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Opened 13 months ago
Closed 13 months ago
#16234 closed defect (duplicate)
Session save: No bundle information for chimerax.core.tasks.Tasks
| Reported by: | Owned by: | Zach Pearson | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Sessions | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Windows-10-10.0.22631
ChimeraX Version: 1.9.dev202406200800 (2024-06-20 08:00:12 UTC)
Description
(Describe the actions that caused this problem to occur here)
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.9.dev202406200800 (2024-06-20)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open "C:/Users/gerar/OneDrive/Escritorio/Modelado proteico/Docking
> Alphafold/CMTM6_CD40.pdb"
Summary of feedback from opening C:/Users/gerar/OneDrive/Escritorio/Modelado
proteico/Docking Alphafold/CMTM6_CD40.pdb
---
warnings | Start residue of secondary structure not found: HELIX 1 1 HIS B 19 PRO B 22 1 4
Start residue of secondary structure not found: HELIX 2 2 LEU B 40 LEU B 40 1
1
Start residue of secondary structure not found: HELIX 3 3 GLN B 42 GLN B 42 1
1
Start residue of secondary structure not found: HELIX 4 4 GLU B 56 THR B 57 1
2
Start residue of secondary structure not found: HELIX 5 5 CYS B 77 CYS B 77 1
1
36 messages similar to the above omitted
Chain information for CMTM6_CD40.pdb
---
Chain | Description
1.2/A | No description available
1.1/B | No description available
> select /B :1@N /A :104@ OG
2 atoms, 2 residues, 2 models selected
> ui tool show Distances
> distance #1.1/B:1@N #1.2/A:104@OG
Distance between CMTM6_CD40.pdb #1.1/B MET 1 N and CMTM6_CD40.pdb #1.2/A SER
104 OG: 79.195Å
> ui tool show "Selection Inspector"
> ui tool show Matchmaker
> matchmaker #1.2 to #1.1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker CMTM6_CD40.pdb, chain B (#1.1) with CMTM6_CD40.pdb, chain A (#1.2),
sequence alignment score = 36.1
RMSD between 6 pruned atom pairs is 1.446 angstroms; (across all 26 pairs:
10.890)
> matchmaker #1.2 to #1.1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker CMTM6_CD40.pdb, chain B (#1.1) with CMTM6_CD40.pdb, chain A (#1.2),
sequence alignment score = 36.1
RMSD between 6 pruned atom pairs is 1.446 angstroms; (across all 26 pairs:
10.890)
> matchmaker #1.2 to #1.1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker CMTM6_CD40.pdb, chain B (#1.1) with CMTM6_CD40.pdb, chain A (#1.2),
sequence alignment score = 36.1
RMSD between 6 pruned atom pairs is 1.446 angstroms; (across all 26 pairs:
10.890)
> matchmaker #1.2 to #1.1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker CMTM6_CD40.pdb, chain B (#1.1) with CMTM6_CD40.pdb, chain A (#1.2),
sequence alignment score = 36.1
RMSD between 6 pruned atom pairs is 1.446 angstroms; (across all 26 pairs:
10.890)
> matchmaker #1.2 to #1.1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker CMTM6_CD40.pdb, chain B (#1.1) with CMTM6_CD40.pdb, chain A (#1.2),
sequence alignment score = 36.1
RMSD between 6 pruned atom pairs is 1.446 angstroms; (across all 26 pairs:
10.890)
> matchmaker #1.1 to #1.2
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker CMTM6_CD40.pdb, chain A (#1.2) with CMTM6_CD40.pdb, chain B (#1.1),
sequence alignment score = 36.1
RMSD between 6 pruned atom pairs is 1.446 angstroms; (across all 26 pairs:
10.890)
> matchmaker #1.1 to #1.2
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker CMTM6_CD40.pdb, chain A (#1.2) with CMTM6_CD40.pdb, chain B (#1.1),
sequence alignment score = 36.1
RMSD between 6 pruned atom pairs is 1.446 angstroms; (across all 26 pairs:
10.890)
> select /B :257@N /A :6@ OG2
1 atom, 1 residue, 1 model selected
> select /B :257@N /A :6@ OG2
1 atom, 1 residue, 1 model selected
> ui tool show Distances
> style sel stick
Changed 1 atom style
> select /B :257@N /A :6@ OG2
1 atom, 1 residue, 1 model selected
> select /B :257@N /A :6@ CG2
2 atoms, 2 residues, 2 models selected
> distance #1.1/B:257@N #1.2/A:6@CG2
Distance between CMTM6_CD40.pdb #1.1/B GLY 257 N and CMTM6_CD40.pdb #1.2/A VAL
6 CG2: 1.610Å
> set bgColor white
> style sel ball
Changed 2 atom styles
> show sel atoms
> distance style color black
[Repeated 2 time(s)]
> show sel cartoons
> show sel atoms
> style sel stick
Changed 2 atom styles
> style sel stick
Changed 2 atom styles
> style sel stick
Changed 2 atom styles
> style sel ball
Changed 2 atom styles
> select #1.2/A
1436 atoms, 1467 bonds, 183 residues, 1 model selected
> show sel atoms
> select #1.1/B
2135 atoms, 2184 bonds, 277 residues, 1 model selected
> show sel atoms
> distance style radius 0.11
[Repeated 2 time(s)]
> distance style radius 0.12
[Repeated 2 time(s)]
> distance style radius 0.13
[Repeated 2 time(s)]
> distance style radius 0.14
[Repeated 2 time(s)]
> distance style radius 0.15
[Repeated 2 time(s)]
> distance style radius 0.16
[Repeated 2 time(s)]
> distance style radius 0.17
[Repeated 2 time(s)]
> distance style radius 0.18
[Repeated 2 time(s)]
> distance style radius 0.19
[Repeated 2 time(s)]
> distance style radius 0.2
[Repeated 2 time(s)]
> distance style radius 0.21
[Repeated 2 time(s)]
