Opened 7 years ago

Closed 7 years ago

Last modified 7 years ago

#1624 closed defect (nonchimerax)

Wrong ChimeraX version when installing ISOLDE 1.0b1

Reported by: loerchs@… Owned by:
Priority: normal Milestone:
Component: Third Party Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        Darwin-15.6.0-x86_64-i386-64bit
ChimeraX Version: 0.9 (2019-01-19)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 0.9 (2019-01-19)  
How to cite UCSF ChimeraX  
Downloading bundle ChimeraX_ISOLDE-1.0b1-cp36-cp36m-macosx_10_9_x86_64.whl  
Traceback (most recent call last):  
File
"/Volumes/ChimeraXInstaller/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/widgets/htmlview.py", line 384, in download_finished  
session=self.session)  
File
"/Volumes/ChimeraXInstaller/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/toolshed/__init__.py", line 605, in install_bundle  
results = self._pip_install(bundle, per_user=per_user, reinstall=reinstall)  
File
"/Volumes/ChimeraXInstaller/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/toolshed/__init__.py", line 901, in _pip_install  
results = self._run_pip(command)  
File
"/Volumes/ChimeraXInstaller/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/toolshed/__init__.py", line 928, in _run_pip  
raise RuntimeError(s)  
RuntimeError: Looking in indexes: https://pypi.org/simple,
https://cxtoolshed.rbvi.ucsf.edu/pypi/  
Processing
/Users/loerchs/Downloads/ChimeraX_ISOLDE-1.0b1-cp36-cp36m-macosx_10_9_x86_64.whl  
Collecting ChimeraX-Clipper>=0.2 (from ChimeraX-ISOLDE==1.0b1)  
Using cached
https://cxtoolshed.rbvi.ucsf.edu/media/chimeraxclipper/releases/0.2.1/ChimeraX_Clipper-0.2.1-cp36-cp36m-macosx_10_9_x86_64.whl  
Collecting ChimeraX-Core==0.6 (from ChimeraX-ISOLDE==1.0b1)  
Could not find a version that satisfies the requirement ChimeraX-Core==0.6
(from ChimeraX-ISOLDE==1.0b1) (from versions: )  
No matching distribution found for ChimeraX-Core==0.6 (from ChimeraX-
ISOLDE==1.0b1)  
  
  
RuntimeError: Looking in indexes: https://pypi.org/simple,
https://cxtoolshed.rbvi.ucsf.edu/pypi/  
Processing
/Users/loerchs/Downloads/ChimeraX_ISOLDE-1.0b1-cp36-cp36m-macosx_10_9_x86_64.whl  
Collecting ChimeraX-Clipper>=0.2 (from ChimeraX-ISOLDE==1.0b1)  
Using cached
https://cxtoolshed.rbvi.ucsf.edu/media/chimeraxclipper/releases/0.2.1/ChimeraX_Clipper-0.2.1-cp36-cp36m-macosx_10_9_x86_64.whl  
Collecting ChimeraX-Core==0.6 (from ChimeraX-ISOLDE==1.0b1)  
Could not find a version that satisfies the requirement ChimeraX-Core==0.6
(from ChimeraX-ISOLDE==1.0b1) (from versions: )  
No matching distribution found for ChimeraX-Core==0.6 (from ChimeraX-
ISOLDE==1.0b1)  
  
  
File
"/Volumes/ChimeraXInstaller/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/toolshed/__init__.py", line 928, in _run_pip  
raise RuntimeError(s)  
  
See log for complete Python traceback.  
  




OpenGL version: 4.1 INTEL-10.14.74
OpenGL renderer: Intel(R) Iris(TM) Graphics 6100
OpenGL vendor: Intel Inc.

Change History (3)

comment:1 by Tristan Croll, 7 years ago

Platform: all
Project: ChimeraX
Resolution: nonchimerax
Status: newclosed
Summary: ChimeraX bug report submissionWrong ChimeraX version when installing ISOLDE 1.0b1

ISOLDE 1.0b1 requires the ChimeraX 0.6 release. If you wait a day or three, ISOLDE 1.0b2 will be out (which will require ChimeraX 0.8 - *not* the 0.9 daily builds).

in reply to:  2 ; comment:2 by loerchs@…, 7 years ago

Hi! 
Thanks for the quick response. I had realized my mistake yesterday night. Works with 0.6 (and am looking forward tot he new version).

Have a good week!

Sarah





On 1/22/19, 9:30 AM, "ChimeraX" <ChimeraX-bugs-admin@cgl.ucsf.edu> wrote:

comment:3 by Eric Pettersen, 7 years ago

Component: UnassignedThird Party
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