models |
| 14752 | | > #1,0.52378,-0.56052,-0.64146,148.88,-0.72875,-0.68478,0.0033162,326.57,-0.44112,0.46573,-0.76715,282.43,#4,0.793,-0.42742,-0.43412,66.073,-0.14563,0.55893,-0.81633,123.06,0.59155,0.71057,0.38098,193.46 |
| 14753 | | |
| 14754 | | > ui mousemode right "translate selected models" |
| 14755 | | |
| 14756 | | > view matrix models |
| 14757 | | > #1,0.52378,-0.56052,-0.64146,157.9,-0.72875,-0.68478,0.0033162,326.05,-0.44112,0.46573,-0.76715,277.37,#4,0.793,-0.42742,-0.43412,75.087,-0.14563,0.55893,-0.81633,122.54,0.59155,0.71057,0.38098,188.4 |
| 14758 | | |
| 14759 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14760 | | |
| 14761 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14762 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14763 | | correlation = 0.5785, correlation about mean = 0.0466, overlap = 381 |
| 14764 | | steps = 48, shift = 0.0113, angle = 0.00814 degrees |
| 14765 | | |
| 14766 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14767 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14768 | | Matrix rotation and translation |
| 14769 | | 0.26049480 -0.94463924 0.19949727 144.17886741 |
| 14770 | | -0.06915552 0.18784424 0.97976122 144.34438538 |
| 14771 | | -0.96299531 -0.26901904 -0.01639457 120.68998048 |
| 14772 | | Axis -0.65120951 0.60621251 0.45654415 |
| 14773 | | Axis point 0.00000000 195.72566373 45.05769994 |
| 14774 | | Rotation angle (degrees) 106.50074222 |
| 14775 | | Shift along axis 48.71302750 |
| 14776 | | |
| 14777 | | Average map value = 0.07962 for 3543 atoms, 1636 outside contour |
| 14778 | | |
| 14779 | | > select add #6 |
| 14780 | | |
| 14781 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 10 models selected |
| 14782 | | |
| 14783 | | > select subtract #4 |
| 14784 | | |
| 14785 | | 7 models selected |
| 14786 | | |
| 14787 | | > view matrix models |
| 14788 | | > #1,0.52378,-0.56052,-0.64146,161.49,-0.72875,-0.68478,0.0033162,327.16,-0.44112,0.46573,-0.76715,274.85,#6,0.8206,-0.56166,-0.10563,43.979,-0.51958,-0.65621,-0.5472,359.31,0.23802,0.50392,-0.83031,188.24 |
| 14789 | | |
| 14790 | | > ui mousemode right "rotate selected models" |
| 14791 | | |
| 14792 | | > view matrix models |
| 14793 | | > #1,0.46747,-0.56324,-0.68135,175.91,-0.72652,0.19432,-0.65909,327.1,0.50363,0.80312,-0.31837,33.128,#6,0.80932,-0.56108,-0.17377,55.361,-0.041361,0.24066,-0.96973,268.22,0.58592,0.792,0.17157,-32.79 |
| 14794 | | |
| 14795 | | > select add #2.3 |
| 14796 | | |
| 14797 | | 1181 atoms, 1149 bonds, 2 pseudobonds, 200 residues, 6 models selected |
| 14798 | | |
| 14799 | | > select subtract #2.3 |
| 14800 | | |
| 14801 | | 5 models selected |
| 14802 | | |
| 14803 | | > select add #4 |
| 14804 | | |
| 14805 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 7 models selected |
| 14806 | | |
| 14807 | | > select subtract #6 |
| 14808 | | |
| 14809 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 14810 | | |
| 14811 | | > view matrix models |
| 14812 | | > #1,0.57379,-0.50774,-0.64262,144.62,-0.5774,0.30567,-0.75708,300.83,0.58083,0.80546,-0.11778,-9.5657,#4,0.85079,-0.41457,-0.32294,76.744,0.031834,0.65406,-0.75577,123.74,0.52454,0.63272,0.56967,190.83 |
| 14813 | | |
| 14814 | | > ui mousemode right "translate selected models" |
| 14815 | | |
| 14816 | | > view matrix models |
| 14817 | | > #1,0.57379,-0.50774,-0.64262,143.63,-0.5774,0.30567,-0.75708,325.49,0.58083,0.80546,-0.11778,-18.397,#4,0.85079,-0.41457,-0.32294,75.754,0.031834,0.65406,-0.75577,148.4,0.52454,0.63272,0.56967,182 |
| 14818 | | |
| 14819 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14820 | | |
| 14821 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14822 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14823 | | correlation = 0.573, correlation about mean = 0.09548, overlap = 373.3 |
| 14824 | | steps = 180, shift = 23.7, angle = 18.3 degrees |
| 14825 | | |
| 14826 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14827 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14828 | | Matrix rotation and translation |
| 14829 | | 0.83420851 -0.14970999 0.53073824 163.53286388 |
| 14830 | | -0.21290860 0.80037682 0.56041669 138.15832730 |
| 14831 | | -0.50869056 -0.58050311 0.63580661 137.01270142 |
| 14832 | | Axis -0.73860188 0.67289924 -0.04091314 |
| 14833 | | Axis point 0.00000000 337.98225100 -166.27033092 |
| 14834 | | Rotation angle (degrees) 50.56547919 |
| 14835 | | Shift along axis -33.42466726 |
| 14836 | | |
| 14837 | | Average map value = 0.08111 for 3543 atoms, 1656 outside contour |
| 14838 | | |
| 14839 | | > select add #6 |
| 14840 | | |
| 14841 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 10 models selected |
| 14842 | | |
| 14843 | | > view matrix models |
| 14844 | | > #1,0.57379,-0.50774,-0.64262,142.64,-0.5774,0.30567,-0.75708,312.43,0.58083,0.80546,-0.11778,-12.842,#4,0.91366,-0.11925,-0.38859,78.282,-0.16163,0.77058,-0.6165,156.51,0.37296,0.62608,0.68478,177.29,#6,0.80932,-0.56108,-0.17377,54.374,-0.041361,0.24066,-0.96973,255.17,0.58592,0.792,0.17157,-27.235 |
| 14845 | | |
| 14846 | | > select subtract #4 |
| 14847 | | |
| 14848 | | 7 models selected |
| 14849 | | |
| 14850 | | > view matrix models |
| 14851 | | > #1,0.57379,-0.50774,-0.64262,143.33,-0.5774,0.30567,-0.75708,312.19,0.58083,0.80546,-0.11778,-13.148,#6,0.80932,-0.56108,-0.17377,55.057,-0.041361,0.24066,-0.96973,254.93,0.58592,0.792,0.17157,-27.542 |
| 14852 | | |
| 14853 | | > view matrix models |
| 14854 | | > #1,0.57379,-0.50774,-0.64262,146.58,-0.5774,0.30567,-0.75708,313.62,0.58083,0.80546,-0.11778,-15.589,#6,0.80932,-0.56108,-0.17377,58.308,-0.041361,0.24066,-0.96973,256.36,0.58592,0.792,0.17157,-29.982 |
| 14855 | | |
| 14856 | | > select add #4 |
| 14857 | | |
| 14858 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 7 models selected |
| 14859 | | |
| 14860 | | > select subtract #6 |
| 14861 | | |
| 14862 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 14863 | | |
| 14864 | | > view matrix models |
| 14865 | | > #1,0.57379,-0.50774,-0.64262,148.34,-0.5774,0.30567,-0.75708,300.34,0.58083,0.80546,-0.11778,5.245,#4,0.91366,-0.11925,-0.38859,80.042,-0.16163,0.77058,-0.6165,143.23,0.37296,0.62608,0.68478,198.12 |
| 14866 | | |
| 14867 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14868 | | |
| 14869 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14870 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14871 | | correlation = 0.573, correlation about mean = 0.09553, overlap = 373.3 |
| 14872 | | steps = 72, shift = 4.95, angle = 0.0414 degrees |
| 14873 | | |
| 14874 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14875 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14876 | | Matrix rotation and translation |
| 14877 | | 0.83406301 -0.15032939 0.53079182 163.54326916 |
| 14878 | | -0.21237342 0.80050826 0.56043202 138.15694787 |
| 14879 | | -0.50915264 -0.58016169 0.63574837 137.00002774 |
| 14880 | | Axis -0.73836236 0.67320715 -0.04016415 |
| 14881 | | Axis point 0.00000000 338.12371798 -166.09890673 |
| 14882 | | Rotation angle (degrees) 50.56816058 |
| 14883 | | Shift along axis -33.24843799 |
| 14884 | | |
| 14885 | | Average map value = 0.0811 for 3543 atoms, 1661 outside contour |
| 14886 | | |
| 14887 | | > ui mousemode right "rotate selected models" |
| 14888 | | |
| 14889 | | > view matrix models |
| 14890 | | > #1,0.040932,-0.29411,0.9549,-1.9951,0.64875,-0.71902,-0.24927,185.45,0.7599,0.62969,0.16137,-33.809,#4,-0.38959,-0.79558,0.46397,94.887,0.82071,-0.52849,-0.21708,158.06,0.41791,0.29621,0.85884,199.57 |
| 14891 | | |
| 14892 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14893 | | |
| 14894 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14895 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14896 | | correlation = 0.573, correlation about mean = 0.09548, overlap = 373.3 |
| 14897 | | steps = 44, shift = 0.00951, angle = 0.0104 degrees |
| 14898 | | |
| 14899 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14900 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14901 | | Matrix rotation and translation |
| 14902 | | 0.83415796 -0.15032112 0.53064495 163.54365883 |
| 14903 | | -0.21227006 0.80052053 0.56045366 138.15907661 |
| 14904 | | -0.50904019 -0.58014692 0.63585189 136.99293675 |
| 14905 | | Axis -0.73844965 0.67311480 -0.04010710 |
| 14906 | | Axis point 0.00000000 338.10881363 -166.12488369 |
| 14907 | | Rotation angle (degrees) 50.56034398 |
| 14908 | | Shift along axis -33.26622760 |
| 14909 | | |
| 14910 | | Average map value = 0.08108 for 3543 atoms, 1667 outside contour |
| 14911 | | |
| 14912 | | > ui mousemode right "move picked models" |
| 14913 | | |
| 14914 | | > view matrix models |
| 14915 | | > #4,-0.38951,-0.79557,0.46406,90.125,0.82067,-0.5285,-0.21722,165.24,0.41807,0.29623,0.85876,195.44 |
| 14916 | | |
| 14917 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14918 | | |
| 14919 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14920 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14921 | | correlation = 0.5644, correlation about mean = 0.05561, overlap = 352.3 |
| 14922 | | steps = 488, shift = 8.04, angle = 34.1 degrees |
| 14923 | | |
| 14924 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14925 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14926 | | Matrix rotation and translation |
| 14927 | | 0.39149153 -0.38386971 0.83628848 160.70337203 |
| 14928 | | -0.24403022 0.83297673 0.49658737 130.96755801 |
| 14929 | | -0.88723370 -0.39848941 0.23242753 119.99926981 |
| 14930 | | Axis -0.45969448 0.88516836 0.07181891 |
| 14931 | | Axis point 197.29550905 0.00000000 -76.45814809 |
| 14932 | | Rotation angle (degrees) 76.79429008 |
| 14933 | | Shift along axis 50.67210217 |
| 14934 | | |
| 14935 | | Average map value = 0.07592 for 3543 atoms, 1709 outside contour |
| 14936 | | |
| 14937 | | > view matrix models |
| 14938 | | > #4,-0.75942,-0.64121,0.11012,76.615,0.6506,-0.74863,0.12755,165.26,0.00065796,0.16851,0.9857,198.38 |
| 14939 | | |
| 14940 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14941 | | |
| 14942 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14943 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14944 | | correlation = 0.5663, correlation about mean = 0.04739, overlap = 347.4 |
| 14945 | | steps = 144, shift = 10.7, angle = 26 degrees |
| 14946 | | |
| 14947 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14948 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14949 | | Matrix rotation and translation |
| 14950 | | 0.13180167 -0.58728036 0.79858005 157.88666229 |
| 14951 | | -0.49611769 0.65837122 0.56605174 130.59096981 |
| 14952 | | -0.85819319 -0.47079625 -0.20458575 111.39626896 |
| 14953 | | Axis -0.52992483 0.84676373 0.04659252 |
| 14954 | | Axis point 172.39604207 0.00000000 -31.58641661 |
| 14955 | | Rotation angle (degrees) 101.95869213 |
| 14956 | | Shift along axis 32.10186733 |
| 14957 | | |
| 14958 | | Average map value = 0.07472 for 3543 atoms, 1742 outside contour |
| 14959 | | |
| 14960 | | > ui mousemode right "rotate selected models" |
| 14961 | | |
| 14962 | | > view matrix models |
| 14963 | | > #1,-0.49556,0.045401,0.86738,43.387,-0.2195,-0.97277,-0.074489,321.79,0.84038,-0.2273,0.49203,25.69,#4,-0.83222,-0.087435,-0.5475,67.696,0.5176,-0.47647,-0.71068,151.8,-0.19873,-0.87483,0.44178,183.5 |
| 14964 | | |
| 14965 | | > view matrix models |
| 14966 | | > #1,-0.72881,0.20688,0.65271,81.691,-0.44645,-0.86634,-0.22391,358.52,0.51915,-0.45459,0.72376,73.435,#4,-0.75885,0.25692,-0.59845,66.348,0.56312,-0.20277,-0.80111,149.95,-0.32717,-0.94492,0.0091943,176.66 |
| 14967 | | |
| 14968 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 14969 | | |
| 14970 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 14971 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 14972 | | correlation = 0.5663, correlation about mean = 0.0474, overlap = 347.4 |
| 14973 | | steps = 44, shift = 0.0173, angle = 0.0285 degrees |
| 14974 | | |
| 14975 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 14976 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 14977 | | Matrix rotation and translation |
| 14978 | | 0.13216783 -0.58745510 0.79839099 157.89324892 |
| 14979 | | -0.49625090 0.65803173 0.56632966 130.58135666 |
| 14980 | | -0.85805985 -0.47105281 -0.20455450 111.39204791 |
| 14981 | | Axis -0.53019467 0.84659364 0.04661345 |
| 14982 | | Axis point 172.43682056 0.00000000 -31.59838686 |
| 14983 | | Rotation angle (degrees) 101.95699598 |
| 14984 | | Shift along axis 32.02755515 |
| 14985 | | |
| 14986 | | Average map value = 0.0747 for 3543 atoms, 1746 outside contour |
| 14987 | | |
| 14988 | | > volume #1 step 4 |
| 14989 | | |
| 14990 | | > hide #!6 models |
| 14991 | | |
| 14992 | | > show #!6 models |
| 14993 | | |
| 14994 | | > select add #6 |
| 14995 | | |
| 14996 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 10 models selected |
| 14997 | | |
| 14998 | | > view matrix models |
| 14999 | | > #1,-0.59103,-0.46559,0.65872,165.49,-0.23875,-0.67906,-0.69418,342.92,0.77051,-0.56755,0.29019,94.692,#4,-0.41229,-0.26946,-0.87029,84.751,0.90107,0.020404,-0.43319,139.23,0.13448,-0.9628,0.23439,174.56,#6,0.8207,-0.0015957,-0.57136,55.063,-0.56087,0.18846,-0.80617,298.72,0.10897,0.98208,0.15378,7.9188 |
| 15000 | | |
| 15001 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 15002 | | |
| 15003 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15004 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 15005 | | correlation = 0.5663, correlation about mean = 0.04745, overlap = 347.3 |
| 15006 | | steps = 48, shift = 0.00462, angle = 0.00786 degrees |
| 15007 | | |
| 15008 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15009 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 15010 | | Matrix rotation and translation |
| 15011 | | 0.13207204 -0.58739250 0.79845289 157.89396756 |
| 15012 | | -0.49622980 0.65812500 0.56623976 130.58077180 |
| 15013 | | -0.85808680 -0.47100057 -0.20456175 111.38719173 |
| 15014 | | Axis -0.53012258 0.84663995 0.04659229 |
| 15015 | | Axis point 172.42374430 0.00000000 -31.59674876 |
| 15016 | | Rotation angle (degrees) 101.95728192 |
| 15017 | | Shift along axis 32.04152496 |
| 15018 | | |
| 15019 | | Average map value = 0.0747 for 3543 atoms, 1635 outside contour |
| 15020 | | |
| 15021 | | > select subtract #6 |
| 15022 | | |
| 15023 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 15024 | | |
| 15025 | | > view matrix models |
| 15026 | | > #1,-0.91004,-0.39631,-0.1215,292.76,0.16515,-0.077809,-0.98319,242.67,0.38019,-0.91481,0.13626,212.12,#4,0.18073,0.33096,-0.92618,83.79,0.90409,0.31487,0.28893,149.07,0.38725,-0.88956,-0.24231,167.87 |
| 15027 | | |
| 15028 | | > view matrix models |
| 15029 | | > #1,-0.77809,0.059881,-0.62529,274.31,0.60674,0.32933,-0.72347,97.5,0.16261,-0.94231,-0.29258,296.52,#4,0.40407,0.79097,-0.45945,89.628,0.53751,0.2011,0.81893,155.72,0.74014,-0.57787,-0.34389,166.56 |
| 15030 | | |
| 15031 | | > view matrix models |
| 15032 | | > #1,-0.35858,0.88301,-0.30285,72.455,0.93348,0.33747,-0.12133,-20.752,-0.0049365,-0.32621,-0.94528,318.95,#4,-0.22566,0.9344,0.27563,97.407,0.05994,-0.26908,0.96125,157.19,0.97236,0.23344,0.0047134,170.28 |
| 15033 | | |
| 15034 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 15035 | | |
| 15036 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15037 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 15038 | | correlation = 0.5663, correlation about mean = 0.04739, overlap = 347.3 |
| 15039 | | steps = 44, shift = 0.00449, angle = 0.0202 degrees |
| 15040 | | |
| 15041 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15042 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 15043 | | Matrix rotation and translation |
| 15044 | | 0.13239576 -0.58747205 0.79834074 157.89366888 |
| 15045 | | -0.49621529 0.65795047 0.56645526 130.58093214 |
| 15046 | | -0.85804530 -0.47114516 -0.20440277 111.39272445 |
| 15047 | | Axis -0.53028894 0.84653320 0.04663881 |
| 15048 | | Axis point 172.45943754 0.00000000 -31.61571698 |
| 15049 | | Rotation angle (degrees) 101.94825786 |
| 15050 | | Shift along axis 32.00705223 |
| 15051 | | |
| 15052 | | Average map value = 0.07469 for 3543 atoms, 1635 outside contour |
| 15053 | | |
| 15054 | | > view matrix models |
| 15055 | | > #1,-0.68609,0.71721,0.122,91.023,0.61712,0.66255,-0.42449,18.451,-0.38528,-0.21595,-0.89717,353.78,#4,-0.55141,0.81747,-0.1664,89.939,0.11717,0.27338,0.95474,155.12,0.82596,0.50696,-0.24653,164.81 |
| 15056 | | |
| 15057 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 15058 | | |
| 15059 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15060 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 15061 | | correlation = 0.5663, correlation about mean = 0.0474, overlap = 347.3 |
| 15062 | | steps = 64, shift = 0.00205, angle = 0.00612 degrees |
| 15063 | | |
| 15064 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15065 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 15066 | | Matrix rotation and translation |
| 15067 | | 0.13249641 -0.58744676 0.79834266 157.89354026 |
| 15068 | | -0.49618944 0.65794339 0.56648612 130.58045819 |
| 15069 | | -0.85804471 -0.47118658 -0.20430974 111.39260686 |
| 15070 | | Axis -0.53031518 0.84651680 0.04663815 |
| 15071 | | Axis point 172.46829253 0.00000000 -31.62420459 |
| 15072 | | Rotation angle (degrees) 101.94279396 |
| 15073 | | Shift along axis 32.00035571 |
| 15074 | | |
| 15075 | | Average map value = 0.07468 for 3543 atoms, 1635 outside contour |
| 15076 | | |
| 15077 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 15078 | | |
| 15079 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15080 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 15081 | | correlation = 0.5663, correlation about mean = 0.04741, overlap = 347.3 |
| 15082 | | steps = 64, shift = 0.000479, angle = 0.00174 degrees |
| 15083 | | |
| 15084 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15085 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 15086 | | Matrix rotation and translation |
| 15087 | | 0.13248302 -0.58742890 0.79835802 157.89338588 |
| 15088 | | -0.49618140 0.65796570 0.56646726 130.58029599 |
| 15089 | | -0.85805144 -0.47117769 -0.20430201 111.39233786 |
| 15090 | | Axis -0.53030005 0.84652656 0.04663306 |
| 15091 | | Axis point 172.46625781 0.00000000 -31.62412575 |
| 15092 | | Rotation angle (degrees) 101.94230654 |
| 15093 | | Shift along axis 32.00338467 |
| 15094 | | |
| 15095 | | Average map value = 0.07468 for 3543 atoms, 1635 outside contour |
| 15096 | | |
| 15097 | | > ui mousemode right "translate selected models" |
| 15098 | | |
| 15099 | | > view matrix models |
| 15100 | | > #1,-0.68609,0.71721,0.122,87.344,0.61712,0.66255,-0.42449,19.409,-0.38528,-0.21595,-0.89717,360.67,#4,-0.55145,0.81745,-0.16639,86.258,0.11725,0.27343,0.95472,156.08,0.82593,0.50697,-0.24663,171.7 |
| 15101 | | |
| 15102 | | > ui mousemode right "rotate selected models" |
| 15103 | | |
| 15104 | | > view matrix models |
| 15105 | | > #1,0.32696,0.015655,0.94491,-63.236,-0.67135,0.70755,0.22058,123.34,-0.66512,-0.70649,0.24185,331.13,#4,-0.77523,-0.62699,0.076851,95.689,-0.62929,0.75598,-0.18024,134.3,0.054911,-0.18809,-0.98062,160.8 |
| 15106 | | |
| 15107 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 15108 | | |
| 15109 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15110 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 15111 | | correlation = 0.5663, correlation about mean = 0.04743, overlap = 347.3 |
| 15112 | | steps = 64, shift = 0.00228, angle = 0.00843 degrees |
| 15113 | | |
| 15114 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15115 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 15116 | | Matrix rotation and translation |
| 15117 | | 0.13238796 -0.58735160 0.79843066 157.89259492 |
| 15118 | | -0.49616825 0.65806479 0.56636365 130.58023016 |
| 15119 | | -0.85807371 -0.47113567 -0.20430536 111.39156590 |
| 15120 | | Axis -0.53022559 0.84657501 0.04660026 |
| 15121 | | Axis point 172.45456984 0.00000000 -31.61924035 |
| 15122 | | Rotation angle (degrees) 101.94228654 |
| 15123 | | Shift along axis 32.01814219 |
| 15124 | | |
| 15125 | | Average map value = 0.07469 for 3543 atoms, 1635 outside contour |
| 15126 | | |
| 15127 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 15128 | | |
| 15129 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15130 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc using 13679 points |
| 15131 | | correlation = 0.5663, correlation about mean = 0.0474, overlap = 347.4 |
| 15132 | | steps = 60, shift = 0.00418, angle = 0.0111 degrees |
| 15133 | | |
| 15134 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15135 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc (#1) coordinates: |
| 15136 | | Matrix rotation and translation |
| 15137 | | 0.13225262 -0.58745973 0.79837354 157.89338965 |
| 15138 | | -0.49622104 0.65801181 0.56637896 130.58139822 |
| 15139 | | -0.85806405 -0.47107485 -0.20448609 111.39219544 |
| 15140 | | Axis -0.53022349 0.84657466 0.04663041 |
| 15141 | | Axis point 172.44481153 0.00000000 -31.60660406 |
| 15142 | | Rotation angle (degrees) 101.95309291 |
| 15143 | | Shift along axis 32.02238284 |
| 15144 | | |
| 15145 | | Average map value = 0.07469 for 3543 atoms, 1635 outside contour |
| 15146 | | |
| 15147 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15148 | | |
| 15149 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15150 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15151 | | correlation = 0.5805, correlation about mean = 0.06949, overlap = 369.8 |
| 15152 | | steps = 144, shift = 6.02, angle = 4.82 degrees |
| 15153 | | |
| 15154 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15155 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15156 | | Matrix rotation and translation |
| 15157 | | -0.33594088 -0.93799198 0.08552642 139.52600939 |
| 15158 | | -0.02478533 -0.08196856 -0.99632667 117.44412653 |
| 15159 | | 0.94155691 -0.33682666 0.00428815 138.70658875 |
| 15160 | | Axis 0.46614179 -0.60505167 0.64546441 |
| 15161 | | Axis point -34.25066511 156.03086051 0.00000000 |
| 15162 | | Rotation angle (degrees) 134.97600959 |
| 15163 | | Shift along axis 83.50930538 |
| 15164 | | |
| 15165 | | Average map value = 0.07977 for 3543 atoms, 1692 outside contour |
| 15166 | | |
| 15167 | | > view matrix models |
| 15168 | | > #1,0.36987,0.88672,0.27734,-104.28,-0.77755,0.45882,-0.42999,240.48,-0.50853,-0.056601,0.85918,160.53,#4,-0.64372,0.30415,0.70223,97.862,0.10654,0.94431,-0.31134,130.62,-0.75781,-0.1256,-0.64027,162.65 |
| 15169 | | |
| 15170 | | > view matrix models |
| 15171 | | > #1,0.14206,-0.44128,-0.88605,221.32,-0.43419,-0.8322,0.34485,266.78,-0.88955,0.33572,-0.30982,294.87,#4,0.99622,-0.011939,0.086052,93.981,0.068773,-0.49685,-0.86511,126.83,0.053084,0.86775,-0.49415,163.97 |
| 15172 | | |
| 15173 | | > view matrix models |
| 15174 | | > #1,0.37005,-0.71149,-0.59737,189.92,-0.41342,-0.70195,0.57995,221.25,-0.83195,0.032357,-0.5539,351.76,#4,0.88762,-0.45502,0.071308,94.427,-0.1981,-0.51695,-0.83278,126.08,0.41579,0.72507,-0.54899,165.33 |
| 15175 | | |
| 15176 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15177 | | |
| 15178 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15179 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15180 | | correlation = 0.591, correlation about mean = 0.04427, overlap = 359.1 |
| 15181 | | steps = 136, shift = 4.21, angle = 21.2 degrees |
| 15182 | | |
| 15183 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15184 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15185 | | Matrix rotation and translation |
| 15186 | | 0.93819205 0.24148613 0.24795186 139.40094587 |
| 15187 | | 0.12060867 0.44338610 -0.88817921 115.63926959 |
| 15188 | | -0.32442137 0.86318782 0.38685600 138.71357610 |
| 15189 | | Axis 0.94848671 0.30997980 -0.06546353 |
| 15190 | | Axis point 0.00000000 -82.81961013 126.61368650 |
| 15191 | | Rotation angle (degrees) 67.40485615 |
| 15192 | | Shift along axis 158.98510352 |
| 15193 | | |
| 15194 | | Average map value = 0.07697 for 3543 atoms, 1715 outside contour |
| 15195 | | |
| 15196 | | > ui mousemode right "translate selected models" |
| 15197 | | |
| 15198 | | > view matrix models |
| 15199 | | > #1,0.37005,-0.71149,-0.59737,199.71,-0.41342,-0.70195,0.57995,223.8,-0.83195,0.032357,-0.5539,348.38,#4,0.95514,-0.29571,-0.016122,99.812,-0.24194,-0.74775,-0.61833,133.05,0.17079,0.59449,-0.78575,154.63 |
| 15200 | | |
| 15201 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15202 | | |
| 15203 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15204 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15205 | | correlation = 0.6059, correlation about mean = 0.06652, overlap = 391.9 |
| 15206 | | steps = 92, shift = 6.16, angle = 14.5 degrees |
| 15207 | | |
| 15208 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15209 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15210 | | Matrix rotation and translation |
| 15211 | | 0.95757458 0.28417370 0.04791892 137.75730586 |
| 15212 | | -0.02839736 0.25851313 -0.96559026 112.47995897 |
| 15213 | | -0.28678303 0.92326392 0.25561539 132.33680481 |
| 15214 | | Axis 0.97184368 0.17220915 -0.16082248 |
| 15215 | | Axis point 0.00000000 -56.43735165 136.29153206 |
| 15216 | | Rotation angle (degrees) 76.35817601 |
| 15217 | | Shift along axis 131.96591250 |
| 15218 | | |
| 15219 | | Average map value = 0.08465 for 3543 atoms, 1556 outside contour |
| 15220 | | |
| 15221 | | > view matrix models |
| 15222 | | > #1,0.37005,-0.71149,-0.59737,207.12,-0.41342,-0.70195,0.57995,223.49,-0.83195,0.032357,-0.5539,347.11,#4,0.94978,-0.29471,-0.10518,99.743,-0.31124,-0.85497,-0.41492,135.65,0.032354,0.42682,-0.90376,152.47 |
| 15223 | | |
| 15224 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15225 | | |
| 15226 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15227 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15228 | | correlation = 0.6059, correlation about mean = 0.0665, overlap = 391.9 |
| 15229 | | steps = 100, shift = 7.53, angle = 0.00359 degrees |
| 15230 | | |
| 15231 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15232 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15233 | | Matrix rotation and translation |
| 15234 | | 0.95756087 0.28422332 0.04789857 137.75596536 |
| 15235 | | -0.02843726 0.25853090 -0.96558432 112.47939329 |
| 15236 | | -0.28682485 0.92324367 0.25564160 132.33702812 |
| 15237 | | Axis 0.97183388 0.17222085 -0.16086914 |
| 15238 | | Axis point 0.00000000 -56.44446144 136.29597010 |
| 15239 | | Rotation angle (degrees) 76.35728348 |
| 15240 | | Shift along axis 131.95826674 |
| 15241 | | |
| 15242 | | Average map value = 0.08464 for 3543 atoms, 1555 outside contour |
| 15243 | | |
| 15244 | | > ui mousemode right "rotate selected models" |
| 15245 | | |
| 15246 | | > view matrix models |
| 15247 | | > #1,0.55701,-0.65707,-0.50794,162.9,0.058472,-0.57906,0.81318,113.11,-0.82845,-0.48265,-0.28412,384.36,#4,0.94123,-0.32027,0.10735,95.625,-0.33199,-0.93573,0.11914,144.48,0.062296,-0.14778,-0.98706,154.76 |
| 15248 | | |
| 15249 | | > view matrix models |
| 15250 | | > #1,0.66803,-0.52827,-0.52408,132.11,0.11574,-0.62195,0.77445,115.76,-0.73508,-0.57801,-0.35435,392.97,#4,0.94514,-0.2175,0.24373,97.611,-0.2568,-0.95585,0.14284,145.28,0.2019,-0.19759,-0.95927,155.98 |
| 15251 | | |
| 15252 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15253 | | |
| 15254 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15255 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15256 | | correlation = 0.605, correlation about mean = 0.06018, overlap = 367 |
| 15257 | | steps = 80, shift = 3.45, angle = 2.49 degrees |
| 15258 | | |
| 15259 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15260 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15261 | | Matrix rotation and translation |
| 15262 | | 0.94790616 0.31796082 0.01936043 135.53430003 |
| 15263 | | 0.13342804 -0.34111853 -0.93050260 113.56485699 |
| 15264 | | -0.28925917 0.88461238 -0.36577325 124.40396911 |
| 15265 | | Axis 0.98093678 0.16678631 -0.09972646 |
| 15266 | | Axis point 0.00000000 -2.02338557 99.96127080 |
| 15267 | | Rotation angle (degrees) 112.30226990 |
| 15268 | | Shift along axis 139.48527510 |
| 15269 | | |
| 15270 | | Average map value = 0.07678 for 3543 atoms, 1652 outside contour |
| 15271 | | |
| 15272 | | > ui mousemode right "move picked models" |
| 15273 | | |
| 15274 | | > view matrix models |
| 15275 | | > #4,0.943,-0.24394,0.22636,92.188,-0.27332,-0.95577,0.10865,153.02,0.18985,-0.16433,-0.96796,148.64 |
| 15276 | | |
| 15277 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15278 | | |
| 15279 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15280 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15281 | | correlation = 0.6169, correlation about mean = 0.05467, overlap = 372.2 |
| 15282 | | steps = 100, shift = 2.04, angle = 10.7 degrees |
| 15283 | | |
| 15284 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15285 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15286 | | Matrix rotation and translation |
| 15287 | | 0.96812291 0.24707173 -0.04115328 126.22769461 |
| 15288 | | 0.01386179 -0.21689837 -0.97609576 110.92281617 |
| 15289 | | -0.25009175 0.94441021 -0.21340913 121.12653036 |
| 15290 | | Axis 0.98696842 0.10737570 -0.11984906 |
| 15291 | | Axis point 0.00000000 -5.75292615 107.39341338 |
| 15292 | | Rotation angle (degrees) 103.36138833 |
| 15293 | | Shift along axis 121.97626186 |
| 15294 | | |
| 15295 | | Average map value = 0.07903 for 3543 atoms, 1663 outside contour |
| 15296 | | |
| 15297 | | > view matrix models |
| 15298 | | > #4,0.93741,-0.33648,0.089716,97.9,-0.33877,-0.9408,0.011167,146.26,0.080648,-0.040861,-0.9959,150.36 |
| 15299 | | |
| 15300 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15301 | | |
| 15302 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15303 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15304 | | correlation = 0.5902, correlation about mean = 0.0364, overlap = 373.8 |
| 15305 | | steps = 116, shift = 1.59, angle = 6.56 degrees |
| 15306 | | |
| 15307 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15308 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15309 | | Matrix rotation and translation |
| 15310 | | 0.96407314 0.26563544 -0.00088155 137.04654841 |
| 15311 | | 0.02814955 -0.10546222 -0.99402480 109.05233501 |
| 15312 | | -0.26414119 0.95828781 -0.10915081 121.49127874 |
| 15313 | | Axis 0.98390685 0.13267494 -0.11968575 |
| 15314 | | Axis point 0.00000000 -16.37476992 109.93044056 |
| 15315 | | Rotation angle (degrees) 97.19634513 |
| 15316 | | Shift along axis 134.76877480 |
| 15317 | | |
| 15318 | | Average map value = 0.07849 for 3543 atoms, 1693 outside contour |
| 15319 | | |
| 15320 | | > view matrix models |
| 15321 | | > #4,0.94209,-0.32935,0.063227,93.362,-0.32248,-0.9414,-0.098848,141.72,0.092078,0.072735,-0.99309,151.1 |
| 15322 | | |
| 15323 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15324 | | |
| 15325 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15326 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15327 | | correlation = 0.6185, correlation about mean = 0.0717, overlap = 383.5 |
| 15328 | | steps = 100, shift = 4.94, angle = 19.5 degrees |
| 15329 | | |
| 15330 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15331 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15332 | | Matrix rotation and translation |
| 15333 | | 0.92884795 0.36707129 0.05000142 130.73136442 |
| 15334 | | -0.03013708 0.20939392 -0.97736684 111.52470830 |
| 15335 | | -0.36923330 0.90631829 0.20555757 131.23528653 |
| 15336 | | Axis 0.95607426 0.21278478 -0.20160519 |
| 15337 | | Axis point 0.00000000 -55.76578355 132.59913355 |
| 15338 | | Rotation angle (degrees) 80.10170870 |
| 15339 | | Shift along axis 122.26193769 |
| 15340 | | |
| 15341 | | Average map value = 0.08113 for 3543 atoms, 1624 outside contour |
| 15342 | | |
| 15343 | | > view matrix models |
| 15344 | | > #4,0.97332,-0.21691,-0.074851,94.704,-0.22898,-0.89706,-0.37795,124.63,0.014836,0.38501,-0.92279,159.56 |
| 15345 | | |
| 15346 | | > view matrix models |
| 15347 | | > #4,0.97332,-0.21691,-0.074851,109.03,-0.22898,-0.89706,-0.37795,134.98,0.014836,0.38501,-0.92279,150.82 |
| 15348 | | |
| 15349 | | > view matrix models |
| 15350 | | > #4,0.97332,-0.21691,-0.074851,106.86,-0.22898,-0.89706,-0.37795,140.5,0.014836,0.38501,-0.92279,148.08 |
| 15351 | | |
| 15352 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15353 | | |
| 15354 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15355 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15356 | | correlation = 0.5461, correlation about mean = 0.04871, overlap = 332.5 |
| 15357 | | steps = 120, shift = 1.91, angle = 4.32 degrees |
| 15358 | | |
| 15359 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15360 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15361 | | Matrix rotation and translation |
| 15362 | | 0.92388013 0.37738884 0.06342835 144.99934531 |
| 15363 | | -0.04806671 0.27887299 -0.95912431 107.41236370 |
| 15364 | | -0.37965127 0.88306710 0.27578506 121.43630331 |
| 15365 | | Axis 0.94865089 0.22816732 -0.21909167 |
| 15366 | | Axis point 0.00000000 -65.38759879 128.92852112 |
| 15367 | | Rotation angle (degrees) 76.15659442 |
| 15368 | | Shift along axis 135.45606713 |
| 15369 | | |
| 15370 | | Average map value = 0.07135 for 3543 atoms, 1795 outside contour |
| 15371 | | |
| 15372 | | > view matrix models |
| 15373 | | > #4,0.97522,-0.19527,-0.10399,100.9,-0.22118,-0.87101,-0.43866,132.47,-0.0049152,0.45079,-0.89262,152.75 |
| 15374 | | |
| 15375 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15376 | | |
| 15377 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15378 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15379 | | correlation = 0.5741, correlation about mean = 0.0371, overlap = 368.2 |
| 15380 | | steps = 88, shift = 4.32, angle = 4.07 degrees |
| 15381 | | |
| 15382 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15383 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15384 | | Matrix rotation and translation |
| 15385 | | 0.90928615 0.41572479 0.01927664 142.15506496 |
| 15386 | | -0.08214963 0.22470235 -0.97095843 109.91010492 |
| 15387 | | -0.40798300 0.88129549 0.23847038 131.60415866 |
| 15388 | | Axis 0.94261684 0.21743354 -0.25336958 |
| 15389 | | Axis point 0.00000000 -65.93321594 137.95267859 |
| 15390 | | Rotation angle (degrees) 79.26718003 |
| 15391 | | Shift along axis 124.55141079 |
| 15392 | | |
| 15393 | | Average map value = 0.07769 for 3543 atoms, 1632 outside contour |
| 15394 | | |
| 15395 | | > view matrix models |
| 15396 | | > #4,0.97949,-0.16271,-0.11888,100.04,-0.19657,-0.90129,-0.38605,127.57,-0.044334,0.4015,-0.91479,154.32 |
| 15397 | | |
| 15398 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15399 | | |
| 15400 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15401 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15402 | | correlation = 0.6048, correlation about mean = 0.04455, overlap = 367.4 |
| 15403 | | steps = 176, shift = 10.6, angle = 28 degrees |
| 15404 | | |
| 15405 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15406 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15407 | | Matrix rotation and translation |
| 15408 | | 0.89558723 0.23831553 -0.37567167 132.63885422 |
| 15409 | | -0.36043749 -0.10630447 -0.92670608 109.99568876 |
| 15410 | | -0.26078403 0.96535230 -0.00930707 130.87804867 |
| 15411 | | Axis 0.95180643 -0.05779462 -0.30120475 |
| 15412 | | Axis point 0.00000000 -13.93850765 140.35362062 |
| 15413 | | Rotation angle (degrees) 96.31601613 |
| 15414 | | Shift along axis 80.46826514 |
| 15415 | | |
| 15416 | | Average map value = 0.07815 for 3543 atoms, 1647 outside contour |
| 15417 | | |
| 15418 | | > ui mousemode right "translate selected atoms" |
| 15419 | | |
| 15420 | | Opened 2qe3-assembly1.cif map 5 as #5, grid size 54,54,54, pixel 1.67, shown |
| 15421 | | at level 0.105, step 1, values float32 |
| 15422 | | |
| 15423 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15424 | | |
| 15425 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15426 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15427 | | correlation = 0.6006, correlation about mean = 0.05935, overlap = 373 |
| 15428 | | steps = 116, shift = 7.7, angle = 15.8 degrees |
| 15429 | | |
| 15430 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15431 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15432 | | Matrix rotation and translation |
| 15433 | | 0.88477750 -0.00069151 -0.46601318 123.10878906 |
| 15434 | | -0.45471572 -0.22014148 -0.86300135 111.09322232 |
| 15435 | | -0.10199206 0.97546771 -0.19509066 128.12045951 |
| 15436 | | Axis 0.95337893 -0.18877123 -0.23544433 |
| 15437 | | Axis point 0.00000000 10.29674761 128.65865821 |
| 15438 | | Rotation angle (degrees) 105.38046067 |
| 15439 | | Shift along axis 66.23288580 |