> distance style radius 0.22
[Repeated 2 time(s)]
> distance style radius 0.23
[Repeated 2 time(s)]
> distance style radius 0.22
[Repeated 2 time(s)]
> distance style radius 0.21
[Repeated 2 time(s)]
> select add #2
2135 atoms, 2184 bonds, 2 pseudobonds, 277 residues, 3 models selected
> distance style radius 0.22
[Repeated 2 time(s)]
> distance style radius 0.23
[Repeated 2 time(s)]
> distance style radius 0.24
[Repeated 2 time(s)]
> distance style radius 0.25
[Repeated 2 time(s)]
> save "C:/Users/gerar/OneDrive/Escritorio/Modelado proteico/Docking
> Alphafold/CMTM6_CD40 DISTANCIAS .cxs"
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\tool.py", line 165, in callback
bundle_info.run_provider(session, name, session.toolbar,
display_name=display_name)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 397, in run_provider
return api._api_caller.run_provider(api, session, name, mgr, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\toolshed\\__init__.py", line 1304, in run_provider
return cls._get_func(api, "run_provider")(session, name, mgr, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\\__init__.py", line 37, in run_provider
providers.run_provider(session, name)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\providers.py", line 56, in run_provider
what(session)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\providers.py", line 38, in _file_save
show_save_file_dialog(session)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 138, in show_save_file_dialog
_dlg.display(session, **kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 62, in display
run(session, cmd)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run
results = command.run(text, log=log, return_json=return_json)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 86, in cmd_save
Command(session, registry=registry).run(provider_cmd_text, log=log)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 101, in provider_save
saver_info.save(session, path, **provider_kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core_formats\\__init__.py", line 95, in save
return cxs_save(session, path, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
> save "C:/Users/gerar/OneDrive/Escritorio/Modelado proteico/Docking
> Alphafold/CMTM6_CD40 DISTANCIAS.cxs"
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\tool.py", line 165, in callback
bundle_info.run_provider(session, name, session.toolbar,
display_name=display_name)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 397, in run_provider
return api._api_caller.run_provider(api, session, name, mgr, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\toolshed\\__init__.py", line 1304, in run_provider
return cls._get_func(api, "run_provider")(session, name, mgr, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\\__init__.py", line 37, in run_provider
providers.run_provider(session, name)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\providers.py", line 56, in run_provider
what(session)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\providers.py", line 38, in _file_save
show_save_file_dialog(session)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 138, in show_save_file_dialog
_dlg.display(session, **kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 62, in display
run(session, cmd)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run
results = command.run(text, log=log, return_json=return_json)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 86, in cmd_save
Command(session, registry=registry).run(provider_cmd_text, log=log)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 101, in provider_save
saver_info.save(session, path, **provider_kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core_formats\\__init__.py", line 95, in save
return cxs_save(session, path, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
> select subtract #2
2135 atoms, 2184 bonds, 277 residues, 1 model selected
> save "C:/Users/gerar/OneDrive/Escritorio/Modelado proteico/Docking
> Alphafold/CMTM6CD40DISTANCIA.cxs"
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\tool.py", line 165, in callback
bundle_info.run_provider(session, name, session.toolbar,
display_name=display_name)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 397, in run_provider
return api._api_caller.run_provider(api, session, name, mgr, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\toolshed\\__init__.py", line 1304, in run_provider
return cls._get_func(api, "run_provider")(session, name, mgr, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\\__init__.py", line 37, in run_provider
providers.run_provider(session, name)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\providers.py", line 56, in run_provider
what(session)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\providers.py", line 38, in _file_save
show_save_file_dialog(session)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 138, in show_save_file_dialog
_dlg.display(session, **kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 62, in display
run(session, cmd)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run
