![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 13 months ago
Closed 13 months ago
#16071 closed defect (duplicate)
Crash on Mac waking from sleep
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-15.1-x86_64-i386-64bit
ChimeraX Version: 1.8 (2024-06-10 23:15:52 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x0000000201cf2f80 (most recent call first):
File "/Applications/ChimeraX-1.8.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 315 in event_loop
File "/Applications/ChimeraX-1.8.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1003 in init
File "/Applications/ChimeraX-1.8.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1166 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtNetwork, PyQt6.QtPrintSupport, PyQt6.QtWebChannel, PyQt6.QtWebEngineCore, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, openmm._openmm, openmm.app.internal.compiled, chimerax.map._map, charset_normalizer.md, PIL._imaging, matplotlib._c_internal_utils, matplotlib._path, kiwisolver._cext, matplotlib._image, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.surface._surface, chimerax.pdb_lib._load_libs, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, lz4._version, lz4.frame._frame, msgpack._cmsgpack, chimerax.core._serialize, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets, chimerax.atomic._ribbons, chimerax.graphics._graphics, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif, chimerax.pdb._pdbio, psutil._psutil_osx, psutil._psutil_posix, lxml._elementpath, lxml.etree, PIL._imagingmath (total: 63)
{"app_name":"ChimeraX","timestamp":"2024-10-04 12:33:37.00 -0500","app_version":"1.8.0","slice_uuid":"17982d98-65bc-3327-8526-577ec996453c","build_version":"1.8.0.0","platform":1,"bundleID":"edu.ucsf.cgl.ChimeraX","share_with_app_devs":0,"is_first_party":0,"bug_type":"309","os_version":"macOS 15.1 (24B5046f)","roots_installed":0,"name":"ChimeraX","incident_id":"E4746D4A-D92E-43DC-B3E5-D14D45C1337F"}
{
"uptime" : 390000,
"procRole" : "Background",
"version" : 2,
"userID" : 502,
"deployVersion" : 210,
"modelCode" : "Mac14,2",
"coalitionID" : 8134,
"osVersion" : {
"train" : "macOS 15.1",
"build" : "24B5046f",
"releaseType" : "User"
},
"captureTime" : "2024-10-04 12:33:16.9539 -0500",
"codeSigningMonitor" : 1,
"incident" : "E4746D4A-D92E-43DC-B3E5-D14D45C1337F",
"pid" : 83897,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2024-10-02 13:49:51.0896 -0500",
"procStartAbsTime" : 8122929157812,
"procExitAbsTime" : 9364153872071,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.8.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.8.0","CFBundleVersion":"1.8.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"C44202AD-D429-59CA-B33F-B189C691864E","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "AADF84B1-33B7-C265-D40B-A6CDDBB3E6E4",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 4294967295,
"instructionByteStream" : {"beforePC":"fyMD1f17v6n9AwCRcuD\/l78DAJH9e8Go\/w9f1sADX9YQKYDSARAA1A==","atPC":"AwEAVH8jA9X9e7+p\/QMAkWfg\/5e\/AwCR\/XvBqP8PX9bAA1\/WcAqA0g=="},
"bootSessionUUID" : "5EED52BD-EFD4-4905-8CA7-68BF6E74CED0",
"wakeTime" : 43,
"sleepWakeUUID" : "3D9EB71E-C38C-46CC-A030-AB8098587CA4",
"sip" : "enabled",
"vmRegionInfo" : "0x7e6c39678798 is not in any region. Bytes after previous region: 33449094645657 \n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n MALLOC_NANO 600020000000-600040000000 [512.0M] rw-\/rwx SM=PRV \n---> \n UNUSED SPACE AT END",
"exception" : {"codes":"0x0000000000000001, 0x0000fe6c39678798","rawCodes":[1,279740773009304],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000fe6c39678798 -> 0x00007e6c39678798 (possible pointer authentication failure)"},
"termination" : {"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault: 11","byProc":"ChimeraX","byPid":83897},
"vmregioninfo" : "0x7e6c39678798 is not in any region. Bytes after previous region: 33449094645657 \n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n MALLOC_NANO 600020000000-600040000000 [512.0M] rw-\/rwx SM=PRV \n---> \n UNUSED SPACE AT END",
"extMods" : {"caller":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"system":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"targeted":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"warnings":0},
"faultingThread" : 0,