| 15440 | | |
| 15441 | | Average map value = 0.07991 for 3543 atoms, 1632 outside contour |
| 15442 | | Opened 2qe3-assembly1.cif map 5 as #5, grid size 54,54,54, pixel 1.67, shown |
| 15443 | | at level 0.105, step 1, values float32 |
| 15444 | | |
| 15445 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15446 | | |
| 15447 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15448 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15449 | | correlation = 0.593, correlation about mean = 0.06355, overlap = 374.8 |
| 15450 | | steps = 84, shift = 6.58, angle = 6.52 degrees |
| 15451 | | |
| 15452 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15453 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15454 | | Matrix rotation and translation |
| 15455 | | 0.82997105 0.04073754 -0.55631690 117.94526225 |
| 15456 | | -0.53656347 -0.21430620 -0.81619390 114.95456763 |
| 15457 | | -0.15247190 0.97591664 -0.15600967 133.89853974 |
| 15458 | | Axis 0.93066488 -0.20972164 -0.29979946 |
| 15459 | | Axis point 0.00000000 10.67988657 136.64850555 |
| 15460 | | Rotation angle (degrees) 105.67452649 |
| 15461 | | Shift along axis 45.51634233 |
| 15462 | | |
| 15463 | | Average map value = 0.08065 for 3543 atoms, 1654 outside contour |
| 15464 | | Opened 2qe3-assembly1.cif map 5 as #5, grid size 54,54,54, pixel 1.67, shown |
| 15465 | | at level 0.105, step 1, values float32 |
| 15466 | | |
| 15467 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15468 | | |
| 15469 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15470 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15471 | | correlation = 0.6065, correlation about mean = 0.06982, overlap = 373.6 |
| 15472 | | steps = 128, shift = 8.58, angle = 9.12 degrees |
| 15473 | | |
| 15474 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15475 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15476 | | Matrix rotation and translation |
| 15477 | | 0.87860702 0.13953907 -0.45670400 111.54310451 |
| 15478 | | -0.43767344 -0.14726802 -0.88699159 111.89032941 |
| 15479 | | -0.19102787 0.97920425 -0.06831817 138.39259755 |
| 15480 | | Axis 0.94663150 -0.13476473 -0.29279218 |
| 15481 | | Axis point 0.00000000 -4.29960071 139.30251307 |
| 15482 | | Rotation angle (degrees) 99.70001189 |
| 15483 | | Shift along axis 49.99107608 |
| 15484 | | |
| 15485 | | Average map value = 0.08055 for 3543 atoms, 1683 outside contour |
| 15486 | | |
| 15487 | | > hide sel surfaces |
| 15488 | | |
| 15489 | | > show sel cartoons |
| 15490 | | |
| 15491 | | Opened 2qe3-assembly1.cif map 5 as #5, grid size 54,54,54, pixel 1.67, shown |
| 15492 | | at level 0.105, step 1, values float32 |
| 15493 | | |
| 15494 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15495 | | |
| 15496 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15497 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15498 | | correlation = 0.6065, correlation about mean = 0.06977, overlap = 373.6 |
| 15499 | | steps = 152, shift = 8.1, angle = 0.0021 degrees |
| 15500 | | |
| 15501 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15502 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15503 | | Matrix rotation and translation |
| 15504 | | 0.87859821 0.13955763 -0.45671528 104.07822453 |
| 15505 | | -0.43767783 -0.14729724 -0.88698457 112.79612374 |
| 15506 | | -0.19105837 0.97919721 -0.06833381 141.40203352 |
| 15507 | | Axis 0.94662878 -0.13475562 -0.29280518 |
| 15508 | | Axis point 0.00000000 -4.66509082 139.57104383 |
| 15509 | | Rotation angle (degrees) 99.70157206 |
| 15510 | | Shift along axis 41.92028325 |
| 15511 | | |
| 15512 | | Average map value = 0.08055 for 3543 atoms, 1681 outside contour |
| 15513 | | |
| 15514 | | > ui mousemode right "move picked models" |
| 15515 | | |
| 15516 | | > view matrix models |
| 15517 | | > #6,0.8207,-0.0015957,-0.57136,57.376,-0.56087,0.18846,-0.80617,307.23,0.10897,0.98208,0.15378,1.3854 |
| 15518 | | |
| 15519 | | > volume #6 style image |
| 15520 | | |
| 15521 | | > volume #6 style mesh |
| 15522 | | |
| 15523 | | > volume #6 color #cececee0 |
| 15524 | | |
| 15525 | | > view matrix models |
| 15526 | | > #6,0.8207,-0.0015957,-0.57136,47.125,-0.56087,0.18846,-0.80617,304.43,0.10897,0.98208,0.15378,5.8261 |
| 15527 | | |
| 15528 | | > view matrix models |
| 15529 | | > #6,0.8207,-0.0015957,-0.57136,49.635,-0.56087,0.18846,-0.80617,305.53,0.10897,0.98208,0.15378,4.4497 |
| 15530 | | |
| 15531 | | > view matrix models |
| 15532 | | > #6,0.8207,-0.0015957,-0.57136,50.109,-0.56087,0.18846,-0.80617,305.85,0.10897,0.98208,0.15378,4.108 |
| 15533 | | |
| 15534 | | > select subtract #1 |
| 15535 | | |
| 15536 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 15537 | | |
| 15538 | | > select subtract #4 |
| 15539 | | |
| 15540 | | 3 models selected |
| 15541 | | |
| 15542 | | > view matrix models |
| 15543 | | > #6,0.8207,-0.0015957,-0.57136,48.502,-0.56087,0.18846,-0.80617,307.27,0.10897,0.98208,0.15378,3.4991 |
| 15544 | | |
| 15545 | | > ui mousemode right "rotate selected models" |
| 15546 | | |
| 15547 | | > ui mousemode right translate |
| 15548 | | |
| 15549 | | > ui mousemode right "rotate selected models" |
| 15550 | | |
| 15551 | | > select add #4 |
| 15552 | | |
| 15553 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 15554 | | |
| 15555 | | > view matrix models |
| 15556 | | > #4,0.95982,0.20093,0.19591,73.617,0.1971,-0.97961,0.039049,128.07,0.19976,0.0011332,-0.97985,135.53 |
| 15557 | | |
| 15558 | | > view matrix models |
| 15559 | | > #4,0.55724,0.62881,0.54229,95.933,0.63723,-0.74257,0.20625,122.2,0.53238,0.23063,-0.81448,132.42 |
| 15560 | | |
| 15561 | | > view matrix models |
| 15562 | | > #4,-0.0046677,0.70125,0.7129,115.1,0.77477,-0.44818,0.44594,126.48,0.63222,0.55441,-0.54122,138.7 |
| 15563 | | |
| 15564 | | > ui mousemode right "translate selected models" |
| 15565 | | |
| 15566 | | > view matrix models |
| 15567 | | > #4,-0.0046677,0.70125,0.7129,113.88,0.77477,-0.44818,0.44594,132.21,0.63222,0.55441,-0.54122,147 |
| 15568 | | |
| 15569 | | > view matrix models |
| 15570 | | > #4,-0.0046677,0.70125,0.7129,113.84,0.77477,-0.44818,0.44594,131.61,0.63222,0.55441,-0.54122,147.51 |
| 15571 | | |
| 15572 | | > view matrix models |
| 15573 | | > #4,-0.0046677,0.70125,0.7129,114.63,0.77477,-0.44818,0.44594,140.47,0.63222,0.55441,-0.54122,138.4 |
| 15574 | | |
| 15575 | | > view matrix models |
| 15576 | | > #4,-0.0046677,0.70125,0.7129,113.94,0.77477,-0.44818,0.44594,133.56,0.63222,0.55441,-0.54122,146.09 |
| 15577 | | |
| 15578 | | > ui mousemode right "rotate selected models" |
| 15579 | | |
| 15580 | | > view matrix models |
| 15581 | | > #4,0.086984,-0.55409,0.8279,99.594,0.56393,-0.65769,-0.49943,118.5,0.82123,0.51032,0.25526,155.99 |
| 15582 | | |
| 15583 | | > view matrix models |
| 15584 | | > #4,0.38638,-0.0023402,0.92234,99.622,0.70065,-0.64959,-0.29516,118.9,0.59983,0.76028,-0.24935,154.94 |
| 15585 | | |
| 15586 | | > view matrix models |
| 15587 | | > #4,0.97946,-0.11642,0.16464,67.754,0.032933,-0.71315,-0.70024,128.19,0.19893,0.69128,-0.69466,156.25 |
| 15588 | | |
| 15589 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15590 | | |
| 15591 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15592 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15593 | | correlation = 0.6071, correlation about mean = 0.05283, overlap = 390.2 |
| 15594 | | steps = 112, shift = 10, angle = 7.98 degrees |
| 15595 | | |
| 15596 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15597 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15598 | | Matrix rotation and translation |
| 15599 | | 0.79676889 0.46736903 0.38304767 123.94690901 |
| 15600 | | 0.16648176 0.43957939 -0.88264023 110.70548985 |
| 15601 | | -0.58089857 0.76703073 0.27243477 158.72171078 |
| 15602 | | Axis 0.85289459 0.49836880 -0.15556141 |
| 15603 | | Axis point 0.00000000 -117.66031137 123.23196979 |
| 15604 | | Rotation angle (degrees) 75.26246674 |
| 15605 | | Shift along axis 136.19483844 |
| 15606 | | |
| 15607 | | Average map value = 0.08296 for 3543 atoms, 1635 outside contour |
| 15608 | | |
| 15609 | | > view matrix models |
| 15610 | | > #4,0.95529,-0.22914,0.18685,58.734,-0.064404,-0.77805,-0.62489,133.55,0.28857,0.58492,-0.75803,147.03 |
| 15611 | | |
| 15612 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15613 | | |
| 15614 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15615 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15616 | | correlation = 0.6164, correlation about mean = 0.05334, overlap = 378.3 |
| 15617 | | steps = 92, shift = 6.18, angle = 6.99 degrees |
| 15618 | | |
| 15619 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15620 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15621 | | Matrix rotation and translation |
| 15622 | | 0.86078123 0.36622668 0.35345960 114.35372876 |
| 15623 | | 0.15689953 0.46970518 -0.86876900 111.10007624 |
| 15624 | | -0.48418819 0.80327770 0.34685261 157.89875048 |
| 15625 | | Axis 0.88853072 0.44512860 -0.11123709 |
| 15626 | | Axis point 0.00000000 -111.39938279 127.48097047 |
| 15627 | | Rotation angle (degrees) 70.20416604 |
| 15628 | | Shift along axis 133.49642539 |
| 15629 | | |
| 15630 | | Average map value = 0.08108 for 3543 atoms, 1613 outside contour |
| 15631 | | |
| 15632 | | > view matrix models |
| 15633 | | > #4,-0.22372,0.43141,0.87398,106.06,0.92853,-0.17824,0.32567,135.61,0.29627,0.88437,-0.3607,156.76 |
| 15634 | | |
| 15635 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15636 | | |
| 15637 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15638 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15639 | | correlation = 0.6278, correlation about mean = 0.06567, overlap = 386 |
| 15640 | | steps = 84, shift = 3.76, angle = 10.2 degrees |
| 15641 | | |
| 15642 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15643 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15644 | | Matrix rotation and translation |
| 15645 | | -0.74094435 0.39991030 0.53951201 160.00642466 |
| 15646 | | 0.37361712 0.91302971 -0.16366732 124.90468595 |
| 15647 | | -0.55804274 0.08030255 -0.82591754 125.51909672 |
| 15648 | | Axis 0.21692947 0.97590728 -0.02337897 |
| 15649 | | Axis point 86.48186733 0.00000000 44.27975849 |
| 15650 | | Rotation angle (degrees) 145.78323767 |
| 15651 | | Shift along axis 153.67099429 |
| 15652 | | |
| 15653 | | Average map value = 0.08204 for 3543 atoms, 1587 outside contour |
| 15654 | | |
| 15655 | | > ui mousemode right "move picked models" |
| 15656 | | |
| 15657 | | > view matrix models |
| 15658 | | > #6,0.8207,-0.0015957,-0.57136,49.254,-0.56087,0.18846,-0.80617,302.85,0.10897,0.98208,0.15378,-1.3489 |
| 15659 | | |
| 15660 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15661 | | |
| 15662 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15663 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15664 | | correlation = 0.6261, correlation about mean = 0.07598, overlap = 384 |
| 15665 | | steps = 136, shift = 6.56, angle = 25 degrees |
| 15666 | | |
| 15667 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15668 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15669 | | Matrix rotation and translation |
| 15670 | | -0.78190886 0.24997127 0.57108046 160.59281845 |
| 15671 | | 0.45791121 0.85192176 0.25406029 131.44363101 |
| 15672 | | -0.42300810 0.46015614 -0.78058982 128.51916328 |
| 15673 | | Axis 0.19887580 0.95926319 0.20065529 |
| 15674 | | Axis point 80.01046705 0.00000000 32.45588168 |
| 15675 | | Rotation angle (degrees) 148.79161723 |
| 15676 | | Shift along axis 183.81511267 |
| 15677 | | |
| 15678 | | Average map value = 0.08125 for 3543 atoms, 1646 outside contour |
| 15679 | | |
| 15680 | | > ui mousemode right "translate selected models" |
| 15681 | | |
| 15682 | | > view matrix models |
| 15683 | | > #4,-0.40075,-0.059122,0.91428,107.02,0.86587,-0.35061,0.35686,134.8,0.29946,0.93465,0.1917,167.93 |
| 15684 | | |
| 15685 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 15686 | | |
| 15687 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 15688 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 15689 | | correlation = 0.6261, correlation about mean = 0.07597, overlap = 384 |
| 15690 | | steps = 84, shift = 3.06, angle = 0.021 degrees |
| 15691 | | |
| 15692 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 15693 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 15694 | | Matrix rotation and translation |
| 15695 | | -0.78184071 0.25032644 0.57101818 160.59597877 |
| 15696 | | 0.45816390 0.85183777 0.25388628 131.44653677 |
| 15697 | | -0.42286041 0.46011855 -0.78069199 128.52060011 |
| 15698 | | Axis 0.19904487 0.95924092 0.20059412 |
| 15699 | | Axis point 79.99848338 0.00000000 32.46836211 |
| 15700 | | Rotation angle (degrees) 148.79814274 |
| 15701 | | Shift along axis 183.83517874 |
| 15702 | | |
| 15703 | | Average map value = 0.08125 for 3543 atoms, 1646 outside contour |
| 15704 | | |
| 15705 | | > select add #3 |
| 15706 | | |
| 15707 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 15708 | | |
| 15709 | | > select subtract #4 |
| 15710 | | |
| 15711 | | 5 models selected |
| 15712 | | |
| 15713 | | > view matrix models #3,1,0,0,8.3169,0,1,0,8.65,0,0,1,-22.918 |
| 15714 | | |
| 15715 | | > view matrix models #3,1,0,0,14.411,0,1,0,13.1,0,0,1,-24.308 |
| 15716 | | |
| 15717 | | > view matrix models #3,1,0,0,20.381,0,1,0,16.857,0,0,1,-26.182 |
| 15718 | | |
| 15719 | | > view matrix models #3,1,0,0,24.9,0,1,0,14.758,0,0,1,-29.587 |
| 15720 | | |
| 15721 | | > select subtract #3 |
| 15722 | | |
| 15723 | | Nothing selected |
| 15724 | | |
| 15725 | | > select add #1 |
| 15726 | | |
| 15727 | | 2 models selected |
| 15728 | | |
| 15729 | | > select subtract #1 |
| 15730 | | |
| 15731 | | Nothing selected |
| 15732 | | |
| 15733 | | > select add #2 |
| 15734 | | |
| 15735 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 15736 | | |
| 15737 | | > select subtract #2 |
| 15738 | | |
| 15739 | | 3 models selected |
| 15740 | | |
| 15741 | | > select add #2 |
| 15742 | | |
| 15743 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 15744 | | |
| 15745 | | > select subtract #2 |
| 15746 | | |
| 15747 | | 3 models selected |
| 15748 | | |
| 15749 | | Cell requested for row 1 is out of bounds for table with 9 rows! Resizing |
| 15750 | | table model. |
| 15751 | | |
| 15752 | | > select add #6 |
| 15753 | | |
| 15754 | | 3 models selected |
| 15755 | | |
| 15756 | | > view matrix models |
| 15757 | | > #6,0.8207,-0.0015957,-0.57136,44.867,-0.56087,0.18846,-0.80617,308.03,0.10897,0.98208,0.15378,3.0439 |
| 15758 | | |
| 15759 | | > select add #6 |
| 15760 | | |
| 15761 | | 3 models selected |
| 15762 | | |
| 15763 | | > select add #6 |
| 15764 | | |
| 15765 | | 3 models selected |
| 15766 | | |
| 15767 | | > select add #6 |
| 15768 | | |
| 15769 | | 3 models selected |
| 15770 | | |
| 15771 | | > hide #!6 models |
| 15772 | | |
| 15773 | | > view matrix models |
| 15774 | | > #6,0.8207,-0.0015957,-0.57136,45.264,-0.56087,0.18846,-0.80617,306.99,0.10897,0.98208,0.15378,2.45 |
| 15775 | | |
| 15776 | | > select add #4 |
| 15777 | | |
| 15778 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 15779 | | |
| 15780 | | > view matrix models |
| 15781 | | > #4,-0.40078,-0.058809,0.91428,125.47,0.86576,-0.35079,0.35695,122.47,0.29973,0.9346,0.19151,150.34,#6,0.8207,-0.0015957,-0.57136,63.32,-0.56087,0.18846,-0.80617,295.53,0.10897,0.98208,0.15378,-12.217 |
| 15782 | | |
| 15783 | | > view matrix models |
| 15784 | | > #4,-0.40078,-0.058809,0.91428,125.5,0.86576,-0.35079,0.35695,122.25,0.29973,0.9346,0.19151,150.24,#6,0.8207,-0.0015957,-0.57136,63.347,-0.56087,0.18846,-0.80617,295.31,0.10897,0.98208,0.15378,-12.31 |
| 15785 | | |
| 15786 | | > view matrix models |
| 15787 | | > #4,-0.40078,-0.058809,0.91428,127.31,0.86576,-0.35079,0.35695,119.08,0.29973,0.9346,0.19151,148.07,#6,0.8207,-0.0015957,-0.57136,65.163,-0.56087,0.18846,-0.80617,292.14,0.10897,0.98208,0.15378,-14.482 |
| 15788 | | |
| 15789 | | > select add #6 |
| 15790 | | |
| 15791 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15792 | | |
| 15793 | | > select add #6 |
| 15794 | | |
| 15795 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15796 | | |
| 15797 | | > show #!6 models |
| 15798 | | |
| 15799 | | > hide #!6 models |
| 15800 | | |
| 15801 | | > view matrix models |
| 15802 | | > #4,-0.40078,-0.058809,0.91428,128.67,0.86576,-0.35079,0.35695,115.9,0.29973,0.9346,0.19151,146.9,#6,0.8207,-0.0015957,-0.57136,66.521,-0.56087,0.18846,-0.80617,288.95,0.10897,0.98208,0.15378,-15.652 |
| 15803 | | |
| 15804 | | > ui mousemode right "rotate selected models" |
| 15805 | | |
| 15806 | | > view matrix models |
| 15807 | | > #4,0.00053663,-0.093263,0.99564,119.12,0.49187,-0.86685,-0.081464,111.59,0.87067,0.48977,0.045409,123.78,#6,0.54476,0.17358,-0.82043,112.61,-0.64808,-0.53374,-0.54325,356.85,-0.53219,0.82764,-0.17827,129.95 |
| 15808 | | |
| 15809 | | > select add #6 |
| 15810 | | |
| 15811 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15812 | | |
| 15813 | | > select subtract #4 |
| 15814 | | |
| 15815 | | 6 models selected |
| 15816 | | |
| 15817 | | > show #!6 models |
| 15818 | | |
| 15819 | | > select add #6 |
| 15820 | | |
| 15821 | | 3 models selected |
| 15822 | | |
| 15823 | | > select add #6 |
| 15824 | | |
| 15825 | | 3 models selected |
| 15826 | | |
| 15827 | | > select add #6 |
| 15828 | | |
| 15829 | | 3 models selected |
| 15830 | | |
| 15831 | | > select add #6 |
| 15832 | | |
| 15833 | | 3 models selected |
| 15834 | | |
| 15835 | | > hide #!6 models |
| 15836 | | |
| 15837 | | > select add #2 |
| 15838 | | |
| 15839 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 11 models selected |
| 15840 | | |
| 15841 | | > show #!2 models |
| 15842 | | |
| 15843 | | > select subtract #2 |
| 15844 | | |
| 15845 | | 6 models selected |
| 15846 | | |
| 15847 | | > hide #!2 models |
| 15848 | | |
| 15849 | | > select add #6 |
| 15850 | | |
| 15851 | | 3 models selected |
| 15852 | | |
| 15853 | | > select add #6 |
| 15854 | | |
| 15855 | | 3 models selected |
| 15856 | | |
| 15857 | | > select add #6 |
| 15858 | | |
| 15859 | | 3 models selected |
| 15860 | | |
| 15861 | | > select add #6 |
| 15862 | | |
| 15863 | | 3 models selected |
| 15864 | | |
| 15865 | | > select add #6 |
| 15866 | | |
| 15867 | | 3 models selected |
| 15868 | | |
| 15869 | | > view #6 clip false |
| 15870 | | |
| 15871 | | > view matrix models |
| 15872 | | > #6,0.70977,-0.68176,-0.17728,90.92,-0.47329,-0.27513,-0.83684,351.77,0.52175,0.67787,-0.51795,73.043 |
| 15873 | | |
| 15874 | | > view matrix models |
| 15875 | | > #6,0.68047,-0.70784,-0.18955,99.022,-0.52559,-0.29121,-0.79935,354.09,0.51061,0.64355,-0.57019,85.851 |
| 15876 | | |
| 15877 | | > view matrix models |
| 15878 | | > #6,0.72083,-0.64852,-0.2446,95.999,-0.54656,-0.31483,-0.77599,355.66,0.42624,0.69304,-0.58139,92.022 |
| 15879 | | |
| 15880 | | > view matrix models |
| 15881 | | > #6,0.68731,-0.72595,0.024586,68.387,-0.25339,-0.27134,-0.92853,339.17,0.68074,0.63196,-0.37044,37.479 |
| 15882 | | |
| 15883 | | > ui mousemode right rotate |
| 15884 | | |
| 15885 | | > hide #!4 models |
| 15886 | | |
| 15887 | | > show #!4 models |
| 15888 | | |
| 15889 | | > hide #!6 models |
| 15890 | | |
| 15891 | | > hide #!4 models |
| 15892 | | |
| 15893 | | > show #!6 models |
| 15894 | | |
| 15895 | | > select add #6 |
| 15896 | | |
| 15897 | | 3 models selected |
| 15898 | | |
| 15899 | | > select add #6 |
| 15900 | | |
| 15901 | | 3 models selected |
| 15902 | | |
| 15903 | | > select add #6 |
| 15904 | | |
| 15905 | | 3 models selected |
| 15906 | | |
| 15907 | | > select add #6 |
| 15908 | | |
| 15909 | | 3 models selected |
| 15910 | | |
| 15911 | | > select add #6 |
| 15912 | | |
| 15913 | | 3 models selected |
| 15914 | | |
| 15915 | | > select add #6 |
| 15916 | | |
| 15917 | | 3 models selected |
| 15918 | | |
| 15919 | | > select add #6 |
| 15920 | | |
| 15921 | | 3 models selected |
| 15922 | | |
| 15923 | | > select add #6 |
| 15924 | | |
| 15925 | | 3 models selected |
| 15926 | | |
| 15927 | | > select add #6 |
| 15928 | | |
| 15929 | | 3 models selected |
| 15930 | | |
| 15931 | | > select add #6 |
| 15932 | | |
| 15933 | | 3 models selected |
| 15934 | | |
| 15935 | | > select add #6 |
| 15936 | | |
| 15937 | | 3 models selected |
| 15938 | | |
| 15939 | | > volume #6 style surface |
| 15940 | | |
| 15941 | | > show #!4 models |
| 15942 | | |
| 15943 | | > select add #4 |
| 15944 | | |
| 15945 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 15946 | | |
| 15947 | | > hide #!6 models |
| 15948 | | |
| 15949 | | > ui mousemode right translate |
| 15950 | | |
| 15951 | | > select add #6 |
| 15952 | | |
| 15953 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15954 | | |
| 15955 | | > select add #6 |
| 15956 | | |
| 15957 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15958 | | |
| 15959 | | > select add #6 |
| 15960 | | |
| 15961 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15962 | | |
| 15963 | | > select add #6 |
| 15964 | | |
| 15965 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15966 | | |
| 15967 | | > select add #6 |
| 15968 | | |
| 15969 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15970 | | |
| 15971 | | > select add #6 |
| 15972 | | |
| 15973 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15974 | | |
| 15975 | | > select add #6 |
| 15976 | | |
| 15977 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15978 | | |
| 15979 | | > select add #6 |
| 15980 | | |
| 15981 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15982 | | |
| 15983 | | > select add #6 |
| 15984 | | |
| 15985 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15986 | | |
| 15987 | | > show #!6 models |
| 15988 | | |
| 15989 | | > select add #6 |
| 15990 | | |
| 15991 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15992 | | |
| 15993 | | > select add #6 |
| 15994 | | |
| 15995 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 15996 | | |
| 15997 | | > select add #6 |
| 15998 | | |
| 15999 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 9 models selected |
| 16000 | | |
| 16001 | | > ui mousemode right "translate selected models" |
| 16002 | | |
| 16003 | | > view matrix models |
| 16004 | | > #4,0.00053663,-0.093263,0.99564,116.94,0.49187,-0.86685,-0.081464,111.31,0.87067,0.48977,0.045409,124.81,#6,0.68731,-0.72595,0.024586,66.207,-0.25339,-0.27134,-0.92853,338.89,0.68074,0.63196,-0.37044,38.517 |
| 16005 | | |
| 16006 | | > hide #!6 models |
| 16007 | | |
| 16008 | | > view matrix models |
| 16009 | | > #4,0.00053663,-0.093263,0.99564,93.885,0.49187,-0.86685,-0.081464,116.98,0.87067,0.48977,0.045409,138.67,#6,0.68731,-0.72595,0.024586,43.153,-0.25339,-0.27134,-0.92853,344.57,0.68074,0.63196,-0.37044,52.369 |
| 16010 | | |
| 16011 | | > show #!6 models |
| 16012 | | |
| 16013 | | > select subtract #4 |
| 16014 | | |
| 16015 | | 6 models selected |
| 16016 | | |
| 16017 | | > select add #6 |
| 16018 | | |
| 16019 | | 3 models selected |
| 16020 | | |
| 16021 | | > volume #6 style image colorMode opaque8 showOutlineBox true imageMode "box |
| 16022 | | > faces" |
| 16023 | | |
| 16024 | | > volume #6 region 0,0,149,299,299,149 step 1 colorMode auto8 imageMode "full |
| 16025 | | > region" |
| 16026 | | |
| 16027 | | > volume #6 region 0,0,0,299,299,299 step 1 |
| 16028 | | |
| 16029 | | > volume #6 region 0,0,0,299,299,299 step 1 imageMode "tilted slab" |
| 16030 | | > tiltedSlabAxis -0.9548,-0.2943,0.04093 tiltedSlabOffset -176.7 |
| 16031 | | > tiltedSlabSpacing 0.839 tiltedSlabPlaneCount 60 |
| 16032 | | |
| 16033 | | > volume #6 tiltedSlabAxis -0.9794,-0.1459,0.1397 tiltedSlabOffset -150.5 |
| 16034 | | |
| 16035 | | > volume #6 style surface |
| 16036 | | |
| 16037 | | > select add #6 |
| 16038 | | |
| 16039 | | 3 models selected |
| 16040 | | |
| 16041 | | > select add #6 |
| 16042 | | |
| 16043 | | 3 models selected |
| 16044 | | |
| 16045 | | > select add #2 |
| 16046 | | |
| 16047 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 11 models selected |
| 16048 | | |
| 16049 | | > hide #!6 target m |
| 16050 | | |
| 16051 | | > show #!3 target m |
| 16052 | | |
| 16053 | | > hide #!4 target m |
| 16054 | | |
| 16055 | | > show #!4 target m |
| 16056 | | |
| 16057 | | > hide #!3 target m |
| 16058 | | |
| 16059 | | > show #!5 target m |
| 16060 | | |
| 16061 | | > hide #!4 target m |
| 16062 | | |
| 16063 | | > show #!6 target m |
| 16064 | | |
| 16065 | | > hide #!5 target m |
| 16066 | | |
| 16067 | | > show #!4 models |
| 16068 | | |
| 16069 | | > select subtract #2 |
| 16070 | | |
| 16071 | | 6 models selected |
| 16072 | | |
| 16073 | | > select add #6 |
| 16074 | | |
| 16075 | | 3 models selected |
| 16076 | | |
| 16077 | | > volume #6 tiltedSlabAxis -0.9017,0.4083,-0.1421 tiltedSlabOffset -134.7 |
| 16078 | | |
| 16079 | | > ui mousemode right "translate selected models" |
| 16080 | | |
| 16081 | | > view matrix models |
| 16082 | | > #6,0.68731,-0.72595,0.024586,66.238,-0.25339,-0.27134,-0.92853,331.31,0.68074,0.63196,-0.37044,35.972 |
| 16083 | | |
| 16084 | | > view matrix models |
| 16085 | | > #6,0.68731,-0.72595,0.024586,72.41,-0.25339,-0.27134,-0.92853,337.31,0.68074,0.63196,-0.37044,34.771 |
| 16086 | | |
| 16087 | | > fitmap #4 inMap #6 resolution 5 metric correlation |
| 16088 | | |
| 16089 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16090 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip using 13679 points |
| 16091 | | correlation = 0.6159, correlation about mean = 0.07574, overlap = 369 |
| 16092 | | steps = 108, shift = 3.84, angle = 3.14 degrees |
| 16093 | | |
| 16094 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 16095 | | cryosparc_P1050_J339_004_volume_map_sharp.mrc z flip (#6) coordinates: |
| 16096 | | Matrix rotation and translation |
| 16097 | | 0.49841102 0.48573119 0.71808889 138.79212765 |
| 16098 | | 0.43742069 0.57424057 -0.69203388 106.01696698 |
| 16099 | | -0.74849822 0.65902426 0.07373896 163.41789708 |
| 16100 | | Axis 0.67734597 0.73526582 -0.02422022 |
| 16101 | | Axis point 143.12415931 0.00000000 65.16390347 |
| 16102 | | Rotation angle (degrees) 85.80246575 |
| 16103 | | Shift along axis 168.00292314 |
| 16104 | | |
| 16105 | | Average map value = 0.07912 for 3543 atoms, 1661 outside contour |
| 16106 | | |
| 16107 | | > select add #4 |
| 16108 | | |
| 16109 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 16110 | | |
| 16111 | | > view matrix models |
| 16112 | | > #4,0.0066131,-0.066821,0.99774,95.714,0.45002,-0.89082,-0.062643,115.98,0.89299,0.44942,0.02418,133.38,#6,0.68731,-0.72595,0.024586,73.266,-0.25339,-0.27134,-0.92853,331.66,0.68074,0.63196,-0.37044,32.443 |
| 16113 | | |
| 16114 | | > ui mousemode right translate |
| 16115 | | |
| 16116 | | > ui mousemode right rotate |
| 16117 | | |
| 16118 | | > close #6 |
| 16119 | | |
| 16120 | | > show #!1 models |
| 16121 | | |
| 16122 | | > select add #1 |
| 16123 | | |
| 16124 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 16125 | | |
| 16126 | | > hide #!1 models |
| 16127 | | |
| 16128 | | > select subtract #1 |
| 16129 | | |
| 16130 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 16131 | | |
| 16132 | | > select subtract #4 |
| 16133 | | |
| 16134 | | 3 models selected |
| 16135 | | |
| 16136 | | > ui mousemode right "move picked models" |
| 16137 | | |
| 16138 | | > open /Users/mansoore.esmaili/Downloads/J59.volume_class_0.map_sharp.json |
| 16139 | | |
| 16140 | | Opening an AlphaFold PAE file requires first opening the predicted atomic |
| 16141 | | model. Did not find an open atomic model from the same directory. If the |
| 16142 | | atomic model is already open choose it using menu |
| 16143 | | |
| 16144 | | Tools / Structure Prediction / AlphaFold Error Plot |
| 16145 | | |
| 16146 | | or use the open command structure option, for example |
| 16147 | | |
| 16148 | | open /Users/mansoore.esmaili/Downloads/J59.volume_class_0.map_sharp.json |
| 16149 | | structure #1 |
| 16150 | | |
| 16151 | | If you are trying to open a JSON file that is not AlphaFold PAE data then you |
| 16152 | | need to specify the specific JSON format such as |
| 16153 | | |
| 16154 | | open mole_channels.json format mole |
| 16155 | | |
| 16156 | | > open |
| 16157 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc |
| 16158 | | |
| 16159 | | Opened cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc as #6, grid size |
| 16160 | | 128,128,128, pixel 1.97, shown at level 0.159, step 1, values float32 |
| 16161 | | |
| 16162 | | > select add #4 |
| 16163 | | |
| 16164 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 16165 | | |
| 16166 | | > view matrix models |
| 16167 | | > #4,0.0066131,-0.066821,0.99774,144.3,0.45002,-0.89082,-0.062643,103.61,0.89299,0.44942,0.02418,132.92 |
| 16168 | | |
| 16169 | | > fitmap #6 inMap #5 metric correlation |
| 16170 | | |
| 16171 | | Fit map cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc in map |
| 16172 | | 2qe3-assembly1.cif map 5 using 20964 points |
| 16173 | | correlation = 0.6524, correlation about mean = 0.4079, overlap = 1203 |
| 16174 | | steps = 396, shift = 52.7, angle = 55.2 degrees |
| 16175 | | |
| 16176 | | Position of cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#6) relative |
| 16177 | | to 2qe3-assembly1.cif map 5 (#5) coordinates: |
| 16178 | | Matrix rotation and translation |
| 16179 | | 0.06568109 0.37283305 0.92557092 -151.10310807 |
| 16180 | | 0.77440698 -0.60400277 0.18834677 -57.00321334 |
| 16181 | | 0.62926929 0.70439775 -0.32839607 -144.45931251 |
| 16182 | | Axis 0.71884489 0.41274006 0.55938150 |
| 16183 | | Axis point 0.00000000 18.14975412 -9.44864141 |
| 16184 | | Rotation angle (degrees) 158.96460600 |
| 16185 | | Shift along axis -212.95507413 |
| 16186 | | |
| 16187 | | |
| 16188 | | > select subtract #4 |
| 16189 | | |
| 16190 | | 3 models selected |
| 16191 | | |
| 16192 | | > show #!5 models |
| 16193 | | |
| 16194 | | > hide #!5 models |
| 16195 | | |
| 16196 | | > show target m |
| 16197 | | |
| 16198 | | > hide target m |
| 16199 | | |
| 16200 | | > show #!4 models |
| 16201 | | |
| 16202 | | > view matrix models |
| 16203 | | > #4,0.0066131,-0.066821,0.99774,88.823,0.45002,-0.89082,-0.062643,130.88,0.89299,0.44942,0.02418,173.19 |
| 16204 | | |
| 16205 | | > hide #!4 models |
| 16206 | | |
| 16207 | | > show #!5 models |
| 16208 | | |
| 16209 | | > select add #5 |
| 16210 | | |
| 16211 | | 2 models selected |
| 16212 | | |
| 16213 | | > volume #5 style image |
| 16214 | | |
| 16215 | | > fitmap #6 inMap #5 metric correlation |
| 16216 | | |
| 16217 | | Fit map cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc in map |
| 16218 | | 2qe3-assembly1.cif map 5 using 20964 points |
| 16219 | | correlation = 0.6524, correlation about mean = 0.4078, overlap = 1203 |
| 16220 | | steps = 48, shift = 0.0316, angle = 0.0727 degrees |
| 16221 | | |
| 16222 | | Position of cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#6) relative |
| 16223 | | to 2qe3-assembly1.cif map 5 (#5) coordinates: |
| 16224 | | Matrix rotation and translation |
| 16225 | | 0.06505178 0.37378222 0.92523247 -151.11512988 |
| 16226 | | 0.77476166 -0.60326816 0.18924032 -57.27623559 |
| 16227 | | 0.62889796 0.70452423 -0.32883580 -144.38932694 |
| 16228 | | Axis 0.71864755 0.41328687 0.55923131 |
| 16229 | | Axis point -0.00000000 18.07337194 -9.42959610 |
| 16230 | | Rotation angle (degrees) 158.99131427 |
| 16231 | | Shift along axis -213.01706686 |
| 16232 | | |
| 16233 | | |
| 16234 | | > show #!6 models |
| 16235 | | |
| 16236 | | > hide #!6 models |
| 16237 | | |
| 16238 | | > hide #!5 models |
| 16239 | | |
| 16240 | | > close #5 |
| 16241 | | |
| 16242 | | > show #4.2 models |
| 16243 | | |
| 16244 | | > show #4.3 models |
| 16245 | | |
| 16246 | | > hide #4.3 models |
| 16247 | | |
| 16248 | | > show #!6 models |
| 16249 | | |
| 16250 | | > close #1 |
| 16251 | | |
| 16252 | | > close #3 |
| 16253 | | |
| 16254 | | > close #6 |
| 16255 | | |
| 16256 | | > hide #4.2 models |
| 16257 | | |
| 16258 | | > show #!4.1 models |
| 16259 | | |
| 16260 | | > hide #!4.1 models |
| 16261 | | |
| 16262 | | > show #4.2 models |
| 16263 | | |
| 16264 | | > show #4.3 models |
| 16265 | | |
| 16266 | | > show #4.4 models |
| 16267 | | |
| 16268 | | > open |
| 16269 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc |
| 16270 | | |
| 16271 | | Opened cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc as #1, grid size |
| 16272 | | 128,128,128, pixel 1.97, shown at level 0.159, step 1, values float32 |
| 16273 | | Opened 2qe3-assembly1.cif map 5 as #3, grid size 54,54,54, pixel 1.67, shown |
| 16274 | | at level 0.105, step 1, values float32 |
| 16275 | | Opened 2qe3-assembly1.cif map 5 as #5, grid size 54,54,54, pixel 1.67, shown |
| 16276 | | at level 0.105, step 1, values float32 |
| 16277 | | |
| 16278 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16279 | | |
| 16280 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16281 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16282 | | correlation = -0.1474, correlation about mean = 0.04851, overlap = -12.88 |
| 16283 | | steps = 128, shift = 25, angle = 40.2 degrees |
| 16284 | | |
| 16285 | | Position of 2qe3-assembly1.cif map 5 (#5) relative to |
| 16286 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16287 | | Matrix rotation and translation |
| 16288 | | 0.33724332 -0.50172964 0.79657661 66.03352595 |
| 16289 | | 0.64979536 -0.48820402 -0.58260005 140.19817539 |
| 16290 | | 0.68119962 0.71408976 0.16137805 170.70647055 |
| 16291 | | Axis 0.74607145 0.06638402 0.66254853 |
| 16292 | | Axis point 0.00000000 44.96728684 106.21569735 |
| 16293 | | Rotation angle (degrees) 119.65599097 |
| 16294 | | Shift along axis 171.67396780 |
| 16295 | | |
| 16296 | | Average map value = -0.002546 for 3543 atoms, 3543 outside contour |
| 16297 | | |
| 16298 | | > view matrix models #1,1,0,0,-27.695,0,1,0,2.5142,0,0,1,17.696 |
| 16299 | | |
| 16300 | | > select add #1 |
| 16301 | | |
| 16302 | | 2 models selected |
| 16303 | | |
| 16304 | | > view matrix models #1,1,0,0,-51.881,0,1,0,1.9791,0,0,1,32.354 |
| 16305 | | |
| 16306 | | > select subtract #1 |
| 16307 | | |
| 16308 | | Nothing selected |
| 16309 | | |
| 16310 | | > select add #4 |
| 16311 | | |
| 16312 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 16313 | | |
| 16314 | | > view matrix models |
| 16315 | | > #4,0.33724,-0.50173,0.79658,144.37,0.6498,-0.4882,-0.5826,133.09,0.6812,0.71409,0.16138,178.81 |
| 16316 | | |
| 16317 | | > view matrix models |
| 16318 | | > #4,0.33724,-0.50173,0.79658,140.34,0.6498,-0.4882,-0.5826,132.79,0.6812,0.71409,0.16138,178.96 |
| 16319 | | |
| 16320 | | > ui mousemode right "rotate selected models" |
| 16321 | | |
| 16322 | | > view matrix models |
| 16323 | | > #4,0.56923,0.17341,0.80368,141.87,0.77513,-0.4391,-0.45426,132.48,0.27412,0.88154,-0.38437,181.15 |
| 16324 | | |
| 16325 | | > view matrix models |
| 16326 | | > #4,0.43018,0.89518,0.11658,140.37,0.80561,-0.3224,-0.49705,132.14,-0.40736,0.30773,-0.85986,183.71 |
| 16327 | | |
| 16328 | | > select subtract #4 |
| 16329 | | |
| 16330 | | 3 models selected |
| 16331 | | |
| 16332 | | > select add #4 |
| 16333 | | |
| 16334 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 16335 | | |
| 16336 | | > view matrix models |
| 16337 | | > #4,0.60387,0.025744,0.79667,139.14,0.73304,-0.41046,-0.54238,132.22,0.31304,0.91152,-0.26673,182.73 |
| 16338 | | |
| 16339 | | > view matrix models |
| 16340 | | > #4,0.66786,0.50117,0.55027,137.99,0.74395,-0.47197,-0.47306,132.58,0.022627,0.72531,-0.68805,180.23 |
| 16341 | | |
| 16342 | | > color #4 #d0e8ecff |
| 16343 | | |
| 16344 | | > view matrix models |
| 16345 | | > #4,0.19185,-0.61693,0.76328,142.29,0.44176,-0.6402,-0.62848,135.76,0.87638,0.45776,0.14971,170.62 |
| 16346 | | |
| 16347 | | > view matrix models |
| 16348 | | > #4,-0.33564,-0.72558,0.60074,152.03,0.78059,-0.5712,-0.25378,134.74,0.52728,0.38375,0.7581,190.95 |
| 16349 | | |
| 16350 | | > ui mousemode right rotate |
| 16351 | | |
| 16352 | | > ui mousemode right "rotate selected models" |
| 16353 | | |
| 16354 | | > view matrix models |
| 16355 | | > #4,-0.34602,-0.73001,0.58937,152.04,0.78114,-0.57211,-0.25002,134.78,0.5197,0.37387,0.7682,191.23 |
| 16356 | | |
| 16357 | | > view matrix models |
| 16358 | | > #4,-0.34602,-0.73001,0.58937,135.06,0.78114,-0.57211,-0.25002,151.52,0.5197,0.37387,0.7682,189.7 |
| 16359 | | |
| 16360 | | > view matrix models |
| 16361 | | > #4,-0.34602,-0.73001,0.58937,146.17,0.78114,-0.57211,-0.25002,148.71,0.5197,0.37387,0.7682,190.02 |
| 16362 | | |
| 16363 | | > ui mousemode right pivot |
| 16364 | | |
| 16365 | | > ui mousemode right "rotate selected models" |
| 16366 | | |
| 16367 | | > view matrix models |
| 16368 | | > #4,-0.35351,-0.7471,0.56291,145.67,0.80757,-0.54744,-0.21941,148.88,0.47208,0.37703,0.79686,191.89 |
| 16369 | | |
| 16370 | | > view matrix models |
| 16371 | | > #4,-0.36572,-0.7545,0.54495,145.56,0.79407,-0.55836,-0.24016,148.71,0.48548,0.3449,0.80334,191.3 |
