MTZ file missing or corrupted

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform:        Windows-10-10.0.19045
ChimeraX Version: 1.8 (2024-06-10 23:15:52 UTC)
Description
(Describe the actions that caused this problem to occur here)

Log:
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 1.8 (2024-06-10)  
© 2016-2024 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  
Successfully installed 'ChimeraX_Clipper-0.23.1-cp311-cp311-win_amd64.whl'  
Looking in indexes: https://pypi.org/simple,
https://cxtoolshed.rbvi.ucsf.edu/pypi/  
Processing
c:\users\raffae~1\appdata\local\ucsf\chimerax\cache\1.8\installers\chimerax_clipper-0.23.1-cp311-cp311-win_amd64.whl  
Requirement already satisfied: ChimeraX-Core~=1.8.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-Clipper==0.23.1) (1.8)  
Requirement already satisfied: ChimeraX-Atomic~=1.57 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-Clipper==0.23.1)
(1.57.1)  
Requirement already satisfied: ChimeraX-AtomicLibrary~=14.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-Clipper==0.23.1)
(14.0.6)  
Requirement already satisfied: ChimeraX-Arrays~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-Clipper==0.23.1) (1.1)  
Requirement already satisfied: ChimeraX-ConnectStructure~=2.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (2.0.1)  
Requirement already satisfied: ChimeraX-Geometry~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.3)  
Requirement already satisfied: ChimeraX-Graphics~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.1.1)  
Requirement already satisfied: ChimeraX-mmCIF~=2.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (2.14.1)  
Requirement already satisfied: ChimeraX-Nucleotides~=2.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (2.0.3)  
Requirement already satisfied: ChimeraX-PDB~=2.0 in c:\program files\chimerax
1.8\bin\lib\site-packages (from ChimeraX-Atomic~=1.57->ChimeraX-
Clipper==0.23.1) (2.7.5)  
Requirement already satisfied: ChimeraX-PDBLibrary~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.0.4)  
Requirement already satisfied: ChimeraX-DataFormats~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-mmCIF~=2.0->ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.2.3)  
Requirement already satisfied: ChimeraX-OpenCommand~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-mmCIF~=2.0->ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.13.5)  
Requirement already satisfied: ChimeraX-SaveCommand~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-mmCIF~=2.0->ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.5.1)  
Requirement already satisfied: ChimeraX-Surface~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
Nucleotides~=2.0->ChimeraX-Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.0.1)  
Requirement already satisfied: ChimeraX-UI~=1.0 in c:\program files\chimerax
1.8\bin\lib\site-packages (from ChimeraX-Nucleotides~=2.0->ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.39.1)  
Requirement already satisfied: ChimeraX-IO~=1.0.1 in c:\program files\chimerax
1.8\bin\lib\site-packages (from ChimeraX-PDB~=2.0->ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.0.1)  
Requirement already satisfied: ChimeraX-Map~=1.0 in c:\program files\chimerax
1.8\bin\lib\site-packages (from ChimeraX-Surface~=1.0->ChimeraX-
Nucleotides~=2.0->ChimeraX-Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.2)  
Requirement already satisfied: ChimeraX-MapData~=2.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
Surface~=1.0->ChimeraX-Nucleotides~=2.0->ChimeraX-Atomic~=1.57->ChimeraX-
Clipper==0.23.1) (2.0)  
Requirement already satisfied: ChimeraX-StdCommands~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
Surface~=1.0->ChimeraX-Nucleotides~=2.0->ChimeraX-Atomic~=1.57->ChimeraX-
Clipper==0.23.1) (1.16.5)  
Requirement already satisfied: ChimeraX-MouseModes~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-UI~=1.0->ChimeraX-
Nucleotides~=2.0->ChimeraX-Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.2)  
Requirement already satisfied: ChimeraX-SelInspector~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-UI~=1.0->ChimeraX-
Nucleotides~=2.0->ChimeraX-Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.0)  
Requirement already satisfied: ChimeraX-MapFilter~=2.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-Map~=1.0->ChimeraX-
Surface~=1.0->ChimeraX-Nucleotides~=2.0->ChimeraX-Atomic~=1.57->ChimeraX-
Clipper==0.23.1) (2.0.1)  
Requirement already satisfied: ChimeraX-MapSeries~=2.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-Map~=1.0->ChimeraX-
Surface~=1.0->ChimeraX-Nucleotides~=2.0->ChimeraX-Atomic~=1.57->ChimeraX-
Clipper==0.23.1) (2.1.1)  
Requirement already satisfied: ChimeraX-ItemsInspection~=1.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
SelInspector~=1.0->ChimeraX-UI~=1.0->ChimeraX-Nucleotides~=2.0->ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.0.1)  
Requirement already satisfied: ChimeraX-DistMonitor~=1.2 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
StdCommands~=1.0->ChimeraX-Surface~=1.0->ChimeraX-Nucleotides~=2.0->ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (1.4.2)  
Requirement already satisfied: ChimeraX-Dssp~=2.0 in c:\program files\chimerax
1.8\bin\lib\site-packages (from ChimeraX-StdCommands~=1.0->ChimeraX-
Surface~=1.0->ChimeraX-Nucleotides~=2.0->ChimeraX-Atomic~=1.57->ChimeraX-
Clipper==0.23.1) (2.0)  
Requirement already satisfied: ChimeraX-MapFit~=2.0 in c:\program
files\chimerax 1.8\bin\lib\site-packages (from ChimeraX-
StdCommands~=1.0->ChimeraX-Surface~=1.0->ChimeraX-Nucleotides~=2.0->ChimeraX-
Atomic~=1.57->ChimeraX-Clipper==0.23.1) (2.0)  
ChimeraX-Clipper is already installed with the same version as the provided
wheel. Use --force-reinstall to force an installation of the wheel.  
  