"threads" : [{"threadState":{"x":[{"value":0},{"value":0},{"value":1},{"value":4832721560},{"value":80},{"value":112},{"value":96},{"value":0},{"value":13278134935904206186},{"value":13278134927335428842},{"value":14757395258967641293},{"value":4294967286},{"value":4832721490},{"value":0},{"value":54},{"value":4294967280},{"value":328},{"value":8756263216},{"value":0},{"value":11},{"value":259},{"value":8620290144,"symbolLocation":224,"symbol":"_main_thread"},{"value":0},{"value":1},{"value":4363093552,"symbolLocation":0,"symbol":"faulthandler_handlers"},{"value":8586727424,"symbolLocation":0,"symbol":"OBJC_IVAR_$_NSTextView._contentSize"},{"value":8586727424,"symbolLocation":0,"symbol":"OBJC_IVAR_$_NSTextView._contentSize"},{"value":5},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927380336},"cpsr":{"value":1073745920},"fp":{"value":4832721632},"sp":{"value":4832721600},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927148544,"matchesCrashFrame":1},"far":{"value":0}},"id":4959331,"triggered":true,"name":"CrBrowserMain","queue":"com.apple.main-thread","frames":[{"imageOffset":38400,"symbol":"__pthread_kill","symbolLocation":8,"imageIndex":184},{"imageOffset":28528,"symbol":"pthread_kill","symbolLocation":288,"imageIndex":185},{"imageOffset":269336,"symbol":"raise","symbolLocation":32,"imageIndex":186},{"imageOffset":2417160,"symbol":"faulthandler_fatal_error","symbolLocation":392,"imageIndex":1},{"imageOffset":16772,"symbol":"_sigtramp","symbolLocation":56,"imageIndex":187},{"imageOffset":343184,"imageIndex":69},{"imageOffset":343184,"imageIndex":69},{"imageOffset":383604,"symbol":"_NSViewHierarchyDidChangeBackingProperties","symbolLocation":244,"imageIndex":188},{"imageOffset":11518880,"symbol":"-[NSWindow _postWindowDidChangeBackingPropertiesAndDisplayWindowForPreviousBackingScaleFactor:previousColorSpace:]","symbolLocation":192,"imageIndex":188},{"imageOffset":2079392,"symbol":"__67-[NSWindow _updateSettingsSendingScreenChangeNotificationToScreen:]_block_invoke","symbolLocation":448,"imageIndex":188},{"imageOffset":510580,"symbol":"NSPerformVisuallyAtomicChange","symbolLocation":108,"imageIndex":188},{"imageOffset":2078932,"symbol":"-[NSWindow _updateSettingsSendingScreenChangeNotificationToScreen:]","symbolLocation":96,"imageIndex":188},{"imageOffset":516028,"symbol":"-[NSWindow _setFrameCommon:display:fromServer:]","symbolLocation":2012,"imageIndex":188},{"imageOffset":11489224,"symbol":"-[NSWindow(NSScreenLayout) _setFrame:fromAdjustmentToScreen:anchorIfNeeded:animate:]","symbolLocation":628,"imageIndex":188},{"imageOffset":3244992,"symbol":"-[NSWindow _adjustWindowToScreen]","symbolLocation":1108,"imageIndex":188},{"imageOffset":3374132,"symbol":"-[NSWindow _displayChangedSoAdjustWindows:]","symbolLocation":100,"imageIndex":188},{"imageOffset":14951380,"symbol":"___NSApplicationPerformScreenInvalidationReactions_block_invoke","symbolLocation":80,"imageIndex":188},{"imageOffset":220048,"symbol":"-[NSApplication enumerateWindowsWithOptions:usingBlock:]","symbolLocation":236,"imageIndex":188},{"imageOffset":14949588,"symbol":"___NSApplicationReactToScreenInvalidation_block_invoke","symbolLocation":1012,"imageIndex":188},{"imageOffset":14947604,"symbol":"_NSApplicationReactToScreenInvalidation","symbolLocation":308,"imageIndex":188},{"imageOffset":14948192,"symbol":"-[NSApplication(ScreenHandling) _reactToDisplayChanges:]","symbolLocation":416,"imageIndex":188},{"imageOffset":9464716,"symbol":"_NSCGSDisplayConfigurationUpdateAndInvokeObservers","symbolLocation":436,"imageIndex":188},{"imageOffset":9465972,"symbol":"_NSCGSDisplayConfigurationDidReconfigureNotificationHandler","symbolLocation":316,"imageIndex":188},{"imageOffset":48708,"symbol":"(anonymous namespace)::notify_datagram_handler(unsigned int, CGSDatagramType, void*, unsigned long, void*)","symbolLocation":932,"imageIndex":189},{"imageOffset":4246376,"symbol":"CGSDatagramReadStream::dispatchMainQueueDatagrams()","symbolLocation":228,"imageIndex":189},{"imageOffset":4246116,"symbol":"invocation function for block in CGSDatagramReadStream::mainQueueWakeup()","symbolLocation":28,"imageIndex":189},{"imageOffset":10488,"symbol":"_dispatch_call_block_and_release","symbolLocation":32,"imageIndex":190},{"imageOffset":18008,"symbol":"_dispatch_client_callout","symbolLocation":20,"imageIndex":190},{"imageOffset":77672,"symbol":"_dispatch_main_queue_drain","symbolLocation":980,"imageIndex":190},{"imageOffset":76676,"symbol":"_dispatch_main_queue_callback_4CF","symbolLocation":44,"imageIndex":190},{"imageOffset":773044,"symbol":"__CFRUNLOOP_IS_SERVICING_THE_MAIN_DISPATCH_QUEUE__","symbolLocation":16,"imageIndex":191},{"imageOffset":510256,"symbol":"__CFRunLoopRun","symbolLocation":1996,"imageIndex":191},{"imageOffset":506600,"symbol":"CFRunLoopRunSpecific","symbolLocation":572,"imageIndex":191},{"imageOffset":1097572,"symbol":"RunCurrentEventLoopInMode","symbolLocation":292,"imageIndex":192},{"imageOffset":1121620,"symbol":"ReceiveNextEventCommon","symbolLocation":636,"imageIndex":192},{"imageOffset":1121976,"symbol":"_BlockUntilNextEventMatchingListInModeWithFilter","symbolLocation":76,"imageIndex":192},{"imageOffset":241196,"symbol":"_DPSNextEvent","symbolLocation":660,"imageIndex":188},{"imageOffset":9915948,"symbol":"-[NSApplication(NSEventRouting) _nextEventMatchingEventMask:untilDate:inMode:dequeue:]","symbolLocation":688,"imageIndex":188},{"imageOffset":188032,"symbol":"-[NSApplication