Opened 7 years ago

Closed 7 years ago

#1616 closed defect (fixed)

Session restore: msgpack: max_ext_len exceeded

Reported by: gghanim@… Owned by: Greg Couch
Priority: major Milestone: 0.9
Component: Sessions Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        Darwin-18.2.0-x86_64-i386-64bit
ChimeraX Version: 0.9 (2019-01-16)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 0.9 (2019-01-16)  
How to cite UCSF ChimeraX  

> open "/Users/george/Desktop/Figures/main figures/figure
3/ChimeraX/figure3_donorDNA.cxs"

Unable to restore session, resetting.  
  
Traceback (most recent call last):  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/session.py", line 573, in restore  
data = fdeserialize(stream)  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/serialize.py", line 193, in msgpack_deserialize  
return next(stream)  
File "msgpack/_unpacker.pyx", line 533, in msgpack._cmsgpack.Unpacker.__next__  
File "msgpack/_unpacker.pyx", line 464, in msgpack._cmsgpack.Unpacker._unpack  
ValueError: 1932105 exceeds max_ext_len(1048576)  
  
opened ChimeraX session  

> open "/Users/george/Documents/Graduate Program/Thesis
Lab/Presentations/19.01.06-BBS Retreat/ChimeraX Models/TNP5.cxs"

Unable to restore session, resetting.  
  
Traceback (most recent call last):  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/session.py", line 573, in restore  
data = fdeserialize(stream)  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/serialize.py", line 193, in msgpack_deserialize  
return next(stream)  
File "msgpack/_unpacker.pyx", line 533, in msgpack._cmsgpack.Unpacker.__next__  
File "msgpack/_unpacker.pyx", line 464, in msgpack._cmsgpack.Unpacker._unpack  
ValueError: 1923556 exceeds max_ext_len(1048576)  
  
opened ChimeraX session  




OpenGL version: 4.1 NVIDIA-12.0.21 355.11.10.50.10.103
OpenGL renderer: NVIDIA GeForce GT 750M OpenGL Engine
OpenGL vendor: NVIDIA Corporation

Change History (5)

comment:1 by pett, 7 years ago

Component: UnassignedSessions
Milestone: 0.9
Owner: set to Greg Couch
Platform: all
Priority: normalmajor
Project: ChimeraX
Status: newassigned
Summary: ChimeraX bug report submissionSession restore: msgpack: max_ext_len exceeded

Reported by George Ghanim

comment:2 by Greg Couch, 7 years ago

Hello, can you send me the session file that doesn't work? If you'd like to keep the session private, please email it directly to me at gregc@…. Thanks. -- Greg

comment:3 by Greg Couch, 7 years ago

Status: assignedfeedback

Actually, I might have fixed it. Please test your session with the next daily build and let me know. The build will be dated 2019-01-17 or newer.

-- Greg

in reply to:  4 ; comment:4 by gghanim@…, 7 years ago

      
  
  
Got it, thank you.   
  
  
  

  
  

  
  

comment:5 by Greg Couch, 7 years ago

Resolution: fixed
Status: feedbackclosed

Fixed!

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