| 16372 | | |
| 16373 | | > ui mousemode right select |
| 16374 | | |
| 16375 | | Drag select of 3 residues |
| 16376 | | |
| 16377 | | > ui mousemode right select |
| 16378 | | |
| 16379 | | > select add #4 |
| 16380 | | |
| 16381 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 5 models selected |
| 16382 | | Drag select of 8 residues |
| 16383 | | |
| 16384 | | > select add #4 |
| 16385 | | |
| 16386 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 5 models selected |
| 16387 | | |
| 16388 | | > ui mousemode right "rotate selected models" |
| 16389 | | |
| 16390 | | > ui mousemode right "move picked models" |
| 16391 | | |
| 16392 | | > view matrix models |
| 16393 | | > #4,-0.36572,-0.7545,0.54495,82.971,0.79407,-0.55836,-0.24016,91.118,0.48548,0.3449,0.80334,195.47 |
| 16394 | | |
| 16395 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16396 | | |
| 16397 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16398 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16399 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16400 | | steps = 140, shift = 21.8, angle = 53.5 degrees |
| 16401 | | |
| 16402 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16403 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16404 | | Matrix rotation and translation |
| 16405 | | -0.72371529 0.04711717 0.68848830 159.07576956 |
| 16406 | | 0.36916953 -0.81647777 0.44393456 115.41506535 |
| 16407 | | 0.58305234 0.57545113 0.57350323 137.53857599 |
| 16408 | | Axis 0.36180787 0.29005896 0.88598017 |
| 16409 | | Axis point 48.67925818 39.43662316 0.00000000 |
| 16410 | | Rotation angle (degrees) 169.52833830 |
| 16411 | | Shift along axis 212.88849003 |
| 16412 | | |
| 16413 | | Average map value = 0.385 for 3543 atoms, 607 outside contour |
| 16414 | | |
| 16415 | | > volume #1 color #b2b2b280 |
| 16416 | | |
| 16417 | | > volume #1 color #b2b2b25b |
| 16418 | | |
| 16419 | | > volume #1 color #b2b2b25c |
| 16420 | | |
| 16421 | | > view matrix models #1,1,0,0,-52.764,0,1,0,0.77746,0,0,1,32.453 |
| 16422 | | |
| 16423 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16424 | | |
| 16425 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16426 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16427 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16428 | | steps = 48, shift = 1.47, angle = 0.0453 degrees |
| 16429 | | |
| 16430 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16431 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16432 | | Matrix rotation and translation |
| 16433 | | -0.72381036 0.04698271 0.68839755 159.08685528 |
| 16434 | | 0.36874717 -0.81692058 0.44347073 115.42820340 |
| 16435 | | 0.58320158 0.57483336 0.57397084 137.53686550 |
| 16436 | | Axis 0.36176290 0.28970186 0.88611536 |
| 16437 | | Axis point 48.69134402 39.47096445 0.00000000 |
| 16438 | | Rotation angle (degrees) 169.53941882 |
| 16439 | | Shift along axis 212.86501654 |
| 16440 | | |
| 16441 | | Average map value = 0.385 for 3543 atoms, 606 outside contour |
| 16442 | | |
| 16443 | | > view matrix models #1,1,0,0,-50.743,0,1,0,2.6676,0,0,1,32.306 |
| 16444 | | |
| 16445 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16446 | | |
| 16447 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16448 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16449 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16450 | | steps = 64, shift = 2.75, angle = 0.0661 degrees |
| 16451 | | |
| 16452 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16453 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16454 | | Matrix rotation and translation |
| 16455 | | -0.72316198 0.04766669 0.68903166 159.06805063 |
| 16456 | | 0.36883428 -0.81680561 0.44361002 115.42975452 |
| 16457 | | 0.58395035 0.57494040 0.57310165 137.50131489 |
| 16458 | | Axis 0.36224644 0.28984405 0.88587129 |
| 16459 | | Axis point 48.64944545 39.44798961 0.00000000 |
| 16460 | | Rotation angle (degrees) 169.55613215 |
| 16461 | | Shift along axis 212.88692916 |
| 16462 | | |
| 16463 | | Average map value = 0.385 for 3543 atoms, 606 outside contour |
| 16464 | | |
| 16465 | | > view matrix models #1,1,0,0,-49.455,0,1,0,3.018,0,0,1,32.29 |
| 16466 | | |
| 16467 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16468 | | |
| 16469 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16470 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16471 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16472 | | steps = 64, shift = 1.33, angle = 0.0952 degrees |
| 16473 | | |
| 16474 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16475 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16476 | | Matrix rotation and translation |
| 16477 | | -0.72367452 0.04714449 0.68852929 159.07134929 |
| 16478 | | 0.36966348 -0.81599822 0.44440500 115.39732077 |
| 16479 | | 0.58278992 0.57612871 0.57308952 137.54546697 |
| 16480 | | Axis 0.36180399 0.29043309 0.88585918 |
| 16481 | | Axis point 48.67267645 39.40126590 0.00000000 |
| 16482 | | Rotation angle (degrees) 169.51154520 |
| 16483 | | Shift along axis 212.91376477 |
| 16484 | | |
| 16485 | | Average map value = 0.385 for 3543 atoms, 607 outside contour |
| 16486 | | |
| 16487 | | > select add #1 |
| 16488 | | |
| 16489 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 8 models selected |
| 16490 | | |
| 16491 | | > ui mousemode right zoom |
| 16492 | | |
| 16493 | | > select subtract #1 |
| 16494 | | |
| 16495 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 6 models selected |
| 16496 | | |
| 16497 | | > ui mousemode right "translate selected atoms" |
| 16498 | | |
| 16499 | | Opened 2qe3-assembly1.cif map 5 as #3, grid size 54,54,54, pixel 1.67, shown |
| 16500 | | at level 0.105, step 1, values float32 |
| 16501 | | |
| 16502 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16503 | | |
| 16504 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16505 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16506 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16507 | | steps = 52, shift = 2.77, angle = 0.0819 degrees |
| 16508 | | |
| 16509 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16510 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16511 | | Matrix rotation and translation |
| 16512 | | -0.72380498 0.04699882 0.68840210 159.22780668 |
| 16513 | | 0.36885155 -0.81681071 0.44358628 118.15951785 |
| 16514 | | 0.58314224 0.57498814 0.57387607 137.55558052 |
| 16515 | | Axis 0.36176044 0.28978929 0.88608778 |
| 16516 | | Axis point 48.62915268 40.81866664 0.00000000 |
| 16517 | | Rotation angle (degrees) 169.53618743 |
| 16518 | | Shift along axis 213.73000311 |
| 16519 | | |
| 16520 | | Average map value = 0.385 for 3543 atoms, 606 outside contour |
| 16521 | | Opened 2qe3-assembly1.cif map 5 as #3, grid size 54,54,54, pixel 1.67, shown |
| 16522 | | at level 0.105, step 1, values float32 |
| 16523 | | |
| 16524 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16525 | | |
| 16526 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16527 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16528 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16529 | | steps = 48, shift = 0.921, angle = 0.0717 degrees |
| 16530 | | |
| 16531 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16532 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16533 | | Matrix rotation and translation |
| 16534 | | -0.72315630 0.04772247 0.68903376 158.80901985 |
| 16535 | | 0.36907528 -0.81653590 0.44390600 117.34514292 |
| 16536 | | 0.58380510 0.57531876 0.57286990 137.50484187 |
| 16537 | | Axis 0.36223720 0.29006116 0.88580401 |
| 16538 | | Axis point 48.42642580 40.36744244 0.00000000 |
| 16539 | | Rotation angle (degrees) 169.54923860 |
| 16540 | | Shift along axis 213.36614236 |
| 16541 | | |
| 16542 | | Average map value = 0.385 for 3543 atoms, 607 outside contour |
| 16543 | | Opened 2qe3-assembly1.cif map 5 as #3, grid size 54,54,54, pixel 1.67, shown |
| 16544 | | at level 0.105, step 1, values float32 |
| 16545 | | |
| 16546 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16547 | | |
| 16548 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16549 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16550 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 16551 | | steps = 56, shift = 3.55, angle = 0.114 degrees |
| 16552 | | |
| 16553 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16554 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16555 | | Matrix rotation and translation |
| 16556 | | -0.72428585 0.04651951 0.68792872 157.11422637 |
| 16557 | | 0.36913374 -0.81653518 0.44385872 120.46742937 |
| 16558 | | 0.58236610 0.57541830 0.57423296 137.50866754 |
| 16559 | | Axis 0.36137923 0.28996855 0.88618468 |
| 16560 | | Axis point 47.48827236 41.87590177 0.00000000 |
| 16561 | | Rotation angle (degrees) 169.51231038 |
| 16562 | | Shift along axis 213.56765900 |
| 16563 | | |
| 16564 | | Average map value = 0.3851 for 3543 atoms, 605 outside contour |
| 16565 | | Opened 2qe3-assembly1.cif map 5 as #3, grid size 54,54,54, pixel 1.67, shown |
| 16566 | | at level 0.105, step 1, values float32 |
| 16567 | | |
| 16568 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16569 | | |
| 16570 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16571 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16572 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16573 | | steps = 52, shift = 1.3, angle = 0.0428 degrees |
| 16574 | | |
| 16575 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16576 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16577 | | Matrix rotation and translation |
| 16578 | | -0.72385443 0.04695516 0.68835308 158.41373596 |
| 16579 | | 0.36909627 -0.81656600 0.44383320 120.57404711 |
| 16580 | | 0.58292598 0.57533918 0.57374394 137.53637229 |
| 16581 | | Axis 0.36170686 0.28997696 0.88604826 |
| 16582 | | Axis point 48.10917936 41.96880278 0.00000000 |
| 16583 | | Rotation angle (degrees) 169.52623369 |
| 16584 | | Shift along axis 214.12689318 |
| 16585 | | |
| 16586 | | Average map value = 0.385 for 3543 atoms, 606 outside contour |
| 16587 | | Opened 2qe3-assembly1.cif map 5 as #3, grid size 54,54,54, pixel 1.67, shown |
| 16588 | | at level 0.105, step 1, values float32 |
| 16589 | | |
| 16590 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16591 | | |
| 16592 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16593 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16594 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16595 | | steps = 48, shift = 0.608, angle = 0.0481 degrees |
| 16596 | | |
| 16597 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16598 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16599 | | Matrix rotation and translation |
| 16600 | | -0.72338250 0.04744907 0.68881516 158.37555449 |
| 16601 | | 0.36898728 -0.81665515 0.44375978 119.96766681 |
| 16602 | | 0.58358044 0.57517210 0.57324594 137.50626275 |
| 16603 | | Axis 0.36207049 0.28994533 0.88591008 |
| 16604 | | Axis point 48.09668901 41.66023206 0.00000000 |
| 16605 | | Rotation angle (degrees) 169.54440754 |
| 16606 | | Shift along axis 213.94536275 |
| 16607 | | |
| 16608 | | Average map value = 0.385 for 3543 atoms, 607 outside contour |
| 16609 | | Opened 2qe3-assembly1.cif map 5 as #3, grid size 54,54,54, pixel 1.67, shown |
| 16610 | | at level 0.105, step 1, values float32 |
| 16611 | | |
| 16612 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16613 | | |
| 16614 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16615 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16616 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 16617 | | steps = 56, shift = 0.855, angle = 0.0603 degrees |
| 16618 | | |
| 16619 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16620 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16621 | | Matrix rotation and translation |
| 16622 | | -0.72385737 0.04694649 0.68835058 157.74292905 |
| 16623 | | 0.36938353 -0.81628605 0.44410908 119.39071271 |
| 16624 | | 0.58274034 0.57573700 0.57353342 137.51116514 |
| 16625 | | Axis 0.36168467 0.29019379 0.88598632 |
| 16626 | | Axis point 47.83017338 41.34400536 0.00000000 |
| 16627 | | Rotation angle (degrees) 169.51576227 |
| 16628 | | Shift along axis 213.53265436 |
| 16629 | | |
| 16630 | | Average map value = 0.385 for 3543 atoms, 604 outside contour |
| 16631 | | |
| 16632 | | > select subtract #4 |
| 16633 | | |
| 16634 | | 3 models selected |
| 16635 | | |
| 16636 | | > select add #1 |
| 16637 | | |
| 16638 | | 2 models selected |
| 16639 | | |
| 16640 | | > ui mousemode right "rotate selected models" |
| 16641 | | |
| 16642 | | > view matrix models |
| 16643 | | > #1,0.99996,0.0026024,-0.0090576,-48.644,-0.0020989,0.99848,0.055159,-3.4689,0.0091874,-0.055138,0.99844,38.427 |
| 16644 | | |
| 16645 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16646 | | |
| 16647 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16648 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16649 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16650 | | steps = 52, shift = 0.477, angle = 3.2 degrees |
| 16651 | | |
| 16652 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16653 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16654 | | Matrix rotation and translation |
| 16655 | | -0.72361065 0.04719246 0.68859312 157.71798418 |
| 16656 | | 0.36935619 -0.81631157 0.44408492 119.36338849 |
| 16657 | | 0.58306399 0.57568071 0.57326093 137.49831330 |
| 16658 | | Axis 0.36187213 0.29019203 0.88591035 |
| 16659 | | Axis point 47.80667226 41.32459547 0.00000000 |
| 16660 | | Rotation angle (degrees) 169.52384114 |
| 16661 | | Shift along axis 213.52322529 |
| 16662 | | |
| 16663 | | Average map value = 0.385 for 3543 atoms, 607 outside contour |
| 16664 | | |
| 16665 | | > view matrix models |
| 16666 | | > #1,0.99979,-0.00043564,-0.02041,-46.79,0.0016004,0.99837,0.057088,-4.2029,0.020352,-0.057109,0.99816,37.197 |
| 16667 | | |
| 16668 | | > view matrix models |
| 16669 | | > #1,0.99928,-0.030775,-0.022245,-42.531,0.032012,0.99783,0.057571,-8.3397,0.020425,-0.058241,0.99809,37.343 |
| 16670 | | |
| 16671 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16672 | | |
| 16673 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16674 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16675 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16676 | | steps = 44, shift = 0.369, angle = 2.07 degrees |
| 16677 | | |
| 16678 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16679 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16680 | | Matrix rotation and translation |
| 16681 | | -0.72380642 0.04700082 0.68840044 157.73502257 |
| 16682 | | 0.36962551 -0.81604431 0.44435194 119.35681905 |
| 16683 | | 0.58265018 0.57607516 0.57328542 137.51056267 |
| 16684 | | Axis 0.36170665 0.29038596 0.88591438 |
| 16685 | | Axis point 47.82404335 41.31285021 0.00000000 |
| 16686 | | Rotation angle (degrees) 169.50872997 |
| 16687 | | Shift along axis 213.53593626 |
| 16688 | | |
| 16689 | | Average map value = 0.3851 for 3543 atoms, 608 outside contour |
| 16690 | | |
| 16691 | | > select subtract #1 |
| 16692 | | |
| 16693 | | Nothing selected |
| 16694 | | |
| 16695 | | > select add #4 |
| 16696 | | |
| 16697 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 16698 | | |
| 16699 | | > view matrix models |
| 16700 | | > #4,-0.72179,0.090349,0.68619,108.48,0.35188,-0.80584,0.47624,123.73,0.59598,0.5852,0.54986,169.11 |
| 16701 | | |
| 16702 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16703 | | |
| 16704 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16705 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16706 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16707 | | steps = 52, shift = 0.0672, angle = 3.67 degrees |
| 16708 | | |
| 16709 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16710 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16711 | | Matrix rotation and translation |
| 16712 | | -0.72375965 0.04705949 0.68844561 157.72778573 |
| 16713 | | 0.36929744 -0.81636045 0.44404392 119.36014137 |
| 16714 | | 0.58291625 0.57562228 0.57346981 137.50417976 |
| 16715 | | Axis 0.36176498 0.29014518 0.88596945 |
| 16716 | | Axis point 47.81981872 41.32937773 0.00000000 |
| 16717 | | Rotation angle (degrees) 169.52210717 |
| 16718 | | Shift along axis 213.51666232 |
| 16719 | | |
| 16720 | | Average map value = 0.385 for 3543 atoms, 607 outside contour |
| 16721 | | |
| 16722 | | > ui mousemode right "translate selected models" |
| 16723 | | |
| 16724 | | > view matrix models |
| 16725 | | > #4,-0.74757,0.059344,0.66153,107.59,0.37889,-0.77994,0.49813,124.27,0.54551,0.62303,0.56058,170.83 |
| 16726 | | |
| 16727 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16728 | | |
| 16729 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16730 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16731 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16732 | | steps = 48, shift = 0.947, angle = 0.00899 degrees |
| 16733 | | |
| 16734 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16735 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16736 | | Matrix rotation and translation |
| 16737 | | -0.72384288 0.04696752 0.68836438 157.74098338 |
| 16738 | | 0.36927350 -0.81639040 0.44400877 119.35600766 |
| 16739 | | 0.58282806 0.57558731 0.57359453 137.50784870 |
| 16740 | | Axis 0.36170348 0.29011457 0.88600459 |
| 16741 | | Axis point 47.83100439 41.33193403 0.00000000 |
| 16742 | | Rotation angle (degrees) 169.52029054 |
| 16743 | | Shift along axis 213.51496396 |
| 16744 | | |
| 16745 | | Average map value = 0.385 for 3543 atoms, 608 outside contour |
| 16746 | | |
| 16747 | | > select subtract #4 |
| 16748 | | |
| 16749 | | 3 models selected |
| 16750 | | |
| 16751 | | > select add #4 |
| 16752 | | |
| 16753 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 16754 | | |
| 16755 | | > ui mousemode right "rotate selected models" |
| 16756 | | |
| 16757 | | > view matrix models |
| 16758 | | > #4,-0.61108,0.098353,0.78544,107.85,0.4921,-0.73,0.47427,120.88,0.62002,0.67633,0.39769,166.17 |
| 16759 | | |
| 16760 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16761 | | |
| 16762 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16763 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16764 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 16765 | | steps = 52, shift = 0.25, angle = 11.9 degrees |
| 16766 | | |
| 16767 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16768 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16769 | | Matrix rotation and translation |
| 16770 | | -0.72381309 0.04698488 0.68839452 157.74997528 |
| 16771 | | 0.36904330 -0.81662540 0.44376794 119.39034260 |
| 16772 | | 0.58301084 0.57525243 0.57374470 137.50453689 |
| 16773 | | Axis 0.36174091 0.28993220 0.88604900 |
| 16774 | | Axis point 47.83351867 41.36128913 0.00000000 |
| 16775 | | Rotation angle (degrees) 169.52896167 |
| 16776 | | Shift along axis 213.51548213 |
| 16777 | | |
| 16778 | | Average map value = 0.385 for 3543 atoms, 606 outside contour |
| 16779 | | |
| 16780 | | > select subtract #4 |
| 16781 | | |
| 16782 | | 3 models selected |
| 16783 | | |
| 16784 | | > select add #4 |
| 16785 | | |
| 16786 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 16787 | | |
| 16788 | | > view matrix models |
| 16789 | | > #4,-0.76556,0.041107,0.64205,108.27,0.38635,-0.7686,0.50988,123.9,0.51444,0.6384,0.57253,171.97 |
| 16790 | | |
| 16791 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16792 | | |
| 16793 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16794 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16795 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 16796 | | steps = 48, shift = 0.0403, angle = 2.12 degrees |
| 16797 | | |
| 16798 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16799 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16800 | | Matrix rotation and translation |
| 16801 | | -0.72389918 0.04690505 0.68830944 157.75778467 |
| 16802 | | 0.36887443 -0.81678871 0.44360776 119.39501873 |
| 16803 | | 0.58301083 0.57502705 0.57397060 137.50606611 |
| 16804 | | Axis 0.36168803 0.28979953 0.88611399 |
| 16805 | | Axis point 47.84269685 41.37470367 0.00000000 |
| 16806 | | Rotation angle (degrees) 169.53266528 |
| 16807 | | Shift along axis 213.50577124 |
| 16808 | | |
| 16809 | | Average map value = 0.385 for 3543 atoms, 605 outside contour |
| 16810 | | |
| 16811 | | > ui mousemode right "translate selected atoms" |
| 16812 | | |
| 16813 | | Opened 2qe3-assembly1.cif map 5 as #3, grid size 54,54,54, pixel 1.67, shown |
| 16814 | | at level 0.105, step 1, values float32 |
| 16815 | | |
| 16816 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16817 | | |
| 16818 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16819 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16820 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16821 | | steps = 52, shift = 1.05, angle = 0.084 degrees |
| 16822 | | |
| 16823 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16824 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16825 | | Matrix rotation and translation |
| 16826 | | -0.72394650 0.04686959 0.68826208 156.85316923 |
| 16827 | | 0.36972044 -0.81594571 0.44445404 118.87325187 |
| 16828 | | 0.58241587 0.57622551 0.57337240 137.48318450 |
| 16829 | | Axis 0.36159521 0.29045348 0.88593774 |
| 16830 | | Axis point 47.41457508 41.03835481 0.00000000 |
| 16831 | | Rotation angle (degrees) 169.50157240 |
| 16832 | | Shift along axis 213.04604586 |
| 16833 | | |
| 16834 | | Average map value = 0.3851 for 3543 atoms, 607 outside contour |
| 16835 | | Opened 2qe3-assembly1.cif map 5 as #3, grid size 54,54,54, pixel 1.67, shown |
| 16836 | | at level 0.105, step 1, values float32 |
| 16837 | | |
| 16838 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16839 | | |
| 16840 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16841 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16842 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16843 | | steps = 48, shift = 0.407, angle = 0.0894 degrees |
| 16844 | | |
| 16845 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16846 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16847 | | Matrix rotation and translation |
| 16848 | | -0.72379633 0.04702245 0.68840958 156.49159662 |
| 16849 | | 0.36882125 -0.81683086 0.44357437 118.68470872 |
| 16850 | | 0.58317214 0.57495759 0.57387630 137.44933642 |
| 16851 | | Axis 0.36176988 0.28977625 0.88608819 |
| 16852 | | Axis point 47.24128879 40.97488645 0.00000000 |
| 16853 | | Rotation angle (degrees) 169.53796547 |
| 16854 | | Shift along axis 212.79818974 |
| 16855 | | |
| 16856 | | Average map value = 0.385 for 3543 atoms, 606 outside contour |
| 16857 | | Opened 2qe3-assembly1.cif map 5 as #3, grid size 54,54,54, pixel 1.67, shown |
| 16858 | | at level 0.105, step 1, values float32 |
| 16859 | | |
| 16860 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16861 | | |
| 16862 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16863 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16864 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 16865 | | steps = 48, shift = 0.655, angle = 0.0356 degrees |
| 16866 | | |
| 16867 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16868 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16869 | | Matrix rotation and translation |
| 16870 | | -0.72385203 0.04695385 0.68835570 155.83962166 |
| 16871 | | 0.36918704 -0.81647876 0.44391818 118.64067212 |
| 16872 | | 0.58287148 0.57546309 0.57367505 137.40443982 |
| 16873 | | Axis 0.36170225 0.29004453 0.88602802 |
| 16874 | | Axis point 46.92445771 40.91624850 0.00000000 |
| 16875 | | Rotation angle (degrees) 169.52296412 |
| 16876 | | Shift along axis 212.52280367 |
| 16877 | | |
| 16878 | | Average map value = 0.385 for 3543 atoms, 606 outside contour |
| 16879 | | |
| 16880 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16881 | | |
| 16882 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16883 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16884 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16885 | | steps = 40, shift = 0.029, angle = 0.0312 degrees |
| 16886 | | |
| 16887 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16888 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16889 | | Matrix rotation and translation |
| 16890 | | -0.72375642 0.04706295 0.68844877 155.83151451 |
| 16891 | | 0.36947939 -0.81618055 0.44422324 118.61494022 |
| 16892 | | 0.58280495 0.57587705 0.57332713 137.40258197 |
| 16893 | | Axis 0.36175498 0.29028537 0.88592761 |
| 16894 | | Axis point 46.91528273 40.88455404 0.00000000 |
| 16895 | | Rotation angle (degrees) 169.51573718 |
| 16896 | | Shift along axis 212.53374988 |
| 16897 | | |
| 16898 | | Average map value = 0.385 for 3543 atoms, 608 outside contour |
| 16899 | | |
| 16900 | | > ui mousemode right "rotate selected models" |
| 16901 | | |
| 16902 | | > view matrix models |
| 16903 | | > #4,-0.76208,0.034221,0.64658,106.33,0.42908,-0.72116,0.54389,123.09,0.4849,0.69192,0.53489,172.27 |
| 16904 | | |
| 16905 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16906 | | |
| 16907 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16908 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16909 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16910 | | steps = 48, shift = 0.116, angle = 5.46 degrees |
| 16911 | | |
| 16912 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16913 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16914 | | Matrix rotation and translation |
| 16915 | | -0.72371809 0.04710297 0.68848633 155.82932188 |
| 16916 | | 0.36937253 -0.81628472 0.44412067 118.61802667 |
| 16917 | | 0.58292028 0.57572610 0.57336148 137.39942388 |
| 16918 | | Axis 0.36179123 0.29020741 0.88593835 |
| 16919 | | Axis point 46.91270809 40.89051731 0.00000000 |
| 16920 | | Rotation angle (degrees) 169.52069587 |
| 16921 | | Shift along axis 212.52893137 |
| 16922 | | |
| 16923 | | Average map value = 0.385 for 3543 atoms, 607 outside contour |
| 16924 | | |
| 16925 | | > view matrix models |
| 16926 | | > #4,-0.80848,0.030898,0.58772,106.29,0.29342,-0.8445,0.44803,123.44,0.51017,0.53466,0.67369,172.93 |
| 16927 | | |
| 16928 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16929 | | |
| 16930 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16931 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16932 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16933 | | steps = 56, shift = 0.16, angle = 8.68 degrees |
| 16934 | | |
| 16935 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16936 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16937 | | Matrix rotation and translation |
| 16938 | | -0.72387623 0.04692312 0.68833234 155.83870830 |
| 16939 | | 0.36937128 -0.81630121 0.44409142 118.62945898 |
| 16940 | | 0.58272468 0.57571742 0.57356899 137.40817867 |
| 16941 | | Axis 0.36167105 0.29018001 0.88599640 |
| 16942 | | Axis point 46.92461286 40.90196102 0.00000000 |
| 16943 | | Rotation angle (degrees) 169.51551709 |
| 16944 | | Shift along axis 212.52939792 |
| 16945 | | |
| 16946 | | Average map value = 0.385 for 3543 atoms, 606 outside contour |
| 16947 | | |
| 16948 | | > ui mousemode right "move picked models" |
| 16949 | | |
| 16950 | | > view matrix models |
| 16951 | | > #1,0.99928,-0.030775,-0.022245,-43.046,0.032012,0.99783,0.057571,-8.484,0.020425,-0.058241,0.99809,37.304 |
| 16952 | | |
| 16953 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16954 | | |
| 16955 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16956 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16957 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16958 | | steps = 48, shift = 0.535, angle = 0.0541 degrees |
| 16959 | | |
| 16960 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16961 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16962 | | Matrix rotation and translation |
| 16963 | | -0.72347897 0.04731329 0.68872318 155.84397879 |
| 16964 | | 0.36899005 -0.81667864 0.44371424 118.61880959 |
| 16965 | | 0.58345910 0.57514993 0.57339169 137.38171751 |
| 16966 | | Axis 0.36199551 0.28991463 0.88595076 |
| 16967 | | Axis point 46.91037693 40.90779326 0.00000000 |
| 16968 | | Rotation angle (degrees) 169.54033730 |
| 16969 | | Shift along axis 212.51758690 |
| 16970 | | |
| 16971 | | Average map value = 0.385 for 3543 atoms, 606 outside contour |
| 16972 | | |
| 16973 | | > view matrix models |
| 16974 | | > #1,0.99928,-0.030775,-0.022245,-41.881,0.032012,0.99783,0.057571,-10.916,0.020425,-0.058241,0.99809,37.79 |
| 16975 | | |
| 16976 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 16977 | | |
| 16978 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 16979 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 16980 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 16981 | | steps = 72, shift = 2.74, angle = 0.0452 degrees |
| 16982 | | |
| 16983 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 16984 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 16985 | | Matrix rotation and translation |
| 16986 | | -0.72389740 0.04688632 0.68831259 155.85313573 |
| 16987 | | 0.36917972 -0.81650066 0.44388400 118.62179298 |
| 16988 | | 0.58281977 0.57543752 0.57375322 137.40572073 |
| 16989 | | Axis 0.36166732 0.29002116 0.88604993 |
| 16990 | | Axis point 46.93459166 40.91071095 0.00000000 |
| 16991 | | Rotation angle (degrees) 169.52124646 |
| 16992 | | Shift along axis 212.51814502 |
| 16993 | | |
| 16994 | | Average map value = 0.3851 for 3543 atoms, 606 outside contour |
| 16995 | | |
| 16996 | | > select subtract #4 |
| 16997 | | |
| 16998 | | 3 models selected |
| 16999 | | |
| 17000 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17001 | | |
| 17002 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17003 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17004 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17005 | | steps = 44, shift = 0.0303, angle = 0.0704 degrees |
| 17006 | | |
| 17007 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17008 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17009 | | Matrix rotation and translation |
| 17010 | | -0.72391323 0.04693519 0.68829260 155.83312718 |
| 17011 | | 0.36985511 -0.81579133 0.44462534 118.60482556 |
| 17012 | | 0.58237171 0.57643871 0.57320292 137.41452512 |
| 17013 | | Axis 0.36161290 0.29058023 0.88588896 |
| 17014 | | Axis point 46.92251750 40.86189671 0.00000000 |
| 17015 | | Rotation angle (degrees) 169.49871571 |
| 17016 | | Shift along axis 212.54949607 |
| 17017 | | |
| 17018 | | Average map value = 0.3851 for 3543 atoms, 607 outside contour |
| 17019 | | |
| 17020 | | > volume #1 level 0.1319 |
| 17021 | | |
| 17022 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17023 | | |
| 17024 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17025 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17026 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 17027 | | steps = 28, shift = 0.0445, angle = 0.0565 degrees |
| 17028 | | |
| 17029 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17030 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17031 | | Matrix rotation and translation |
| 17032 | | -0.72385594 0.04694331 0.68835230 155.83561568 |
| 17033 | | 0.36931229 -0.81635938 0.44403353 118.64495177 |
| 17034 | | 0.58278726 0.57563328 0.57358986 137.40685912 |
| 17035 | | Axis 0.36169035 0.29013623 0.88600285 |
| 17036 | | Axis point 46.92155377 40.91201111 0.00000000 |
| 17037 | | Rotation angle (degrees) 169.51819799 |
| 17038 | | Shift along axis 212.53030722 |
| 17039 | | |
| 17040 | | Average map value = 0.385 for 3543 atoms, 489 outside contour |
| 17041 | | |
| 17042 | | > volume #1 level 0.1022 |
| 17043 | | |
| 17044 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17045 | | |
| 17046 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17047 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17048 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17049 | | steps = 40, shift = 0.029, angle = 0.00987 degrees |
| 17050 | | |
| 17051 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17052 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17053 | | Matrix rotation and translation |
| 17054 | | -0.72380654 0.04700473 0.68840006 155.83303360 |
| 17055 | | 0.36921975 -0.81644262 0.44395744 118.61601835 |
| 17056 | | 0.58290725 0.57551020 0.57359144 137.40197007 |
| 17057 | | Axis 0.36173455 0.29007673 0.88600429 |
| 17058 | | Axis point 46.91995902 40.90063171 0.00000000 |
| 17059 | | Rotation angle (degrees) 169.52327801 |
| 17060 | | Shift along axis 212.51667499 |
| 17061 | | |
| 17062 | | Average map value = 0.385 for 3543 atoms, 366 outside contour |
| 17063 | | |
| 17064 | | > volume #1 level 0.06837 |
| 17065 | | |
| 17066 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17067 | | |
| 17068 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17069 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17070 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 17071 | | steps = 44, shift = 0.0315, angle = 0.0764 degrees |
| 17072 | | |
| 17073 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17074 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17075 | | Matrix rotation and translation |
| 17076 | | -0.72456748 0.04620589 0.68765323 155.86004281 |
| 17077 | | 0.36922320 -0.81646949 0.44390517 118.61736972 |
| 17078 | | 0.58195892 0.57553678 0.57452696 137.44091365 |
| 17079 | | Axis 0.36115902 0.28999458 0.88626593 |
| 17080 | | Axis point 46.97146067 40.92394387 0.00000000 |
| 17081 | | Rotation angle (degrees) 169.50003200 |
| 17082 | | Shift along axis 212.49785455 |
| 17083 | | |
| 17084 | | Average map value = 0.3851 for 3543 atoms, 246 outside contour |
| 17085 | | |
| 17086 | | > volume #1 level 0.05567 |
| 17087 | | |
| 17088 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17089 | | |
| 17090 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17091 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17092 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17093 | | steps = 40, shift = 0.0287, angle = 0.0743 degrees |
| 17094 | | |
| 17095 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17096 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17097 | | Matrix rotation and translation |
| 17098 | | -0.72382848 0.04698456 0.68837836 155.83721266 |
| 17099 | | 0.36923116 -0.81643038 0.44397046 118.60947073 |
| 17100 | | 0.58287276 0.57552921 0.57360740 137.40271669 |
| 17101 | | Axis 0.36171736 0.29008488 0.88600864 |
| 17102 | | Axis point 46.92351812 40.89750232 0.00000000 |
| 17103 | | Rotation angle (degrees) 169.52229143 |
| 17104 | | Shift along axis 212.51583388 |
| 17105 | | |
| 17106 | | Average map value = 0.385 for 3543 atoms, 221 outside contour |
| 17107 | | |
| 17108 | | > surface dust #1 size 19.7 |
| 17109 | | |
| 17110 | | > volume #1 level 0.04438 |
| 17111 | | |
| 17112 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17113 | | |
| 17114 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17115 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17116 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 17117 | | steps = 28, shift = 0.0355, angle = 0.00932 degrees |
| 17118 | | |
| 17119 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17120 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17121 | | Matrix rotation and translation |
| 17122 | | -0.72385220 0.04695320 0.68835556 155.83622384 |
| 17123 | | 0.36914503 -0.81652054 0.44387626 118.64425833 |
| 17124 | | 0.58289787 0.57540385 0.57370766 137.40420678 |
| 17125 | | Axis 0.36170496 0.29001194 0.88603758 |
| 17126 | | Axis point 46.92276622 40.92006954 0.00000000 |
| 17127 | | Rotation angle (degrees) 169.52443842 |
| 17128 | | Shift along axis 212.52027735 |
| 17129 | | |
| 17130 | | Average map value = 0.385 for 3543 atoms, 200 outside contour |
| 17131 | | |
| 17132 | | > volume #1 level 0.03732 |
| 17133 | | |
| 17134 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17135 | | |
| 17136 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17137 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17138 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17139 | | steps = 40, shift = 0.0286, angle = 0.00777 degrees |
| 17140 | | |
| 17141 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17142 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17143 | | Matrix rotation and translation |
| 17144 | | -0.72383558 0.04696906 0.68837195 155.83320580 |
| 17145 | | 0.36906807 -0.81659685 0.44379988 118.61543942 |
| 17146 | | 0.58296724 0.57529425 0.57374708 137.40168706 |
| 17147 | | Axis 0.36172268 0.28995367 0.88604942 |
| 17148 | | Axis point 46.92235256 40.90949892 0.00000000 |
| 17149 | | Rotation angle (degrees) 169.52763214 |
| 17150 | | Shift along axis 212.50607141 |
| 17151 | | |
| 17152 | | Average map value = 0.385 for 3543 atoms, 177 outside contour |