results = command.run(text, log=log, return_json=return_json)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 86, in cmd_save
Command(session, registry=registry).run(provider_cmd_text, log=log)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 101, in provider_save
saver_info.save(session, path, **provider_kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core_formats\\__init__.py", line 95, in save
return cxs_save(session, path, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
> save "C:/Users/gerar/OneDrive/Escritorio/Modelado proteico/Docking
> Alphafold/CMTM6CD40 DIST.cxs"
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 127, in <lambda>
lambda *args, ses=session: show_save_file_dialog(ses), tool_tip="Save output
file",
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 138, in show_save_file_dialog
_dlg.display(session, **kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 62, in display
run(session, cmd)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run
results = command.run(text, log=log, return_json=return_json)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 86, in cmd_save
Command(session, registry=registry).run(provider_cmd_text, log=log)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 101, in provider_save
saver_info.save(session, path, **provider_kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core_formats\\__init__.py", line 95, in save
return cxs_save(session, path, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
> select add #1
3571 atoms, 3651 bonds, 2 pseudobonds, 460 residues, 4 models selected
> select subtract #1
Nothing selected
> save "C:/Users/gerar/OneDrive/Escritorio/Modelado proteico/Docking
> Alphafold/CMTM6CD40.cxs"
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\tool.py", line 165, in callback
bundle_info.run_provider(session, name, session.toolbar,
display_name=display_name)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 397, in run_provider
return api._api_caller.run_provider(api, session, name, mgr, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\toolshed\\__init__.py", line 1304, in run_provider
return cls._get_func(api, "run_provider")(session, name, mgr, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\\__init__.py", line 37, in run_provider
providers.run_provider(session, name)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\providers.py", line 56, in run_provider
what(session)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\toolbar\providers.py", line 38, in _file_save
show_save_file_dialog(session)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 138, in show_save_file_dialog
_dlg.display(session, **kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 62, in display
run(session, cmd)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run
results = command.run(text, log=log, return_json=return_json)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 86, in cmd_save
Command(session, registry=registry).run(provider_cmd_text, log=log)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 101, in provider_save
saver_info.save(session, path, **provider_kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core_formats\\__init__.py", line 95, in save
return cxs_save(session, path, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
> save "C:/Users/gerar/OneDrive/Escritorio/Modelado proteico/Docking
> Alphafold/N.cxs"
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 127, in <lambda>
lambda *args, ses=session: show_save_file_dialog(ses), tool_tip="Save output
file",
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 138, in show_save_file_dialog
_dlg.display(session, **kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\dialog.py", line 62, in display
run(session, cmd)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run
results = command.run(text, log=log, return_json=return_json)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 86, in cmd_save
Command(session, registry=registry).run(provider_cmd_text, log=log)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3213, in run
result = ci.function(session, **kw_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\save_command\cmd.py", line 101, in provider_save
saver_info.save(session, path, **provider_kw)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core_formats\\__init__.py", line 95, in save
return cxs_save(session, path, **kw)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 922, in save
session.save(output, version=version, include_maps=include_maps)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 646, in save
mgr.discovery(self._state_containers)
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 263, in discovery
uid = _UniqueName.from_obj(self.session, value)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
RuntimeError: No bundle information for chimerax.core.tasks.Tasks
File "C:\Program Files\ChimeraX 1.9.dev202406200800\bin\Lib\site-
packages\chimerax\core\session.py", line 143, in from_obj
raise RuntimeError('No bundle information for %s.%s' % (
See log for complete Python traceback.