run]","symbolLocation":480,"imageIndex":188},{"imageOffset":81772,"imageIndex":69},{"imageOffset":573772,"symbol":"QEventLoop::exec(QFlags)","symbolLocation":540,"imageIndex":45},{"imageOffset":535260,"symbol":"QCoreApplication::exec()","symbolLocation":112,"imageIndex":45},{"imageOffset":2507676,"symbol":"meth_QApplication_exec(_object*, _object*)","symbolLocation":96,"imageIndex":48},{"imageOffset":1004504,"symbol":"cfunction_call","symbolLocation":96,"imageIndex":1},{"imageOffset":594156,"symbol":"_PyObject_MakeTpCall","symbolLocation":128,"imageIndex":1},{"imageOffset":1789244,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":54984,"imageIndex":1},{"imageOffset":1729512,"symbol":"PyEval_EvalCode","symbolLocation":276,"imageIndex":1},{"imageOffset":1707120,"symbol":"builtin_exec","symbolLocation":428,"imageIndex":1},{"imageOffset":1007044,"symbol":"cfunction_vectorcall_FASTCALL_KEYWORDS","symbolLocation":80,"imageIndex":1},{"imageOffset":1788292,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":54032,"imageIndex":1},{"imageOffset":1811404,"symbol":"_PyEval_Vector","symbolLocation":156,"imageIndex":1},{"imageOffset":2389028,"symbol":"pymain_run_module","symbolLocation":256,"imageIndex":1},{"imageOffset":2387652,"symbol":"Py_RunMain","symbolLocation":1784,"imageIndex":1},{"imageOffset":2392180,"symbol":"pymain_main","symbolLocation":52,"imageIndex":1},{"imageOffset":2392116,"symbol":"Py_Main","symbolLocation":36,"imageIndex":1},{"imageOffset":15700,"symbol":"main","symbolLocation":128,"imageIndex":0},{"imageOffset":25204,"symbol":"start","symbolLocation":2840,"imageIndex":193}]},{"id":4959469,"name":"ThreadPoolServiceThread","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553132126592},{"value":4},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":3},{"value":6597069768194},{"value":6047156896},{"value":64003},{"value":1},{"value":1},{"value":369},{"value":6138277888},{"value":0},{"value":5659966136},{"value":4996127008},{"value":0},{"value":6138277200},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":5940500920},"cpsr":{"value":2684358656},"fp":{"value":6138277184},"sp":{"value":6138277120},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927162332},"far":{"value":0}},"frames":[{"imageOffset":52188,"symbol":"kevent64","symbolLocation":8,"imageIndex":184},{"imageOffset":66705848,"imageIndex":56},{"imageOffset":66705328,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":66384288,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959470,"name":"ThreadPoolForegroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869442},{"value":0},{"value":192427419762688},{"value":0},{"value":192427419762688},{"value":32},{"value":33000},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":44803},{"value":4106491955},{"value":4104392911},{"value":18446744073709551569},{"value":51},{"value":0},{"value":33000},{"value":32},{"value":192427419762688},{"value":0},{"value":192427419762688},{"value":6146698512},{"value":0},{"value":17179870466},{"value":17179869442},{"value":1282}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6146697856},"sp":{"value":6146697776},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66429892,"imageIndex":56},{"imageOffset":66433464,"imageIndex":56},{"imageOffset":66432016,"imageIndex":56},{"imageOffset":66431744,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959471,"name":"ThreadPoolBackgroundWorker","threadState":{"x":[{"value":268451845},{"value":17179869442},{"value":0},{"value":194626443018240},{"value":0},{"value":194626443018240},{"value":32},{"value":33000},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":45315},{"value":3720747113},{"value":3718647835},{"value":18446744073709551569},{"value":105},{"value":0},{"value":33000},{"value":32},{"value":194626443018240},{"value":0},{"value":194626443018240},{"value":6155119888},{"value":0},{"value":17179870466},{"value":17179869442},{"value":1282}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6155119232},"sp":{"value":6155119152},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66429892,"imageIndex":56},{"imageOffset":66433464,"imageIndex":56},{"imageOffset":66431884,"imageIndex":56},{"imageOffset":66431792,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959472,"name":"Chrome_IOThread","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553132537536},{"value":3},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":9223372036854775809