| 17153 | | |
| 17154 | | > surface dust #1 size 19.7 |
| 17155 | | |
| 17156 | | [Repeated 1 time(s)] |
| 17157 | | |
| 17158 | | > volume #1 level 0.04296 |
| 17159 | | |
| 17160 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17161 | | |
| 17162 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17163 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17164 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17165 | | steps = 44, shift = 0.00155, angle = 0.025 degrees |
| 17166 | | |
| 17167 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17168 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17169 | | Matrix rotation and translation |
| 17170 | | -0.72385255 0.04694111 0.68835602 155.83446484 |
| 17171 | | 0.36882143 -0.81684737 0.44354382 118.61323775 |
| 17172 | | 0.58310224 0.57494078 0.57396416 137.39959314 |
| 17173 | | Axis 0.36172612 0.28975586 0.88611272 |
| 17174 | | Axis point 46.92530400 40.92260640 0.00000000 |
| 17175 | | Rotation angle (degrees) 169.53557831 |
| 17176 | | Shift along axis 212.48980456 |
| 17177 | | |
| 17178 | | Average map value = 0.385 for 3543 atoms, 194 outside contour |
| 17179 | | |
| 17180 | | > volume #1 level 0.04438 |
| 17181 | | |
| 17182 | | > select add #4 |
| 17183 | | |
| 17184 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 17185 | | |
| 17186 | | > view matrix models |
| 17187 | | > #1,0.99928,-0.030775,-0.022245,-40.538,0.032012,0.99783,0.057571,-11.628,0.020425,-0.058241,0.99809,38.07 |
| 17188 | | |
| 17189 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17190 | | |
| 17191 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17192 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17193 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17194 | | steps = 48, shift = 1.54, angle = 0.0939 degrees |
| 17195 | | |
| 17196 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17197 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17198 | | Matrix rotation and translation |
| 17199 | | -0.72363718 0.04718819 0.68856554 155.82471235 |
| 17200 | | 0.36972836 -0.81592970 0.44447683 118.60781634 |
| 17201 | | 0.58279513 0.57622217 0.57299025 137.39974213 |
| 17202 | | Axis 0.36182801 0.29048995 0.88583073 |
| 17203 | | Axis point 46.90478038 40.86418417 0.00000000 |
| 17204 | | Rotation angle (degrees) 169.51050774 |
| 17205 | | Shift along axis 212.54903785 |
| 17206 | | |
| 17207 | | Average map value = 0.385 for 3543 atoms, 198 outside contour |
| 17208 | | |
| 17209 | | > volume #1 level 0.09378 |
| 17210 | | |
| 17211 | | > ui mousemode right "rotate selected models" |
| 17212 | | |
| 17213 | | > view matrix models |
| 17214 | | > #4,-0.7698,0.038519,0.63712,108.36,0.38176,-0.77217,0.50795,119.8,0.51153,0.63425,0.57971,172.72 |
| 17215 | | |
| 17216 | | > view matrix models |
| 17217 | | > #4,-0.78523,0.028746,0.61854,108.29,0.3584,-0.79349,0.49186,119.87,0.50495,0.6079,0.61277,173.27 |
| 17218 | | |
| 17219 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17220 | | |
| 17221 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17222 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17223 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17224 | | steps = 44, shift = 0.0452, angle = 3.92 degrees |
| 17225 | | |
| 17226 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17227 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17228 | | Matrix rotation and translation |
| 17229 | | -0.72388228 0.04693580 0.68832512 155.85536374 |
| 17230 | | 0.36910421 -0.81655292 0.44385066 118.62662269 |
| 17231 | | 0.58288637 0.57535932 0.57376398 137.40220125 |
| 17232 | | Axis 0.36168585 0.28998623 0.88605380 |
| 17233 | | Axis point 46.93564016 40.91480234 0.00000000 |
| 17234 | | Rotation angle (degrees) 169.52540258 |
| 17235 | | Shift along axis 212.51650922 |
| 17236 | | |
| 17237 | | Average map value = 0.3851 for 3543 atoms, 332 outside contour |
| 17238 | | |
| 17239 | | > view matrix models |
| 17240 | | > #4,-0.67097,0.10843,0.73352,108.46,0.46912,-0.70401,0.53319,118.82,0.57422,0.70186,0.4215,168.9 |
| 17241 | | |
| 17242 | | > view matrix models |
| 17243 | | > #4,-0.71111,0.060107,0.70051,108.38,0.49713,-0.66157,0.56142,119.05,0.49718,0.74747,0.44057,171.43 |
| 17244 | | |
| 17245 | | > ui mousemode right "move picked models" |
| 17246 | | |
| 17247 | | > view matrix models |
| 17248 | | > #1,0.99928,-0.030775,-0.022245,-40.056,0.032012,0.99783,0.057571,-12.91,0.020425,-0.058241,0.99809,38.329 |
| 17249 | | |
| 17250 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17251 | | |
| 17252 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17253 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17254 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17255 | | steps = 56, shift = 1.24, angle = 10.4 degrees |
| 17256 | | |
| 17257 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17258 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17259 | | Matrix rotation and translation |
| 17260 | | -0.72387006 0.04699637 0.68833383 155.83122771 |
| 17261 | | 0.36996161 -0.81567398 0.44475200 118.60479086 |
| 17262 | | 0.58235773 0.57659976 0.57305513 137.41339305 |
| 17263 | | Axis 0.36163914 0.29067697 0.88584651 |
| 17264 | | Axis point 46.91890327 40.85392366 0.00000000 |
| 17265 | | Rotation angle (degrees) 169.49671640 |
| 17266 | | Shift along axis 212.55752645 |
| 17267 | | |
| 17268 | | Average map value = 0.3851 for 3543 atoms, 331 outside contour |
| 17269 | | |
| 17270 | | > volume #1 level 0.06978 |
| 17271 | | |
| 17272 | | > ui mousemode right "rotate selected models" |
| 17273 | | |
| 17274 | | > ui mousemode right rotate |
| 17275 | | |
| 17276 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17277 | | |
| 17278 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17279 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17280 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 17281 | | steps = 28, shift = 0.0465, angle = 0.0785 degrees |
| 17282 | | |
| 17283 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17284 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17285 | | Matrix rotation and translation |
| 17286 | | -0.72384155 0.04695972 0.68836632 155.83783364 |
| 17287 | | 0.36920339 -0.81646551 0.44392896 118.64495597 |
| 17288 | | 0.58287414 0.57548141 0.57365397 137.40450467 |
| 17289 | | Axis 0.36170875 0.29005500 0.88602194 |
| 17290 | | Axis point 46.92264004 40.91740322 0.00000000 |
| 17291 | | Rotation angle (degrees) 169.52254674 |
| 17292 | | Shift along axis 212.52487604 |
| 17293 | | |
| 17294 | | Average map value = 0.385 for 3543 atoms, 249 outside contour |
| 17295 | | |
| 17296 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17297 | | |
| 17298 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17299 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17300 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17301 | | steps = 40, shift = 0.0309, angle = 0.00754 degrees |
| 17302 | | |
| 17303 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17304 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17305 | | Matrix rotation and translation |
| 17306 | | -0.72379909 0.04701318 0.68840731 155.83238795 |
| 17307 | | 0.36925733 -0.81640481 0.44399572 118.61524112 |
| 17308 | | 0.58289269 0.57556315 0.57355310 137.40205542 |
| 17309 | | Axis 0.36173765 0.29010684 0.88599317 |
| 17310 | | Axis point 46.91908479 40.89798401 0.00000000 |
| 17311 | | Rotation angle (degrees) 169.52218717 |
| 17312 | | Shift along axis 212.51881651 |
| 17313 | | |
| 17314 | | Average map value = 0.385 for 3543 atoms, 248 outside contour |
| 17315 | | |
| 17316 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17317 | | |
| 17318 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17319 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17320 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17321 | | steps = 44, shift = 0.0152, angle = 0.076 degrees |
| 17322 | | |
| 17323 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17324 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17325 | | Matrix rotation and translation |
| 17326 | | -0.72386751 0.04705065 0.68833281 155.83106536 |
| 17327 | | 0.36996329 -0.81563889 0.44481497 118.60683709 |
| 17328 | | 0.58235984 0.57664498 0.57300748 137.41250327 |
| 17329 | | Axis 0.36164395 0.29071138 0.88583325 |
| 17330 | | Axis point 46.91892524 40.85141852 0.00000000 |
| 17331 | | Rotation angle (degrees) 169.49828773 |
| 17332 | | Shift along axis 212.56028339 |
| 17333 | | |
| 17334 | | Average map value = 0.3851 for 3543 atoms, 247 outside contour |
| 17335 | | |
| 17336 | | > ui mousemode right rotate |
| 17337 | | |
| 17338 | | > volume #1 level 0.1277 |
| 17339 | | |
| 17340 | | > hide #!4 models |
| 17341 | | |
| 17342 | | > show #!4 models |
| 17343 | | |
| 17344 | | > hide #!4 models |
| 17345 | | |
| 17346 | | > show #!4 models |
| 17347 | | |
| 17348 | | > hide #!4 models |
| 17349 | | |
| 17350 | | > show #!4 models |
| 17351 | | |
| 17352 | | > hide #!4 models |
| 17353 | | |
| 17354 | | > show #!4 models |
| 17355 | | |
| 17356 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17357 | | |
| 17358 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17359 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17360 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 17361 | | steps = 28, shift = 0.0445, angle = 0.0869 degrees |
| 17362 | | |
| 17363 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17364 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17365 | | Matrix rotation and translation |
| 17366 | | -0.72384438 0.04695883 0.68836340 155.83917896 |
| 17367 | | 0.36915225 -0.81651476 0.44388089 118.64288883 |
| 17368 | | 0.58290301 0.57541159 0.57369467 137.40378534 |
| 17369 | | Axis 0.36171023 0.29001672 0.88603387 |
| 17370 | | Axis point 46.92390516 40.91911661 0.00000000 |
| 17371 | | Rotation angle (degrees) 169.52434176 |
| 17372 | | Shift along axis 212.52145331 |
| 17373 | | |
| 17374 | | Average map value = 0.385 for 3543 atoms, 473 outside contour |
| 17375 | | |
| 17376 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17377 | | |
| 17378 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17379 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17380 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17381 | | steps = 40, shift = 0.03, angle = 0.0219 degrees |
| 17382 | | |
| 17383 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17384 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17385 | | Matrix rotation and translation |
| 17386 | | -0.72377865 0.04703717 0.68842716 155.83196607 |
| 17387 | | 0.36935524 -0.81630567 0.44409656 118.61530972 |
| 17388 | | 0.58285604 0.57570179 0.57345119 137.40219980 |
| 17389 | | Axis 0.36174654 0.29018595 0.88596363 |
| 17390 | | Axis point 46.91730097 40.89209264 0.00000000 |
| 17391 | | Rotation angle (degrees) 169.51940306 |
| 17392 | | Shift along axis 212.52552288 |
| 17393 | | |
| 17394 | | Average map value = 0.385 for 3543 atoms, 472 outside contour |
| 17395 | | |
| 17396 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17397 | | |
| 17398 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17399 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17400 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17401 | | steps = 44, shift = 0.0141, angle = 0.0623 degrees |
| 17402 | | |
| 17403 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17404 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17405 | | Matrix rotation and translation |
| 17406 | | -0.72385534 0.04699645 0.68834931 155.83105768 |
| 17407 | | 0.36996312 -0.81568185 0.44473631 118.60538948 |
| 17408 | | 0.58237507 0.57658862 0.57304872 137.41325286 |
| 17409 | | Axis 0.36164927 0.29066997 0.88584467 |
| 17410 | | Axis point 46.91787642 40.85464822 0.00000000 |
| 17411 | | Rotation angle (degrees) 169.49664722 |
| 17412 | | Shift along axis 212.55801032 |
| 17413 | | |
| 17414 | | Average map value = 0.3851 for 3543 atoms, 473 outside contour |
| 17415 | | |
| 17416 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17417 | | |
| 17418 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17419 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17420 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 17421 | | steps = 28, shift = 0.0421, angle = 0.0807 degrees |
| 17422 | | |
| 17423 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17424 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17425 | | Matrix rotation and translation |
| 17426 | | -0.72385419 0.04694873 0.68835377 155.83951830 |
| 17427 | | 0.36917284 -0.81649470 0.44390067 118.64105112 |
| 17428 | | 0.58287779 0.57544088 0.57369092 137.40453299 |
| 17429 | | Axis 0.36170142 0.29003157 0.88603260 |
| 17430 | | Axis point 46.92453613 40.91740501 0.00000000 |
| 17431 | | Rotation angle (degrees) 169.52331757 |
| 17432 | | Shift along axis 212.52192103 |
| 17433 | | |
| 17434 | | Average map value = 0.385 for 3543 atoms, 473 outside contour |
| 17435 | | |
| 17436 | | > select subtract #4 |
| 17437 | | |
| 17438 | | 3 models selected |
| 17439 | | |
| 17440 | | > select add #4 |
| 17441 | | |
| 17442 | | 3543 atoms, 3447 bonds, 6 pseudobonds, 600 residues, 3 models selected |
| 17443 | | |
| 17444 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17445 | | |
| 17446 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17447 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17448 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17449 | | steps = 40, shift = 0.0274, angle = 0.0252 degrees |
| 17450 | | |
| 17451 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17452 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17453 | | Matrix rotation and translation |
| 17454 | | -0.72376553 0.04705198 0.68843994 155.83218498 |
| 17455 | | 0.36940136 -0.81625891 0.44414414 118.61647598 |
| 17456 | | 0.58284310 0.57576687 0.57339901 137.40209689 |
| 17457 | | Axis 0.36175335 0.29022351 0.88594855 |
| 17458 | | Axis point 46.91644268 40.88980683 0.00000000 |
| 17459 | | Rotation angle (degrees) 169.51819279 |
| 17460 | | Shift along axis 212.52929335 |
| 17461 | | |
| 17462 | | Average map value = 0.385 for 3543 atoms, 473 outside contour |
| 17463 | | |
| 17464 | | > ui mousemode right "translate selected models" |
| 17465 | | |
| 17466 | | > view matrix models |
| 17467 | | > #4,-0.74758,0.059331,0.66152,107.24,0.37898,-0.77983,0.49823,117.97,0.54543,0.62317,0.5605,171.66 |
| 17468 | | |
| 17469 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17470 | | |
| 17471 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17472 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17473 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 17474 | | steps = 48, shift = 1.78, angle = 0.0432 degrees |
| 17475 | | |
| 17476 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17477 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17478 | | Matrix rotation and translation |
| 17479 | | -0.72386041 0.04692583 0.68834879 155.84758613 |
| 17480 | | 0.36899461 -0.81668142 0.44370534 118.63826603 |
| 17481 | | 0.58298291 0.57517772 0.57384798 137.40226183 |
| 17482 | | Axis 0.36170795 0.28988352 0.88607839 |
| 17483 | | Axis point 46.93009405 40.92713221 0.00000000 |
| 17484 | | Rotation angle (degrees) 169.52897198 |
| 17485 | | Shift along axis 212.51176302 |
| 17486 | | |
| 17487 | | Average map value = 0.385 for 3543 atoms, 473 outside contour |
| 17488 | | |
| 17489 | | > select subtract #4 |
| 17490 | | |
| 17491 | | 3 models selected |
| 17492 | | |
| 17493 | | > select add #1 |
| 17494 | | |
| 17495 | | 2 models selected |
| 17496 | | |
| 17497 | | > view matrix models |
| 17498 | | > #1,0.99928,-0.030775,-0.022245,-38.514,0.032012,0.99783,0.057571,-13.347,0.020425,-0.058241,0.99809,38.65 |
| 17499 | | |
| 17500 | | > ui mousemode right rotate |
| 17501 | | |
| 17502 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17503 | | |
| 17504 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17505 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17506 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17507 | | steps = 48, shift = 1.62, angle = 0.0293 degrees |
| 17508 | | |
| 17509 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17510 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17511 | | Matrix rotation and translation |
| 17512 | | -0.72394580 0.04684146 0.68826474 155.82525835 |
| 17513 | | 0.36928022 -0.81639951 0.44398643 118.63615687 |
| 17514 | | 0.58269597 0.57558467 0.57373137 137.41169937 |
| 17515 | | Axis 0.36162422 0.29009678 0.88604277 |
| 17516 | | Axis point 46.92124561 40.91182942 0.00000000 |
| 17517 | | Rotation angle (degrees) 169.51638118 |
| 17518 | | Shift along axis 212.51879648 |
| 17519 | | |
| 17520 | | Average map value = 0.385 for 3543 atoms, 473 outside contour |
| 17521 | | |
| 17522 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17523 | | |
| 17524 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17525 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17526 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17527 | | steps = 36, shift = 0.0346, angle = 0.0172 degrees |
| 17528 | | |
| 17529 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17530 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17531 | | Matrix rotation and translation |
| 17532 | | -0.72412183 0.04670783 0.68808862 155.85394809 |
| 17533 | | 0.36919611 -0.81645662 0.44395136 118.61882116 |
| 17534 | | 0.58253051 0.57551452 0.57396971 137.41557824 |
| 17535 | | Axis 0.36149990 0.29004507 0.88611042 |
| 17536 | | Axis point 46.94678973 40.91125445 0.00000000 |
| 17537 | | Rotation angle (degrees) 169.51556223 |
| 17538 | | Shift along axis 212.51136742 |
| 17539 | | |
| 17540 | | Average map value = 0.3851 for 3543 atoms, 473 outside contour |
| 17541 | | |
| 17542 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17543 | | |
| 17544 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17545 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17546 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17547 | | steps = 40, shift = 0.0215, angle = 0.0382 degrees |
| 17548 | | |
| 17549 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17550 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17551 | | Matrix rotation and translation |
| 17552 | | -0.72381051 0.04700292 0.68839601 155.83446440 |
| 17553 | | 0.36944121 -0.81622252 0.44417786 118.61608862 |
| 17554 | | 0.58276198 0.57582246 0.57342563 137.40494901 |
| 17555 | | Axis 0.36171655 0.29024794 0.88595557 |
| 17556 | | Axis point 46.91960650 40.88900820 0.00000000 |
| 17557 | | Rotation angle (degrees) 169.51535318 |
| 17558 | | Shift along axis 212.53066002 |
| 17559 | | |
| 17560 | | Average map value = 0.385 for 3543 atoms, 473 outside contour |
| 17561 | | |
| 17562 | | > select subtract #1 |
| 17563 | | |
| 17564 | | Nothing selected |
| 17565 | | |
| 17566 | | > ui mousemode right "rotate selected models" |
| 17567 | | |
| 17568 | | > volume #1 level 0.1051 |
| 17569 | | |
| 17570 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17571 | | |
| 17572 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17573 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17574 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17575 | | steps = 44, shift = 0.00483, angle = 0.0241 degrees |
| 17576 | | |
| 17577 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17578 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17579 | | Matrix rotation and translation |
| 17580 | | -0.72379198 0.04700743 0.68841517 155.83872984 |
| 17581 | | 0.36920498 -0.81646473 0.44392907 118.61669929 |
| 17582 | | 0.58293468 0.57547862 0.57359525 137.40093785 |
| 17583 | | Axis 0.36174583 0.29005901 0.88600549 |
| 17584 | | Axis point 46.92213949 40.90245846 0.00000000 |
| 17585 | | Rotation angle (degrees) 169.52386683 |
| 17586 | | Shift along axis 212.51783799 |
| 17587 | | |
| 17588 | | Average map value = 0.385 for 3543 atoms, 378 outside contour |
| 17589 | | |
| 17590 | | > volume #1 level 0.07825 |
| 17591 | | |
| 17592 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17593 | | |
| 17594 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17595 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17596 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17597 | | steps = 28, shift = 0.0258, angle = 0.0215 degrees |
| 17598 | | |
| 17599 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17600 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17601 | | Matrix rotation and translation |
| 17602 | | -0.72381942 0.04699137 0.68838743 155.83670155 |
| 17603 | | 0.36898077 -0.81667889 0.44372150 118.64157638 |
| 17604 | | 0.58304256 0.57517596 0.57378913 137.40013103 |
| 17605 | | Axis 0.36174116 0.28989182 0.88606211 |
| 17606 | | Axis point 46.92253263 40.92629734 0.00000000 |
| 17607 | | Rotation angle (degrees) 169.53138739 |
| 17608 | | Shift along axis 212.51082172 |
| 17609 | | |
| 17610 | | Average map value = 0.385 for 3543 atoms, 283 outside contour |
| 17611 | | |
| 17612 | | > volume #1 level 0.06414 |
| 17613 | | |
| 17614 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17615 | | |
| 17616 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17617 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17618 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17619 | | steps = 40, shift = 0.0242, angle = 0.0211 degrees |
| 17620 | | |
| 17621 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17622 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17623 | | Matrix rotation and translation |
| 17624 | | -0.72380572 0.04699044 0.68840189 155.83714820 |
| 17625 | | 0.36877516 -0.81689095 0.44350202 118.61585526 |
| 17626 | | 0.58318964 0.57487482 0.57394144 137.39638457 |
| 17627 | | Axis 0.36176466 0.28972570 0.88610685 |
| 17628 | | Axis point 46.92451949 40.92515733 0.00000000 |
| 17629 | | Rotation angle (degrees) 169.53865131 |
| 17630 | | Shift along axis 212.49031174 |
| 17631 | | |
| 17632 | | Average map value = 0.385 for 3543 atoms, 231 outside contour |
| 17633 | | |
| 17634 | | > volume #1 level 0.05284 |
| 17635 | | |
| 17636 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17637 | | |
| 17638 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17639 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17640 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 17641 | | steps = 28, shift = 0.0223, angle = 0.0347 degrees |
| 17642 | | |
| 17643 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17644 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17645 | | Matrix rotation and translation |
| 17646 | | -0.72385250 0.04694102 0.68835608 155.83990369 |
| 17647 | | 0.36912662 -0.81654638 0.44384404 118.63963729 |
| 17648 | | 0.58290916 0.57536817 0.57373196 137.40423843 |
| 17649 | | Axis 0.36170531 0.28999020 0.88604455 |
| 17650 | | Axis point 46.92487494 40.91968628 0.00000000 |
| 17651 | | Rotation angle (degrees) 169.52472668 |
| 17652 | | Shift along axis 212.51873000 |
| 17653 | | |
| 17654 | | Average map value = 0.385 for 3543 atoms, 218 outside contour |
| 17655 | | |
| 17656 | | > volume #1 level 0.0472 |
| 17657 | | |
| 17658 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17659 | | |
| 17660 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17661 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17662 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17663 | | steps = 28, shift = 0.0476, angle = 0.0657 degrees |
| 17664 | | |
| 17665 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17666 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17667 | | Matrix rotation and translation |
| 17668 | | -0.72379937 0.04700670 0.68840746 155.82851428 |
| 17669 | | 0.36978429 -0.81588800 0.44450686 118.59732744 |
| 17670 | | 0.58255818 0.57629605 0.57315688 137.40932194 |
| 17671 | | Axis 0.36170101 0.29050781 0.88587674 |
| 17672 | | Axis point 46.91480763 40.86146797 0.00000000 |
| 17673 | | Rotation angle (degrees) 169.50325053 |
| 17674 | | Shift along axis 212.54450225 |
| 17675 | | |
| 17676 | | Average map value = 0.385 for 3543 atoms, 207 outside contour |
| 17677 | | |
| 17678 | | > volume #1 level 0.04296 |
| 17679 | | |
| 17680 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17681 | | |
| 17682 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17683 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17684 | | correlation = 0.7878, correlation about mean = 0.1132, overlap = 1860 |
| 17685 | | steps = 28, shift = 0.0553, angle = 0.0954 degrees |
| 17686 | | |
| 17687 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17688 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17689 | | Matrix rotation and translation |
| 17690 | | -0.72377490 0.04702481 0.68843195 155.84088380 |
| 17691 | | 0.36881768 -0.81684646 0.44354860 118.64603651 |
| 17692 | | 0.58320099 0.57493522 0.57386939 137.39580604 |
| 17693 | | Axis 0.36178514 0.28976311 0.88608626 |
| 17694 | | Axis point 46.92311776 40.93691580 0.00000000 |
| 17695 | | Rotation angle (degrees) 169.53813724 |
| 17696 | | Shift along axis 212.50469597 |
| 17697 | | |
| 17698 | | Average map value = 0.385 for 3543 atoms, 193 outside contour |
| 17699 | | |
| 17700 | | > volume #1 level 0.04014 |
| 17701 | | |
| 17702 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17703 | | |
| 17704 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17705 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17706 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17707 | | steps = 40, shift = 0.0415, angle = 0.0778 degrees |
| 17708 | | |
| 17709 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17710 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17711 | | Matrix rotation and translation |
| 17712 | | -0.72376819 0.04705210 0.68843714 155.83058869 |
| 17713 | | 0.36959635 -0.81606445 0.44433921 118.61051263 |
| 17714 | | 0.58271618 0.57604244 0.57325121 137.40466132 |
| 17715 | | Axis 0.36173818 0.29037488 0.88590514 |
| 17716 | | Axis point 46.91493969 40.87638492 0.00000000 |
| 17717 | | Rotation angle (degrees) 169.51126487 |
| 17718 | | Shift along axis 212.53888266 |
| 17719 | | |
| 17720 | | Average map value = 0.3851 for 3543 atoms, 186 outside contour |
| 17721 | | |
| 17722 | | > volume #1 level 0.03732 |
| 17723 | | |
| 17724 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17725 | | |
| 17726 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17727 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17728 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17729 | | steps = 44, shift = 0.0143, angle = 0.0608 degrees |
| 17730 | | |
| 17731 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17732 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17733 | | Matrix rotation and translation |
| 17734 | | -0.72392890 0.04688310 0.68827968 155.83279058 |
| 17735 | | 0.36900583 -0.81665432 0.44374588 118.62104537 |
| 17736 | | 0.58289076 0.57521968 0.57389953 137.40578800 |
| 17737 | | Axis 0.36165714 0.28990303 0.88609274 |
| 17738 | | Axis point 46.92690740 40.91735442 0.00000000 |
| 17739 | | Rotation angle (degrees) 169.52737001 |
| 17740 | | Shift along axis 212.50091285 |
| 17741 | | |
| 17742 | | Average map value = 0.385 for 3543 atoms, 177 outside contour |
| 17743 | | |
| 17744 | | > fitmap #4 inMap #1 resolution 5 metric correlation |
| 17745 | | |
| 17746 | | Fit map 2qe3-assembly1.cif map 5 in map |
| 17747 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc using 13679 points |
| 17748 | | correlation = 0.7878, correlation about mean = 0.1131, overlap = 1860 |
| 17749 | | steps = 40, shift = 0.0154, angle = 0.0533 degrees |
| 17750 | | |
| 17751 | | Position of 2qe3-assembly1.cif map 5 (#3) relative to |
| 17752 | | cryosparc_P1050_J361_class_00_00022_volume_sharp.mrc (#1) coordinates: |
| 17753 | | Matrix rotation and translation |
| 17754 | | -0.72406102 0.04674153 0.68815031 155.84215557 |
| 17755 | | 0.36953713 -0.81613657 0.44425600 118.61196907 |
| 17756 | | 0.58238985 0.57596555 0.57365995 137.41908850 |
| 17757 | | Axis 0.36152076 0.29029485 0.88602011 |
| 17758 | | Axis point 46.93560425 40.88923306 0.00000000 |
| 17759 | | Rotation angle (degrees) 169.50437629 |
| 17760 | | Shift along axis 212.52869470 |
| 17761 | | |
| 17762 | | Average map value = 0.3851 for 3543 atoms, 178 outside contour |
| 17763 | | |
| 17764 | | > save /Users/mansoore.esmaili/Downloads/lowres1078_fit_to2qe3assambly1cif.cxs |
| 17765 | | |
| 17766 | | ——— End of log from Thu Oct 31 14:41:43 2024 ——— |
| 17767 | | |
| 17768 | | opened ChimeraX session |
| 17769 | | |
| 17770 | | > color zone #1 near #4 distance 11.8 |
| 17771 | | |
| 17772 | | > hide #!4 models |
| 17773 | | |
| 17774 | | > volume #1 step 4 |
| 17775 | | |
| 17776 | | > volume #1 step 1 |
| 17777 | | |
| 17778 | | > hide #!1 models |
| 17779 | | |
| 17780 | | > close |
| 17781 | | |
| 17782 | | > open |
| 17783 | | > /Users/mansoore.esmaili/Desktop/MST1R/LocalResolution_1/cryosparc_P1083_J180_004_volume_map_sharp_full.ccp4 |
| 17784 | | |
| 17785 | | Opened cryosparc_P1083_J180_004_volume_map_sharp_full.ccp4 as #1, grid size |
| 17786 | | 340,340,340, pixel 0.839, shown at level 0.0552, step 2, values float32 |
| 17787 | | |
| 17788 | | > volume #1 step 1 |
| 17789 | | |
| 17790 | | > open |
| 17791 | | > /Users/mansoore.esmaili/Desktop/MST1R/LocalResolution_1/cryosparc_P1083_J180_004_volume_map_sharp_local_resolution.ccp4 |
| 17792 | | |
| 17793 | | Opened cryosparc_P1083_J180_004_volume_map_sharp_local_resolution.ccp4 as #2, |
| 17794 | | grid size 340,340,340, pixel 0.839, shown at level 13.7, step 2, values |
| 17795 | | float32 |
| 17796 | | |
| 17797 | | > color sample #1 map #2 palette rainbow |
| 17798 | | |
| 17799 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17800 | | |
| 17801 | | > color sample #1 map #2 palette blue-white-red |
| 17802 | | |
| 17803 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17804 | | |
| 17805 | | > color sample #1 map #2 palette blue-white-red red |
| 17806 | | |
| 17807 | | Expected a keyword |
| 17808 | | |
| 17809 | | > color sample #1 map #2 palette red-white-blue |
| 17810 | | |
| 17811 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17812 | | |
| 17813 | | > show #!2 models |
| 17814 | | |
| 17815 | | > hide #!2 models |
| 17816 | | |
| 17817 | | > ui tool show "Surface Color" |
| 17818 | | |
| 17819 | | > color sample #1.1 map #2 palette 3.578,#ff0000:6.127,#ffffff:8.677,#0000ff |
| 17820 | | |
| 17821 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17822 | | |
| 17823 | | > color sample #1.1 map #2 palette 3.578,#ff0000:6.127,#ffffff:8.677,#0000ff |
| 17824 | | |
| 17825 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17826 | | |
| 17827 | | > color single #1.1 |
| 17828 | | |
| 17829 | | > color sample #1.1 map #2 palette 3.578,#ff0000:6.127,#ffffff:8.677,#0000ff |
| 17830 | | |
| 17831 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17832 | | |
| 17833 | | > color sample #1.1 map #2 palette 3.578,#0000ff:6.127,#ffffff:8.677,#ff0000 |
| 17834 | | |
| 17835 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17836 | | |
| 17837 | | > color sample #1.1 map #2 palette 3.578,#ff0000:6.127,#ffffff:8.677,#0000ff |
| 17838 | | |
| 17839 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17840 | | |
| 17841 | | > color sample #1.1 map #2 palette 2,#ff0000:4,#ffffff:6,#0000ff |
| 17842 | | |
| 17843 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17844 | | |
| 17845 | | > color sample #1.1 map #2 palette 3.2,#ff0000:4,#ffffff:6,#0000ff |
| 17846 | | |
| 17847 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17848 | | |
| 17849 | | > color sample #1.1 map #2 palette 3.6,#ff0000:4,#ffffff:6,#0000ff |
| 17850 | | |
| 17851 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17852 | | |
| 17853 | | > color sample #1.1 map #2 palette 3.6,#ff0000:5,#ffffff:6.5,#0000ff |
| 17854 | | |
| 17855 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17856 | | |
| 17857 | | > color sample #1.1 map #2 palette 3.6,#ff0000:5.5,#ffffff:7,#0000ff |
| 17858 | | |
| 17859 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17860 | | |
| 17861 | | > color sample #1.1 map #2 palette 3.6,#ff0000:5.1,#ffffff:6.4,#0000ff |
| 17862 | | |
| 17863 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17864 | | |
| 17865 | | > key red-white-blue :3.6 :5.1 :6.4 showTool true |
| 17866 | | |
| 17867 | | > ui mousemode right "color key" |
| 17868 | | |
| 17869 | | > ui mousemode right translate |
| 17870 | | |
| 17871 | | > color sample #1.1 map #2 palette 3.4,#ff0000:5.1,#ffffff:6.4,#0000ff |
| 17872 | | |
| 17873 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17874 | | |
| 17875 | | > color sample #1.1 map #2 palette 3.5,#ff0000:5,#ffffff:6,#0000ff |
| 17876 | | |
| 17877 | | Map values for surface "surface": minimum 3.578, mean 4.616, maximum 8.677 |
| 17878 | | |
| 17879 | | > key red-white-blue :3.5 :5.0 :6.0 showTool true |
| 17880 | | |
| 17881 | | > ui mousemode right "color key" |
| 17882 | | |
| 17883 | | > key ticks true |
| 17884 | | |
| 17885 | | > key red-white-blue :3.5 :5.0 :6.0 |
| 17886 | | |
| 17887 | | > key blue-white-red :6.0 :5.0 :3.5 |
| 17888 | | |
| 17889 | | > key red-white-blue :3.5 :5.0 :6.0 |
| 17890 | | |
| 17891 | | > key blue-white-red :6.0 :5.0 :3.5 |
| 17892 | | |
| 17893 | | > key red-white-blue :3.5 :5.0 :6.0 |
| 17894 | | |
| 17895 | | > key pos 0.723644,0.0960495 size 0.00117861,0.00102201 |
| 17896 | | |
| 17897 | | > key red-white-blue :3.5 :5.0 :6.0 showTool true |
| 17898 | | |
| 17899 | | [Repeated 1 time(s)] |
| 17900 | | |
| 17901 | | > ui mousemode right translate |
| 17902 | | |
| 17903 | | > key red-white-blue :3.5 :5.0 :6.0 showTool true |
| 17904 | | |
| 17905 | | > ui mousemode right "color key" |
| 17906 | | |
| 17907 | | > key blue-white-red :6.0 :5.0 :3.5 |
| 17908 | | |
| 17909 | | [Repeated 1 time(s)] |
| 17910 | | |
| 17911 | | > key pos 0.845467,0.111522 size 0.115017,0.0124312 |
| 17912 | | |
| 17913 | | > undo |
| 17914 | | |
| 17915 | | > key red-white-blue :3.5 :5.0 :6.0 showTool true |
| 17916 | | |
| 17917 | | > key delete |
| 17918 | | |
| 17919 | | > ui mousemode right translate |
| 17920 | | |
| 17921 | | > key red-white-blue :3.5 :5.0 :6.0 showTool true |
| 17922 | | |
| 17923 | | > ui mousemode right "color key" |
| 17924 | | |
| 17925 | | > key pos 0.716741,0.0805916 size 0.147596,0.0236488 |
| 17926 | | |
| 17927 | | > key pos 0.800897,0.0893377 size 0.0461005,0.0412588 |
| 17928 | | |
| 17929 | | > key pos 0.813349,0.113222 size 0,0 |
| 17930 | | |
| 17931 | | > key pos 0.334576,0.274258 size 0.224621,0.0325177 |
| 17932 | | |
| 17933 | | > ui mousemode right translate |
| 17934 | | |
| 17935 | | > ui mousemode right "rotate selected models" |
| 17936 | | |
| 17937 | | > key red-white-blue :3.5 :5.0 :6.0 showTool true |
| 17938 | | |
| 17939 | | > ui mousemode right "color key" |
| 17940 | | |
| 17941 | | > key delete |
| 17942 | | |
| 17943 | | > ui mousemode right "rotate selected models" |
| 17944 | | |
| 17945 | | > key red-white-blue :3.5 :5.0 :6.0 showTool true |
| 17946 | | |
| 17947 | | > ui mousemode right "color key" |
| 17948 | | |
| 17949 | | > key red-white-blue :3.5 :5.0 :6.0 |
| 17950 | | |
| 17951 | | > key pos 0.451961,0.0612077 size 0.197232,0.0175806 |
| 17952 | | |
| 17953 | | > ui mousemode right "rotate selected models" |
| 17954 | | |
| 17955 | | > lighting soft |
| 17956 | | |
| 17957 | | > volume #1 level 0.0652 |
| 17958 | | |
| 17959 | | > volume #1 level 0.0552 |
| 17960 | | |
| 17961 | | > volume #1 level 0.0452 |
| 17962 | | |
| 17963 | | > surface dust #1 size 8.39 |
| 17964 | | |
| 17965 | | > ui mousemode right translate |
| 17966 | | |
| 17967 | | > save /Users/mansoore.esmaili/Desktop/image1.png supersample 3 |
| 17968 | | |
| 17969 | | > save "/Users/mansoore.esmaili/Desktop/MST1R/LocalResolution_1/session of |
| 17970 | | > local resolutionmapchanged_Nov152024.cxs" |
| 17971 | | |
| 17972 | | ——— End of log from Fri Nov 15 15:56:37 2024 ——— |
| 17973 | | |
| 17974 | | opened ChimeraX session |
| 17975 | | |
| 17976 | | > save "/Users/mansoore.esmaili/Desktop/MST1R/LocalResolution_1/session of |
| 17977 | | > local resolutionmapchanged_Nov152024final.cxs" |
| 17978 | | |
| 17979 | | > close session |
| 17980 | | |
| 17981 | | > open |
| 17982 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc |
| 17983 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J29_class_01_00122_volume_sharp.mrc |
| 17984 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc |
| 17985 | | |
| 17986 | | Opened cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc as #1.1, grid size |
| 17987 | | 128,128,128, pixel 2.1, shown at level 0.116, step 1, values float32 |
| 17988 | | Opened cryosparc_P1095_J29_class_01_00122_volume_sharp.mrc as #1.2, grid size |
| 17989 | | 128,128,128, pixel 2.1, shown at level 0.126, step 1, values float32 |
| 17990 | | Opened cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc as #1.3, grid size |