  
[notice] A new release of pip is available: 24.0 -> 24.3.1  
[notice] To update, run: C:\Program Files\ChimeraX 1.8\bin\ChimeraX.exe -m pip
install --upgrade pip  
  

> open "C:/Users/RaffaelaD’Auria/OneDrive - Momentous Therapeutics
> Ltd/Desktop/Projects/Crystallography/03.2024 Diamond/MTX_287-G11.pdb"

MTX_287-G11.pdb title:  
\--- [more info...]  
  
Chain information for MTX_287-G11.pdb #1  
---  
Chain | Description  
A | No description available  
  
6 atoms have alternate locations. Control/examine alternate locations with
Altloc Explorer [start tool...] or the altlocs command.  

> open "C:/Users/RaffaelaD’Auria/OneDrive - Momentous Therapeutics
> Ltd/Desktop/Projects/Crystallography/03.2024 Diamond/MTX287-G11 best
> mammalian.mtz"

Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-
packages\chimerax\ui\graphics.py", line 54, in event  
if self.handle_drag_and_drop(event):  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-
packages\chimerax\ui\graphics.py", line 124, in handle_drag_and_drop  
mw.dropEvent(event)  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-packages\chimerax\ui\gui.py",
line 697, in dropEvent  
_open_dropped_file(self.session, p)  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-packages\chimerax\ui\gui.py",
line 2075, in _open_dropped_file  
run(session, 'open %s' % FileNameArg.unparse(path))  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run  
results = command.run(text, log=log, return_json=return_json)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run  
result = ci.function(session, **kw_args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-
packages\chimerax\open_command\cmd.py", line 131, in cmd_open  
models = Command(session, registry=registry).run(provider_cmd_text,
log=log)[0]  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run  
result = ci.function(session, **kw_args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-
packages\chimerax\open_command\cmd.py", line 213, in provider_open  
models, status = collated_open(session, None, [data], data_format,
_add_models,  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-
packages\chimerax\open_command\cmd.py", line 513, in collated_open  
return remember_data_format()  
^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Program Files\ChimeraX 1.8\bin\Lib\site-
packages\chimerax\open_command\cmd.py", line 484, in remember_data_format  
models, status = func(*func_args, **func_kw)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Users\RAFFAE~1\AppData\Local\UCSF\ChimeraX\1.8\Python311\site-
packages\chimerax\clipper\\__init__.py", line 244, in open  
return open_structure_factors(session, data, **kw)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Users\RAFFAE~1\AppData\Local\UCSF\ChimeraX\1.8\Python311\site-