},{"value":6047156944},{"value":46339},{"value":1},{"value":1},{"value":369},{"value":6163542016},{"value":0},{"value":5659958232},{"value":5680630880},{"value":0},{"value":6163541312},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":5940500920},"cpsr":{"value":1610616832},"fp":{"value":6163541296},"sp":{"value":6163541232},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927162332},"far":{"value":0}},"frames":[{"imageOffset":52188,"symbol":"kevent64","symbolLocation":8,"imageIndex":184},{"imageOffset":66705848,"imageIndex":56},{"imageOffset":66705328,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":42148336,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959473,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":204522047668224},{"value":0},{"value":204522047668224},{"value":32},{"value":0},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":47619},{"value":1},{"value":1},{"value":18446744073709551569},{"value":6171963392},{"value":0},{"value":0},{"value":32},{"value":204522047668224},{"value":0},{"value":204522047668224},{"value":6171962448},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6171961792},"sp":{"value":6171961712},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66197084,"imageIndex":56},{"imageOffset":65870644,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959477,"name":"Chrome_InProcGpuThread","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":218815698829312},{"value":0},{"value":218815698829312},{"value":32},{"value":0},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":50947},{"value":1},{"value":1},{"value":18446744073709551569},{"value":6205648896},{"value":0},{"value":0},{"value":32},{"value":218815698829312},{"value":0},{"value":218815698829312},{"value":6205647952},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6205647296},"sp":{"value":6205647216},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66197084,"imageIndex":56},{"imageOffset":65870644,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959478,"name":"Chrome_ChildIOThread","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553171055648},{"value":1},{"value":0},{"value":0},{"value":6214068268},{"value":0},{"value":0},{"value":1},{"value":6597069768194},{"value":6047157040},{"value":58883},{"value":1},{"value":1},{"value":369},{"value":6214070272},{"value":0},{"value":5659976152},{"value":4791274560},{"value":0},{"value":6214069568},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":5940500920},"cpsr":{"value":2684358656},"fp":{"value":6214069552},"sp":{"value":6214069488},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927162332},"far":{"value":0}},"frames":[{"imageOffset":52188,"symbol":"kevent64","symbolLocation":8,"imageIndex":184},{"imageOffset":66705848,"imageIndex":56},{"imageOffset":66705328,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":107949588,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959479,"name":"CompositorTileWorker1","threadState":{"x":[{"value":260},{"value":0},{"value":512},{"value":0},{"value":0},{"value":161},{"value":0},{"value":0},{"value":6222491224},{"value":0},{"value":0},{"value":2},{"value":2},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8756263144},{"value":0},{"value":4791376120},{"value":4791376248},{"value":6222491872},{"value":0},{"value":0},{"value":512},{"value":513},{"value":768},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":6222491344},"sp":{"value":6222491200},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}},"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":66586532,"imageIndex":56},{"imageOffset":99447652,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959480,"name":"ThreadPoolSingleThreadSharedForeground0","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":247403001151488},{"value":0},{"value":247403001151488},{"value":32},{"value":0},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":57603},{"value":2212931712},{"value":2210834427},{"value":18446744073709551569},{"value":128},{"value":0},{"value":0},{"value":32},{"value":247403001151488},{"value":0},{"value":247403001151488},{"value":6230912272},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6230911616},"sp":{"value":6230911536},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66429892,"imageIndex":56},{"imageOffset":66432404,"imageIndex":56},{"imageOffset":66432060,"imageIndex":56},{"imageOffset":66431816,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959483,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":229810815107072},{"value":0},{"value":229810815107072},{"value":32},{"value":0},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":53507},{"value":1},{"value":1},{"value":18446744073709551569},{"value":6239334400},