| 17991 | | 128,128,128, pixel 2.1, shown at level 0.0939, step 1, values float32 |
| 17992 | | |
| 17993 | | > hide #!1.3 models |
| 17994 | | |
| 17995 | | > hide #!1.2 models |
| 17996 | | |
| 17997 | | > hide #!1.1 models |
| 17998 | | |
| 17999 | | > hide #!1 models |
| 18000 | | |
| 18001 | | > show #!1.1 models |
| 18002 | | |
| 18003 | | > hide #!1.1 models |
| 18004 | | |
| 18005 | | > show #!1.2 models |
| 18006 | | |
| 18007 | | > surface dust #1.2 size 21 |
| 18008 | | |
| 18009 | | > show #!1.1 models |
| 18010 | | |
| 18011 | | > hide #!1.1 models |
| 18012 | | |
| 18013 | | > show #!1.1 models |
| 18014 | | |
| 18015 | | > surface dust #1.1 size 21 |
| 18016 | | |
| 18017 | | > surface dust #1.2 size 21 |
| 18018 | | |
| 18019 | | > show #!1.3 models |
| 18020 | | |
| 18021 | | > surface dust #1.1 size 21 |
| 18022 | | |
| 18023 | | > surface dust #1.2 size 21 |
| 18024 | | |
| 18025 | | > surface dust #1.3 size 21 |
| 18026 | | |
| 18027 | | > hide #!1 models |
| 18028 | | |
| 18029 | | > hide #!1.1 models |
| 18030 | | |
| 18031 | | > hide #!1.2 models |
| 18032 | | |
| 18033 | | > hide #!1.3 models |
| 18034 | | |
| 18035 | | > show #!1.3 models |
| 18036 | | |
| 18037 | | > show #!1.1 models |
| 18038 | | |
| 18039 | | > ui tool show "Fit in Map" |
| 18040 | | |
| 18041 | | > fitmap #1.1 inMap #1.3 |
| 18042 | | |
| 18043 | | Fit map cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc in map |
| 18044 | | cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc using 20945 points |
| 18045 | | correlation = 0.6091, correlation about mean = 0.4215, overlap = 1066 |
| 18046 | | steps = 268, shift = 7.74, angle = 21.5 degrees |
| 18047 | | |
| 18048 | | Position of cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc (#1.1) |
| 18049 | | relative to cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc (#1.3) |
| 18050 | | coordinates: |
| 18051 | | Matrix rotation and translation |
| 18052 | | 0.94794217 0.30813807 0.08035276 -43.35706275 |
| 18053 | | -0.28746198 0.93659280 -0.20039842 73.17025434 |
| 18054 | | -0.13700820 0.16686775 0.97641380 2.29948715 |
| 18055 | | Axis 0.50124091 0.29665188 -0.81286851 |
| 18056 | | Axis point 218.01424700 174.45539339 0.00000000 |
| 18057 | | Rotation angle (degrees) 21.49111546 |
| 18058 | | Shift along axis -1.89542046 |
| 18059 | | |
| 18060 | | |
| 18061 | | > show #!1.2 models |
| 18062 | | |
| 18063 | | > fitmap #1.1 inMap #1.3 |
| 18064 | | |
| 18065 | | Fit map cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc in map |
| 18066 | | cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc using 20945 points |
| 18067 | | correlation = 0.6089, correlation about mean = 0.4214, overlap = 1066 |
| 18068 | | steps = 44, shift = 0.00747, angle = 0.143 degrees |
| 18069 | | |
| 18070 | | Position of cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc (#1.1) |
| 18071 | | relative to cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc (#1.3) |
| 18072 | | coordinates: |
| 18073 | | Matrix rotation and translation |
| 18074 | | 0.94728630 0.31026459 0.07990339 -43.49251897 |
| 18075 | | -0.28975596 0.93606423 -0.19956261 73.42496097 |
| 18076 | | -0.13671191 0.16589045 0.97662184 2.36527477 |
| 18077 | | Axis 0.49708726 0.29463895 -0.81614468 |
| 18078 | | Axis point 216.96383790 173.97087520 0.00000000 |
| 18079 | | Rotation angle (degrees) 21.56733853 |
| 18080 | | Shift along axis -1.91612983 |
| 18081 | | |
| 18082 | | |
| 18083 | | > fitmap #1.1 inMap #1.3 |
| 18084 | | |
| 18085 | | Fit map cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc in map |
| 18086 | | cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc using 20945 points |
| 18087 | | correlation = 0.6089, correlation about mean = 0.4216, overlap = 1066 |
| 18088 | | steps = 44, shift = 0.0469, angle = 0.0705 degrees |
| 18089 | | |
| 18090 | | Position of cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc (#1.1) |
| 18091 | | relative to cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc (#1.3) |
| 18092 | | coordinates: |
| 18093 | | Matrix rotation and translation |
| 18094 | | 0.94693945 0.31139681 0.07960965 -43.55348535 |
| 18095 | | -0.29093267 0.93571232 -0.19950097 73.58170751 |
| 18096 | | -0.13661569 0.16575429 0.97665842 2.39189990 |
| 18097 | | Axis 0.49569018 0.29344075 -0.81742508 |
| 18098 | | Axis point 216.51418007 173.65007408 0.00000000 |
| 18099 | | Rotation angle (degrees) 21.61888556 |
| 18100 | | Shift along axis -1.95236228 |
| 18101 | | |
| 18102 | | |
| 18103 | | > fitmap #1.3 inMap #1.1 |
| 18104 | | |
| 18105 | | Fit map cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc in map |
| 18106 | | cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc using 20944 points |
| 18107 | | correlation = 0.6053, correlation about mean = 0.3987, overlap = 1087 |
| 18108 | | steps = 188, shift = 0.896, angle = 4.95 degrees |
| 18109 | | |
| 18110 | | Position of cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc (#1.3) |
| 18111 | | relative to cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc (#1.1) |
| 18112 | | coordinates: |
| 18113 | | Matrix rotation and translation |
| 18114 | | 0.92580688 -0.36482677 -0.09890935 71.06826456 |
| 18115 | | 0.37617848 0.91488696 0.14653192 -59.02985139 |
| 18116 | | 0.03703210 -0.17286783 0.98424862 16.28274385 |
| 18117 | | Axis -0.39032979 -0.16613036 0.90556245 |
| 18118 | | Axis point 192.76142759 152.18778253 0.00000000 |
| 18119 | | Rotation angle (degrees) 24.15087812 |
| 18120 | | Shift along axis -3.18836892 |
| 18121 | | |
| 18122 | | |
| 18123 | | > hide #!1 models |
| 18124 | | |
| 18125 | | > hide #!1.1 models |
| 18126 | | |
| 18127 | | > hide #!1.2 models |
| 18128 | | |
| 18129 | | > hide #!1.3 models |
| 18130 | | |
| 18131 | | > show #!1.3 models |
| 18132 | | |
| 18133 | | > show #!1.1 models |
| 18134 | | |
| 18135 | | > hide #!1.3 models |
| 18136 | | |
| 18137 | | > lighting soft |
| 18138 | | |
| 18139 | | > set bgColor white |
| 18140 | | |
| 18141 | | > set bgColor #ffffff00 |
| 18142 | | |
| 18143 | | > lighting simple |
| 18144 | | |
| 18145 | | > set bgColor white |
| 18146 | | |
| 18147 | | > set bgColor black |
| 18148 | | |
| 18149 | | > set bgColor transparent |
| 18150 | | |
| 18151 | | > lighting soft |
| 18152 | | |
| 18153 | | > lighting full |
| 18154 | | |
| 18155 | | > open |
| 18156 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J36_007_volume_map_sharp.mrc |
| 18157 | | |
| 18158 | | Opened cryosparc_P1095_J36_007_volume_map_sharp.mrc as #2, grid size |
| 18159 | | 320,320,320, pixel 0.839, shown at level 0.0422, step 2, values float32 |
| 18160 | | |
| 18161 | | > surface dust #1.1 size 21 |
| 18162 | | |
| 18163 | | > surface dust #2 size 8.39 |
| 18164 | | |
| 18165 | | > hide #!1 models |
| 18166 | | |
| 18167 | | > hide #!1.1 models |
| 18168 | | |
| 18169 | | > show #!1.1 models |
| 18170 | | |
| 18171 | | > volume #2 step 1 |
| 18172 | | |
| 18173 | | > fitmap #2 inMap #1.1 |
| 18174 | | |
| 18175 | | Fit map cryosparc_P1095_J36_007_volume_map_sharp.mrc in map |
| 18176 | | cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc using 325119 points |
| 18177 | | correlation = 0.7865, correlation about mean = 0.5706, overlap = 1.031e+04 |
| 18178 | | steps = 212, shift = 6.8, angle = 21.7 degrees |
| 18179 | | |
| 18180 | | Position of cryosparc_P1095_J36_007_volume_map_sharp.mrc (#2) relative to |
| 18181 | | cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc (#1.1) coordinates: |
| 18182 | | Matrix rotation and translation |
| 18183 | | 0.99993494 0.00332905 0.01091049 -1.79078867 |
| 18184 | | -0.00342647 0.99995432 0.00892305 -0.62197392 |
| 18185 | | -0.01088029 -0.00895985 0.99990067 2.98358934 |
| 18186 | | Axis -0.61691851 0.75173094 -0.23304967 |
| 18187 | | Axis point 271.43176126 0.00000000 169.03901873 |
| 18188 | | Rotation angle (degrees) 0.83045882 |
| 18189 | | Shift along axis -0.05811088 |
| 18190 | | |
| 18191 | | |
| 18192 | | > hide #!1.1 models |
| 18193 | | |
| 18194 | | > show #!1.1 models |
| 18195 | | |
| 18196 | | > hide #!1.1 models |
| 18197 | | |
| 18198 | | > open |
| 18199 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1094_J44_006_volume_map_sharp.mrc.download |
| 18200 | | |
| 18201 | | Unrecognized file suffix '.download' |
| 18202 | | |
| 18203 | | > open |
| 18204 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1094_J44_006_volume_map_sharp.mrc |
| 18205 | | |
| 18206 | | Opened cryosparc_P1094_J44_006_volume_map_sharp.mrc as #3, grid size |
| 18207 | | 360,360,360, pixel 0.839, shown at level 0.0418, step 2, values float32 |
| 18208 | | |
| 18209 | | > surface dust #2 size 8.39 |
| 18210 | | |
| 18211 | | > surface dust #3 size 8.39 |
| 18212 | | |
| 18213 | | > show #!1.1 models |
| 18214 | | |
| 18215 | | > hide #!1.1 models |
| 18216 | | |
| 18217 | | > show #!1.2 models |
| 18218 | | |
| 18219 | | > hide #!1.2 models |
| 18220 | | |
| 18221 | | > show #!1.3 models |
| 18222 | | |
| 18223 | | > hide #!2 models |
| 18224 | | |
| 18225 | | > hide #!1.3 models |
| 18226 | | |
| 18227 | | > volume #3 step 1 |
| 18228 | | |
| 18229 | | > fitmap #3 inMap #2 |
| 18230 | | |
| 18231 | | Fit map cryosparc_P1094_J44_006_volume_map_sharp.mrc in map |
| 18232 | | cryosparc_P1095_J36_007_volume_map_sharp.mrc using 460856 points |
| 18233 | | correlation = 0.2673, correlation about mean = 0.2032, overlap = 1120 |
| 18234 | | steps = 228, shift = 25.1, angle = 7.97 degrees |
| 18235 | | |
| 18236 | | Position of cryosparc_P1094_J44_006_volume_map_sharp.mrc (#3) relative to |
| 18237 | | cryosparc_P1095_J36_007_volume_map_sharp.mrc (#2) coordinates: |
| 18238 | | Matrix rotation and translation |
| 18239 | | 0.92471582 -0.37722778 -0.05098874 64.12907979 |
| 18240 | | 0.38056815 0.91907885 0.10228372 -78.70270759 |
| 18241 | | 0.00827841 -0.11398806 0.99344763 4.55932460 |
| 18242 | | Axis -0.27366514 -0.07499524 0.95889682 |
| 18243 | | Axis point 233.35960298 118.15064098 0.00000000 |
| 18244 | | Rotation angle (degrees) 23.27467171 |
| 18245 | | Shift along axis -7.27564320 |
| 18246 | | |
| 18247 | | |
| 18248 | | > show #!2 models |
| 18249 | | |
| 18250 | | > open |
| 18251 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J38_006_volume_map_sharp.mrc |
| 18252 | | |
| 18253 | | Opened cryosparc_P1095_J38_006_volume_map_sharp.mrc as #4, grid size |
| 18254 | | 320,320,320, pixel 0.839, shown at level 0.0378, step 2, values float32 |
| 18255 | | |
| 18256 | | > hide #!2 models |
| 18257 | | |
| 18258 | | > hide #!1 models |
| 18259 | | |
| 18260 | | > surface dust #3 size 8.39 |
| 18261 | | |
| 18262 | | > surface dust #4 size 8.39 |
| 18263 | | |
| 18264 | | > hide #!3 models |
| 18265 | | |
| 18266 | | > volume #4 step 1 |
| 18267 | | |
| 18268 | | > surface dust #4 size 8.39 |
| 18269 | | |
| 18270 | | [Repeated 2 time(s)] |
| 18271 | | |
| 18272 | | > show #!3 models |
| 18273 | | |
| 18274 | | > fitmap #3 inMap #4 |
| 18275 | | |
| 18276 | | Fit map cryosparc_P1094_J44_006_volume_map_sharp.mrc in map |
| 18277 | | cryosparc_P1095_J38_006_volume_map_sharp.mrc using 460856 points |
| 18278 | | correlation = 0.3071, correlation about mean = 0.2536, overlap = 1549 |
| 18279 | | steps = 1208, shift = 14.3, angle = 17.9 degrees |
| 18280 | | |
| 18281 | | Position of cryosparc_P1094_J44_006_volume_map_sharp.mrc (#3) relative to |
| 18282 | | cryosparc_P1095_J38_006_volume_map_sharp.mrc (#4) coordinates: |
| 18283 | | Matrix rotation and translation |
| 18284 | | 0.99823740 0.05272337 0.02724573 -28.58189544 |
| 18285 | | -0.05694083 0.98026836 0.18929260 -46.34936948 |
| 18286 | | -0.01672798 -0.19051034 0.98154265 24.97367179 |
| 18287 | | Axis -0.95486304 0.11055436 -0.27570692 |
| 18288 | | Axis point 0.00000000 127.33160109 267.05403170 |
| 18289 | | Rotation angle (degrees) 11.47136861 |
| 18290 | | Shift along axis 15.28225653 |
| 18291 | | |
| 18292 | | |
| 18293 | | > hide #!3 models |
| 18294 | | |
| 18295 | | > hide #!4 models |
| 18296 | | |
| 18297 | | > show #!3 models |
| 18298 | | |
| 18299 | | > show #!4 models |
| 18300 | | |
| 18301 | | > hide #!3 models |
| 18302 | | |
| 18303 | | > show #!2 models |
| 18304 | | |
| 18305 | | > hide #!4 models |
| 18306 | | |
| 18307 | | > hide #!2 models |
| 18308 | | |
| 18309 | | > show #!4 models |
| 18310 | | |
| 18311 | | > show #!1.3 models |
| 18312 | | |
| 18313 | | > hide #!1.3 models |
| 18314 | | |
| 18315 | | > show #!1.2 models |
| 18316 | | |
| 18317 | | > hide #!1.2 models |
| 18318 | | |
| 18319 | | > show #!1.1 models |
| 18320 | | |
| 18321 | | > hide #!4 models |
| 18322 | | |
| 18323 | | > hide #!1.1 models |
| 18324 | | |
| 18325 | | > show #!1.3 models |
| 18326 | | |
| 18327 | | > show #!4 models |
| 18328 | | |
| 18329 | | > hide #!4 models |
| 18330 | | |
| 18331 | | > vop gaussian #1.3 sdev 6.29 |
| 18332 | | |
| 18333 | | Opened cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc gaussian as #5, |
| 18334 | | grid size 128,128,128, pixel 2.1, shown at step 1, values float32 |
| 18335 | | |
| 18336 | | > hide #!5 models |
| 18337 | | |
| 18338 | | > show #!4 models |
| 18339 | | |
| 18340 | | > vop gaussian #4 sdev 2.52 |
| 18341 | | |
| 18342 | | Opened cryosparc_P1095_J38_006_volume_map_sharp.mrc gaussian as #6, grid size |
| 18343 | | 320,320,320, pixel 0.839, shown at step 1, values float32 |
| 18344 | | |
| 18345 | | > show #!5 models |
| 18346 | | |
| 18347 | | > hide #!5 models |
| 18348 | | |
| 18349 | | > hide #!6 models |
| 18350 | | |
| 18351 | | > show #!3 models |
| 18352 | | |
| 18353 | | > show #!4 models |
| 18354 | | |
| 18355 | | > hide #!3 models |
| 18356 | | |
| 18357 | | > ui tool show "Selection Inspector" |
| 18358 | | |
| 18359 | | > ui mousemode right "map eraser" |
| 18360 | | |
| 18361 | | > volume erase #4 center 235.98,132.49,118.47 radius 9.697 |
| 18362 | | |
| 18363 | | Opened cryosparc_P1095_J38_006_volume_map_sharp.mrc copy as #8, grid size |
| 18364 | | 320,320,320, pixel 0.839, shown at step 1, values float32 |
| 18365 | | |
| 18366 | | > surface dust #8 size 8.39 |
| 18367 | | |
| 18368 | | > open |
| 18369 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J42_004_volume_map_sharp.mrc |
| 18370 | | |
| 18371 | | Opened cryosparc_P1095_J42_004_volume_map_sharp.mrc as #9, grid size |
| 18372 | | 352,352,352, pixel 0.839, shown at level 0.0281, step 2, values float32 |
| 18373 | | |
| 18374 | | > surface dust #8 size 8.39 |
| 18375 | | |
| 18376 | | > surface dust #9 size 8.39 |
| 18377 | | |
| 18378 | | > volume #9 step 1 |
| 18379 | | |
| 18380 | | > surface dust #8 size 8.39 |
| 18381 | | |
| 18382 | | > surface dust #9 size 8.39 |
| 18383 | | |
| 18384 | | > surface dust #8 size 8.39 |
| 18385 | | |
| 18386 | | > surface dust #9 size 8.39 |
| 18387 | | |
| 18388 | | > fitmap #8 inMap #9 |
| 18389 | | |
| 18390 | | Fit map cryosparc_P1095_J38_006_volume_map_sharp.mrc copy in map |
| 18391 | | cryosparc_P1095_J42_004_volume_map_sharp.mrc using 327077 points |
| 18392 | | correlation = 0.435, correlation about mean = 0.2546, overlap = 1475 |
| 18393 | | steps = 608, shift = 13.9, angle = 5.33 degrees |
| 18394 | | |
| 18395 | | Position of cryosparc_P1095_J38_006_volume_map_sharp.mrc copy (#8) relative to |
| 18396 | | cryosparc_P1095_J42_004_volume_map_sharp.mrc (#9) coordinates: |
| 18397 | | Matrix rotation and translation |
| 18398 | | 0.99686949 0.07879752 0.00649350 -0.48593475 |
| 18399 | | -0.07838767 0.99571970 -0.04896579 24.98793059 |
| 18400 | | -0.01032409 0.04830349 0.99877935 -2.85435160 |
| 18401 | | Axis 0.52404996 0.09060679 -0.84685421 |
| 18402 | | Axis point 311.03803102 47.96373183 0.00000000 |
| 18403 | | Rotation angle (degrees) 5.32501712 |
| 18404 | | Shift along axis 4.42664178 |
| 18405 | | |
| 18406 | | |
| 18407 | | > hide #!8 models |
| 18408 | | |
| 18409 | | > hide #!9 models |
| 18410 | | |
| 18411 | | > show #!8 models |
| 18412 | | |
| 18413 | | > open |
| 18414 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J44_005_volume_map_sharp.mrc |
| 18415 | | |
| 18416 | | Opened cryosparc_P1095_J44_005_volume_map_sharp.mrc as #10, grid size |
| 18417 | | 300,300,300, pixel 0.839, shown at level 0.0359, step 2, values float32 |
| 18418 | | |
| 18419 | | > hide #7 models |
| 18420 | | |
| 18421 | | > surface dust #8 size 8.39 |
| 18422 | | |
| 18423 | | > surface dust #10 size 8.39 |
| 18424 | | |
| 18425 | | > volume #10 step 1 |
| 18426 | | |
| 18427 | | > hide #!8 models |
| 18428 | | |
| 18429 | | > volume #10 level 0.02595 |
| 18430 | | |
| 18431 | | > surface dust #10 size 8.39 |
| 18432 | | |
| 18433 | | [Repeated 1 time(s)] |
| 18434 | | |
| 18435 | | > volume #10 level 0.02927 |
| 18436 | | |
| 18437 | | > volume #10 level 0.03425 |
| 18438 | | |
| 18439 | | > ui mousemode right "rotate selected models" |
| 18440 | | |
| 18441 | | > show #!8 models |
| 18442 | | |
| 18443 | | > hide #!10 models |
| 18444 | | |
| 18445 | | > surface dust #8 size 8.39 |
| 18446 | | |
| 18447 | | [Repeated 1 time(s)] |
| 18448 | | |
| 18449 | | > volume #8 level 0.04793 |
| 18450 | | |
| 18451 | | > show #!10 models |
| 18452 | | |
| 18453 | | > fitmap #10 inMap #8 |
| 18454 | | |
| 18455 | | Fit map cryosparc_P1095_J44_005_volume_map_sharp.mrc in map |
| 18456 | | cryosparc_P1095_J38_006_volume_map_sharp.mrc copy using 286936 points |
| 18457 | | correlation = 0.4795, correlation about mean = 0.2733, overlap = 1874 |
| 18458 | | steps = 496, shift = 24.9, angle = 6.98 degrees |
| 18459 | | |
| 18460 | | Position of cryosparc_P1095_J44_005_volume_map_sharp.mrc (#10) relative to |
| 18461 | | cryosparc_P1095_J38_006_volume_map_sharp.mrc copy (#8) coordinates: |
| 18462 | | Matrix rotation and translation |
| 18463 | | 0.99992533 0.01218826 -0.00088190 6.94857613 |
| 18464 | | -0.01221019 0.99941692 -0.03188625 11.54537924 |
| 18465 | | 0.00049275 0.03189464 0.99949112 0.14066361 |
| 18466 | | Axis 0.93380580 -0.02012594 -0.35721377 |
| 18467 | | Axis point 0.00000000 -68.05697506 367.24175928 |
| 18468 | | Rotation angle (degrees) 1.95709149 |
| 18469 | | Shift along axis 6.20601211 |
| 18470 | | |
| 18471 | | |
| 18472 | | > volume #10 level 0.03923 |
| 18473 | | |
| 18474 | | > hide #!8 models |
| 18475 | | |
| 18476 | | > volume #10 level 0.03923 |
| 18477 | | |
| 18478 | | > show #!8 models |
| 18479 | | |
| 18480 | | > hide #!8 models |
| 18481 | | |
| 18482 | | > show #!3 models |
| 18483 | | |
| 18484 | | > hide #!10 models |
| 18485 | | |
| 18486 | | > show #!10 models |
| 18487 | | |
| 18488 | | > hide #!3 models |
| 18489 | | |
| 18490 | | > volume #10 level 0.03425 |
| 18491 | | |
| 18492 | | > show #!8 models |
| 18493 | | |
| 18494 | | > hide #!10 models |
| 18495 | | |
| 18496 | | > open |
| 18497 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J63_class_00_00162_volume_sharp.mrc |
| 18498 | | |
| 18499 | | Opened cryosparc_P1095_J63_class_00_00162_volume_sharp.mrc as #7, grid size |
| 18500 | | 128,128,128, pixel 2.1, shown at level 0.0875, step 1, values float32 |
| 18501 | | |
| 18502 | | > hide #!8 models |
| 18503 | | |
| 18504 | | > show #!8 models |
| 18505 | | |
| 18506 | | > volume #7 level 0.08452 |
| 18507 | | |
| 18508 | | > open |
| 18509 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J63_class_02_00162_volume_sharp.mrc |
| 18510 | | |
| 18511 | | Opened cryosparc_P1095_J63_class_02_00162_volume_sharp.mrc as #11, grid size |
| 18512 | | 128,128,128, pixel 2.1, shown at level 0.0796, step 1, values float32 |
| 18513 | | |
| 18514 | | > volume #11 level 0.05293 |
| 18515 | | |
| 18516 | | > surface dust #8 size 8.39 |
| 18517 | | |
| 18518 | | > surface dust #11 size 21 |
| 18519 | | |
| 18520 | | > fitmap #8 inMap #11 |
| 18521 | | |
| 18522 | | Fit map cryosparc_P1095_J38_006_volume_map_sharp.mrc copy in map |
| 18523 | | cryosparc_P1095_J63_class_02_00162_volume_sharp.mrc using 220153 points |
| 18524 | | correlation = 0.7971, correlation about mean = 0.5356, overlap = 8708 |
| 18525 | | steps = 116, shift = 14, angle = 6 degrees |
| 18526 | | |
| 18527 | | Position of cryosparc_P1095_J38_006_volume_map_sharp.mrc copy (#8) relative to |
| 18528 | | cryosparc_P1095_J63_class_02_00162_volume_sharp.mrc (#11) coordinates: |
| 18529 | | Matrix rotation and translation |
| 18530 | | 0.99974707 -0.01622099 0.01557773 0.14303202 |
| 18531 | | 0.01630163 0.99985430 -0.00506346 -1.58396306 |
| 18532 | | -0.01549333 0.00531612 0.99986584 0.98910754 |
| 18533 | | Axis 0.22485467 0.67309722 0.70454277 |
| 18534 | | Axis point 83.35469256 12.19130310 0.00000000 |
| 18535 | | Rotation angle (degrees) 1.32254176 |
| 18536 | | Shift along axis -0.33713116 |
| 18537 | | |
| 18538 | | |
| 18539 | | > volume #11 level 0.05145 |
| 18540 | | |
| 18541 | | > hide #!8 models |
| 18542 | | |
| 18543 | | > vop gaussian #11 sdev 6.29 |
| 18544 | | |
| 18545 | | Opened cryosparc_P1095_J63_class_02_00162_volume_sharp.mrc gaussian as #12, |
| 18546 | | grid size 128,128,128, pixel 2.1, shown at step 1, values float32 |
| 18547 | | |
| 18548 | | > open |
| 18549 | | > /Users/mansoore.esmaili/Downloads/20241121T1647581100_model_1_ptm_relaxed.pdb |
| 18550 | | |
| 18551 | | Summary of feedback from opening |
| 18552 | | /Users/mansoore.esmaili/Downloads/20241121T1647581100_model_1_ptm_relaxed.pdb |
| 18553 | | --- |
| 18554 | | warnings | Ignored bad PDB record found on line 1 |
| 18555 | | REMARK no_recycling=3, max_templates=4, config_preset=model_1_ptm |
| 18556 | | |
| 18557 | | Ignored bad PDB record found on line 2 |
| 18558 | | PARENT 6y41_H 4zfg_A 6y41_F 1m1j_F |
| 18559 | | |
| 18560 | | Chain information for 20241121T1647581100_model_1_ptm_relaxed.pdb #13 |
| 18561 | | --- |
| 18562 | | Chain | Description |
| 18563 | | A | No description available |
| 18564 | | |
| 18565 | | Computing secondary structure |
| 18566 | | |
| 18567 | | > hide #!12 models |
| 18568 | | |
| 18569 | | > hide #!11 models |
| 18570 | | |
| 18571 | | > hide #13 models |
| 18572 | | |
| 18573 | | > show #13 models |
| 18574 | | |
| 18575 | | > hide #!12 models |
| 18576 | | |
| 18577 | | > show #!12 models |
| 18578 | | |
| 18579 | | > hide #13 models |
| 18580 | | |
| 18581 | | > show #13 models |
| 18582 | | |
| 18583 | | > hide #!12 models |
| 18584 | | |
| 18585 | | > hide #13 models |
| 18586 | | |
| 18587 | | > show #13 models |
| 18588 | | |
| 18589 | | > hide #13 models |
| 18590 | | |
| 18591 | | > open |
| 18592 | | > /Users/mansoore.esmaili/Downloads/20241121T1647581100_model_1_ptm_output_dict.pkl |
| 18593 | | |
| 18594 | | Unrecognized file suffix '.pkl' |
| 18595 | | |
| 18596 | | > open |
| 18597 | | > /Users/mansoore.esmaili/Downloads/20241121T1647581100_model_1_ptm_unrelaxed.pdb |
| 18598 | | |
| 18599 | | Summary of feedback from opening |
| 18600 | | /Users/mansoore.esmaili/Downloads/20241121T1647581100_model_1_ptm_unrelaxed.pdb |
| 18601 | | --- |
| 18602 | | warnings | Ignored bad PDB record found on line 1 |
| 18603 | | REMARK no_recycling=3, max_templates=4, config_preset=model_1_ptm |
| 18604 | | |
| 18605 | | Ignored bad PDB record found on line 2 |
| 18606 | | PARENT 6y41_H 4zfg_A 6y41_F 1m1j_F |
| 18607 | | |
| 18608 | | Chain information for 20241121T1647581100_model_1_ptm_unrelaxed.pdb #14 |
| 18609 | | --- |
| 18610 | | Chain | Description |
| 18611 | | A | No description available |
| 18612 | | |
| 18613 | | Computing secondary structure |
| 18614 | | |
| 18615 | | > show #13 models |
| 18616 | | |
| 18617 | | > hide #14 models |
| 18618 | | |
| 18619 | | > show #14 models |
| 18620 | | |
| 18621 | | > color #14 #cfbb6bff |
| 18622 | | |
| 18623 | | > color #14 #cfc95aff |
| 18624 | | |
| 18625 | | > hide #13 models |
| 18626 | | |
| 18627 | | > ui mousemode right "translate selected models" |
| 18628 | | |
| 18629 | | > ui mousemode right "rotate selected models" |
| 18630 | | |
| 18631 | | > ui mousemode right "translate selected models" |
| 18632 | | |
| 18633 | | > ui mousemode right "rotate selected models" |
| 18634 | | |
| 18635 | | > ui mousemode right translate |
| 18636 | | |
| 18637 | | > open |
| 18638 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J77_008_volume_map_sharp.mrc.download |
| 18639 | | |
| 18640 | | Unrecognized file suffix '.download' |
| 18641 | | |
| 18642 | | > open |
| 18643 | | > /Users/mansoore.esmaili/Downloads/cryosparc_P1095_J77_008_volume_map_sharp.mrc |
| 18644 | | |
| 18645 | | Opened cryosparc_P1095_J77_008_volume_map_sharp.mrc as #15, grid size |
| 18646 | | 320,320,320, pixel 0.839, shown at level 0.0502, step 2, values float32 |
| 18647 | | |
| 18648 | | > surface dust #15 size 8.39 |
| 18649 | | |
| 18650 | | > volume #15 step 1 |
| 18651 | | |
| 18652 | | > ui mousemode right "rotate selected models" |
| 18653 | | |
| 18654 | | > hide #14 models |
| 18655 | | |
| 18656 | | > volume #15 level 0.05787 |
| 18657 | | |
| 18658 | | > show #!1.1 models |
| 18659 | | |
| 18660 | | > fitmap #1.1 inMap #15 |
| 18661 | | |
| 18662 | | Fit map cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc in map |
| 18663 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc using 20945 points |
| 18664 | | correlation = 0.2248, correlation about mean = 0.1403, overlap = 266.4 |
| 18665 | | steps = 2000, shift = 1.24, angle = 5.32 degrees |
| 18666 | | |
| 18667 | | Position of cryosparc_P1095_J29_class_00_00122_volume_sharp.mrc (#1.1) |
| 18668 | | relative to cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 18669 | | Matrix rotation and translation |
| 18670 | | 0.92257778 0.38333735 0.04362003 -44.68772200 |
| 18671 | | -0.37170461 0.91343912 -0.16572467 83.00974723 |
| 18672 | | -0.10337270 0.13668013 0.98520690 -0.19394289 |
| 18673 | | Axis 0.36587488 0.17784423 -0.91351355 |
| 18674 | | Axis point 188.30567627 153.26142751 0.00000000 |
| 18675 | | Rotation angle (degrees) 24.40995140 |
| 18676 | | Shift along axis -1.41014074 |
| 18677 | | |
| 18678 | | |
| 18679 | | > show #!1.2 models |
| 18680 | | |
| 18681 | | > show #!1.3 models |
| 18682 | | |
| 18683 | | > hide #!1.1 models |
| 18684 | | |
| 18685 | | > hide #!1.2 models |
| 18686 | | |
| 18687 | | > fitmap #1.3 inMap #15 |
| 18688 | | |
| 18689 | | Fit map cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc in map |
| 18690 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc using 20944 points |
| 18691 | | correlation = 0.4366, correlation about mean = 0.2939, overlap = 564.3 |
| 18692 | | steps = 160, shift = 1.66, angle = 7.46 degrees |
| 18693 | | |
| 18694 | | Position of cryosparc_P1095_J29_class_02_00122_volume_sharp.mrc (#1.3) |
| 18695 | | relative to cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 18696 | | Matrix rotation and translation |
| 18697 | | 0.99879795 0.04897840 -0.00194436 -5.92915678 |
| 18698 | | -0.04899020 0.99877763 -0.00657372 7.77242821 |
| 18699 | | 0.00162001 0.00666107 0.99997650 -1.55713807 |
| 18700 | | Axis 0.13378918 -0.03603188 -0.99035456 |
| 18701 | | Axis point 155.84960556 126.16210682 0.00000000 |
| 18702 | | Rotation angle (degrees) 2.83508474 |
| 18703 | | Shift along axis 0.46880651 |
| 18704 | | |
| 18705 | | |
| 18706 | | > volume #15 level 0.05034 |
| 18707 | | |
| 18708 | | > open /Users/mansoore.esmaili/Downloads/ranked_4.pdb |
| 18709 | | |
| 18710 | | Chain information for ranked_4.pdb #16 |
| 18711 | | --- |
| 18712 | | Chain | Description |
| 18713 | | A | No description available |
| 18714 | | |
| 18715 | | Computing secondary structure |
| 18716 | | |
| 18717 | | > hide #!15 models |
| 18718 | | |
| 18719 | | > hide #16 models |
| 18720 | | |
| 18721 | | > show #16 models |
| 18722 | | |
| 18723 | | > show #!15 models |
| 18724 | | |
| 18725 | | > hide #16 models |
| 18726 | | |
| 18727 | | > open |
| 18728 | | > /Users/mansoore.esmaili/Downloads/relaxed_model_1_multimer_v3_pred_0.pdb |
| 18729 | | |
| 18730 | | Chain information for relaxed_model_1_multimer_v3_pred_0.pdb #17 |
| 18731 | | --- |
| 18732 | | Chain | Description |
| 18733 | | A | No description available |
| 18734 | | B | No description available |
| 18735 | | |
| 18736 | | Computing secondary structure |
| 18737 | | |
| 18738 | | > open /Users/mansoore.esmaili/Downloads/ranked_4.pdb |
| 18739 | | |
| 18740 | | Chain information for ranked_4.pdb #18 |
| 18741 | | --- |
| 18742 | | Chain | Description |
| 18743 | | A | No description available |
| 18744 | | |
| 18745 | | Computing secondary structure |
| 18746 | | |
| 18747 | | > hide #17 models |
| 18748 | | |
| 18749 | | > open /Users/mansoore.esmaili/Downloads/ranked_4-2.pdb |
| 18750 | | |
| 18751 | | Chain information for ranked_4-2.pdb #19 |
| 18752 | | --- |
| 18753 | | Chain | Description |
| 18754 | | A | No description available |
| 18755 | | B | No description available |
| 18756 | | |
| 18757 | | Computing secondary structure |
| 18758 | | |
| 18759 | | > hide #18 models |
| 18760 | | |
| 18761 | | > hide #!1.3 models |
| 18762 | | |
| 18763 | | > hide #!1 models |
| 18764 | | |
| 18765 | | > ui mousemode right "translate selected models" |
| 18766 | | |
| 18767 | | > hide #!15 models |
| 18768 | | |
| 18769 | | > show #!15 models |
| 18770 | | |
| 18771 | | > hide #!15 models |
| 18772 | | |
| 18773 | | > show #!15 models |
| 18774 | | |
| 18775 | | > select add #19 |
| 18776 | | |
| 18777 | | 3495 atoms, 3537 bonds, 233 residues, 1 model selected |
| 18778 | | |
| 18779 | | > view matrix models #19,1,0,0,103.7,0,1,0,22.632,0,0,1,-18.003 |
| 18780 | | |
| 18781 | | > view matrix models #19,1,0,0,105.35,0,1,0,18.589,0,0,1,-14.468 |
| 18782 | | |
| 18783 | | > view matrix models #19,1,0,0,207.33,0,1,0,94.282,0,0,1,79.196 |
| 18784 | | |
| 18785 | | > view matrix models #19,1,0,0,191.09,0,1,0,166.37,0,0,1,137.98 |
| 18786 | | |
| 18787 | | > view matrix models #19,1,0,0,65.855,0,1,0,119.35,0,0,1,201.7 |
| 18788 | | |
| 18789 | | > volume #15 level 0.08798 |
| 18790 | | |
| 18791 | | > view matrix models #19,1,0,0,97.127,0,1,0,123.97,0,0,1,149.76 |
| 18792 | | |
| 18793 | | > view matrix models #19,1,0,0,111.09,0,1,0,142.7,0,0,1,146.08 |
| 18794 | | |
| 18795 | | > view matrix models #19,1,0,0,107.73,0,1,0,125.9,0,0,1,171.39 |
| 18796 | | |
| 18797 | | > view matrix models #19,1,0,0,106.2,0,1,0,130.33,0,0,1,181.52 |
| 18798 | | |
| 18799 | | > view matrix models #19,1,0,0,121.13,0,1,0,116.98,0,0,1,163.3 |
| 18800 | | |
| 18801 | | > view matrix models #19,1,0,0,133.46,0,1,0,115.63,0,0,1,175.89 |
| 18802 | | |
| 18803 | | > view matrix models #19,1,0,0,140.6,0,1,0,125.33,0,0,1,177.31 |
| 18804 | | |
| 18805 | | > fitmap #19 inMap #15 |
| 18806 | | |
| 18807 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 18808 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 18809 | | average map value = 0.06643, steps = 76 |
| 18810 | | shifted from previous position = 3.57 |
| 18811 | | rotated from previous position = 6.52 degrees |
| 18812 | | atoms outside contour = 2335, contour level = 0.087976 |
| 18813 | | |
| 18814 | | Position of ranked_4-2.pdb (#19) relative to |
| 18815 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 18816 | | Matrix rotation and translation |
| 18817 | | 0.99363287 0.04131301 -0.10481868 137.81599882 |
| 18818 | | -0.03988724 0.99908142 0.01566306 127.53365025 |
| 18819 | | 0.10536948 -0.01138240 0.99436800 177.60224373 |
| 18820 | | Axis -0.11917193 -0.92616372 -0.35779716 |
| 18821 | | Axis point -951.55972842 0.00000000 1147.39435937 |
| 18822 | | Rotation angle (degrees) 6.51552707 |
| 18823 | | Shift along axis -198.08641798 |
| 18824 | | |
| 18825 | | |
| 18826 | | > view matrix models |
| 18827 | | > #19,0.99363,0.041313,-0.10482,136.01,-0.039887,0.99908,0.015663,123.98,0.10537,-0.011382,0.99437,175.4 |
| 18828 | | |
| 18829 | | > view matrix models |
| 18830 | | > #19,0.99363,0.041313,-0.10482,110.2,-0.039887,0.99908,0.015663,104.78,0.10537,-0.011382,0.99437,202.62 |
| 18831 | | |
| 18832 | | > ui mousemode right "rotate selected models" |
| 18833 | | |
| 18834 | | > view matrix models |
| 18835 | | > #19,-0.89791,-0.11134,-0.42586,107.92,-0.24606,0.92916,0.27589,102.73,0.36498,0.35251,-0.8617,214.52 |
| 18836 | | |
| 18837 | | > view matrix models |
| 18838 | | > #19,0.21467,0.35381,-0.91035,113.84,-0.034882,0.93426,0.35487,102.71,0.97606,-0.044427,0.2129,208.83 |
| 18839 | | |
| 18840 | | > view matrix models |
| 18841 | | > #19,0.70742,0.70407,-0.062037,110.61,-0.63529,0.67186,0.3808,100.85,0.30979,-0.22998,0.92257,203.04 |
| 18842 | | |
| 18843 | | > view matrix models |
| 18844 | | > #19,-0.62582,0.20126,0.75356,102.27,-0.35785,0.78437,-0.50667,106.74,-0.69304,-0.58674,-0.41885,208.06 |
| 18845 | | |
| 18846 | | > view matrix models |
| 18847 | | > #19,-0.73177,0.27362,0.62421,102.93,-0.22086,0.77125,-0.59699,107.51,-0.64477,-0.57473,-0.50395,208.67 |
| 18848 | | |
| 18849 | | > view matrix models |
| 18850 | | > #19,-0.58664,-0.0090964,0.8098,101.63,-0.02598,0.99963,-0.0075915,104.94,-0.80943,-0.025492,-0.58666,209.84 |
| 18851 | | |
| 18852 | | > view matrix models |
| 18853 | | > #19,-0.58017,-0.029012,0.81398,101.58,-0.011036,0.99955,0.027761,104.77,-0.81442,0.0071232,-0.58023,209.86 |
| 18854 | | |
| 18855 | | > view matrix models |
| 18856 | | > #19,-0.58154,-0.024699,0.81314,101.59,-0.014282,0.99969,0.020151,104.8,-0.81339,0.00010594,-0.58172,209.85 |
| 18857 | | |
| 18858 | | > view matrix models |
| 18859 | | > #19,-0.57848,-0.034405,0.81497,101.57,-0.0069704,0.99928,0.037238,104.72,-0.81567,0.015861,-0.5783,209.86 |
| 18860 | | |
| 18861 | | > ui mousemode right "translate selected models" |
| 18862 | | |
| 18863 | | > view matrix models |
| 18864 | | > #19,-0.57848,-0.034405,0.81497,129.59,-0.0069704,0.99928,0.037238,135.81,-0.81567,0.015861,-0.5783,175.6 |
| 18865 | | |
| 18866 | | > fitmap #19 inMap #15 |
| 18867 | | |
| 18868 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 18869 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 18870 | | average map value = 0.06552, steps = 136 |
| 18871 | | shifted from previous position = 8.3 |
| 18872 | | rotated from previous position = 21.9 degrees |
| 18873 | | atoms outside contour = 2309, contour level = 0.087976 |
| 18874 | | |
| 18875 | | Position of ranked_4-2.pdb (#19) relative to |
| 18876 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 18877 | | Matrix rotation and translation |
| 18878 | | -0.41976791 0.29330462 0.85893382 136.35629208 |
| 18879 | | 0.06988239 0.95398148 -0.29160896 130.99227555 |
| 18880 | | -0.90493721 -0.06238374 -0.42094764 176.14781976 |
| 18881 | | Axis 0.12786732 0.98392949 -0.12463027 |
| 18882 | | Axis point 120.14579464 -0.00000000 58.35795793 |
| 18883 | | Rotation angle (degrees) 116.31890924 |
| 18884 | | Shift along axis 124.36932547 |
| 18885 | | |
| 18886 | | |
| 18887 | | > fitmap #19 inMap #15 |
| 18888 | | |
| 18889 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 18890 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 18891 | | average map value = 0.06551, steps = 48 |
| 18892 | | shifted from previous position = 0.0094 |
| 18893 | | rotated from previous position = 0.0377 degrees |
| 18894 | | atoms outside contour = 2308, contour level = 0.087976 |
| 18895 | | |
| 18896 | | Position of ranked_4-2.pdb (#19) relative to |
| 18897 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 18898 | | Matrix rotation and translation |
| 18899 | | -0.42022179 0.29332745 0.85870406 136.35784216 |
| 18900 | | 0.07028412 0.95399077 -0.29148198 130.98293681 |
| 18901 | | -0.90469541 -0.06213382 -0.42150397 176.14690682 |
| 18902 | | Axis 0.12797126 0.98393838 -0.12445330 |
| 18903 | | Axis point 120.09636502 0.00000000 58.37418315 |
| 18904 | | Rotation angle (degrees) 116.35090401 |
| 18905 | | Shift along axis 124.40695945 |
| 18906 | | |
| 18907 | | |
| 18908 | | > fitmap #19 inMap #15 |
| 18909 | | |
| 18910 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 18911 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 18912 | | average map value = 0.06552, steps = 48 |
| 18913 | | shifted from previous position = 0.008 |
| 18914 | | rotated from previous position = 0.0239 degrees |
| 18915 | | atoms outside contour = 2313, contour level = 0.087976 |
| 18916 | | |
| 18917 | | Position of ranked_4-2.pdb (#19) relative to |
| 18918 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 18919 | | Matrix rotation and translation |
| 18920 | | -0.41988745 0.29324576 0.85889548 136.35708608 |
| 18921 | | 0.07011445 0.95401464 -0.29144474 130.99067506 |
| 18922 | | -0.90486380 -0.06215301 -0.42113953 176.14897137 |
| 18923 | | Axis 0.12791424 0.98394272 -0.12447755 |
| 18924 | | Axis point 120.12768212 0.00000000 58.35818865 |
| 18925 | | Rotation angle (degrees) 116.32780371 |
| 18926 | | Shift along axis 124.40274310 |
| 18927 | | |
| 18928 | | |
| 18929 | | > volume #15 level 0.1745 |
| 18930 | | |
| 18931 | | > view matrix models |
| 18932 | | > #19,-0.41989,0.29325,0.8589,138.91,0.070114,0.95401,-0.29144,87.635,-0.90486,-0.062153,-0.42114,166.01 |
| 18933 | | |
| 18934 | | > ui mousemode right "rotate selected models" |
| 18935 | | |
| 18936 | | > view matrix models |
| 18937 | | > #19,-0.35891,0.15836,-0.91984,149.02,0.50556,0.8614,-0.048968,86.95,0.7846,-0.48261,-0.38923,168.47 |