packages\chimerax\clipper\cmd.py", line 52, in open_structure_factors  
raise e  
File "C:\Users\RAFFAE~1\AppData\Local\UCSF\ChimeraX\1.8\Python311\site-
packages\chimerax\clipper\cmd.py", line 32, in open_structure_factors  
xmapset = mmgr.add_xmapset_from_file(path, oversampling_rate=over_sampling,  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Users\RAFFAE~1\AppData\Local\UCSF\ChimeraX\1.8\Python311\site-
packages\chimerax\clipper\maps\map_mgr.py", line 292, in add_xmapset_from_file  
mtzdata = ReflectionDataContainer(self.session, sffile,  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Users\RAFFAE~1\AppData\Local\UCSF\ChimeraX\1.8\Python311\site-
packages\chimerax\clipper\clipper_mtz.py", line 54, in __init__  
self._init_from_hkl_file(hklfile, free_flag_label,
auto_choose_reflection_data,  
File "C:\Users\RAFFAE~1\AppData\Local\UCSF\ChimeraX\1.8\Python311\site-
packages\chimerax\clipper\clipper_mtz.py", line 62, in _init_from_hkl_file  
hklinfo, free, exp, calc = load_hkl_data(self.session, hklfile,  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Users\RAFFAE~1\AppData\Local\UCSF\ChimeraX\1.8\Python311\site-
packages\chimerax\clipper\clipper_mtz.py", line 430, in load_hkl_data  
(hklinfo, free, expt, calc) = load_mtz_data(  
^^^^^^^^^^^^^^  
File "C:\Users\RAFFAE~1\AppData\Local\UCSF\ChimeraX\1.8\Python311\site-
packages\chimerax\clipper\clipper_mtz.py", line 537, in load_mtz_data  
hklinfo, crystal_dict = mtz_read.load_mtz_data(session, filename,
load_map_coeffs=load_map_coeffs)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "C:\Users\RAFFAE~1\AppData\Local\UCSF\ChimeraX\1.8\Python311\site-
packages\chimerax\clipper\io\mtz_read.py", line 75, in load_mtz_data  
mtzin.open_read(filename)  
RuntimeError: CCP4MTZfile: open_read - File missing or corrupted:
C:\Users\RaffaelaD’Auria\OneDrive - Momentous Therapeutics
Ltd\Desktop\Projects\Crystallography\03.2024 Diamond\MTX287-G11 best
mammalian.mtz  
  
RuntimeError: CCP4MTZfile: open_read - File missing or corrupted:
C:\Users\RaffaelaD’Auria\OneDrive - Momentous Therapeutics
Ltd\Desktop\Projects\Crystallography\03.2024 Diamond\MTX287-G11 best
mammalian.mtz  
  
File "C:\Users\RAFFAE~1\AppData\Local\UCSF\ChimeraX\1.8\Python311\site-
packages\chimerax\clipper\io\mtz_read.py", line 75, in load_mtz_data  
mtzin.open_read(filename)  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 - Build 31.0.101.4255
OpenGL renderer: Intel(R) Iris(R) Xe Graphics
OpenGL vendor: Intel

Python: 3.11.4
Locale: en_GB.cp1252
Qt version: PyQt6 6.6.1, Qt 6.6.1
Qt runtime version: 6.6.3
Qt platform: windows

Manufacturer: HP
Model: HP ProBook 450 15.6 inch G9 Notebook PC
OS: Microsoft Windows 10 Pro (Build 19045)
Memory: 16,794,492,928
MaxProcessMemory: 137,438,953,344
CPU: 12 12th Gen Intel(R) Core(TM) i5-1235U
OSLanguage: en-GB