{"value":0},{"value":0},{"value":32},{"value":229810815107072},{"value":0},{"value":229810815107072},{"value":6239333456},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6239332800},"sp":{"value":6239332720},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66197084,"imageIndex":56},{"imageOffset":65870644,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959484,"name":"VizCompositorThread","threadState":{"x":[{"value":268451845},{"value":17179869442},{"value":0},{"value":235308373245952},{"value":0},{"value":235308373245952},{"value":32},{"value":13},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":54787},{"value":1},{"value":1},{"value":18446744073709551569},{"value":6247755776},{"value":0},{"value":13},{"value":32},{"value":235308373245952},{"value":0},{"value":235308373245952},{"value":6247754848},{"value":0},{"value":17179870466},{"value":17179869442},{"value":1282}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6247754192},"sp":{"value":6247754112},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":65870544,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959487,"name":"NetworkService","threadState":{"x":[{"value":4},{"value":0},{"value":0},{"value":105553148158592},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":2},{"value":6597069768194},{"value":6047157232},{"value":65795},{"value":1},{"value":1},{"value":369},{"value":6256177152},{"value":0},{"value":5710562248},{"value":5701204384},{"value":0},{"value":6256176496},{"value":12297829382473034411},{"value":1},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":5940500920},"cpsr":{"value":2684358656},"fp":{"value":6256176480},"sp":{"value":6256176416},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927162332},"far":{"value":0}},"frames":[{"imageOffset":52188,"symbol":"kevent64","symbolLocation":8,"imageIndex":184},{"imageOffset":66705848,"imageIndex":56},{"imageOffset":66705328,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959488,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":285885908123648},{"value":0},{"value":285885908123648},{"value":32},{"value":0},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":66563},{"value":1},{"value":1},{"value":18446744073709551569},{"value":6264598528},{"value":0},{"value":0},{"value":32},{"value":285885908123648},{"value":0},{"value":285885908123648},{"value":6264597584},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6264596928},"sp":{"value":6264596848},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66197084,"imageIndex":56},{"imageOffset":65870644,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959490,"name":"ThreadPoolSingleThreadForegroundBlocking1","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":366150256951296},{"value":0},{"value":366150256951296},{"value":32},{"value":0},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":85251},{"value":72057602658351209,"symbolLocation":72057594037927937,"symbol":"OBJC_CLASS_$_NSAutoreleasePool"},{"value":8620423272,"symbolLocation":0,"symbol":"OBJC_CLASS_$_NSAutoreleasePool"},{"value":18446744073709551569},{"value":8756891288},{"value":0},{"value":0},{"value":32},{"value":366150256951296},{"value":0},{"value":366150256951296},{"value":6273019152},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6273018496},"sp":{"value":6273018416},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66429892,"imageIndex":56},{"imageOffset":66433464,"imageIndex":56},{"imageOffset":66432104,"imageIndex":56},{"imageOffset":66431804,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959510,"name":"NetworkConfigWatcher","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":343060512768000},{"value":0},{"value":343060512768000},{"value":32},{"value":0},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":79875},{"value":1},{"value":1},{"value":18446744073709551569},{"value":6284308480},{"value":0},{"value":0},{"value":32},{"value":343060512768000},{"value":0},{"value":343060512768000},{"value":6284307536},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6284306880},"sp":{"value":6284306800},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66197084,"imageIndex":56},{"imageOffset":65870644,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959544,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":260},{"value":0},{"value":84736},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":6126284488},{"value":0},{"value":0},{"value":2},{"value":2},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8756263144},{"value":0},{"value":4492369936,"symbolLocation":16,"symbol":"thread_status"},{"value":4492370000,"symbolLocation":80,"symbol":"thread_status"},{"value":6126285024},{"value":0},{"value":0},{"value":84736},{"value":84737},