| 18938 | | |
| 18939 | | > select subtract #19 |
| 18940 | | |
| 18941 | | Nothing selected |
| 18942 | | |
| 18943 | | > select add #15 |
| 18944 | | |
| 18945 | | 2 models selected |
| 18946 | | |
| 18947 | | > view matrix models |
| 18948 | | > #15,0.93406,-0.22004,-0.28127,81.511,0.2578,0.96051,0.10472,-44.283,0.24712,-0.17033,0.9539,-2.0483 |
| 18949 | | |
| 18950 | | > view matrix models |
| 18951 | | > #15,0.98114,-0.16247,-0.10471,41.281,0.18282,0.95591,0.22983,-51.522,0.062748,-0.24464,0.96758,31.739 |
| 18952 | | |
| 18953 | | > view matrix models |
| 18954 | | > #15,0.96315,-0.10688,-0.24683,56.155,0.16724,0.95667,0.23834,-50.753,0.21067,-0.27084,0.93929,19.603 |
| 18955 | | |
| 18956 | | > view matrix models |
| 18957 | | > #15,0.94945,-0.24505,-0.19618,70.779,0.29072,0.92217,0.2551,-64.877,0.1184,-0.29924,0.9468,35.139 |
| 18958 | | |
| 18959 | | > select subtract #15 |
| 18960 | | |
| 18961 | | Nothing selected |
| 18962 | | |
| 18963 | | > select add #19 |
| 18964 | | |
| 18965 | | 3495 atoms, 3537 bonds, 233 residues, 1 model selected |
| 18966 | | |
| 18967 | | > view matrix models |
| 18968 | | > #19,0.93708,-0.25105,0.2426,144.19,0.16065,0.92704,0.3388,84.139,-0.30996,-0.27851,0.90904,159.15 |
| 18969 | | |
| 18970 | | > view matrix models |
| 18971 | | > #19,-0.49077,0.86755,0.080656,144.32,-0.82567,-0.49264,0.27491,79.843,0.27823,0.068324,0.95808,160.71 |
| 18972 | | |
| 18973 | | > view matrix models |
| 18974 | | > #19,-0.95913,0.27688,-0.058396,143.06,-0.27695,-0.96086,-0.0071165,81.703,-0.058081,0.009347,0.99827,159.69 |
| 18975 | | |
| 18976 | | > view matrix models |
| 18977 | | > #19,-0.6785,-0.014357,0.73446,138.52,-0.13025,-0.98162,-0.13952,82.725,0.72296,-0.19033,0.66416,162.82 |
| 18978 | | |
| 18979 | | > view matrix models |
| 18980 | | > #19,-0.42328,-0.1566,0.89236,137.86,-0.1266,-0.96506,-0.22941,83.281,0.89711,-0.21008,0.38866,164.73 |
| 18981 | | |
| 18982 | | > select add #15 |
| 18983 | | |
| 18984 | | 3495 atoms, 3537 bonds, 233 residues, 3 models selected |
| 18985 | | |
| 18986 | | > select subtract #19 |
| 18987 | | |
| 18988 | | 2 models selected |
| 18989 | | |
| 18990 | | > view matrix models |
| 18991 | | > #15,0.94989,-0.032049,-0.31093,56.328,0.15811,0.90736,0.38948,-64.168,0.26965,-0.41913,0.86696,43.611 |
| 18992 | | |
| 18993 | | > view matrix models |
| 18994 | | > #15,0.28454,0.86131,-0.42094,32.456,-0.8013,0.45472,0.38878,131.62,0.52627,0.22667,0.81955,-78.149 |
| 18995 | | |
| 18996 | | > view matrix models |
| 18997 | | > #15,-0.60846,0.54492,-0.57692,221.86,-0.78099,-0.28217,0.55716,211.66,0.14082,0.78958,0.59727,-75.685 |
| 18998 | | |
| 18999 | | > view matrix models |
| 19000 | | > #15,-0.9426,0.29276,0.16062,197.28,-0.17461,-0.84211,0.51025,217.71,0.28464,0.45292,0.84489,-81.975 |
| 19001 | | |
| 19002 | | > view matrix models |
| 19003 | | > #15,-0.79385,-0.59199,0.13908,308.84,0.60424,-0.79366,0.070688,168.67,0.068536,0.14015,0.98775,-27.881 |
| 19004 | | |
| 19005 | | > view matrix models |
| 19006 | | > #15,-0.24846,-0.96808,-0.032904,314.48,0.93747,-0.23177,-0.25968,89.58,0.24377,-0.095367,0.96513,-14.112 |
| 19007 | | |
| 19008 | | > view matrix models |
| 19009 | | > #15,-0.28162,-0.90434,0.32071,258.66,0.9138,-0.35472,-0.19784,101.73,0.29268,0.23735,0.92628,-63.483 |
| 19010 | | |
| 19011 | | > view matrix models |
| 19012 | | > #15,0.63614,-0.73262,-0.24205,190.68,0.45983,0.61189,-0.64354,87.048,0.61959,0.29808,0.72613,-87.676 |
| 19013 | | |
| 19014 | | > view matrix models |
| 19015 | | > #15,0.8638,-0.46839,-0.18562,113.31,0.22195,0.6845,-0.69441,116.05,0.45231,0.55864,0.69523,-98.436 |
| 19016 | | |
| 19017 | | > view matrix models |
| 19018 | | > #15,0.90168,-0.40137,-0.16084,94.864,0.18714,0.69759,-0.69163,118.46,0.3898,0.59353,0.70411,-96.326 |
| 19019 | | |
| 19020 | | > select subtract #15 |
| 19021 | | |
| 19022 | | Nothing selected |
| 19023 | | |
| 19024 | | > select add #19 |
| 19025 | | |
| 19026 | | 3495 atoms, 3537 bonds, 233 residues, 1 model selected |
| 19027 | | |
| 19028 | | > view matrix models |
| 19029 | | > #19,-0.22734,-0.099063,0.96876,137.93,-0.098921,-0.98732,-0.12417,82.689,0.96878,-0.12406,0.21465,166.04 |
| 19030 | | |
| 19031 | | > ui mousemode right "translate selected models" |
| 19032 | | |
| 19033 | | > view matrix models |
| 19034 | | > #19,-0.22734,-0.099063,0.96876,139.23,-0.098921,-0.98732,-0.12417,66.778,0.96878,-0.12406,0.21465,161.43 |
| 19035 | | |
| 19036 | | > ui mousemode right "rotate selected models" |
| 19037 | | |
| 19038 | | > view matrix models |
| 19039 | | > #19,0.86803,-0.087693,0.4887,144.24,-0.15732,-0.98214,0.1032,65.36,0.47093,-0.16647,-0.86632,166.57 |
| 19040 | | |
| 19041 | | > ui mousemode right "translate selected models" |
| 19042 | | |
| 19043 | | > view matrix models |
| 19044 | | > #19,0.86803,-0.087693,0.4887,146.53,-0.15732,-0.98214,0.1032,116,0.47093,-0.16647,-0.86632,165.79 |
| 19045 | | |
| 19046 | | > view matrix models |
| 19047 | | > #19,0.86803,-0.087693,0.4887,145.14,-0.15732,-0.98214,0.1032,109.54,0.47093,-0.16647,-0.86632,162 |
| 19048 | | |
| 19049 | | > fitmap #19 inMap #15 |
| 19050 | | |
| 19051 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19052 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19053 | | average map value = 0.05938, steps = 116 |
| 19054 | | shifted from previous position = 2.57 |
| 19055 | | rotated from previous position = 8.66 degrees |
| 19056 | | atoms outside contour = 2965, contour level = 0.17454 |
| 19057 | | |
| 19058 | | Position of ranked_4-2.pdb (#19) relative to |
| 19059 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19060 | | Matrix rotation and translation |
| 19061 | | 0.96104033 -0.20094003 0.18980143 142.58068341 |
| 19062 | | -0.05358713 -0.80908903 -0.58523786 126.95846747 |
| 19063 | | 0.27116397 0.55226628 -0.78833499 178.14670225 |
| 19064 | | Axis 0.98922813 -0.07075677 0.12814515 |
| 19065 | | Axis point 0.00000000 43.27750343 101.88190147 |
| 19066 | | Rotation angle (degrees) 144.90419798 |
| 19067 | | Shift along axis 154.89028809 |
| 19068 | | |
| 19069 | | |
| 19070 | | > view matrix models |
| 19071 | | > #19,0.84445,0.054728,0.53284,139.29,-0.045076,-0.98398,0.1725,115.47,0.53374,-0.16969,-0.82845,165.54 |
| 19072 | | |
| 19073 | | > fitmap #19 inMap #15 |
| 19074 | | |
| 19075 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19076 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19077 | | average map value = 0.06123, steps = 116 |
| 19078 | | shifted from previous position = 1.73 |
| 19079 | | rotated from previous position = 7.76 degrees |
| 19080 | | atoms outside contour = 2991, contour level = 0.17454 |
| 19081 | | |
| 19082 | | Position of ranked_4-2.pdb (#19) relative to |
| 19083 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19084 | | Matrix rotation and translation |
| 19085 | | 0.96999882 -0.20181047 0.13555374 139.89934227 |
| 19086 | | -0.11197025 -0.86578488 -0.48772861 135.53299132 |
| 19087 | | 0.21578912 0.45791819 -0.86240709 179.71130357 |
| 19088 | | Axis 0.99198501 -0.08416704 0.09424253 |
| 19089 | | Axis point 0.00000000 52.46373809 102.09128818 |
| 19090 | | Rotation angle (degrees) 151.53357510 |
| 19091 | | Shift along axis 144.30708721 |
| 19092 | | |
| 19093 | | |
| 19094 | | > ui mousemode right "rotate selected models" |
| 19095 | | |
| 19096 | | > view matrix models |
| 19097 | | > #19,0.58739,0.29655,0.75301,135.78,0.041228,-0.9402,0.33811,114.77,0.80825,-0.16756,-0.56449,164.47 |
| 19098 | | |
| 19099 | | > volume #15 level 0.06163 |
| 19100 | | |
| 19101 | | > fitmap #19 inMap #15 |
| 19102 | | |
| 19103 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19104 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19105 | | average map value = 0.05898, steps = 88 |
| 19106 | | shifted from previous position = 1.14 |
| 19107 | | rotated from previous position = 5.55 degrees |
| 19108 | | atoms outside contour = 2110, contour level = 0.06163 |
| 19109 | | |
| 19110 | | Position of ranked_4-2.pdb (#19) relative to |
| 19111 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19112 | | Matrix rotation and translation |
| 19113 | | 0.89831881 0.02953825 0.43835010 137.72979763 |
| 19114 | | 0.22916514 -0.88275837 -0.41014754 135.60407165 |
| 19115 | | 0.37484218 0.46889781 -0.79976758 180.72614387 |
| 19116 | | Axis 0.97275909 0.07027841 0.22090882 |
| 19117 | | Axis point 0.00000000 45.61771762 89.78629158 |
| 19118 | | Rotation angle (degrees) 153.13878258 |
| 19119 | | Shift along axis 183.43194910 |
| 19120 | | |
| 19121 | | |
| 19122 | | > view matrix models |
| 19123 | | > #19,0.685,0.27685,0.67389,135.64,0.029919,-0.9349,0.35366,113.72,0.72793,-0.22209,-0.64869,165.05 |
| 19124 | | |
| 19125 | | > ui mousemode right "translate selected models" |
| 19126 | | |
| 19127 | | > view matrix models |
| 19128 | | > #19,0.685,0.27685,0.67389,131.88,0.029919,-0.9349,0.35366,107.91,0.72793,-0.22209,-0.64869,163.38 |
| 19129 | | |
| 19130 | | > fitmap #19 inMap #15 |
| 19131 | | |
| 19132 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19133 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19134 | | average map value = 0.06106, steps = 116 |
| 19135 | | shifted from previous position = 6.87 |
| 19136 | | rotated from previous position = 14.8 degrees |
| 19137 | | atoms outside contour = 2047, contour level = 0.06163 |
| 19138 | | |
| 19139 | | Position of ranked_4-2.pdb (#19) relative to |
| 19140 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19141 | | Matrix rotation and translation |
| 19142 | | 0.96747666 -0.13027897 0.21683242 137.89048963 |
| 19143 | | -0.03378844 -0.91605320 -0.39963091 130.11812608 |
| 19144 | | 0.25069353 0.37930716 -0.89066202 180.23266024 |
| 19145 | | Axis 0.99149251 -0.04310104 0.12282059 |
| 19146 | | Axis point 0.00000000 51.39974031 95.68460772 |
| 19147 | | Rotation angle (degrees) 156.87048666 |
| 19148 | | Shift along axis 153.24544283 |
| 19149 | | |
| 19150 | | |
| 19151 | | > view matrix models |
| 19152 | | > #19,0.8456,0.18919,0.49917,135.14,-0.015902,-0.92575,0.37781,109.38,0.53358,-0.32741,-0.7798,165.97 |
| 19153 | | |
| 19154 | | > fitmap #19 inMap #15 |
| 19155 | | |
| 19156 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19157 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19158 | | average map value = 0.0589, steps = 60 |
| 19159 | | shifted from previous position = 0.856 |
| 19160 | | rotated from previous position = 6.4 degrees |
| 19161 | | atoms outside contour = 2129, contour level = 0.06163 |
| 19162 | | |
| 19163 | | Position of ranked_4-2.pdb (#19) relative to |
| 19164 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19165 | | Matrix rotation and translation |
| 19166 | | 0.97664487 -0.05582514 0.20748096 137.10942791 |
| 19167 | | 0.01168804 -0.95042318 -0.31073969 133.56333843 |
| 19168 | | 0.21454180 0.30590737 -0.92757344 183.76348542 |
| 19169 | | Axis 0.99399555 -0.01138162 0.10882692 |
| 19170 | | Axis point 0.00000000 54.21503982 95.20038403 |
| 19171 | | Rotation angle (degrees) 161.92955838 |
| 19172 | | Shift along axis 154.76440790 |
| 19173 | | |
| 19174 | | |
| 19175 | | > view matrix models |
| 19176 | | > #19,0.84143,0.28193,0.461,137.61,0.042541,-0.88502,0.4636,111.68,0.5387,-0.37047,-0.75668,162.17 |
| 19177 | | |
| 19178 | | > fitmap #19 inMap #15 |
| 19179 | | |
| 19180 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19181 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19182 | | average map value = 0.06379, steps = 92 |
| 19183 | | shifted from previous position = 1.97 |
| 19184 | | rotated from previous position = 8.53 degrees |
| 19185 | | atoms outside contour = 2029, contour level = 0.06163 |
| 19186 | | |
| 19187 | | Position of ranked_4-2.pdb (#19) relative to |
| 19188 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19189 | | Matrix rotation and translation |
| 19190 | | 0.99381823 -0.00263232 0.11098822 139.94892720 |
| 19191 | | 0.02119994 -0.97682277 -0.21299729 132.05531301 |
| 19192 | | 0.10897649 0.21403353 -0.97072847 179.88226429 |
| 19193 | | Axis 0.99843525 0.00470358 0.05572188 |
| 19194 | | Axis point 0.00000000 56.40718894 93.15141532 |
| 19195 | | Rotation angle (degrees) 167.65193016 |
| 19196 | | Shift along axis 150.37445364 |
| 19197 | | |
| 19198 | | |
| 19199 | | > view matrix models |
| 19200 | | > #19,0.87007,0.35526,0.3417,131.5,0.1254,-0.82994,0.54357,72.707,0.4767,-0.4301,-0.76666,177.22 |
| 19201 | | |
| 19202 | | > view matrix models |
| 19203 | | > #19,0.87007,0.35526,0.3417,131.83,0.1254,-0.82994,0.54357,71.304,0.4767,-0.4301,-0.76666,176.32 |
| 19204 | | |
| 19205 | | > volume #15 level 0.09174 |
| 19206 | | |
| 19207 | | > volume #15 step 4 |
| 19208 | | |
| 19209 | | > volume #15 step 2 |
| 19210 | | |
| 19211 | | > view matrix models |
| 19212 | | > #19,0.87007,0.35526,0.3417,131.23,0.1254,-0.82994,0.54357,72.803,0.4767,-0.4301,-0.76666,177.65 |
| 19213 | | |
| 19214 | | > select add #15 |
| 19215 | | |
| 19216 | | 3495 atoms, 3537 bonds, 233 residues, 3 models selected |
| 19217 | | |
| 19218 | | > select subtract #19 |
| 19219 | | |
| 19220 | | 2 models selected |
| 19221 | | |
| 19222 | | > view matrix models |
| 19223 | | > #15,0.90168,-0.40137,-0.16084,95.746,0.18714,0.69759,-0.69163,114.99,0.3898,0.59353,0.70411,-98.316 |
| 19224 | | |
| 19225 | | > ui mousemode right "translate selected models" |
| 19226 | | |
| 19227 | | > ui mousemode right "rotate selected models" |
| 19228 | | |
| 19229 | | > view matrix models |
| 19230 | | > #15,-0.62785,0.57216,-0.52767,212.78,-0.51806,-0.81316,-0.26531,373.99,-0.58088,0.10679,0.80695,91.535 |
| 19231 | | |
| 19232 | | > select add #19 |
| 19233 | | |
| 19234 | | 3495 atoms, 3537 bonds, 233 residues, 3 models selected |
| 19235 | | |
| 19236 | | > select subtract #15 |
| 19237 | | |
| 19238 | | 3495 atoms, 3537 bonds, 233 residues, 1 model selected |
| 19239 | | |
| 19240 | | > view matrix models |
| 19241 | | > #19,0.93048,0.22796,0.28676,131.44,0.024736,-0.82011,0.57167,72.455,0.36549,-0.52484,-0.76874,177.26 |
| 19242 | | |
| 19243 | | > ui mousemode right "translate selected models" |
| 19244 | | |
| 19245 | | > view matrix models |
| 19246 | | > #19,0.93048,0.22796,0.28676,147.42,0.024736,-0.82011,0.57167,107.23,0.36549,-0.52484,-0.76874,142.54 |
| 19247 | | |
| 19248 | | > view matrix models |
| 19249 | | > #19,0.93048,0.22796,0.28676,144.18,0.024736,-0.82011,0.57167,99.546,0.36549,-0.52484,-0.76874,149.55 |
| 19250 | | |
| 19251 | | > ui mousemode right "rotate selected models" |
| 19252 | | |
| 19253 | | > view matrix models |
| 19254 | | > #19,-0.0024151,0.28942,0.9572,138.54,-0.80331,-0.57064,0.17051,100.64,0.59556,-0.76851,0.23387,143.79 |
| 19255 | | |
| 19256 | | > view matrix models |
| 19257 | | > #19,-0.81115,0.57966,0.077685,142.51,-0.54966,-0.71022,-0.43983,104.41,-0.19978,-0.39947,0.89471,139.06 |
| 19258 | | |
| 19259 | | > view matrix models |
| 19260 | | > #19,0.49046,0.2443,-0.83652,149.79,-0.35548,-0.82033,-0.44799,104.64,-0.79566,0.51709,-0.3155,146.54 |
| 19261 | | |
| 19262 | | > view matrix models |
| 19263 | | > #19,-0.88973,-0.43163,0.1486,140.04,-0.31592,0.81719,0.48208,102.44,-0.32951,0.38197,-0.86343,150.39 |
| 19264 | | |
| 19265 | | > view matrix models |
| 19266 | | > #19,-0.54722,-0.5042,0.66808,137.61,-0.3292,0.86352,0.38205,103.07,-0.76953,-0.010867,-0.63852,147.46 |
| 19267 | | |
| 19268 | | > ui mousemode right "translate selected models" |
| 19269 | | |
| 19270 | | > view matrix models |
| 19271 | | > #19,-0.54722,-0.5042,0.66808,128.87,-0.3292,0.86352,0.38205,87.958,-0.76953,-0.010867,-0.63852,166.51 |
| 19272 | | |
| 19273 | | > view matrix models |
| 19274 | | > #19,-0.54722,-0.5042,0.66808,126.54,-0.3292,0.86352,0.38205,89.685,-0.76953,-0.010867,-0.63852,171.66 |
| 19275 | | |
| 19276 | | > ui mousemode right rotate |
| 19277 | | |
| 19278 | | > ui mousemode right "rotate selected models" |
| 19279 | | |
| 19280 | | > view matrix models |
| 19281 | | > #19,-0.32491,-0.096668,0.94079,126.19,0.12136,0.98228,0.14284,92.2,-0.93792,0.16059,-0.30742,169.73 |
| 19282 | | |
| 19283 | | > view matrix models |
| 19284 | | > #19,-0.36346,-0.099882,0.92624,126.19,0.11193,0.98235,0.14986,92.14,-0.92486,0.15815,-0.34587,169.97 |
| 19285 | | |
| 19286 | | > view matrix models |
| 19287 | | > #19,-0.55876,-0.16857,0.81202,126.32,0.0088716,0.97785,0.20911,91.581,-0.82928,0.12404,-0.54489,171.25 |
| 19288 | | |
| 19289 | | > view matrix models |
| 19290 | | > #19,-0.80873,-0.09834,0.5799,127.28,0.047215,0.97189,0.23066,91.524,-0.58628,0.21392,-0.78135,173.27 |
| 19291 | | |
| 19292 | | > view matrix models |
| 19293 | | > #19,-0.99636,-0.014248,-0.084056,130.88,-0.026992,0.98794,0.15248,91.854,0.08087,0.15419,-0.98473,175.69 |
| 19294 | | |
| 19295 | | > view matrix models |
| 19296 | | > #19,-0.99782,-0.024519,-0.061308,130.73,-0.033254,0.98876,0.14579,91.881,0.057045,0.14751,-0.98741,175.64 |
| 19297 | | |
| 19298 | | > view matrix models |
| 19299 | | > #19,-0.89626,0.011779,0.44338,128.1,0.10042,0.97908,0.17698,91.955,-0.43202,0.20314,-0.87869,174.13 |
| 19300 | | |
| 19301 | | > view matrix models |
| 19302 | | > #19,-0.35352,-0.16762,0.92029,126.12,-0.011726,0.98453,0.17481,91.75,-0.93536,0.051008,-0.35001,169.78 |
| 19303 | | |
| 19304 | | > view matrix models |
| 19305 | | > #19,-0.23866,-0.32129,0.91641,126.08,-0.27763,0.92687,0.25265,90.653,-0.93057,-0.19413,-0.31041,169.1 |
| 19306 | | |
| 19307 | | > view matrix models |
| 19308 | | > #19,-0.29279,-0.15948,0.94278,126.13,-0.14122,0.98239,0.12232,91.785,-0.94569,-0.097325,-0.31016,169.25 |
| 19309 | | |
| 19310 | | > ui mousemode right "move picked models" |
| 19311 | | |
| 19312 | | > ui mousemode right "translate selected models" |
| 19313 | | |
| 19314 | | > view matrix models |
| 19315 | | > #19,-0.29279,-0.15948,0.94278,122.78,-0.14122,0.98239,0.12232,145.38,-0.94569,-0.097325,-0.31016,179.07 |
| 19316 | | |
| 19317 | | > view matrix models |
| 19318 | | > #19,-0.29279,-0.15948,0.94278,117.85,-0.14122,0.98239,0.12232,152.87,-0.94569,-0.097325,-0.31016,181.99 |
| 19319 | | |
| 19320 | | > ui mousemode right "rotate selected models" |
| 19321 | | |
| 19322 | | > view matrix models |
| 19323 | | > #19,0.033188,-0.33531,0.94152,118.19,-0.32261,0.88802,0.32763,151.14,-0.94595,-0.31462,-0.078702,180.25 |
| 19324 | | |
| 19325 | | > view matrix models |
| 19326 | | > #19,-0.088423,-0.38961,0.91672,117.98,-0.35704,0.87157,0.33598,150.99,-0.92989,-0.2976,-0.21618,181.11 |
| 19327 | | |
| 19328 | | > ui mousemode right "translate selected models" |
| 19329 | | |
| 19330 | | > view matrix models |
| 19331 | | > #19,-0.088423,-0.38961,0.91672,118.34,-0.35704,0.87157,0.33598,153.04,-0.92989,-0.2976,-0.21618,180.09 |
| 19332 | | |
| 19333 | | > fitmap #19 inMap #15 |
| 19334 | | |
| 19335 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19336 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19337 | | average map value = 0.0747, steps = 184 |
| 19338 | | shifted from previous position = 13.3 |
| 19339 | | rotated from previous position = 17 degrees |
| 19340 | | atoms outside contour = 2290, contour level = 0.09174 |
| 19341 | | |
| 19342 | | Position of ranked_4-2.pdb (#19) relative to |
| 19343 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19344 | | Matrix rotation and translation |
| 19345 | | 0.70849005 -0.30468801 -0.63655876 134.64119771 |
| 19346 | | -0.11344666 -0.93943893 0.32339504 130.24939742 |
| 19347 | | -0.69654267 -0.15690670 -0.70014898 180.30393550 |
| 19348 | | Axis -0.92287069 0.11525545 0.36745866 |
| 19349 | | Axis point 0.00000000 87.59816517 107.25902679 |
| 19350 | | Rotation angle (degrees) 164.91678965 |
| 19351 | | Shift along axis -42.99021975 |
| 19352 | | |
| 19353 | | |
| 19354 | | > view matrix models |
| 19355 | | > #19,-0.14219,-0.26342,0.95414,109.67,-0.089988,0.96339,0.25256,151.11,-0.98574,-0.04995,-0.16069,170.25 |
| 19356 | | |
| 19357 | | > volume #15 step 8 |
| 19358 | | |
| 19359 | | > view matrix models |
| 19360 | | > #19,-0.14219,-0.26342,0.95414,110.05,-0.089988,0.96339,0.25256,152.78,-0.98574,-0.04995,-0.16069,169.6 |
| 19361 | | |
| 19362 | | > ui mousemode right "rotate selected models" |
| 19363 | | |
| 19364 | | > view matrix models |
| 19365 | | > #19,0.0436,-0.21573,0.97548,110.39,-0.13784,0.96577,0.21974,152.88,-0.98949,-0.14404,0.012372,168.42 |
| 19366 | | |
| 19367 | | > view matrix models |
| 19368 | | > #19,0.079816,-0.12434,0.98902,110.56,-0.063107,0.98957,0.1295,153.59,-0.99481,-0.072751,0.071136,168.2 |
| 19369 | | |
| 19370 | | > ui mousemode right translate |
| 19371 | | |
| 19372 | | > ui mousemode right "translate selected models" |
| 19373 | | |
| 19374 | | > view matrix models |
| 19375 | | > #19,0.079816,-0.12434,0.98902,109.36,-0.063107,0.98957,0.1295,152.62,-0.99481,-0.072751,0.071136,169.73 |
| 19376 | | |
| 19377 | | > volume #15 step 4 |
| 19378 | | |
| 19379 | | > fitmap #19 inMap #15 |
| 19380 | | |
| 19381 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19382 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19383 | | average map value = 0.07613, steps = 128 |
| 19384 | | shifted from previous position = 3.05 |
| 19385 | | rotated from previous position = 13.1 degrees |
| 19386 | | atoms outside contour = 2287, contour level = 0.09174 |
| 19387 | | |
| 19388 | | Position of ranked_4-2.pdb (#19) relative to |
| 19389 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19390 | | Matrix rotation and translation |
| 19391 | | 0.70458283 -0.43337355 -0.56191672 132.01518685 |
| 19392 | | -0.10641338 -0.84742619 0.52013945 130.83167996 |
| 19393 | | -0.70159762 -0.30668586 -0.64319869 174.90380772 |
| 19394 | | Axis -0.91866428 0.15519585 0.36327701 |
| 19395 | | Axis point 0.00000000 100.95641892 95.87460191 |
| 19396 | | Rotation angle (degrees) 153.25535729 |
| 19397 | | Shift along axis -37.43457093 |
| 19398 | | |
| 19399 | | |
| 19400 | | > volume #15 step 2 |
| 19401 | | |
| 19402 | | > fitmap #19 inMap #15 |
| 19403 | | |
| 19404 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19405 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19406 | | average map value = 0.07613, steps = 48 |
| 19407 | | shifted from previous position = 0.0206 |
| 19408 | | rotated from previous position = 0.0474 degrees |
| 19409 | | atoms outside contour = 2292, contour level = 0.09174 |
| 19410 | | |
| 19411 | | Position of ranked_4-2.pdb (#19) relative to |
| 19412 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19413 | | Matrix rotation and translation |
| 19414 | | 0.70502177 -0.43345142 -0.56130576 132.00642406 |
| 19415 | | -0.10688490 -0.84738249 0.52011397 130.81984848 |
| 19416 | | -0.70108481 -0.30669656 -0.64375252 174.88937950 |
| 19417 | | Axis -0.91879207 0.15532928 0.36289661 |
| 19418 | | Axis point 0.00000000 100.94946065 95.83984282 |
| 19419 | | Rotation angle (degrees) 153.25988901 |
| 19420 | | Shift along axis -37.49954066 |
| 19421 | | |
| 19422 | | |
| 19423 | | > volume #15 step 1 |
| 19424 | | |
| 19425 | | > fitmap #19 inMap #15 |
| 19426 | | |
| 19427 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19428 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19429 | | average map value = 0.07613, steps = 44 |
| 19430 | | shifted from previous position = 0.00884 |
| 19431 | | rotated from previous position = 0.0332 degrees |
| 19432 | | atoms outside contour = 2215, contour level = 0.09174 |
| 19433 | | |
| 19434 | | Position of ranked_4-2.pdb (#19) relative to |
| 19435 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19436 | | Matrix rotation and translation |
| 19437 | | 0.70502523 -0.43361857 -0.56117231 132.00848777 |
| 19438 | | -0.10741041 -0.84745596 0.51988595 130.82811476 |
| 19439 | | -0.70100102 -0.30625696 -0.64405298 174.88677925 |
| 19440 | | Axis -0.91880136 0.15551160 0.36279499 |
| 19441 | | Axis point 0.00000000 100.94320708 95.84585728 |
| 19442 | | Rotation angle (degrees) 153.28348719 |
| 19443 | | Shift along axis -37.49624152 |
| 19444 | | |
| 19445 | | |
| 19446 | | > volume #15 level 0.06916 |
| 19447 | | |
| 19448 | | > fitmap #19 inMap #15 |
| 19449 | | |
| 19450 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19451 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19452 | | average map value = 0.07612, steps = 44 |
| 19453 | | shifted from previous position = 0.0207 |
| 19454 | | rotated from previous position = 0.0815 degrees |
| 19455 | | atoms outside contour = 1993, contour level = 0.069157 |
| 19456 | | |
| 19457 | | Position of ranked_4-2.pdb (#19) relative to |
| 19458 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19459 | | Matrix rotation and translation |
| 19460 | | 0.70447810 -0.43332045 -0.56208895 132.01781762 |
| 19461 | | -0.10631210 -0.84747342 0.52008320 130.83476713 |
| 19462 | | -0.70171813 -0.30663036 -0.64309368 174.90399315 |
| 19463 | | Axis -0.91863523 0.15515445 0.36336816 |
| 19464 | | Axis point 0.00000000 100.95338460 95.88413237 |
| 19465 | | Rotation angle (degrees) 153.25834639 |
| 19466 | | Shift along axis -37.42207941 |
| 19467 | | |
| 19468 | | |
| 19469 | | > view matrix models |
| 19470 | | > #19,-0.13286,-0.051033,0.98982,110.56,-0.092338,0.99497,0.038905,154.52,-0.98682,-0.08623,-0.1369,171.96 |
| 19471 | | |
| 19472 | | > view matrix models |
| 19473 | | > #19,-0.13286,-0.051033,0.98982,112.37,-0.092338,0.99497,0.038905,152.82,-0.98682,-0.08623,-0.1369,169.74 |
| 19474 | | |
| 19475 | | > fitmap #19 inMap #15 |
| 19476 | | |
| 19477 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19478 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19479 | | average map value = 0.07614, steps = 56 |
| 19480 | | shifted from previous position = 0.232 |
| 19481 | | rotated from previous position = 0.087 degrees |
| 19482 | | atoms outside contour = 1998, contour level = 0.069157 |
| 19483 | | |
| 19484 | | Position of ranked_4-2.pdb (#19) relative to |
| 19485 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19486 | | Matrix rotation and translation |
| 19487 | | 0.70517041 -0.43348409 -0.56109378 132.00627217 |
| 19488 | | -0.10735399 -0.84749712 0.51983051 130.82636648 |
| 19489 | | -0.70086362 -0.30633344 -0.64416613 174.88537519 |
| 19490 | | Axis -0.91884329 0.15544927 0.36271549 |
| 19491 | | Axis point 0.00000000 100.93616372 95.83902192 |
| 19492 | | Rotation angle (degrees) 153.28406903 |
| 19493 | | Shift along axis -37.52258038 |
| 19494 | | |
| 19495 | | |
| 19496 | | > ui mousemode right "rotate selected models" |
| 19497 | | |
| 19498 | | > view matrix models |
| 19499 | | > #19,0.045164,-0.10735,0.9932,112.71,-0.25978,0.95874,0.11544,151.97,-0.96461,-0.26323,0.015413,168.78 |
| 19500 | | |
| 19501 | | > view matrix models |
| 19502 | | > #19,-0.30213,-0.1389,0.94309,112.24,-0.14772,0.9842,0.097634,152.35,-0.94175,-0.10981,-0.31788,171.03 |
| 19503 | | |
| 19504 | | > ui mousemode right "translate selected models" |
| 19505 | | |
| 19506 | | > view matrix models |
| 19507 | | > #19,-0.30213,-0.1389,0.94309,107.73,-0.14772,0.9842,0.097634,151.86,-0.94175,-0.10981,-0.31788,173.47 |
| 19508 | | |
| 19509 | | > fitmap #19 inMap #15 |
| 19510 | | |
| 19511 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19512 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19513 | | average map value = 0.07755, steps = 152 |
| 19514 | | shifted from previous position = 2.66 |
| 19515 | | rotated from previous position = 12.2 degrees |
| 19516 | | atoms outside contour = 1979, contour level = 0.069157 |
| 19517 | | |
| 19518 | | Position of ranked_4-2.pdb (#19) relative to |
| 19519 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19520 | | Matrix rotation and translation |
| 19521 | | 0.71028791 -0.53276812 -0.46005348 134.72845017 |
| 19522 | | -0.32532625 -0.82803782 0.45663574 131.30850464 |
| 19523 | | -0.62422264 -0.17467537 -0.76146871 179.33852331 |
| 19524 | | Axis -0.92229810 0.23983882 0.30305700 |
| 19525 | | Axis point 0.00000000 101.44105946 98.36214790 |
| 19526 | | Rotation angle (degrees) 159.98604860 |
| 19527 | | Shift along axis -38.41712211 |
| 19528 | | |
| 19529 | | |
| 19530 | | > view matrix models |
| 19531 | | > #19,-0.30271,-0.047103,0.95192,109.09,0.062185,0.99567,0.069043,148.19,-0.95105,0.080095,-0.29847,171.63 |
| 19532 | | |
| 19533 | | > view matrix models |
| 19534 | | > #19,-0.30271,-0.047103,0.95192,109.53,0.062185,0.99567,0.069043,151.8,-0.95105,0.080095,-0.29847,171.75 |
| 19535 | | |
| 19536 | | > fitmap #19 inMap #15 |
| 19537 | | |
| 19538 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19539 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19540 | | average map value = 0.07756, steps = 144 |
| 19541 | | shifted from previous position = 2.14 |
| 19542 | | rotated from previous position = 0.00555 degrees |
| 19543 | | atoms outside contour = 1977, contour level = 0.069157 |
| 19544 | | |
| 19545 | | Position of ranked_4-2.pdb (#19) relative to |
| 19546 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19547 | | Matrix rotation and translation |
| 19548 | | 0.71022153 -0.53281148 -0.46010576 134.73118570 |
| 19549 | | -0.32533840 -0.82801663 0.45666550 131.30036123 |
| 19550 | | -0.62429184 -0.17464360 -0.76141927 179.34027698 |
| 19551 | | Axis -0.92227946 0.23985945 0.30309741 |
| 19552 | | Axis point 0.00000000 101.43997397 98.36725677 |
| 19553 | | Rotation angle (degrees) 159.98569306 |
| 19554 | | Shift along axis -38.40859882 |
| 19555 | | |
| 19556 | | |
| 19557 | | > ui mousemode right "rotate selected models" |
| 19558 | | |
| 19559 | | > view matrix models |
| 19560 | | > #19,-0.23924,0.15835,0.95796,109.16,0.47624,0.87892,-0.026355,151.01,-0.84615,0.44991,-0.28568,172.85 |
| 19561 | | |
| 19562 | | > fitmap #19 inMap #15 |
| 19563 | | |
| 19564 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19565 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19566 | | average map value = 0.07737, steps = 76 |
| 19567 | | shifted from previous position = 2.25 |
| 19568 | | rotated from previous position = 4.41 degrees |
| 19569 | | atoms outside contour = 2022, contour level = 0.069157 |
| 19570 | | |
| 19571 | | Position of ranked_4-2.pdb (#19) relative to |
| 19572 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19573 | | Matrix rotation and translation |
| 19574 | | 0.44978868 -0.77765383 -0.43925467 133.03369344 |
| 19575 | | -0.60943984 -0.62675644 0.48555066 132.01767497 |
| 19576 | | -0.65289602 0.04930410 -0.75584118 177.63935846 |
| 19577 | | Axis -0.84864258 0.41560247 0.32723135 |
| 19578 | | Axis point 0.00000000 112.26149132 104.30456364 |
| 19579 | | Rotation angle (degrees) 165.10632650 |
| 19580 | | Shift along axis 0.09798202 |
| 19581 | | |
| 19582 | | |
| 19583 | | > view matrix models |
| 19584 | | > #19,-0.28945,-0.17724,0.94064,110.59,-0.17693,0.97568,0.1294,148.94,-0.9407,-0.12897,-0.31377,170.55 |
| 19585 | | |
| 19586 | | > fitmap #19 inMap #15 |
| 19587 | | |
| 19588 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19589 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19590 | | average map value = 0.07398, steps = 104 |
| 19591 | | shifted from previous position = 2.08 |
| 19592 | | rotated from previous position = 8.84 degrees |
| 19593 | | atoms outside contour = 2008, contour level = 0.069157 |
| 19594 | | |
| 19595 | | Position of ranked_4-2.pdb (#19) relative to |
| 19596 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19597 | | Matrix rotation and translation |
| 19598 | | 0.84036605 -0.40376122 -0.36160998 133.70539652 |
| 19599 | | -0.25008095 -0.88072887 0.40221409 134.35376926 |
| 19600 | | -0.48087880 -0.24757530 -0.84110763 176.24983722 |
| 19601 | | Axis -0.95799041 0.17583911 0.22657223 |
| 19602 | | Axis point 0.00000000 96.85626900 90.64730319 |
| 19603 | | Rotation angle (degrees) 160.17539700 |
| 19604 | | Shift along axis -64.53052188 |
| 19605 | | |
| 19606 | | |
| 19607 | | > view matrix models |
| 19608 | | > #19,-0.40732,-0.32026,0.85529,112.61,-0.48374,0.87,0.095389,147.65,-0.77465,-0.37488,-0.50929,170.59 |
| 19609 | | |
| 19610 | | > fitmap #19 inMap #15 |
| 19611 | | |
| 19612 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19613 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19614 | | average map value = 0.07017, steps = 160 |
| 19615 | | shifted from previous position = 4.38 |
| 19616 | | rotated from previous position = 8.17 degrees |
| 19617 | | atoms outside contour = 2071, contour level = 0.069157 |
| 19618 | | |
| 19619 | | Position of ranked_4-2.pdb (#19) relative to |
| 19620 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19621 | | Matrix rotation and translation |
| 19622 | | 0.96590678 -0.14882220 -0.21183967 134.73738539 |
| 19623 | | -0.05093092 -0.91150349 0.40812674 130.88544110 |
| 19624 | | -0.25383092 -0.38342319 -0.88800705 177.12345232 |
| 19625 | | Axis -0.99106684 0.05257550 0.12256561 |
| 19626 | | Axis point 0.00000000 88.98559805 82.55622297 |
| 19627 | | Rotation angle (degrees) 156.46292778 |
| 19628 | | Shift along axis -104.94314331 |
| 19629 | | |
| 19630 | | |
| 19631 | | > fitmap #19 inMap #15 |
| 19632 | | |
| 19633 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19634 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19635 | | average map value = 0.07017, steps = 160 |
| 19636 | | shifted from previous position = 4.38 |
| 19637 | | rotated from previous position = 8.17 degrees |
| 19638 | | atoms outside contour = 2071, contour level = 0.069157 |
| 19639 | | |
| 19640 | | Position of ranked_4-2.pdb (#19) relative to |
| 19641 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19642 | | Matrix rotation and translation |
| 19643 | | 0.96590678 -0.14882220 -0.21183967 134.73738539 |
| 19644 | | -0.05093092 -0.91150349 0.40812674 130.88544110 |
| 19645 | | -0.25383092 -0.38342319 -0.88800705 177.12345232 |
| 19646 | | Axis -0.99106684 0.05257550 0.12256561 |
| 19647 | | Axis point 0.00000000 88.98559805 82.55622297 |
| 19648 | | Rotation angle (degrees) 156.46292778 |
| 19649 | | Shift along axis -104.94314331 |
| 19650 | | |
| 19651 | | |
| 19652 | | > view matrix models |
| 19653 | | > #19,-0.5046,-0.21888,0.83514,109.62,-0.37778,0.92578,0.014381,150.8,-0.77631,-0.30824,-0.54984,170.19 |
| 19654 | | |
| 19655 | | > ui mousemode right "translate selected models" |
| 19656 | | |
| 19657 | | > view matrix models |
| 19658 | | > #19,-0.5046,-0.21888,0.83514,113.58,-0.37778,0.92578,0.014381,157.26,-0.77631,-0.30824,-0.54984,168.64 |
| 19659 | | |
| 19660 | | > fitmap #19 inMap #15 |
| 19661 | | |
| 19662 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19663 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19664 | | average map value = 0.06866, steps = 120 |
| 19665 | | shifted from previous position = 3.91 |
| 19666 | | rotated from previous position = 14.1 degrees |
| 19667 | | atoms outside contour = 2067, contour level = 0.069157 |
| 19668 | | |
| 19669 | | Position of ranked_4-2.pdb (#19) relative to |
| 19670 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19671 | | Matrix rotation and translation |
| 19672 | | 0.96247291 -0.27112044 -0.01181526 133.26152818 |
| 19673 | | -0.22767769 -0.83041229 0.50850595 126.66115781 |
| 19674 | | -0.14767789 -0.48673313 -0.86097741 173.30164244 |
| 19675 | | Axis -0.98988504 0.13513174 0.04320904 |
| 19676 | | Axis point -0.00000000 96.65994258 70.33442936 |
| 19677 | | Rotation angle (degrees) 149.82091809 |
| 19678 | | Shift along axis -107.30945352 |
| 19679 | | |
| 19680 | | |
| 19681 | | > volume #15 level 0.2159 |
| 19682 | | |
| 19683 | | > view matrix models |
| 19684 | | > #19,-0.65663,-0.048074,0.75268,112.12,-0.2743,0.94485,-0.17895,157.15,-0.70256,-0.32396,-0.6336,166.52 |
| 19685 | | |
| 19686 | | > fitmap #19 inMap #15 |
| 19687 | | |
| 19688 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19689 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19690 | | average map value = 0.06866, steps = 80 |
| 19691 | | shifted from previous position = 2.5 |
| 19692 | | rotated from previous position = 0.0204 degrees |
| 19693 | | atoms outside contour = 2960, contour level = 0.21595 |
| 19694 | | |
| 19695 | | Position of ranked_4-2.pdb (#19) relative to |
| 19696 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19697 | | Matrix rotation and translation |
| 19698 | | 0.96246824 -0.27114460 -0.01164036 133.26039199 |
| 19699 | | -0.22782937 -0.83053335 0.50824023 126.66310985 |
| 19700 | | -0.14747430 -0.48651306 -0.86113667 173.30701515 |
| 19701 | | Axis -0.98988455 0.13516911 0.04310322 |
| 19702 | | Axis point 0.00000000 96.64896081 70.33977268 |
| 19703 | | Rotation angle (degrees) 149.83716387 |
| 19704 | | Shift along axis -107.32137218 |
| 19705 | | |
| 19706 | | |
| 19707 | | > volume #15 level 0.04281 |
| 19708 | | |
| 19709 | | > volume #15 level 0.07668 |
| 19710 | | |
| 19711 | | > fitmap #19 inMap #15 |
| 19712 | | |
| 19713 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19714 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19715 | | average map value = 0.06865, steps = 64 |
| 19716 | | shifted from previous position = 0.0203 |
| 19717 | | rotated from previous position = 0.0575 degrees |