Installed Packages:
    alabaster: 0.7.16
    appdirs: 1.4.4
    asttokens: 2.4.1
    Babel: 2.15.0
    beautifulsoup4: 4.12.3
    blockdiag: 3.0.0
    blosc2: 2.0.0
    build: 1.2.1
    certifi: 2024.6.2
    cftime: 1.6.4
    charset-normalizer: 3.3.2
    ChimeraX-AddCharge: 1.5.17
    ChimeraX-AddH: 2.2.6
    ChimeraX-AlignmentAlgorithms: 2.0.2
    ChimeraX-AlignmentHdrs: 3.5
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.12.7
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.1.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.57.1
    ChimeraX-AtomicLibrary: 14.0.6
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.4.6
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.12.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.7
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.4
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-Clipper: 0.23.1
    ChimeraX-ColorActions: 1.0.5
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.6
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.8
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.3
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2.4
    ChimeraX-DiffPlot: 1.0
    ChimeraX-DistMonitor: 1.4.2
    ChimeraX-DockPrep: 1.1.3
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-Label: 1.1.10
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.1.6
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.2
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.1.3
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.7.1
    ChimeraX-MedicalToolbar: 1.0.3
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.14.1
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.17
    ChimeraX-ModelPanel: 1.5
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.2
    ChimeraX-NMRSTAR: 1.0.2
    ChimeraX-NRRD: 1.2
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.13.5
    ChimeraX-PDB: 2.7.5
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1.1
    ChimeraX-PubChem: 2.2
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.4.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.2
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.2
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-Segmentations: 3.0.15
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.11.2
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.3
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.16.5
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.2.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.5
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.39.1
    ChimeraX-uniprot: 2.3
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.4.3
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.4
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.2
    comtypes: 1.4.1
    contourpy: 1.2.1
    cxservices: 1.2.2
    cycler: 0.12.1
    Cython: 3.0.10
    debugpy: 1.8.1
    decorator: 5.1.1
    docutils: 0.20.1
    executing: 2.0.1
    filelock: 3.13.4
    fonttools: 4.53.0
    funcparserlib: 2.0.0a0
    glfw: 2.7.0
    grako: 3.16.5
    h5py: 3.11.0
    html2text: 2024.2.26
    idna: 3.7
    ihm: 1.0
    imagecodecs: 2024.1.1
    imagesize: 1.4.1
    ipykernel: 6.29.2
    ipython: 8.21.0
    ipywidgets: 8.1.3
    jedi: 0.19.1
    jinja2: 3.1.4
    jupyter-client: 8.6.0
    jupyter-core: 5.7.2
    jupyterlab-widgets: 3.0.11
    kiwisolver: 1.4.5
    line-profiler: 4.1.2
    lxml: 5.2.1
    lz4: 4.3.3
    MarkupSafe: 2.1.5
    matplotlib: 3.8.4
    matplotlib-inline: 0.1.7
    msgpack: 1.0.8
    nest-asyncio: 1.6.0
    netCDF4: 1.6.5
    networkx: 3.3
    nibabel: 5.2.0
    nptyping: 2.5.0
    numexpr: 2.10.0
    numpy: 1.26.4
    openvr: 1.26.701
    packaging: 24.1
    ParmEd: 4.2.2
    parso: 0.8.4
    pep517: 0.13.1
    pillow: 10.3.0
    pip: 24.0
    pkginfo: 1.10.0
    platformdirs: 4.2.2
    prompt-toolkit: 3.0.47
    psutil: 5.9.8
    pure-eval: 0.2.2
    py-cpuinfo: 9.0.0
    pycollada: 0.8
    pydicom: 2.4.4
    pygments: 2.17.2
    pynmrstar: 3.3.4
    pynrrd: 1.0.0
    PyOpenGL: 3.1.7
    PyOpenGL-accelerate: 3.1.7
    pyopenxr: 1.0.3401
    pyparsing: 3.1.2
    pyproject-hooks: 1.1.0
    PyQt6-commercial: 6.6.1
    PyQt6-Qt6: 6.6.3
    PyQt6-sip: 13.6.0
    PyQt6-WebEngine-commercial: 6.6.0
    PyQt6-WebEngine-Qt6: 6.6.3
    python-dateutil: 2.9.0.post0
    pytz: 2024.1
    pywin32: 306
    pyzmq: 26.0.3
    qtconsole: 5.5.1
    QtPy: 2.4.1
    RandomWords: 0.4.0
    requests: 2.31.0
    scipy: 1.13.0
    setuptools: 69.5.1
    sfftk-rw: 0.8.1
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.5
    sphinx: 7.2.6
    sphinx-autodoc-typehints: 2.0.1
    sphinxcontrib-applehelp: 1.0.8
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.6
    sphinxcontrib-htmlhelp: 2.0.5
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.7
    sphinxcontrib-serializinghtml: 1.1.10
    stack-data: 0.6.3
    superqt: 0.6.3
    tables: 3.8.0
    tcia-utils: 1.5.1
    tifffile: 2024.1.30
    tinyarray: 1.2.4
    tornado: 6.4.1
    traitlets: 5.14.2
    typing-extensions: 4.12.2
    tzdata: 2024.1
    urllib3: 2.2.1
    wcwidth: 0.2.13
    webcolors: 1.13
    wheel: 0.43.0
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.11
    WMI: 1.5.1