{"value":84992},{"value":4492283904,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":6126284608},"sp":{"value":6126284464},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959545,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":260},{"value":0},{"value":84480},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13077720776},{"value":0},{"value":0},{"value":2},{"value":2},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8756263144},{"value":0},{"value":4492370064,"symbolLocation":144,"symbol":"thread_status"},{"value":4492370128,"symbolLocation":208,"symbol":"thread_status"},{"value":13077721312},{"value":0},{"value":0},{"value":84480},{"value":84481},{"value":84736},{"value":4492283904,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13077720896},"sp":{"value":13077720752},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959546,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13113536200},{"value":0},{"value":0},{"value":2},{"value":2},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8756263144},{"value":0},{"value":4492370192,"symbolLocation":272,"symbol":"thread_status"},{"value":4492370256,"symbolLocation":336,"symbol":"thread_status"},{"value":13113536736},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4492283904,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13113536320},"sp":{"value":13113536176},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959547,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13114109640},{"value":0},{"value":0},{"value":2},{"value":2},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8756263144},{"value":0},{"value":4492370320,"symbolLocation":400,"symbol":"thread_status"},{"value":4492370384,"symbolLocation":464,"symbol":"thread_status"},{"value":13114110176},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4492283904,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13114109760},"sp":{"value":13114109616},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959548,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13114683080},{"value":0},{"value":0},{"value":2},{"value":2},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8756263144},{"value":0},{"value":4492370448,"symbolLocation":528,"symbol":"thread_status"},{"value":4492370512,"symbolLocation":592,"symbol":"thread_status"},{"value":13114683616},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4492283904,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13114683200},"sp":{"value":13114683056},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959549,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13115256520},{"value":0},{"value":0},{"value":2},{"value":2},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8756263144},{"value":0},{"value":4492370576,"symbolLocation":656,"symbol":"thread_status"},{"value":4492370640,"symbolLocation":720,"symbol":"thread_status"},{"value":13115257056},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4492283904,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13115256640},"sp":{"value":13115256496},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959550,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13117468360},{"value":0},{"value":0},{"value":2},{"value":2},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8756263144},{"value":0},{"value":4492370704,"symbolLocation":784,"symbol":"thread_status"},{"value":4492370768,"symbolLocation":848,"symbol":"thread_status"},{"value":13117468896},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4492283904,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13117468480},"sp":{"value":13117468336},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959552,"name":"com.apple.NSEventThread","threadState":{"x":[{"value":268451845},{"value":21592279046},{"value":8589934592,"symbolLocation":80,"symbol":"metadata instantiation cache for protocol conformance descriptor for ImmediateScheduler.SchedulerTimeType.Stride"},{"value":411230233690112},{"value":0},{"value":411230233690112},{"value":2},{"value":4294967295},{"value":18446744073709550527},{"value":2},{"value":0},{"value":0},{"value":0},{"value":95747},{"value":256},{"value":0},{"value":18446744073709551569},{"value":8756245656},{"value":0},{"value":4294967295},{"value":2},{"value":411230233690112},{"value":0},{"value":411230233690112},{"value":13118627944},{"value":8589934592,"symbolLocation":80,"symbol":"metadata instantiation cache for protocol conformance descriptor for