| 19718 | | atoms outside contour = 2152, contour level = 0.076685 |
| 19719 | | |
| 19720 | | Position of ranked_4-2.pdb (#19) relative to |
| 19721 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19722 | | Matrix rotation and translation |
| 19723 | | 0.96248833 -0.27106842 -0.01175290 133.26271968 |
| 19724 | | -0.22756230 -0.83008341 0.50909423 126.65652583 |
| 19725 | | -0.14775526 -0.48732273 -0.86063054 173.28782659 |
| 19726 | | Axis -0.98988733 0.13511112 0.04322101 |
| 19727 | | Axis point 0.00000000 96.68767506 70.30298864 |
| 19728 | | Rotation angle (degrees) 149.78155402 |
| 19729 | | Shift along axis -107.31269776 |
| 19730 | | |
| 19731 | | |
| 19732 | | > view matrix models |
| 19733 | | > #19,-0.65653,-0.047608,0.75279,110.01,-0.27438,0.94471,-0.17955,154,-0.70262,-0.32443,-0.6333,167.36 |
| 19734 | | |
| 19735 | | > fitmap #19 inMap #15 |
| 19736 | | |
| 19737 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19738 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19739 | | average map value = 0.06866, steps = 76 |
| 19740 | | shifted from previous position = 1.99 |
| 19741 | | rotated from previous position = 0.0246 degrees |
| 19742 | | atoms outside contour = 2150, contour level = 0.076685 |
| 19743 | | |
| 19744 | | Position of ranked_4-2.pdb (#19) relative to |
| 19745 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19746 | | Matrix rotation and translation |
| 19747 | | 0.96250927 -0.27100031 -0.01160731 133.26161540 |
| 19748 | | -0.22763324 -0.83027344 0.50875252 126.66005802 |
| 19749 | | -0.14750933 -0.48703681 -0.86083456 173.29222603 |
| 19750 | | Axis -0.98989402 0.13509745 0.04311032 |
| 19751 | | Axis point -0.00000000 96.66944423 70.31135380 |
| 19752 | | Rotation angle (degrees) 149.80279770 |
| 19753 | | Shift along axis -107.33274284 |
| 19754 | | |
| 19755 | | |
| 19756 | | > view matrix models |
| 19757 | | > #19,-0.65672,-0.04791,0.75261,109.4,-0.2744,0.94475,-0.17929,156.63,-0.70244,-0.32426,-0.63358,167.97 |
| 19758 | | |
| 19759 | | > view matrix models |
| 19760 | | > #19,-0.65672,-0.04791,0.75261,110.98,-0.2744,0.94475,-0.17929,156.04,-0.70244,-0.32426,-0.63358,167.03 |
| 19761 | | |
| 19762 | | > fitmap #19 inMap #15 |
| 19763 | | |
| 19764 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19765 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19766 | | average map value = 0.06865, steps = 72 |
| 19767 | | shifted from previous position = 0.967 |
| 19768 | | rotated from previous position = 0.0159 degrees |
| 19769 | | atoms outside contour = 2148, contour level = 0.076685 |
| 19770 | | |
| 19771 | | Position of ranked_4-2.pdb (#19) relative to |
| 19772 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19773 | | Matrix rotation and translation |
| 19774 | | 0.96244076 -0.27123876 -0.01171847 133.25932541 |
| 19775 | | -0.22779296 -0.83025917 0.50870431 126.65923872 |
| 19776 | | -0.14770969 -0.48692837 -0.86086155 173.30294135 |
| 19777 | | Axis -0.98987568 0.13520489 0.04319458 |
| 19778 | | Axis point 0.00000000 96.67533121 70.32427296 |
| 19779 | | Rotation angle (degrees) 149.80742513 |
| 19780 | | Shift along axis -107.29946930 |
| 19781 | | |
| 19782 | | |
| 19783 | | > ui mousemode right translate |
| 19784 | | |
| 19785 | | [Repeated 1 time(s)] |
| 19786 | | |
| 19787 | | > ui mousemode right "translate selected atoms" |
| 19788 | | |
| 19789 | | > fitmap #19 inMap #15 |
| 19790 | | |
| 19791 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19792 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19793 | | average map value = 0.06865, steps = 92 |
| 19794 | | shifted from previous position = 2.51 |
| 19795 | | rotated from previous position = 0.0242 degrees |
| 19796 | | atoms outside contour = 2149, contour level = 0.076685 |
| 19797 | | |
| 19798 | | Position of ranked_4-2.pdb (#19) relative to |
| 19799 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19800 | | Matrix rotation and translation |
| 19801 | | 0.96249950 -0.27102829 -0.01176330 131.54884793 |
| 19802 | | -0.22753701 -0.83014177 0.50901037 126.12542957 |
| 19803 | | -0.14772142 -0.48724564 -0.86068000 171.55118760 |
| 19804 | | Axis -0.98989062 0.13508944 0.04321340 |
| 19805 | | Axis point 0.00000000 96.05297655 69.50166830 |
| 19806 | | Rotation angle (degrees) 149.78705549 |
| 19807 | | Shift along axis -105.76744802 |
| 19808 | | |
| 19809 | | |
| 19810 | | > ui mousemode right "rotate selected models" |
| 19811 | | |
| 19812 | | > view matrix models |
| 19813 | | > #19,-0.58434,-0.26752,0.76615,111.03,-0.59932,0.7788,-0.18516,156.94,-0.54714,-0.56737,-0.61541,166.18 |
| 19814 | | |
| 19815 | | > fitmap #19 inMap #15 |
| 19816 | | |
| 19817 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19818 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19819 | | average map value = 0.07178, steps = 152 |
| 19820 | | shifted from previous position = 5.35 |
| 19821 | | rotated from previous position = 15.4 degrees |
| 19822 | | atoms outside contour = 2130, contour level = 0.076685 |
| 19823 | | |
| 19824 | | Position of ranked_4-2.pdb (#19) relative to |
| 19825 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19826 | | Matrix rotation and translation |
| 19827 | | 0.98623582 -0.16208589 -0.03266587 133.38264993 |
| 19828 | | -0.12899612 -0.87785086 0.46123515 130.73665937 |
| 19829 | | -0.10343548 -0.45067286 -0.88667642 174.87184027 |
| 19830 | | Axis -0.99635038 0.07732284 0.03615388 |
| 19831 | | Axis point 0.00000000 92.31378565 72.86844163 |
| 19832 | | Rotation angle (degrees) 152.76609526 |
| 19833 | | Shift along axis -116.46462811 |
| 19834 | | |
| 19835 | | |
| 19836 | | > volume #15 step 2 |
| 19837 | | |
| 19838 | | > view matrix models |
| 19839 | | > #19,-0.38083,0.12138,0.91664,112.05,-0.17466,0.96406,-0.20022,152.86,-0.908,-0.23635,-0.34594,168.05 |
| 19840 | | |
| 19841 | | > ui mousemode right "translate selected models" |
| 19842 | | |
| 19843 | | > view matrix models |
| 19844 | | > #19,-0.38083,0.12138,0.91664,112.09,-0.17466,0.96406,-0.20022,156.81,-0.908,-0.23635,-0.34594,168.95 |
| 19845 | | |
| 19846 | | > fitmap #19 inMap #15 |
| 19847 | | |
| 19848 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19849 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19850 | | average map value = 0.07022, steps = 80 |
| 19851 | | shifted from previous position = 1.66 |
| 19852 | | rotated from previous position = 7.12 degrees |
| 19853 | | atoms outside contour = 2177, contour level = 0.076685 |
| 19854 | | |
| 19855 | | Position of ranked_4-2.pdb (#19) relative to |
| 19856 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19857 | | Matrix rotation and translation |
| 19858 | | 0.82514209 -0.51865125 -0.22392279 129.33235451 |
| 19859 | | -0.21425308 -0.65407193 0.72545539 127.90039635 |
| 19860 | | -0.52271996 -0.55062763 -0.65082491 172.38179215 |
| 19861 | | Axis -0.94841967 0.22207420 0.22623701 |
| 19862 | | Axis point 0.00000000 116.77937958 73.04313814 |
| 19863 | | Rotation angle (degrees) 137.72097116 |
| 19864 | | Shift along axis -55.25882895 |
| 19865 | | |
| 19866 | | |
| 19867 | | > view matrix models |
| 19868 | | > #19,-0.36483,0.24195,0.89909,116.23,-0.11457,0.94664,-0.30123,154.74,-0.924,-0.2129,-0.31764,167.27 |
| 19869 | | |
| 19870 | | > ui mousemode right "rotate selected models" |
| 19871 | | |
| 19872 | | > view matrix models |
| 19873 | | > #19,-0.35962,0.42843,0.82893,117.23,0.24671,0.9004,-0.35834,155.11,-0.89989,0.075641,-0.4295,168.84 |
| 19874 | | |
| 19875 | | > fitmap #19 inMap #15 |
| 19876 | | |
| 19877 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19878 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19879 | | average map value = 0.07576, steps = 92 |
| 19880 | | shifted from previous position = 2.54 |
| 19881 | | rotated from previous position = 10.1 degrees |
| 19882 | | atoms outside contour = 2174, contour level = 0.076685 |
| 19883 | | |
| 19884 | | Position of ranked_4-2.pdb (#19) relative to |
| 19885 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19886 | | Matrix rotation and translation |
| 19887 | | 0.73140042 -0.66558909 -0.14847418 128.28045902 |
| 19888 | | -0.37359204 -0.57321424 0.72928349 131.09696195 |
| 19889 | | -0.57051065 -0.47792948 -0.66790793 168.17599874 |
| 19890 | | Axis -0.92029325 0.32173057 0.22259777 |
| 19891 | | Axis point 0.00000000 123.85941935 70.46975593 |
| 19892 | | Rotation angle (degrees) 139.01321496 |
| 19893 | | Shift along axis -38.44213924 |
| 19894 | | |
| 19895 | | |
| 19896 | | > ui mousemode right "translate selected models" |
| 19897 | | |
| 19898 | | > view matrix models |
| 19899 | | > #19,-0.37192,0.34211,0.86292,95.248,0.076244,0.93773,-0.3389,97.495,-0.92513,-0.060253,-0.37485,165.53 |
| 19900 | | |
| 19901 | | > ui mousemode right "rotate selected models" |
| 19902 | | |
| 19903 | | > view matrix models |
| 19904 | | > #19,-0.40662,0.36469,0.83765,95.417,0.14469,0.93101,-0.3351,97.505,-0.90207,-0.015054,-0.43134,165.97 |
| 19905 | | |
| 19906 | | > view matrix models |
| 19907 | | > #19,-0.43921,0.34409,0.82988,95.353,0.11408,0.93763,-0.32839,97.476,-0.89111,-0.049561,-0.45106,165.94 |
| 19908 | | |
| 19909 | | > view matrix models |
| 19910 | | > #19,-0.39201,0.31749,0.86344,95.141,-0.0097978,0.93707,-0.34901,97.472,-0.91991,-0.14527,-0.36423,165.18 |
| 19911 | | |
| 19912 | | > view matrix models |
| 19913 | | > #19,-0.56305,0.12591,0.81677,94.526,-0.22104,0.92938,-0.29564,97.043,-0.79631,-0.347,-0.49546,165.13 |
| 19914 | | |
| 19915 | | > view matrix models |
| 19916 | | > #19,-0.5605,0.06552,0.82556,94.27,-0.27501,0.92557,-0.26018,96.828,-0.78115,-0.37287,-0.50077,165.08 |
| 19917 | | |
| 19918 | | > view matrix models |
| 19919 | | > #19,-0.59527,0.035189,0.80276,94.236,-0.27595,0.92933,-0.24536,96.774,-0.75466,-0.36758,-0.54348,165.31 |
| 19920 | | |
| 19921 | | Select a database from the database table |
| 19922 | | |
| 19923 | | > open 20026 fromDatabase emdb_fits format ccp4 |
| 19924 | | |
| 19925 | | Fetching url |
| 19926 | | https://files.wwpdb.org/pub/emdb/structures/EMD-20026/map/emd_20026.map.gz |
| 19927 | | failed: |
| 19928 | | <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: |
| 19929 | | unable to get local issuer certificate (_ssl.c:1002)> |
| 19930 | | |
| 19931 | | > select subtract #19 |
| 19932 | | |
| 19933 | | Nothing selected |
| 19934 | | |
| 19935 | | > volume #15 step 1 |
| 19936 | | |
| 19937 | | > volume #15 level 0.0541 |
| 19938 | | |
| 19939 | | > select add #19 |
| 19940 | | |
| 19941 | | 3495 atoms, 3537 bonds, 233 residues, 1 model selected |
| 19942 | | |
| 19943 | | > view matrix models |
| 19944 | | > #19,-0.80044,0.13284,0.58451,95.418,-0.0048128,0.97368,-0.22788,97.062,-0.5994,-0.18521,-0.77873,167.15 |
| 19945 | | |
| 19946 | | > view matrix models |
| 19947 | | > #19,-0.69165,-0.41257,0.5928,93.485,0.054478,0.78864,0.61244,92.646,-0.72018,0.45589,-0.52298,168.23 |
| 19948 | | |
| 19949 | | > ui mousemode right "translate selected models" |
| 19950 | | |
| 19951 | | > view matrix models |
| 19952 | | > #19,-0.69165,-0.41257,0.5928,103.39,0.054478,0.78864,0.61244,149.21,-0.72018,0.45589,-0.52298,173.45 |
| 19953 | | |
| 19954 | | > fitmap #19 inMap #15 |
| 19955 | | |
| 19956 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19957 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19958 | | average map value = 0.06993, steps = 100 |
| 19959 | | shifted from previous position = 3.79 |
| 19960 | | rotated from previous position = 9.19 degrees |
| 19961 | | atoms outside contour = 1891, contour level = 0.054102 |
| 19962 | | |
| 19963 | | Position of ranked_4-2.pdb (#19) relative to |
| 19964 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19965 | | Matrix rotation and translation |
| 19966 | | 0.84792891 -0.29252870 -0.44208995 135.88261780 |
| 19967 | | -0.45643657 -0.82700465 -0.32822091 130.65432750 |
| 19968 | | -0.26959640 0.48009402 -0.83476195 181.08019363 |
| 19969 | | Axis 0.95929817 -0.20471321 -0.19452383 |
| 19970 | | Axis point 0.00000000 57.44180288 120.97447748 |
| 19971 | | Rotation angle (degrees) 155.08297190 |
| 19972 | | Shift along axis 68.38086739 |
| 19973 | | |
| 19974 | | |
| 19975 | | > ui mousemode right "rotate selected models" |
| 19976 | | |
| 19977 | | > view matrix models |
| 19978 | | > #19,-0.6842,-0.42549,0.5923,106.79,-0.034153,0.82997,0.55677,150.49,-0.72849,0.36071,-0.5824,172.9 |
| 19979 | | |
| 19980 | | > fitmap #19 inMap #15 |
| 19981 | | |
| 19982 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 19983 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 19984 | | average map value = 0.06585, steps = 56 |
| 19985 | | shifted from previous position = 0.954 |
| 19986 | | rotated from previous position = 3.02 degrees |
| 19987 | | atoms outside contour = 1911, contour level = 0.054102 |
| 19988 | | |
| 19989 | | Position of ranked_4-2.pdb (#19) relative to |
| 19990 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 19991 | | Matrix rotation and translation |
| 19992 | | 0.86360192 -0.41166159 -0.29107808 134.44595917 |
| 19993 | | -0.47208212 -0.86294131 -0.18019645 129.27471882 |
| 19994 | | -0.17700335 0.29303076 -0.93957585 181.26913103 |
| 19995 | | Axis 0.96475040 -0.23255985 -0.12317705 |
| 19996 | | Axis point 0.00000000 68.52806319 108.72136377 |
| 19997 | | Rotation angle (degrees) 165.80286655 |
| 19998 | | Shift along axis 77.31448651 |
| 19999 | | |
| 20000 | | |
| 20001 | | > view matrix models |
| 20002 | | > #19,-0.69347,-0.49173,0.5266,106.56,0.0057994,0.72706,0.68655,150.11,-0.72047,0.47915,-0.50134,173.36 |
| 20003 | | |
| 20004 | | > view matrix models |
| 20005 | | > #19,-0.71407,-0.45703,0.53032,106.65,0.045454,0.72565,0.68657,150.14,-0.6986,0.51436,-0.49739,173.49 |
| 20006 | | |
| 20007 | | > fitmap #19 inMap #15 |
| 20008 | | |
| 20009 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20010 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20011 | | average map value = 0.06993, steps = 100 |
| 20012 | | shifted from previous position = 1.26 |
| 20013 | | rotated from previous position = 6.09 degrees |
| 20014 | | atoms outside contour = 1890, contour level = 0.054102 |
| 20015 | | |
| 20016 | | Position of ranked_4-2.pdb (#19) relative to |
| 20017 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20018 | | Matrix rotation and translation |
| 20019 | | 0.84791697 -0.29256524 -0.44208867 135.88400315 |
| 20020 | | -0.45662732 -0.82670757 -0.32870363 130.65989576 |
| 20021 | | -0.26931080 0.48058315 -0.83457266 181.07708847 |
| 20022 | | Axis 0.95928974 -0.20480261 -0.19447132 |
| 20023 | | Axis point 0.00000000 57.42192806 120.99315021 |
| 20024 | | Rotation angle (degrees) 155.05073207 |
| 20025 | | Shift along axis 68.37834211 |
| 20026 | | |
| 20027 | | |
| 20028 | | > view matrix models |
| 20029 | | > #19,-0.67603,-0.52825,0.51374,106.79,0.01172,0.6894,0.72428,149.26,-0.73678,0.49566,-0.45987,172.82 |
| 20030 | | |
| 20031 | | > view matrix models |
| 20032 | | > #19,-0.30421,-0.69079,0.65594,105.84,-0.024805,0.69409,0.71946,149.27,-0.95228,0.2026,-0.22828,170.55 |
| 20033 | | |
| 20034 | | > fitmap #19 inMap #15 |
| 20035 | | |
| 20036 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20037 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20038 | | average map value = 0.06838, steps = 88 |
| 20039 | | shifted from previous position = 2.48 |
| 20040 | | rotated from previous position = 9.37 degrees |
| 20041 | | atoms outside contour = 1842, contour level = 0.054102 |
| 20042 | | |
| 20043 | | Position of ranked_4-2.pdb (#19) relative to |
| 20044 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20045 | | Matrix rotation and translation |
| 20046 | | 0.83740053 -0.12142254 -0.53293237 135.17682573 |
| 20047 | | -0.27399572 -0.93691439 -0.21706626 130.13520216 |
| 20048 | | -0.47295527 0.32779259 -0.81784187 180.27603311 |
| 20049 | | Axis 0.95759339 -0.10541018 -0.26814847 |
| 20050 | | Axis point 0.00000000 57.46507600 119.47251638 |
| 20051 | | Rotation angle (degrees) 163.47140437 |
| 20052 | | Shift along axis 67.38611615 |
| 20053 | | |
| 20054 | | |
| 20055 | | > view matrix models |
| 20056 | | > #19,-0.20717,-0.6587,0.72332,106.96,-0.00868,0.74057,0.67192,150.37,-0.97827,0.13292,-0.15914,170.99 |
| 20057 | | |
| 20058 | | > fitmap #19 inMap #15 |
| 20059 | | |
| 20060 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20061 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20062 | | average map value = 0.06861, steps = 108 |
| 20063 | | shifted from previous position = 2.06 |
| 20064 | | rotated from previous position = 12.9 degrees |
| 20065 | | atoms outside contour = 1841, contour level = 0.054102 |
| 20066 | | |
| 20067 | | Position of ranked_4-2.pdb (#19) relative to |
| 20068 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20069 | | Matrix rotation and translation |
| 20070 | | 0.83518566 -0.06295313 -0.54635319 134.53569099 |
| 20071 | | -0.14484949 -0.98353107 -0.10809831 129.95536334 |
| 20072 | | -0.53055021 0.16942115 -0.83054978 180.02974236 |
| 20073 | | Axis 0.95768248 -0.05453396 -0.28261337 |
| 20074 | | Axis point 0.00000000 61.20106052 114.95409526 |
| 20075 | | Rotation angle (degrees) 171.66902314 |
| 20076 | | Shift along axis 70.87668073 |
| 20077 | | |
| 20078 | | |
| 20079 | | > view matrix models |
| 20080 | | > #19,-0.29572,-0.70539,0.64419,107.7,-0.20624,0.70559,0.67794,150.14,-0.93274,0.067626,-0.35414,172.49 |
| 20081 | | |
| 20082 | | > fitmap #19 inMap #15 |
| 20083 | | |
| 20084 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20085 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20086 | | average map value = 0.06861, steps = 120 |
| 20087 | | shifted from previous position = 0.793 |
| 20088 | | rotated from previous position = 7.12 degrees |
| 20089 | | atoms outside contour = 1839, contour level = 0.054102 |
| 20090 | | |
| 20091 | | Position of ranked_4-2.pdb (#19) relative to |
| 20092 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20093 | | Matrix rotation and translation |
| 20094 | | 0.83524237 -0.06314654 -0.54624417 134.53358676 |
| 20095 | | -0.14465565 -0.98362746 -0.10747915 129.94376456 |
| 20096 | | -0.53051382 0.16878845 -0.83070184 180.01808584 |
| 20097 | | Axis 0.95769944 -0.05453025 -0.28255659 |
| 20098 | | Axis point 0.00000000 61.23025486 114.91982175 |
| 20099 | | Rotation angle (degrees) 171.70701635 |
| 20100 | | Shift along axis 70.89157868 |
| 20101 | | |
| 20102 | | |
| 20103 | | > ui mousemode right "translate selected models" |
| 20104 | | |
| 20105 | | > view matrix models |
| 20106 | | > #19,-0.32724,-0.61221,0.7198,113.3,-0.17432,0.78778,0.59078,153.99,-0.92872,0.067846,-0.36451,172.44 |
| 20107 | | |
| 20108 | | > fitmap #19 inMap #15 |
| 20109 | | |
| 20110 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20111 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20112 | | average map value = 0.07415, steps = 132 |
| 20113 | | shifted from previous position = 6.56 |
| 20114 | | rotated from previous position = 17.8 degrees |
| 20115 | | atoms outside contour = 1781, contour level = 0.054102 |
| 20116 | | |
| 20117 | | Position of ranked_4-2.pdb (#19) relative to |
| 20118 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20119 | | Matrix rotation and translation |
| 20120 | | 0.82552356 -0.35381504 -0.43968826 135.30649531 |
| 20121 | | -0.38349555 -0.92325825 0.02292088 131.20204246 |
| 20122 | | -0.41405557 0.14969677 -0.89785793 177.68612582 |
| 20123 | | Axis 0.95533531 -0.19315834 -0.22366115 |
| 20124 | | Axis point 0.00000000 75.94161200 107.17801663 |
| 20125 | | Rotation angle (degrees) 176.19554324 |
| 20126 | | Shift along axis 64.17882108 |
| 20127 | | |
| 20128 | | |
| 20129 | | > view matrix models |
| 20130 | | > #19,-0.51924,-0.3851,0.76294,110.94,-0.005973,0.89434,0.44736,154.65,-0.85461,0.22773,-0.46668,170.56 |
| 20131 | | |
| 20132 | | > fitmap #19 inMap #15 |
| 20133 | | |
| 20134 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20135 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20136 | | average map value = 0.0736, steps = 180 |
| 20137 | | shifted from previous position = 2.62 |
| 20138 | | rotated from previous position = 24.4 degrees |
| 20139 | | atoms outside contour = 1882, contour level = 0.054102 |
| 20140 | | |
| 20141 | | Position of ranked_4-2.pdb (#19) relative to |
| 20142 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20143 | | Matrix rotation and translation |
| 20144 | | 0.66271655 -0.67585835 -0.32252483 131.54171877 |
| 20145 | | -0.71721895 -0.69671225 -0.01374801 126.86160250 |
| 20146 | | -0.21541529 0.24043196 -0.94646116 174.99342446 |
| 20147 | | Axis 0.91133434 -0.38402948 -0.14829390 |
| 20148 | | Axis point 0.00000000 84.16105344 103.74351103 |
| 20149 | | Rotation angle (degrees) 171.98369842 |
| 20150 | | Shift along axis 45.20943359 |
| 20151 | | |
| 20152 | | |
| 20153 | | > view matrix models |
| 20154 | | > #19,-0.71278,-0.10116,0.69405,108.61,0.29704,0.85288,0.42937,148.55,-0.63538,0.51221,-0.57787,169.44 |
| 20155 | | |
| 20156 | | > fitmap #19 inMap #15 |
| 20157 | | |
| 20158 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20159 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20160 | | average map value = 0.07188, steps = 228 |
| 20161 | | shifted from previous position = 1.6 |
| 20162 | | rotated from previous position = 7.5 degrees |
| 20163 | | atoms outside contour = 1869, contour level = 0.054102 |
| 20164 | | |
| 20165 | | Position of ranked_4-2.pdb (#19) relative to |
| 20166 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20167 | | Matrix rotation and translation |
| 20168 | | 0.65765130 -0.62382098 -0.42230575 138.46849603 |
| 20169 | | -0.67583720 -0.73621701 0.03505141 132.39505030 |
| 20170 | | -0.33277448 0.26235833 -0.90577550 178.02630959 |
| 20171 | | Axis 0.91002908 -0.35844073 -0.20824823 |
| 20172 | | Axis point 0.00000000 87.03788829 109.92887274 |
| 20173 | | Rotation angle (degrees) 172.82560088 |
| 20174 | | Shift along axis 41.48091543 |
| 20175 | | |
| 20176 | | |
| 20177 | | > ui mousemode right "rotate selected models" |
| 20178 | | |
| 20179 | | > view matrix models |
| 20180 | | > #19,-0.62728,-0.16075,0.76202,107.69,0.37228,0.79754,0.4747,147.03,-0.68405,0.58145,-0.44044,169.05 |
| 20181 | | |
| 20182 | | > view matrix models |
| 20183 | | > #19,-0.54348,-0.21834,0.81053,107.32,0.52732,0.66247,0.53204,146.39,-0.65312,0.71656,-0.2449,168.68 |
| 20184 | | |
| 20185 | | > view matrix models |
| 20186 | | > #19,-0.73221,-0.66581,0.14341,108.57,-0.015906,0.22722,0.97371,142.41,-0.6809,0.71068,-0.17696,168.34 |
| 20187 | | |
| 20188 | | > view matrix models |
| 20189 | | > #19,-0.74292,-0.65345,0.14518,108.59,0.029053,0.18521,0.98227,142.25,-0.66875,0.73397,-0.11861,168.17 |
| 20190 | | |
| 20191 | | > ui mousemode right "translate selected models" |
| 20192 | | |
| 20193 | | > view matrix models |
| 20194 | | > #19,-0.74292,-0.65345,0.14518,107.44,0.029053,0.18521,0.98227,148.09,-0.66875,0.73397,-0.11861,168.64 |
| 20195 | | |
| 20196 | | > fitmap #19 inMap #15 |
| 20197 | | |
| 20198 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20199 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20200 | | average map value = 0.07275, steps = 120 |
| 20201 | | shifted from previous position = 0.569 |
| 20202 | | rotated from previous position = 14.8 degrees |
| 20203 | | atoms outside contour = 1828, contour level = 0.054102 |
| 20204 | | |
| 20205 | | Position of ranked_4-2.pdb (#19) relative to |
| 20206 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20207 | | Matrix rotation and translation |
| 20208 | | 0.67955460 -0.20019334 -0.70578196 138.75162337 |
| 20209 | | -0.70447909 -0.44654753 -0.55163802 132.32728884 |
| 20210 | | -0.20473093 0.87207679 -0.44448546 177.61826996 |
| 20211 | | Axis 0.89467170 -0.31486374 -0.31689646 |
| 20212 | | Axis point 0.00000000 39.09452163 152.31014007 |
| 20213 | | Rotation angle (degrees) 127.28205253 |
| 20214 | | Shift along axis 26.18548400 |
| 20215 | | |
| 20216 | | |
| 20217 | | > view matrix models |
| 20218 | | > #19,-0.7217,-0.58997,0.36204,105.24,0.27512,0.23545,0.93213,148.69,-0.63518,0.77233,-0.0076135,168.62 |
| 20219 | | |
| 20220 | | > fitmap #19 inMap #15 |
| 20221 | | |
| 20222 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20223 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20224 | | average map value = 0.07275, steps = 96 |
| 20225 | | shifted from previous position = 2.76 |
| 20226 | | rotated from previous position = 0.0166 degrees |
| 20227 | | atoms outside contour = 1829, contour level = 0.054102 |
| 20228 | | |
| 20229 | | Position of ranked_4-2.pdb (#19) relative to |
| 20230 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20231 | | Matrix rotation and translation |
| 20232 | | 0.67941213 -0.20007151 -0.70595364 138.75472247 |
| 20233 | | -0.70460324 -0.44639772 -0.55160070 132.33207265 |
| 20234 | | -0.20477651 0.87218144 -0.44425907 177.62283605 |
| 20235 | | Axis 0.89461400 -0.31490778 -0.31701560 |
| 20236 | | Axis point 0.00000000 39.09058351 152.33206952 |
| 20237 | | Rotation angle (degrees) 127.27363759 |
| 20238 | | Shift along axis 26.15030770 |
| 20239 | | |
| 20240 | | |
| 20241 | | > volume #15 step 2 |
| 20242 | | |
| 20243 | | > view matrix models |
| 20244 | | > #19,-0.72166,-0.59002,0.36205,105.25,0.27531,0.23524,0.93213,147.11,-0.63514,0.77236,-0.0073271,168.51 |
| 20245 | | |
| 20246 | | > view matrix models |
| 20247 | | > #19,-0.72166,-0.59002,0.36205,107.84,0.27531,0.23524,0.93213,148.65,-0.63514,0.77236,-0.0073271,168.48 |
| 20248 | | |
| 20249 | | > fitmap #19 inMap #15 |
| 20250 | | |
| 20251 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20252 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20253 | | average map value = 0.07275, steps = 68 |
| 20254 | | shifted from previous position = 1.28 |
| 20255 | | rotated from previous position = 0.0381 degrees |
| 20256 | | atoms outside contour = 1839, contour level = 0.054102 |
| 20257 | | |
| 20258 | | Position of ranked_4-2.pdb (#19) relative to |
| 20259 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20260 | | Matrix rotation and translation |
| 20261 | | 0.67957323 -0.20058085 -0.70565398 138.74600561 |
| 20262 | | -0.70451519 -0.44663453 -0.55152148 132.32196880 |
| 20263 | | -0.20454479 0.87194319 -0.44483312 177.62536481 |
| 20264 | | Axis 0.89469263 -0.31496300 -0.31673870 |
| 20265 | | Axis point 0.00000000 39.11422991 152.28649312 |
| 20266 | | Rotation angle (degrees) 127.29703322 |
| 20267 | | Shift along axis 26.19767815 |
| 20268 | | |
| 20269 | | |
| 20270 | | > volume #15 step 1 |
| 20271 | | |
| 20272 | | > fitmap #19 inMap #15 |
| 20273 | | |
| 20274 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20275 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20276 | | average map value = 0.07275, steps = 80 |
| 20277 | | shifted from previous position = 0.00278 |
| 20278 | | rotated from previous position = 0.0125 degrees |
| 20279 | | atoms outside contour = 1831, contour level = 0.054102 |
| 20280 | | |
| 20281 | | Position of ranked_4-2.pdb (#19) relative to |
| 20282 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20283 | | Matrix rotation and translation |
| 20284 | | 0.67946561 -0.20045401 -0.70579365 138.74784763 |
| 20285 | | -0.70457685 -0.44663105 -0.55144552 132.32231558 |
| 20286 | | -0.20468990 0.87197413 -0.44470569 177.62806543 |
| 20287 | | Axis 0.89465437 -0.31495607 -0.31685364 |
| 20288 | | Axis point 0.00000000 39.11262195 152.29845510 |
| 20289 | | Rotation angle (degrees) 127.29619502 |
| 20290 | | Shift along axis 26.17355212 |
| 20291 | | |
| 20292 | | |
| 20293 | | > view matrix models |
| 20294 | | > #19,-0.72173,-0.5898,0.36227,112.19,0.27524,0.23568,0.93204,151.26,-0.6351,0.77239,-0.0077639,168.43 |
| 20295 | | |
| 20296 | | > fitmap #19 inMap #15 |
| 20297 | | |
| 20298 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20299 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20300 | | average map value = 0.07895, steps = 144 |
| 20301 | | shifted from previous position = 4.82 |
| 20302 | | rotated from previous position = 22.2 degrees |
| 20303 | | atoms outside contour = 1811, contour level = 0.054102 |
| 20304 | | |
| 20305 | | Position of ranked_4-2.pdb (#19) relative to |
| 20306 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20307 | | Matrix rotation and translation |
| 20308 | | 0.37080404 -0.28095887 -0.88519290 138.15512157 |
| 20309 | | -0.85887394 -0.46636351 -0.21175606 131.02785052 |
| 20310 | | -0.35332692 0.83878912 -0.41423773 172.41549640 |
| 20311 | | Axis 0.80091390 -0.40548361 -0.44059048 |
| 20312 | | Axis point 0.00000000 62.15611706 153.03308169 |
| 20313 | | Rotation angle (degrees) 139.01651002 |
| 20314 | | Shift along axis -18.44391616 |
| 20315 | | |
| 20316 | | |
| 20317 | | > view matrix models |
| 20318 | | > #19,-0.53779,-0.53304,0.65319,111.9,0.60004,0.30224,0.74067,150.49,-0.59223,0.79027,0.15731,163.67 |
| 20319 | | |
| 20320 | | > fitmap #19 inMap #15 |
| 20321 | | |
| 20322 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20323 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20324 | | average map value = 0.07895, steps = 60 |
| 20325 | | shifted from previous position = 2.05 |
| 20326 | | rotated from previous position = 0.0602 degrees |
| 20327 | | atoms outside contour = 1813, contour level = 0.054102 |
| 20328 | | |
| 20329 | | Position of ranked_4-2.pdb (#19) relative to |
| 20330 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20331 | | Matrix rotation and translation |
| 20332 | | 0.37002606 -0.28044880 -0.88568007 138.16842362 |
| 20333 | | -0.85908555 -0.46618054 -0.21130008 131.03629835 |
| 20334 | | -0.35362796 0.83906148 -0.41342846 172.42047397 |
| 20335 | | Axis 0.80062340 -0.40554928 -0.44105776 |
| 20336 | | Axis point 0.00000000 62.17225415 153.10090251 |
| 20337 | | Rotation angle (degrees) 139.00715220 |
| 20338 | | Shift along axis -18.56819118 |
| 20339 | | |
| 20340 | | |
| 20341 | | > ui mousemode right translate |
| 20342 | | |
| 20343 | | > ui mousemode right "translate selected models" |
| 20344 | | |
| 20345 | | > view matrix models |
| 20346 | | > #19,-0.53726,-0.5334,0.65333,106.94,0.6007,0.30175,0.74034,151.32,-0.59204,0.79021,0.15829,165.72 |
| 20347 | | |
| 20348 | | > fitmap #19 inMap #15 |
| 20349 | | |
| 20350 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20351 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20352 | | average map value = 0.0731, steps = 72 |
| 20353 | | shifted from previous position = 1.94 |
| 20354 | | rotated from previous position = 1.8 degrees |
| 20355 | | atoms outside contour = 1873, contour level = 0.054102 |
| 20356 | | |
| 20357 | | Position of ranked_4-2.pdb (#19) relative to |
| 20358 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20359 | | Matrix rotation and translation |
| 20360 | | 0.38334962 -0.28121981 -0.87974911 138.19019407 |
| 20361 | | -0.86387422 -0.44615198 -0.23381562 128.30785343 |
| 20362 | | -0.32674822 0.84962570 -0.41397073 176.64115742 |
| 20363 | | Axis 0.80328967 -0.41000827 -0.43199412 |
| 20364 | | Axis point 0.00000000 58.63621233 154.68752894 |
| 20365 | | Rotation angle (degrees) 137.59415487 |
| 20366 | | Shift along axis -17.90846573 |
| 20367 | | |
| 20368 | | |
| 20369 | | > view matrix models |
| 20370 | | > #19,-0.56255,-0.52703,0.63701,106.96,0.59056,0.28307,0.75572,146.06,-0.5786,0.80132,0.152,166.92 |
| 20371 | | |
| 20372 | | > fitmap #19 inMap #15 |
| 20373 | | |
| 20374 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20375 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20376 | | average map value = 0.0746, steps = 108 |
| 20377 | | shifted from previous position = 2.56 |
| 20378 | | rotated from previous position = 14.5 degrees |
| 20379 | | atoms outside contour = 1825, contour level = 0.054102 |
| 20380 | | |
| 20381 | | Position of ranked_4-2.pdb (#19) relative to |
| 20382 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20383 | | Matrix rotation and translation |
| 20384 | | 0.19396980 -0.43423574 -0.87966757 138.45298452 |
| 20385 | | -0.90999705 -0.41459541 0.00400174 132.07974753 |
| 20386 | | -0.36644384 0.79971868 -0.47557223 177.23346793 |
| 20387 | | Axis 0.75090600 -0.48432145 -0.44896873 |
| 20388 | | Axis point 0.00000000 80.24815764 151.56219019 |
| 20389 | | Rotation angle (degrees) 148.00549592 |
| 20390 | | Shift along axis -39.57616212 |
| 20391 | | |
| 20392 | | |
| 20393 | | > view matrix models |
| 20394 | | > #19,-0.44909,-0.38657,0.80553,109.35,0.73671,0.34992,0.57864,151.81,-0.50555,0.8533,0.12764,167.87 |
| 20395 | | |
| 20396 | | > fitmap #19 inMap #15 |
| 20397 | | |
| 20398 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20399 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20400 | | average map value = 0.07553, steps = 60 |
| 20401 | | shifted from previous position = 2.66 |
| 20402 | | rotated from previous position = 5.32 degrees |
| 20403 | | atoms outside contour = 1831, contour level = 0.054102 |
| 20404 | | |
| 20405 | | Position of ranked_4-2.pdb (#19) relative to |
| 20406 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20407 | | Matrix rotation and translation |
| 20408 | | 0.14650584 -0.48024616 -0.86481192 136.79134509 |
| 20409 | | -0.89576616 -0.43532103 0.08999214 129.42918323 |
| 20410 | | -0.41968919 0.76148488 -0.49396533 172.69636382 |
| 20411 | | Axis 0.74077508 -0.49104898 -0.45839194 |
| 20412 | | Axis point 0.00000000 85.18905065 146.31868221 |
| 20413 | | Rotation angle (degrees) 153.04846935 |
| 20414 | | Shift along axis -41.38707023 |
| 20415 | | |
| 20416 | | |
| 20417 | | > save "/Users/mansoore.esmaili/Documents/Apoferritin human/fab-mst1r.cxs" |
| 20418 | | |
| 20419 | | > view matrix models |
| 20420 | | > #19,-0.38305,-0.34936,0.85511,104.09,0.76385,0.40075,0.5059,147.56,-0.51943,0.84696,0.11335,167.32 |
| 20421 | | |
| 20422 | | > hide #!12 models |
| 20423 | | |
| 20424 | | > fitmap #19 inMap #15 |
| 20425 | | |
| 20426 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20427 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20428 | | average map value = 0.07637, steps = 136 |
| 20429 | | shifted from previous position = 5.36 |
| 20430 | | rotated from previous position = 4.99 degrees |
| 20431 | | atoms outside contour = 1816, contour level = 0.054102 |
| 20432 | | |
| 20433 | | Position of ranked_4-2.pdb (#19) relative to |
| 20434 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20435 | | Matrix rotation and translation |
| 20436 | | 0.08430726 -0.53575879 -0.84015166 136.51965110 |
| 20437 | | -0.90350593 -0.39666224 0.16228400 131.07354630 |
| 20438 | | -0.42020151 0.74540029 -0.51750275 176.86665123 |
| 20439 | | Axis 0.72236674 -0.52023588 -0.45556660 |
| 20440 | | Axis point 0.00000000 92.22601298 146.79835150 |
| 20441 | | Rotation angle (degrees) 156.19562685 |
| 20442 | | Shift along axis -50.14644526 |
| 20443 | | |
| 20444 | | |
| 20445 | | > view matrix models |
| 20446 | | > #19,-0.34816,-0.2839,0.89341,62.6,0.8025,0.40234,0.44058,111.15,-0.48454,0.87036,0.087755,162.17 |
| 20447 | | |
| 20448 | | > ui mousemode right "rotate selected models" |
| 20449 | | |
| 20450 | | > view matrix models |
| 20451 | | > #19,-0.2137,-0.30536,0.92795,62.469,0.78471,0.51212,0.34924,111.94,-0.58186,0.8028,0.13018,161.66 |
| 20452 | | |
| 20453 | | > view matrix models |
| 20454 | | > #19,0.11054,-0.80251,0.58631,62.454,0.14546,0.59664,0.78922,109.78,-0.98317,-0.001952,0.18269,158.2 |
| 20455 | | |
| 20456 | | > view matrix models |
| 20457 | | > #19,0.77934,-0.62452,0.050999,66.024,-0.27919,-0.27323,0.92054,105.71,-0.56096,-0.73165,-0.38731,158.45 |
| 20458 | | |
| 20459 | | > view matrix models |
| 20460 | | > #19,0.98449,-0.17539,-0.0049133,68.061,-0.12964,-0.74598,0.65323,105.31,-0.11824,-0.64246,-0.75714,160.78 |
| 20461 | | |
| 20462 | | > ui mousemode right "translate selected models" |
| 20463 | | |
| 20464 | | > view matrix models |
| 20465 | | > #19,0.98449,-0.17539,-0.0049133,110.72,-0.12964,-0.74598,0.65323,142.22,-0.11824,-0.64246,-0.75714,168.21 |
| 20466 | | |
| 20467 | | > fitmap #19 inMap #15 |
| 20468 | | |
| 20469 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20470 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20471 | | average map value = 0.07439, steps = 120 |
| 20472 | | shifted from previous position = 7.5 |
| 20473 | | rotated from previous position = 10.8 degrees |
| 20474 | | atoms outside contour = 1813, contour level = 0.054102 |
| 20475 | | |
| 20476 | | Position of ranked_4-2.pdb (#19) relative to |
| 20477 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20478 | | Matrix rotation and translation |
| 20479 | | -0.48076591 0.87540921 0.05022788 142.04324343 |
| 20480 | | 0.76337665 0.44604644 -0.46722442 131.51150793 |
| 20481 | | -0.43141653 -0.18628279 -0.88271088 179.00598987 |
| 20482 | | Axis 0.49397532 0.84686790 -0.19698512 |
| 20483 | | Axis point 50.48011965 0.00000000 98.81627000 |
| 20484 | | Rotation angle (degrees) 163.47892015 |
| 20485 | | Shift along axis 146.27721503 |
| 20486 | | |
| 20487 | | |