OpenGL version: 3.3.0 - Build 27.20.100.8984
OpenGL renderer: Intel(R) UHD Graphics
OpenGL vendor: Intel
Python: 3.11.4
Locale: es_MX.cp1252
Qt version: PyQt6 6.6.1, Qt 6.6.1
Qt runtime version: 6.6.3
Qt platform: windows
Manufacturer: HUAWEI
Model: BOHB-WAX9
OS: Microsoft Windows 11 Education (Build 22631)
Memory: 8,415,657,984
MaxProcessMemory: 137,438,953,344
CPU: 4 Intel(R) Core(TM) i3-10110U CPU @ 2.10GHz
OSLanguage: es-MX
Installed Packages:
alabaster: 0.7.16
appdirs: 1.4.4
asttokens: 2.4.1
Babel: 2.15.0
beautifulsoup4: 4.12.3
blockdiag: 3.0.0
blosc2: 2.0.0
build: 1.2.1
certifi: 2024.6.2
cftime: 1.6.4
charset-normalizer: 3.3.2
ChimeraX-AddCharge: 1.5.17
ChimeraX-AddH: 2.2.6
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.5
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.13
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.1.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.58.2
ChimeraX-AtomicLibrary: 14.1.1
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.4.6
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.13
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.7
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.4
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.6
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.9.dev202406200800
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.3
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-DeepMutationalScan: 1.0
ChimeraX-Dicom: 1.2.4
ChimeraX-DiffPlot: 1.0
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-Label: 1.1.10
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.1.6
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.4
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.7.1
ChimeraX-MedicalToolbar: 1.0.3
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.14.1
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.17
ChimeraX-ModelPanel: 1.5
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.13.5
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.6
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.1
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.4.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.2
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.1.5
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.12.1
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.16.6
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.39.2
ChimeraX-uniprot: 2.3.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.4.3
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.4
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.2
comtypes: 1.4.1
contourpy: 1.2.1
cxservices: 1.2.2
cycler: 0.12.1
Cython: 3.0.10
debugpy: 1.8.1
decorator: 5.1.1
docutils: 0.20.1
executing: 2.0.1
filelock: 3.13.4
fonttools: 4.53.0
funcparserlib: 2.0.0a0
glfw: 2.7.0
grako: 3.16.5
h5py: 3.11.0
html2text: 2024.2.26
idna: 3.7
ihm: 1.0
imagecodecs: 2024.1.1
imagesize: 1.4.1
ipykernel: 6.29.2
ipython: 8.21.0
ipywidgets: 8.1.3
jedi: 0.19.1
Jinja2: 3.1.4
jupyter_client: 8.6.0
jupyter_core: 5.7.2
jupyterlab_widgets: 3.0.11
kiwisolver: 1.4.5
line-profiler: 4.1.2
lxml: 5.2.1
lz4: 4.3.3
MarkupSafe: 2.1.5
matplotlib: 3.8.4
matplotlib-inline: 0.1.7
msgpack: 1.0.8
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.10.0
numpy: 1.26.4
openvr: 1.26.701
packaging: 24.1
ParmEd: 4.2.2
parso: 0.8.4
pep517: 0.13.1
pillow: 10.3.0
pip: 24.0
pkginfo: 1.10.0
platformdirs: 4.2.2
prompt_toolkit: 3.0.47
psutil: 5.9.8
pure-eval: 0.2.2
py-cpuinfo: 9.0.0
pycollada: 0.8
pydicom: 2.4.4
Pygments: 2.17.2
pynmrstar: 3.3.4
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.3401
pyparsing: 3.1.2
pyproject_hooks: 1.1.0
PyQt6-commercial: 6.6.1
PyQt6-Qt6: 6.6.3
PyQt6-sip: 13.6.0
PyQt6-WebEngine-commercial: 6.6.0
PyQt6-WebEngine-Qt6: 6.6.3
python-dateutil: 2.9.0.post0
pytz: 2024.1
pywin32: 306
pyzmq: 26.0.3
qtconsole: 5.5.1
QtPy: 2.4.1
RandomWords: 0.4.0
requests: 2.32.0
scipy: 1.13.0
setuptools: 69.5.1
sfftk-rw: 0.8.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.5
Sphinx: 7.2.6
sphinx-autodoc-typehints: 2.0.1
sphinxcontrib-applehelp: 1.0.8
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.6
sphinxcontrib-htmlhelp: 2.0.5
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.7
sphinxcontrib-serializinghtml: 1.1.10
stack-data: 0.6.3
superqt: 0.6.3
tables: 3.8.0
tcia_utils: 1.5.1
tifffile: 2024.1.30
tinyarray: 1.2.4
tornado: 6.4.1
traitlets: 5.14.2
typing_extensions: 4.12.2
tzdata: 2024.1
urllib3: 2.2.2
wcwidth: 0.2.13
webcolors: 1.13
wheel: 0.43.0
wheel-filename: 1.4.1
widgetsnbextension: 4.0.11
WMI: 1.5.1
Change History (2)
comment:1 by , 13 months ago
| Component: | Unassigned → Sessions |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Session save: No bundle information for chimerax.core.tasks.Tasks |
comment:2 by , 13 months ago
| Resolution: | → duplicate |
|---|---|
| Status: | assigned → closed |
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