ImmediateScheduler.SchedulerTimeType.Stride"},{"value":21592279046},{"value":21592279046},{"value":4412409862}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":13118627792},"sp":{"value":13118627712},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":515440,"symbol":"__CFRunLoopServiceMachPort","symbolLocation":160,"imageIndex":191},{"imageOffset":509472,"symbol":"__CFRunLoopRun","symbolLocation":1212,"imageIndex":191},{"imageOffset":506600,"symbol":"CFRunLoopRunSpecific","symbolLocation":572,"imageIndex":191},{"imageOffset":1441360,"symbol":"_NSEventThread","symbolLocation":148,"imageIndex":188},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959553,"name":"MemoryInfra","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":524479931351040},{"value":0},{"value":524479931351040},{"value":32},{"value":0},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":122115},{"value":1},{"value":1},{"value":18446744073709551569},{"value":6407401472},{"value":0},{"value":0},{"value":32},{"value":524479931351040},{"value":0},{"value":524479931351040},{"value":6407400528},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6407399872},"sp":{"value":6407399792},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66197084,"imageIndex":56},{"imageOffset":65870644,"imageIndex":56},{"imageOffset":66336288,"imageIndex":56},{"imageOffset":66064512,"imageIndex":56},{"imageOffset":66483648,"imageIndex":56},{"imageOffset":66484032,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959554,"name":"ThreadPoolSingleThreadSharedBackgroundBlocking2","threadState":{"x":[{"value":268451845},{"value":17179869186},{"value":0},{"value":526678954606592},{"value":0},{"value":526678954606592},{"value":32},{"value":0},{"value":18446744073709550527},{"value":32},{"value":0},{"value":0},{"value":0},{"value":122627},{"value":3578401034},{"value":3576301833},{"value":18446744073709551569},{"value":266},{"value":0},{"value":0},{"value":32},{"value":526678954606592},{"value":0},{"value":526678954606592},{"value":6415822096},{"value":0},{"value":17179869186},{"value":17179869186},{"value":2}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927189456},"cpsr":{"value":4096},"fp":{"value":6415821440},"sp":{"value":6415821360},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927113780},"far":{"value":0}},"frames":[{"imageOffset":3636,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":184},{"imageOffset":79312,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":184},{"imageOffset":39384,"symbol":"mach_msg_overwrite","symbolLocation":480,"imageIndex":184},{"imageOffset":4476,"symbol":"mach_msg","symbolLocation":24,"imageIndex":184},{"imageOffset":66741424,"imageIndex":56},{"imageOffset":66197236,"imageIndex":56},{"imageOffset":66429892,"imageIndex":56},{"imageOffset":66432404,"imageIndex":56},{"imageOffset":66431928,"imageIndex":56},{"imageOffset":66431840,"imageIndex":56},{"imageOffset":66589352,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}]},{"id":4959653,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":136568,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":28,"imageIndex":195},{"imageOffset":95156600,"imageIndex":56},{"imageOffset":95160968,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":4},{"value":0},{"value":10496},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13127675560},{"value":0},{"value":1792},{"value":7696581396226},{"value":7696581396226},{"value":1792},{"value":0},{"value":7696581396224},{"value":305},{"value":8756263144},{"value":0},{"value":105553121529616},{"value":105553121529680},{"value":13127676128},{"value":0},{"value":0},{"value":10496},{"value":10496},{"value":12544},{"value":18446744073709551615},{"value":105553195184504}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13127675680},"sp":{"value":13127675536},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959654,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":136568,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":28,"imageIndex":195},{"imageOffset":95156600,"imageIndex":56},{"imageOffset":95160968,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":4},{"value":0},{"value":8704},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13167898280},{"value":0},{"value":1792},{"value":7696581396226},{"value":7696581396226},{"value":1792},{"value":0},{"value":7696581396224},{"value":305},{"value":8756263144},{"value":0},{"value":105553121529616},{"value":105553121529680},{"value":13167898848},{"value":0},{"value":0},{"value":8704},{"value":8704},{"value":10752},{"value":18446744073709551615},{"value":105553195644536}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13167898400},"sp":{"value":13167898256},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959655,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":136568,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":28,"imageIndex":195},{"imageOffset":95156600,"imageIndex":56},{"imageOffset":95160968,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