| 20488 | | > view matrix models |
| 20489 | | > #19,0.96627,-0.19612,0.16692,105.64,-0.25722,-0.7668,0.5881,146.8,0.012653,-0.6112,-0.79138,164.23 |
| 20490 | | |
| 20491 | | > fitmap #19 inMap #15 |
| 20492 | | |
| 20493 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20494 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20495 | | average map value = 0.07726, steps = 112 |
| 20496 | | shifted from previous position = 1.33 |
| 20497 | | rotated from previous position = 14.6 degrees |
| 20498 | | atoms outside contour = 1809, contour level = 0.054102 |
| 20499 | | |
| 20500 | | Position of ranked_4-2.pdb (#19) relative to |
| 20501 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20502 | | Matrix rotation and translation |
| 20503 | | -0.57443623 0.81189806 -0.10413720 141.62421153 |
| 20504 | | 0.79332542 0.52087169 -0.31516257 131.27574306 |
| 20505 | | -0.20163776 -0.26365549 -0.94330695 175.80849586 |
| 20506 | | Axis 0.46061448 0.87192220 -0.16609026 |
| 20507 | | Axis point 39.35889940 0.00000000 99.24743377 |
| 20508 | | Rotation angle (degrees) 176.79484849 |
| 20509 | | Shift along axis 150.49632007 |
| 20510 | | |
| 20511 | | |
| 20512 | | > view matrix models |
| 20513 | | > #19,0.92097,-0.072604,0.38281,58.672,-0.29401,-0.77421,0.5605,113.89,0.25568,-0.62875,-0.73437,140.29 |
| 20514 | | |
| 20515 | | > ui mousemode right "rotate selected models" |
| 20516 | | |
| 20517 | | > view matrix models |
| 20518 | | > #19,0.97688,-0.17764,0.11893,59.524,-0.2108,-0.89304,0.39754,114.26,0.03559,-0.41342,-0.90984,141.7 |
| 20519 | | |
| 20520 | | > view matrix models |
| 20521 | | > #19,0.94321,-0.061102,0.32654,58.984,-0.18199,-0.91736,0.35402,114.39,0.27792,-0.39334,-0.87638,141.8 |
| 20522 | | |
| 20523 | | > view matrix models |
| 20524 | | > #19,0.98931,-0.12809,-0.069694,60.564,-0.10968,-0.96857,0.22324,114.85,-0.096099,-0.21321,-0.97227,142.61 |
| 20525 | | |
| 20526 | | > view matrix models |
| 20527 | | > #19,0.98986,-0.142,0.0022315,60.189,-0.1395,-0.96925,0.20272,114.92,-0.026624,-0.20098,-0.97923,142.73 |
| 20528 | | |
| 20529 | | > ui mousemode right "translate selected models" |
| 20530 | | |
| 20531 | | > view matrix models |
| 20532 | | > #19,0.98986,-0.142,0.0022315,65.916,-0.1395,-0.96925,0.20272,112.66,-0.026624,-0.20098,-0.97923,142.44 |
| 20533 | | |
| 20534 | | > view matrix models |
| 20535 | | > #19,0.98986,-0.142,0.0022315,66.472,-0.1395,-0.96925,0.20272,103.84,-0.026624,-0.20098,-0.97923,139.12 |
| 20536 | | |
| 20537 | | > ui mousemode right "rotate selected models" |
| 20538 | | |
| 20539 | | > view matrix models |
| 20540 | | > #19,0.98374,-0.15892,0.083718,66.039,-0.17136,-0.97004,0.17224,103.95,0.053838,-0.18379,-0.98149,139.25 |
| 20541 | | |
| 20542 | | > view matrix models |
| 20543 | | > #19,0.99106,-0.12759,0.038906,66.36,-0.13317,-0.96333,0.23295,103.73,0.0077572,-0.23604,-0.97171,138.98 |
| 20544 | | |
| 20545 | | > view matrix models |
| 20546 | | > #19,0.96173,-0.087007,-0.25982,67.832,0.024504,-0.91713,0.39783,103.27,-0.2729,-0.38897,-0.8799,137.8 |
| 20547 | | |
| 20548 | | > view matrix models |
| 20549 | | > #19,0.99131,-0.11038,-0.071607,66.921,-0.089298,-0.96413,0.24996,103.68,-0.096629,-0.24139,-0.9656,138.86 |
| 20550 | | |
| 20551 | | > view matrix models |
| 20552 | | > #19,0.98259,-0.17826,0.052271,66.109,-0.1842,-0.97144,0.14958,104.04,0.024113,-0.15661,-0.98737,139.35 |
| 20553 | | |
| 20554 | | > view matrix models |
| 20555 | | > #19,0.51068,-0.16894,0.84301,62.217,-0.20207,-0.97662,-0.073304,105.01,0.83569,-0.13291,-0.53288,138.01 |
| 20556 | | |
| 20557 | | > view matrix models |
| 20558 | | > #19,0.19267,-0.68043,0.70703,60.732,0.94297,-0.070927,-0.32522,110.3,0.27144,0.72937,0.62797,135.47 |
| 20559 | | |
| 20560 | | > view matrix models |
| 20561 | | > #19,0.39471,-0.88765,0.23724,62.254,0.86849,0.44471,0.21898,109.66,-0.29989,0.1196,0.94645,131.39 |
| 20562 | | |
| 20563 | | > view matrix models |
| 20564 | | > #19,0.31068,-0.89801,0.31153,61.817,-0.28056,0.22652,0.93273,104.78,-0.90817,-0.37718,-0.18157,134.21 |
| 20565 | | |
| 20566 | | > view matrix models |
| 20567 | | > #19,0.1484,-0.97088,0.18808,61.986,-0.26572,0.14405,0.95323,104.4,-0.95256,-0.19143,-0.23661,135.1 |
| 20568 | | |
| 20569 | | > ui mousemode right "translate selected models" |
| 20570 | | |
| 20571 | | > view matrix models |
| 20572 | | > #19,0.1484,-0.97088,0.18808,115.35,-0.26572,0.14405,0.95323,151.13,-0.95256,-0.19143,-0.23661,139.67 |
| 20573 | | |
| 20574 | | > fitmap #19 inMap #15 |
| 20575 | | |
| 20576 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20577 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20578 | | average map value = 0.06469, steps = 136 |
| 20579 | | shifted from previous position = 6.75 |
| 20580 | | rotated from previous position = 13 degrees |
| 20581 | | atoms outside contour = 2202, contour level = 0.054102 |
| 20582 | | |
| 20583 | | Position of ranked_4-2.pdb (#19) relative to |
| 20584 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20585 | | Matrix rotation and translation |
| 20586 | | 0.64338743 0.53955350 -0.54307884 142.56923905 |
| 20587 | | 0.25290259 -0.81938056 -0.51444705 128.28762157 |
| 20588 | | -0.72255995 0.19364272 -0.66363364 146.12894147 |
| 20589 | | Axis 0.90235594 0.22872220 -0.36529429 |
| 20590 | | Axis point 0.00000000 25.19953327 113.74031501 |
| 20591 | | Rotation angle (degrees) 156.89881553 |
| 20592 | | Shift along axis 104.61035774 |
| 20593 | | |
| 20594 | | |
| 20595 | | > view matrix models |
| 20596 | | > #19,0.12202,-0.90976,0.3968,51.616,-0.34726,0.33539,0.87574,91.65,-0.9298,-0.24465,-0.275,134.14 |
| 20597 | | |
| 20598 | | > view matrix models |
| 20599 | | > #19,0.12202,-0.90976,0.3968,56.49,-0.34726,0.33539,0.87574,96.654,-0.9298,-0.24465,-0.275,134.61 |
| 20600 | | |
| 20601 | | > ui mousemode right "rotate selected models" |
| 20602 | | |
| 20603 | | > view matrix models |
| 20604 | | > #19,-0.1076,-0.98991,0.092251,57.398,-0.98869,0.11629,0.094741,98.893,-0.10451,-0.081013,-0.99122,139.06 |
| 20605 | | |
| 20606 | | > view matrix models |
| 20607 | | > #19,0.060937,-0.8568,-0.51204,60.736,-0.41082,-0.48906,0.76945,94.094,-0.90968,0.16347,-0.38179,136.59 |
| 20608 | | |
| 20609 | | > view matrix models |
| 20610 | | > #19,0.11142,-0.84126,-0.52902,60.907,0.057899,-0.52593,0.84855,93.961,-0.99209,-0.12518,-0.0098918,133.8 |
| 20611 | | |
| 20612 | | > view matrix models |
| 20613 | | > #19,0.5011,-0.82181,-0.27115,60.111,-0.62601,-0.56057,0.5421,94.696,-0.59751,-0.1019,-0.79536,137.73 |
| 20614 | | |
| 20615 | | > view matrix models |
| 20616 | | > #19,0.57051,-0.81832,-0.069803,59.268,-0.79898,-0.57268,0.18352,96.138,-0.19015,-0.048928,-0.98053,139.06 |
| 20617 | | |
| 20618 | | > view matrix models |
| 20619 | | > #19,0.32119,-0.8971,0.30339,57.109,-0.68907,-0.44115,-0.57495,100.12,0.64963,-0.024386,-0.75986,138.8 |
| 20620 | | |
| 20621 | | > view matrix models |
| 20622 | | > #19,-0.12553,-0.91052,0.39395,56.312,-0.15975,-0.37336,-0.91383,102.3,0.97914,-0.17764,-0.098591,135.51 |
| 20623 | | |
| 20624 | | > view matrix models |
| 20625 | | > #19,-0.4003,-0.88433,0.24026,56.891,0.32415,-0.38188,-0.8655,102.42,0.85714,-0.26858,0.43952,132.66 |
| 20626 | | |
| 20627 | | > view matrix models |
| 20628 | | > #19,-0.56536,-0.81829,-0.10378,58.556,0.74937,-0.45697,-0.47919,100.73,0.34469,-0.34868,0.87156,130.03 |
| 20629 | | |
| 20630 | | > view matrix models |
| 20631 | | > #19,-0.54137,-0.80073,-0.25641,59.327,0.84078,-0.51614,-0.16334,99.157,-0.0015537,-0.30401,0.95267,129.56 |
| 20632 | | |
| 20633 | | > view matrix models |
| 20634 | | > #19,-0.31802,-0.7616,-0.56465,61.03,0.70879,-0.58653,0.39191,96.296,-0.62966,-0.27558,0.72635,130.21 |
| 20635 | | |
| 20636 | | > view matrix models |
| 20637 | | > #19,-0.19546,-0.76367,-0.61531,61.344,0.5138,-0.61416,0.59902,95.113,-0.83535,-0.19906,0.51241,131.29 |
| 20638 | | |
| 20639 | | > ui mousemode right "translate selected models" |
| 20640 | | |
| 20641 | | > view matrix models |
| 20642 | | > #19,-0.19546,-0.76367,-0.61531,115.49,0.5138,-0.61416,0.59902,153.17,-0.83535,-0.19906,0.51241,145.04 |
| 20643 | | |
| 20644 | | > fitmap #19 inMap #15 |
| 20645 | | |
| 20646 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20647 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20648 | | average map value = 0.0867, steps = 176 |
| 20649 | | shifted from previous position = 1.71 |
| 20650 | | rotated from previous position = 17.2 degrees |
| 20651 | | atoms outside contour = 1926, contour level = 0.054102 |
| 20652 | | |
| 20653 | | Position of ranked_4-2.pdb (#19) relative to |
| 20654 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20655 | | Matrix rotation and translation |
| 20656 | | 0.40249942 0.81689631 -0.41312786 144.02165951 |
| 20657 | | -0.77332989 0.06193305 -0.63097161 128.38454338 |
| 20658 | | -0.48985211 0.57344983 0.65665836 152.89312220 |
| 20659 | | Axis 0.60331754 0.03843263 -0.79657446 |
| 20660 | | Axis point 216.30030768 -40.22664428 0.00000000 |
| 20661 | | Rotation angle (degrees) 86.52888043 |
| 20662 | | Shift along axis -29.96580715 |
| 20663 | | |
| 20664 | | |
| 20665 | | > view matrix models |
| 20666 | | > #19,-0.4367,-0.78004,-0.44813,115.49,0.55028,-0.6257,0.55289,140.68,-0.71167,-0.0051566,0.70249,160.44 |
| 20667 | | |
| 20668 | | > fitmap #19 inMap #15 |
| 20669 | | |
| 20670 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20671 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20672 | | average map value = 0.05411, steps = 224 |
| 20673 | | shifted from previous position = 5.15 |
| 20674 | | rotated from previous position = 5.5 degrees |
| 20675 | | atoms outside contour = 2174, contour level = 0.054102 |
| 20676 | | |
| 20677 | | Position of ranked_4-2.pdb (#19) relative to |
| 20678 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20679 | | Matrix rotation and translation |
| 20680 | | 0.43274613 0.83800913 -0.33237252 137.68179786 |
| 20681 | | -0.76088132 0.14177095 -0.63321451 138.80492442 |
| 20682 | | -0.48351877 0.52691716 0.69897632 169.16873081 |
| 20683 | | Axis 0.58556662 0.07628979 -0.80702639 |
| 20684 | | Axis point 231.35649045 -39.35200884 0.00000000 |
| 20685 | | Rotation angle (degrees) 82.14036481 |
| 20686 | | Shift along axis -45.31236719 |
| 20687 | | |
| 20688 | | |
| 20689 | | > view matrix models |
| 20690 | | > #19,-0.45191,-0.72307,-0.52245,70.744,0.52281,-0.68922,0.50165,99.139,-0.7228,-0.046445,0.68949,150.96 |
| 20691 | | |
| 20692 | | > view matrix models |
| 20693 | | > #19,-0.45191,-0.72307,-0.52245,68.861,0.52281,-0.68922,0.50165,96.736,-0.7228,-0.046445,0.68949,157.23 |
| 20694 | | |
| 20695 | | > ui mousemode right "rotate selected models" |
| 20696 | | |
| 20697 | | > view matrix models |
| 20698 | | > #19,-0.060705,-0.61042,-0.78975,70.774,0.3025,-0.76525,0.56823,95.992,-0.95121,-0.20441,0.23111,158.55 |
| 20699 | | |
| 20700 | | > view matrix models |
| 20701 | | > #19,0.33055,-0.41724,-0.84655,72.029,-0.063628,-0.90478,0.42109,95.87,-0.94164,-0.085328,-0.32563,161.51 |
| 20702 | | |
| 20703 | | > view matrix models |
| 20704 | | > #19,0.64863,-0.6522,-0.39232,69.37,-0.45431,-0.74534,0.48793,95.85,-0.61064,-0.13825,-0.77975,163.61 |
| 20705 | | |
| 20706 | | > view matrix models |
| 20707 | | > #19,0.6077,-0.77395,0.17809,66.324,-0.78408,-0.54906,0.28939,97.206,-0.12619,-0.3155,-0.9405,164.07 |
| 20708 | | |
| 20709 | | > view matrix models |
| 20710 | | > #19,-0.016143,-0.71501,0.69893,63.713,-0.94222,-0.22305,-0.24994,100.7,0.33461,-0.66258,-0.6701,161.94 |
| 20711 | | |
| 20712 | | > view matrix models |
| 20713 | | > #19,-0.45581,-0.37421,0.8076,64.124,-0.72541,-0.3696,-0.58068,101.83,0.51578,-0.85051,-0.10299,158.84 |
| 20714 | | |
| 20715 | | > view matrix models |
| 20716 | | > #19,-0.94508,-0.077115,0.31763,67.039,-0.22949,-0.53542,-0.81281,102.65,0.23274,-0.84106,0.48831,155.99 |
| 20717 | | |
| 20718 | | > view matrix models |
| 20719 | | > #19,-0.88776,0.077795,-0.45369,71.124,0.21013,-0.80843,-0.5498,100.81,-0.40955,-0.58343,0.70135,155.47 |
| 20720 | | |
| 20721 | | > view matrix models |
| 20722 | | > #19,-0.49628,0.08066,-0.86441,73.286,0.21083,-0.95467,-0.21013,98.746,-0.84217,-0.28653,0.45678,157.32 |
| 20723 | | |
| 20724 | | > view matrix models |
| 20725 | | > #19,0.21402,-0.27333,-0.93781,72.874,-0.11725,-0.9603,0.25313,96.386,-0.96977,0.05578,-0.23757,161.6 |
| 20726 | | |
| 20727 | | > view matrix models |
| 20728 | | > #19,0.55968,-0.66144,-0.49926,69.751,-0.5438,-0.74774,0.38102,96.255,-0.62534,0.058248,-0.77818,164.31 |
| 20729 | | |
| 20730 | | > view matrix models |
| 20731 | | > #19,0.94078,-0.33424,-0.056723,69.232,-0.33664,-0.9408,-0.039629,97.61,-0.04012,0.056378,-0.9976,165.74 |
| 20732 | | |
| 20733 | | > view matrix models |
| 20734 | | > #19,0.9312,-0.24787,0.26727,68.076,-0.20097,-0.96082,-0.19088,98.323,0.30411,0.12403,-0.94453,166.01 |
| 20735 | | |
| 20736 | | > view matrix models |
| 20737 | | > #19,0.9543,-0.098532,0.28214,68.568,-0.055413,-0.98605,-0.15693,98.189,0.29367,0.13413,-0.94645,166.04 |
| 20738 | | |
| 20739 | | > view matrix models |
| 20740 | | > #19,0.77932,-0.52018,0.34938,66.602,-0.36433,-0.82978,-0.42277,99.72,0.50983,0.20218,-0.83618,165.96 |
| 20741 | | |
| 20742 | | > view matrix models |
| 20743 | | > #19,-0.37675,-0.82601,0.41924,64.297,0.22009,-0.51945,-0.82567,103.11,0.89979,-0.2188,0.3775,159.25 |
| 20744 | | |
| 20745 | | > view matrix models |
| 20746 | | > #19,-0.77207,0.4528,0.44596,68.514,0.24764,0.86058,-0.44505,106.42,-0.5853,-0.23317,-0.77657,163.27 |
| 20747 | | |
| 20748 | | > view matrix models |
| 20749 | | > #19,-0.13067,0.27101,0.95367,66.053,-0.2755,0.9141,-0.29752,105.55,-0.95238,-0.30161,-0.044779,159.45 |
| 20750 | | |
| 20751 | | > view matrix models |
| 20752 | | > #19,0.88001,0.21528,0.42335,69.013,-0.33841,0.90964,0.24088,103.06,-0.33325,-0.35525,0.87335,155.58 |
| 20753 | | |
| 20754 | | > view matrix models |
| 20755 | | > #19,0.87694,-0.34803,0.33143,67.382,0.39701,0.91325,-0.091463,105.13,-0.27085,0.21179,0.93903,157.39 |
| 20756 | | |
| 20757 | | > view matrix models |
| 20758 | | > #19,-0.20537,-0.24702,0.947,64.147,0.30135,0.90465,0.30133,103.25,-0.93113,0.34726,-0.11135,162.12 |
| 20759 | | |
| 20760 | | > view matrix models |
| 20761 | | > #19,-0.98703,-0.015991,0.15976,67.941,0.048703,0.91832,0.39283,102.7,-0.15299,0.39551,-0.90563,166.47 |
| 20762 | | |
| 20763 | | > view matrix models |
| 20764 | | > #19,-0.97915,-0.18624,0.081142,67.684,-0.10587,0.8087,0.57862,101.34,-0.17338,0.55796,-0.81155,166.62 |
| 20765 | | |
| 20766 | | > view matrix models |
| 20767 | | > #19,-0.96056,-0.27751,0.017721,67.653,-0.19404,0.71454,0.67215,100.51,-0.19919,0.6422,-0.7402,166.58 |
| 20768 | | |
| 20769 | | > view matrix models |
| 20770 | | > #19,-0.95614,-0.29287,0.0051377,67.658,-0.20935,0.69551,0.68734,100.36,-0.20487,0.65612,-0.72632,166.56 |
| 20771 | | |
| 20772 | | > view matrix models |
| 20773 | | > #19,-0.97633,-0.20477,0.069679,67.671,-0.12341,0.79193,0.598,101.18,-0.17763,0.57525,-0.79846,166.62 |
| 20774 | | |
| 20775 | | > view matrix models |
| 20776 | | > #19,-0.74364,-0.5328,-0.40389,68.794,-0.50144,0.044888,0.86403,96.984,-0.44223,0.84505,-0.30055,165.15 |
| 20777 | | |
| 20778 | | > view matrix models |
| 20779 | | > #19,-0.77319,-0.5243,-0.35678,68.59,-0.48296,0.1222,0.86707,97.264,-0.411,0.84272,-0.3477,165.38 |
| 20780 | | |
| 20781 | | > view matrix models |
| 20782 | | > #19,-0.62918,-0.52717,-0.57117,69.657,-0.53861,-0.2341,0.80938,96.19,-0.56039,0.81688,-0.13665,164.22 |
| 20783 | | |
| 20784 | | > view matrix models |
| 20785 | | > #19,-0.37161,-0.3205,-0.87131,71.957,-0.44946,-0.75909,0.47091,95.88,-0.81234,0.56662,0.13803,161.88 |
| 20786 | | |
| 20787 | | > view matrix models |
| 20788 | | > #19,0.81343,-0.57402,-0.094024,68.433,-0.55074,-0.70804,-0.44201,100.11,0.18715,0.41133,-0.89207,166.72 |
| 20789 | | |
| 20790 | | > view matrix models |
| 20791 | | > #19,0.41741,-0.63072,0.65419,64.551,-0.26744,-0.77329,-0.5749,100.68,0.86847,0.065013,-0.49145,164.18 |
| 20792 | | |
| 20793 | | > view matrix models |
| 20794 | | > #19,-0.29639,-0.32677,0.89743,64.012,-0.22083,-0.89074,-0.39726,99.493,0.92919,-0.31592,0.19184,159.76 |
| 20795 | | |
| 20796 | | > view matrix models |
| 20797 | | > #19,-0.20716,-0.071817,0.97567,64.652,-0.54359,-0.82073,-0.17583,98.502,0.81339,-0.56678,0.13098,159.04 |
| 20798 | | |
| 20799 | | > view matrix models |
| 20800 | | > #19,-0.17929,0.077989,0.9807,65.194,-0.43179,-0.90195,-0.0072125,97.532,0.88398,-0.42475,0.19538,159.31 |
| 20801 | | |
| 20802 | | > ui mousemode right "translate selected models" |
| 20803 | | |
| 20804 | | > view matrix models |
| 20805 | | > #19,-0.17929,0.077989,0.9807,81.945,-0.43179,-0.90195,-0.0072125,151.55,0.88398,-0.42475,0.19538,146.82 |
| 20806 | | |
| 20807 | | > fitmap #19 inMap #15 |
| 20808 | | |
| 20809 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20810 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20811 | | average map value = 0.05751, steps = 268 |
| 20812 | | shifted from previous position = 30.8 |
| 20813 | | rotated from previous position = 8.28 degrees |
| 20814 | | atoms outside contour = 2102, contour level = 0.054102 |
| 20815 | | |
| 20816 | | Position of ranked_4-2.pdb (#19) relative to |
| 20817 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20818 | | Matrix rotation and translation |
| 20819 | | -0.11847249 0.72559613 -0.67784551 139.44955504 |
| 20820 | | 0.45369650 0.64678371 0.61305002 127.60853080 |
| 20821 | | 0.88324615 -0.23490657 -0.40582650 177.23007446 |
| 20822 | | Axis -0.47181808 -0.86861908 -0.15128978 |
| 20823 | | Axis point -17.58411985 0.00000000 93.12592541 |
| 20824 | | Rotation angle (degrees) 116.02464037 |
| 20825 | | Shift along axis -203.45112417 |
| 20826 | | |
| 20827 | | |
| 20828 | | > view matrix models |
| 20829 | | > #19,-0.13209,0.038453,0.99049,107.33,-0.54189,-0.83951,-0.039673,146.55,0.83001,-0.54197,0.13173,167.19 |
| 20830 | | |
| 20831 | | > fitmap #19 inMap #15 |
| 20832 | | |
| 20833 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20834 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20835 | | average map value = 0.06102, steps = 116 |
| 20836 | | shifted from previous position = 1.6 |
| 20837 | | rotated from previous position = 12.4 degrees |
| 20838 | | atoms outside contour = 1999, contour level = 0.054102 |
| 20839 | | |
| 20840 | | Position of ranked_4-2.pdb (#19) relative to |
| 20841 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20842 | | Matrix rotation and translation |
| 20843 | | 0.04585068 0.79490916 -0.60499351 138.68018304 |
| 20844 | | 0.37088998 0.54879410 0.74917665 133.24650968 |
| 20845 | | 0.92754425 -0.25873629 -0.26966126 176.42880770 |
| 20846 | | Axis -0.53537064 -0.81403432 -0.22522522 |
| 20847 | | Axis point -29.08588556 0.00000000 78.24866014 |
| 20848 | | Rotation angle (degrees) 109.72513528 |
| 20849 | | Shift along axis -222.44874833 |
| 20850 | | |
| 20851 | | |
| 20852 | | > view matrix models |
| 20853 | | > #19,-0.30601,-0.048557,0.95079,89.36,-0.57143,-0.78942,-0.22423,133.5,0.76146,-0.61193,0.21383,186.29 |
| 20854 | | |
| 20855 | | > volume #15 step 2 |
| 20856 | | |
| 20857 | | > select add #15 |
| 20858 | | |
| 20859 | | 3495 atoms, 3537 bonds, 233 residues, 3 models selected |
| 20860 | | |
| 20861 | | > select subtract #15 |
| 20862 | | |
| 20863 | | 3495 atoms, 3537 bonds, 233 residues, 1 model selected |
| 20864 | | |
| 20865 | | > ui mousemode right "rotate selected models" |
| 20866 | | |
| 20867 | | > view matrix models |
| 20868 | | > #19,-0.28738,-0.94627,0.14831,89.738,-0.38016,-0.02944,-0.92445,139.56,0.87914,-0.32205,-0.35127,189.98 |
| 20869 | | |
| 20870 | | > view matrix models |
| 20871 | | > #19,-0.5382,-0.81862,0.20051,89.774,-0.75295,0.36011,-0.55081,139,0.3787,-0.44741,-0.81019,191.22 |
| 20872 | | |
| 20873 | | > view matrix models |
| 20874 | | > #19,-0.99192,0.047489,0.11762,92.944,-0.12108,-0.63087,-0.76639,136.86,0.037808,-0.77444,0.63152,183.27 |
| 20875 | | |
| 20876 | | > view matrix models |
| 20877 | | > #19,-0.025662,0.067898,0.99736,89.786,-0.052559,-0.9964,0.06648,131.83,0.99829,-0.050715,0.029138,189.34 |
| 20878 | | |
| 20879 | | > view matrix models |
| 20880 | | > #19,-0.24204,0.039351,0.96947,89.643,-0.2998,-0.95332,-0.036156,132.26,0.92279,-0.2994,0.24254,187.42 |
| 20881 | | |
| 20882 | | > view matrix models |
| 20883 | | > #19,-0.46131,0.046853,0.886,89.88,-0.22931,-0.97097,-0.068047,132.39,0.85709,-0.23456,0.45866,186.63 |
| 20884 | | |
| 20885 | | > view matrix models |
| 20886 | | > #19,-0.49837,0.047699,0.86565,89.947,-0.24379,-0.96591,-0.087131,132.49,0.83198,-0.25446,0.49301,186.38 |
| 20887 | | |
| 20888 | | > ui mousemode right "translate selected models" |
| 20889 | | |
| 20890 | | > view matrix models |
| 20891 | | > #19,-0.49837,0.047699,0.86565,104.84,-0.24379,-0.96591,-0.087131,142.12,0.83198,-0.25446,0.49301,186.95 |
| 20892 | | |
| 20893 | | > fitmap #19 inMap #15 |
| 20894 | | |
| 20895 | | Fit molecule ranked_4-2.pdb (#19) to map |
| 20896 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) using 3495 atoms |
| 20897 | | average map value = 0.06046, steps = 232 |
| 20898 | | shifted from previous position = 14.8 |
| 20899 | | rotated from previous position = 23 degrees |
| 20900 | | atoms outside contour = 2088, contour level = 0.054102 |
| 20901 | | |
| 20902 | | Position of ranked_4-2.pdb (#19) relative to |
| 20903 | | cryosparc_P1095_J77_008_volume_map_sharp.mrc (#15) coordinates: |
| 20904 | | Matrix rotation and translation |
| 20905 | | 0.23596387 0.75517369 -0.61158299 132.69137637 |
| 20906 | | -0.19458905 0.65332698 0.73164128 130.20947674 |
| 20907 | | 0.95207991 -0.05363356 0.30111010 182.65375151 |
| 20908 | | Axis -0.39442887 -0.78539863 -0.47704807 |
| 20909 | | Axis point -13.51053939 0.00000000 77.93768700 |
| 20910 | | Rotation angle (degrees) 84.53714169 |
| 20911 | | Shift along axis -241.73827319 |
| 20912 | | |
| 20913 | | |
| 20914 | | > view matrix models |
| 20915 | | > #19,-0.76187,-0.072025,0.64371,58.653,-0.21661,-0.90825,-0.35799,134.42,0.61044,-0.41218,0.67637,176.74 |
| 20916 | | |
| 20917 | | > view matrix models |
| 20918 | | > #19,-0.76187,-0.072025,0.64371,58.523,-0.21661,-0.90825,-0.35799,134.34,0.61044,-0.41218,0.67637,176.73 |
| 20919 | | |
| 20920 | | > hide #!15 models |
| 20921 | | |
| 20922 | | > hide #19 models |
| 20923 | | |
| 20924 | | > select subtract #19 |
| 20925 | | |
| 20926 | | Nothing selected |
| 20927 | | |
| 20928 | | > open "/Users/mansoore.esmaili/Documents/Apoferritin human/emd_20026.map" |
| 20929 | | |
| 20930 | | Opened emd_20026.map as #20, grid size 336,336,336, pixel 0.65, shown at level |
| 20931 | | 0.0202, step 2, values float32 |
| 20932 | | |
| 20933 | | > surface dust #20 size 6.5 |
| 20934 | | |
| 20935 | | > open /Users/mansoore.esmaili/Downloads/2iu2-sf.cif |
| 20936 | | |
| 20937 | | Summary of feedback from opening /Users/mansoore.esmaili/Downloads/2iu2-sf.cif |
| 20938 | | --- |
| 20939 | | warning | No mmCIF models found. |
| 20940 | | |
| 20941 | | |
| 20942 | | > open /Users/mansoore.esmaili/Downloads/2iu2-sf.cif |
| 20943 | | |
| 20944 | | Summary of feedback from opening /Users/mansoore.esmaili/Downloads/2iu2-sf.cif |
| 20945 | | --- |
| 20946 | | warning | No mmCIF models found. |
| 20947 | | |
| 20948 | | |
| 20949 | | > open 2IU2 fromDatabase pdb format mmcif |
| 20950 | | |
| 20951 | | Summary of feedback from opening 2IU2 fetched from pdb |
| 20952 | | --- |
| 20953 | | warnings | Unable to fetch template for 'GOL': will use incomplete information in mmCIF file |
| 20954 | | Unable to fetch template for 'ZN': will connect using distance criteria |
| 20955 | | note | Fetching compressed mmCIF 2iu2 from http://files.rcsb.org/download/2iu2.cif |
| 20956 | | |
| 20957 | | 2iu2 title: |
| 20958 | | Recombinant human H ferritin, K86Q, E27D and E107D mutant, soaked with Zn ions |
| 20959 | | [more info...] |
| 20960 | | |
| 20961 | | Chain information for 2iu2 #21 |
| 20962 | | --- |
| 20963 | | Chain | Description | UniProt |
| 20964 | | A | FERRITIN HEAVY CHAIN | FRIH_HUMAN 1-182 |
| 20965 | | |
| 20966 | | Non-standard residues in 2iu2 #21 |
| 20967 | | --- |
| 20968 | | GOL — glycerol (glycerin; propane-1,2,3-triol) |
| 20969 | | ZN — zinc ion |
| 20970 | | |
| 20971 | | 2iu2 mmCIF Assemblies |
| 20972 | | --- |
| 20973 | | 1| author_and_software_defined_assembly |
| 20974 | | |
| 20975 | | |
| 20976 | | > fitmap #21 inMap #20 |
| 20977 | | |
| 20978 | | Fit molecule 2iu2 (#21) to map emd_20026.map (#20) using 1575 atoms |
| 20979 | | average map value = 8.469e-06, steps = 188 |
| 20980 | | shifted from previous position = 2.28 |
| 20981 | | rotated from previous position = 5.65 degrees |
| 20982 | | atoms outside contour = 1575, contour level = 0.020173 |
| 20983 | | |
| 20984 | | Position of 2iu2 (#21) relative to emd_20026.map (#20) coordinates: |
| 20985 | | Matrix rotation and translation |
| 20986 | | 0.99906782 0.00938804 0.04213486 -0.39039547 |
| 20987 | | -0.01308327 0.99600800 0.08830002 -2.30177174 |
| 20988 | | -0.04113769 -0.08876897 0.99520237 3.03210410 |
| 20989 | | Axis -0.89901614 0.42279203 -0.11409154 |
| 20990 | | Axis point 0.00000000 31.67721775 22.86417167 |
| 20991 | | Rotation angle (degrees) 5.65160974 |
| 20992 | | Shift along axis -0.96813634 |
| 20993 | | |
| 20994 | | |
| 20995 | | > volume #15 step 4 |
| 20996 | | |
| 20997 | | > volume #20 level 0.03132 |
| 20998 | | |
| 20999 | | > color #21 #f7f44dff |
| 21000 | | |
| 21001 | | > color #21 #f84350ff |
| 21002 | | |
| 21003 | | > hide #!21 models |
| 21004 | | |
| 21005 | | > open /Users/mansoore.esmaili/Downloads/2iu2.pdb1 |
| 21006 | | |
| 21007 | | 2iu2.pdb1 title: |
| 21008 | | Recombinant human H ferritin, K86Q, E27D and E107D mutant, soaked with Zn ions |
| 21009 | | [more info...] |
| 21010 | | |
| 21011 | | Chain information for 2iu2.pdb1 |
| 21012 | | --- |
| 21013 | | Chain | Description |
| 21014 | | 22.1/A | No description available |
| 21015 | | 22.2/A 22.3/A 22.4/A 22.5/A 22.6/A 22.7/A 22.8/A 22.9/A 22.10/A 22.11/A 22.12/A 22.13/A 22.14/A 22.15/A 22.16/A 22.17/A 22.18/A 22.19/A 22.20/A 22.21/A 22.22/A 22.23/A 22.24/A | No description available |
| 21016 | | |
| 21017 | | |
| 21018 | | > ui mousemode right "move picked models" |
| 21019 | | |
| 21020 | | > view matrix models #22.1,1,0,0,41.361,0,1,0,27.875,0,0,1,-2.2457 |
| 21021 | | |
| 21022 | | > hide #!22 models |
| 21023 | | |
| 21024 | | > show #!22 models |
| 21025 | | |
| 21026 | | > close #22 |
| 21027 | | |
| 21028 | | > open /Users/mansoore.esmaili/Downloads/2iu2.pdb1 |
| 21029 | | |
| 21030 | | 2iu2.pdb1 title: |
| 21031 | | Recombinant human H ferritin, K86Q, E27D and E107D mutant, soaked with Zn ions |
| 21032 | | [more info...] |
| 21033 | | |
| 21034 | | Chain information for 2iu2.pdb1 |
| 21035 | | --- |
| 21036 | | Chain | Description |
| 21037 | | 22.1/A | No description available |
| 21038 | | 22.2/A 22.3/A 22.4/A 22.5/A 22.6/A 22.7/A 22.8/A 22.9/A 22.10/A 22.11/A 22.12/A 22.13/A 22.14/A 22.15/A 22.16/A 22.17/A 22.18/A 22.19/A 22.20/A 22.21/A 22.22/A 22.23/A 22.24/A | No description available |
| 21039 | | |
| 21040 | | |
| 21041 | | > select add #21 |
| 21042 | | |
| 21043 | | 1575 atoms, 1445 bonds, 9 pseudobonds, 331 residues, 2 models selected |
| 21044 | | |
| 21045 | | > select subtract #21 |
| 21046 | | |
| 21047 | | Nothing selected |
| 21048 | | |
| 21049 | | > select add #22 |
| 21050 | | |
| 21051 | | 37800 atoms, 34680 bonds, 9 pseudobonds, 7944 residues, 26 models selected |
| 21052 | | |
| 21053 | | > ui mousemode right "translate selected models" |
| 21054 | | |
| 21055 | | > view matrix models #22,1,0,0,123.58,0,1,0,82.532,0,0,1,-6.5287 |
| 21056 | | |
| 21057 | | > volume #20 level 0.02405 |
| 21058 | | |
| 21059 | | > fitmap #22.1 inMap #20 |
| 21060 | | |
| 21061 | | Fit molecule 2iu2.pdb1 (#22.1) to map emd_20026.map (#20) using 1575 atoms |
| 21062 | | average map value = 0.0001456, steps = 2000 |
| 21063 | | shifted from previous position = 0.959 |
| 21064 | | rotated from previous position = 4.13 degrees |
| 21065 | | atoms outside contour = 1575, contour level = 0.02405 |
| 21066 | | |
| 21067 | | Position of 2iu2.pdb1 (#22.1) relative to emd_20026.map (#20) coordinates: |
| 21068 | | Matrix rotation and translation |
| 21069 | | 0.99920638 -0.00500547 0.03951663 -0.89288650 |
| 21070 | | 0.00262172 0.99818617 0.06014559 -2.44851180 |
| 21071 | | -0.03974601 -0.05999425 0.99740711 0.33325107 |
| 21072 | | Axis -0.83353458 0.54992710 0.05291778 |
| 21073 | | Axis point 0.00000000 4.53604910 35.50124224 |
| 21074 | | Rotation angle (degrees) 4.13268882 |
| 21075 | | Shift along axis -0.58461630 |
| 21076 | | |
| 21077 | | |
| 21078 | | > select subtract #22 |
| 21079 | | |
| 21080 | | Nothing selected |
| 21081 | | |
| 21082 | | > close #22 |
| 21083 | | |
| 21084 | | > open /Users/mansoore.esmaili/Downloads/2iu2-sf.cif |
| 21085 | | |
| 21086 | | Summary of feedback from opening /Users/mansoore.esmaili/Downloads/2iu2-sf.cif |
| 21087 | | --- |
| 21088 | | warning | No mmCIF models found. |
| 21089 | | |
| 21090 | | |
| 21091 | | > show #!21 models |
| 21092 | | |
| 21093 | | > hide #!21 models |
| 21094 | | |
| 21095 | | > close #21 |
| 21096 | | |
| 21097 | | > select add #20 |
| 21098 | | |
| 21099 | | 2 models selected |
| 21100 | | |
| 21101 | | > select subtract #20 |
| 21102 | | |
| 21103 | | Nothing selected |
| 21104 | | |
| 21105 | | > open /Users/mansoore.esmaili/Downloads/2iu2-assembly1.cif |
| 21106 | | |
| 21107 | | Summary of feedback from opening |
| 21108 | | /Users/mansoore.esmaili/Downloads/2iu2-assembly1.cif |
| 21109 | | --- |
| 21110 | | warnings | Unable to fetch template for 'GOL': will connect using distance criteria |
| 21111 | | Unable to fetch template for 'ZN': will connect using distance criteria |
| 21112 | | notes | Combining 4 symmetry atoms into HOH /A-15:2150 O |
| 21113 | | Combining 4 symmetry atoms into ZN /A-15:214 ZN |
| 21114 | | Combining 2 symmetry atoms into HOH /A-15:2036 O |
| 21115 | | Combining 2 symmetry atoms into HOH /A-22:2036 O |
| 21116 | | Combining 2 symmetry atoms into HOH /A-12:2036 O |
| 21117 | | Combining 2 symmetry atoms into HOH /A-18:2036 O |
| 21118 | | Combining 3 symmetry atoms into HOH /A-19:2152 O |
| 21119 | | Combining 3 symmetry atoms into HOH /A-10:2152 O |
| 21120 | | Combining 3 symmetry atoms into HOH /A-21:2152 O |
| 21121 | | Combining 3 symmetry atoms into HOH /A-14:2152 O |
| 21122 | | Combining 3 symmetry atoms into ZN /A-19:211 ZN |
| 21123 | | 3 messages similar to the above omitted |
| 21124 | | Combining 4 symmetry atoms into HOH /A-2:2150 O |
| 21125 | | Combining 4 symmetry atoms into ZN /A-2:214 ZN |
| 21126 | | Combining 2 symmetry atoms into HOH /A-9:2036 O |
| 21127 | | Combining 2 symmetry atoms into HOH /A-3:2036 O |
| 21128 | | Combining 4 symmetry atoms into HOH /A-8:2150 O |
| 21129 | | Combining 4 symmetry atoms into ZN /A-8:214 ZN |
| 21130 | | Combining 4 symmetry atoms into ZN /A-3:214 ZN |
| 21131 | | Combining 4 symmetry atoms into HOH /A-3:2150 O |
| 21132 | | Combining 2 symmetry atoms into HOH /A-16:2036 O |
| 21133 | | Combining 2 symmetry atoms into HOH /A-7:2036 O |
| 21134 | | Combining 4 symmetry atoms into ZN /A-7:214 ZN |
| 21135 | | Combining 4 symmetry atoms into HOH /A-7:2150 O |
| 21136 | | Combining 3 symmetry atoms into ZN /A-6:211 ZN |
| 21137 | | Combining 3 symmetry atoms into ZN /A:211 ZN |
| 21138 | | Combining 3 symmetry atoms into ZN /A-11:211 ZN |
| 21139 | | Combining 3 symmetry atoms into ZN /A-4:211 ZN |
| 21140 | | Combining 3 symmetry atoms into HOH /A-6:2152 O |
| 21141 | | 3 messages similar to the above omitted |
| 21142 | | Combining 2 symmetry atoms into HOH /A-2:2036 O |
| 21143 | | Combining 2 symmetry atoms into HOH /A-8:2036 O |
| 21144 | | Combining 2 symmetry atoms into HOH /A:2036 O |
| 21145 | | Combining 2 symmetry atoms into HOH /A-5:2036 O |
| 21146 | | Combining 4 symmetry atoms into ZN /A:214 ZN |
| 21147 | | Combining 4 symmetry atoms into HOH /A:2150 O |
| 21148 | | |
| 21149 | | 2iu2-assembly1.cif title: |
| 21150 | | Recombinant human H ferritin, K86Q, E27D and E107D mutant, soaked with Zn ions |
| 21151 | | [more info...] |
| 21152 | | |
| 21153 | | Chain information for 2iu2-assembly1.cif #21 |
| 21154 | | --- |
| 21155 | | Chain | Description |
| 21156 | | A A-10 A-11 A-12 A-13 A-14 A-15 A-16 A-17 A-18 A-19 A-2 A-20 A-21 A-22 A-23 A-24 A-3 A-4 A-5 A-6 A-7 A-8 A-9 | FERRITIN HEAVY CHAIN |
| 21157 | | |
| 21158 | | Non-standard residues in 2iu2-assembly1.cif #21 |
| 21159 | | --- |
| 21160 | | GOL — glycerol (glycerin; propane-1,2,3-triol) |
| 21161 | | ZN — zinc ion |
| 21162 | | |
| 21163 | | |
| 21164 | | > hide #!20 models |
| 21165 | | |
| 21166 | | > show #!20 models |
| 21167 | | |
| 21168 | | > select add #21 |
| 21169 | | |
| 21170 | | 37720 atoms, 34680 bonds, 7864 residues, 1 model selected |
| 21171 | | |
| 21172 | | > rainbow sel |
| 21173 | | |
| 21174 | | > show sel cartoons |
| 21175 | | |
| 21176 | | > hide sel surfaces |
| 21177 | | |
| 21178 | | [Repeated 1 time(s)] |
| 21179 | | |
| 21180 | | > coulombic sel |
| 21181 | | |
| 21182 | | Using Amber 20 recommended default charges and atom types for standard |
| 21183 | | residues |
| 21184 | | Coulombic values for 2iu2-assembly1.cif_A SES surface #21.1: minimum, -26.80, |
| 21185 | | mean -3.70, maximum 14.29 |
| 21186 | | Coulombic values for 2iu2-assembly1.cif_A-10 SES surface #21.2: minimum, |
| 21187 | | -27.56, mean -3.70, maximum 14.06 |
| 21188 | | Coulombic values for 2iu2-assembly1.cif_A-11 SES surface #21.3: minimum, |
| 21189 | | -26.80, mean -3.71, maximum 14.29 |
| 21190 | | Coulombic values for 2iu2-assembly1.cif_A-12 SES surface #21.4: minimum, |
| 21191 | | -20.56, mean -3.98, maximum 14.03 |
| 21192 | | Coulombic values for 2iu2-assembly1.cif_A-13 SES surface #21.5: minimum, |
| 21193 | | -24.79, mean -4.00, maximum 14.08 |
| 21194 | | Coulombic values for 2iu2-assembly1.cif_A-14 SES surface #21.6: minimum, |
| 21195 | | -26.80, mean -3.72, maximum 14.29 |
| 21196 | | Coulombic values for 2iu2-assembly1.cif_A-15 SES surface #21.7: minimum, |
| 21197 | | -24.98, mean -4.00, maximum 13.48 |
| 21198 | | Coulombic values for 2iu2-assembly1.cif_A-16 SES surface #21.8: minimum, |
| 21199 | | -25.50, mean -3.99, maximum 13.91 |
| 21200 | | Coulombic values for 2iu2-assembly1.cif_A-17 SES surface #21.9: minimum, |
| 21201 | | -25.12, mean -3.69, maximum 13.95 |
| 21202 | | Coulombic values for 2iu2-assembly1.cif_A-18 SES surface #21.10: minimum, |
| 21203 | | -24.79, mean -4.01, maximum 14.08 |
| 21204 | | Coulombic values for 2iu2-assembly1.cif_A-19 SES surface #21.11: minimum, |
| 21205 | | -24.00, mean -3.69, maximum 13.54 |
| 21206 | | Coulombic values for 2iu2-assembly1.cif_A-2 SES surface #21.12: minimum, |
| 21207 | | -22.93, mean -3.69, maximum 13.95 |
| 21208 | | Coulombic values for 2iu2-assembly1.cif_A-20 SES surface #21.13: minimum, |
| 21209 | | -25.07, mean -3.99, maximum 13.50 |
| 21210 | | Coulombic values for 2iu2-assembly1.cif_A-21 SES surface #21.14: minimum, |
| 21211 | | -20.32, mean -3.69, maximum 14.07 |
| 21212 | | Coulombic values for 2iu2-assembly1.cif_A-22 SES surface #21.15: minimum, |
| 21213 | | -24.35, mean -4.00, maximum 13.50 |
| 21214 | | Coulombic values for 2iu2-assembly1.cif_A-23 SES surface #21.16: minimum, |
| 21215 | | -27.56, mean -3.69, maximum 14.06 |
| 21216 | | Coulombic values for 2iu2-assembly1.cif_A-24 SES surface #21.17: minimum, |
| 21217 | | -26.27, mean -4.00, maximum 13.48 |
| 21218 | | Coulombic values for 2iu2-assembly1.cif_A-3 SES surface #21.18: minimum, |
| 21219 | | -24.79, mean -4.01, maximum 14.08 |
| 21220 | | Coulombic values for 2iu2-assembly1.cif_A-4 SES surface #21.19: minimum, |
| 21221 | | -20.22, mean -3.70, maximum 14.33 |
| 21222 | | Coulombic values for 2iu2-assembly1.cif_A-5 SES surface #21.20: minimum, |
| 21223 | | -20.52, mean -4.00, maximum 14.28 |
| 21224 | | Coulombic values for 2iu2-assembly1.cif_A-6 SES surface #21.21: minimum, |
| 21225 | | -20.32, mean -3.69, maximum 14.07 |
| 21226 | | Coulombic values for 2iu2-assembly1.cif_A-7 SES surface #21.22: minimum, |
| 21227 | | -20.52, mean -3.99, maximum 14.28 |
| 21228 | | Coulombic values for 2iu2-assembly1.cif_A-8 SES surface #21.23: minimum, |
| 21229 | | -27.56, mean -3.69, maximum 14.06 |
| 21230 | | Coulombic values for 2iu2-assembly1.cif_A-9 SES surface #21.24: minimum, |
| 21231 | | -24.98, mean -4.00, maximum 13.48 |
| 21232 | | To also show corresponding color key, enter the above coulombic command and |
| 21233 | | add key true |
| 21234 | | |
| 21235 | | > color sel bychain |
| 21236 | | |
| 21237 | | > show sel surfaces |
| 21238 | | |
| 21239 | | > hide sel surfaces |
| 21240 | | |
| 21241 | | > hide sel cartoons |
| 21242 | | |
| 21243 | | > hide sel atoms |
| 21244 | | |
| 21245 | | > show sel atoms |
| 21246 | | |
| 21247 | | > style sel sphere |
| 21248 | | |
| 21249 | | Changed 37720 atom styles |
| | 3735 | [deleted to fit within ticket limits] |