":4},{"value":0},{"value":8960},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13168471720},{"value":0},{"value":1792},{"value":7696581396226},{"value":7696581396226},{"value":1792},{"value":0},{"value":7696581396224},{"value":305},{"value":8756263144},{"value":0},{"value":105553121529616},{"value":105553121529680},{"value":13168472288},{"value":0},{"value":0},{"value":8960},{"value":8960},{"value":11008},{"value":18446744073709551615},{"value":105553195487160}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13168471840},"sp":{"value":13168471696},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959656,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":136568,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":28,"imageIndex":195},{"imageOffset":95156600,"imageIndex":56},{"imageOffset":95160968,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":4},{"value":0},{"value":9216},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13169045160},{"value":0},{"value":1792},{"value":7696581396226},{"value":7696581396226},{"value":1792},{"value":0},{"value":7696581396224},{"value":305},{"value":8756263144},{"value":0},{"value":105553121529616},{"value":105553121529680},{"value":13169045728},{"value":0},{"value":0},{"value":9216},{"value":9216},{"value":11264},{"value":18446744073709551615},{"value":105553196389400}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13169045280},"sp":{"value":13169045136},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959657,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":136568,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":28,"imageIndex":195},{"imageOffset":95156600,"imageIndex":56},{"imageOffset":95160968,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":4},{"value":0},{"value":9472},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13169618600},{"value":0},{"value":1792},{"value":7696581396226},{"value":7696581396226},{"value":1792},{"value":0},{"value":7696581396224},{"value":305},{"value":8756263144},{"value":0},{"value":105553121529616},{"value":105553121529680},{"value":13169619168},{"value":0},{"value":0},{"value":9472},{"value":9472},{"value":11520},{"value":18446744073709551615},{"value":105553196406104}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13169618720},"sp":{"value":13169618576},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959658,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":136568,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":28,"imageIndex":195},{"imageOffset":95156600,"imageIndex":56},{"imageOffset":95160968,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":4},{"value":0},{"value":9728},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13170192040},{"value":0},{"value":1792},{"value":7696581396226},{"value":7696581396226},{"value":1792},{"value":0},{"value":7696581396224},{"value":305},{"value":8756263144},{"value":0},{"value":105553121529616},{"value":105553121529680},{"value":13170192608},{"value":0},{"value":0},{"value":9728},{"value":9728},{"value":11776},{"value":18446744073709551615},{"value":105553196468280}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13170192160},"sp":{"value":13170192016},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959659,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":136568,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":28,"imageIndex":195},{"imageOffset":95156600,"imageIndex":56},{"imageOffset":95160968,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":4},{"value":0},{"value":9984},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13352201896},{"value":0},{"value":1792},{"value":7696581396226},{"value":7696581396226},{"value":1792},{"value":0},{"value":7696581396224},{"value":305},{"value":8756263144},{"value":0},{"value":105553121529616},{"value":105553121529680},{"value":13352202464},{"value":0},{"value":0},{"value":9984},{"value":9984},{"value":12032},{"value":18446744073709551615},{"value":105553196360952}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13352202016},"sp":{"value":13352201872},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":4959660,"frames":[{"imageOffset":17868,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":184},{"imageOffset":30868,"symbol":"_pthread_cond_wait","symbolLocation":1204,"imageIndex":185},{"imageOffset":136568,"symbol":"std::__1::condition_variable::wait(std::__1::unique_lock&)","symbolLocation":28,"imageIndex":195},{"imageOffset":95156600,"imageIndex":56},{"imageOffset":95160968,"imageIndex":56},{"imageOffset":29412,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":185},{"imageOffset":8444,"symbol":"thread_start","symbolLocation":8,"imageIndex":185}],"threadState":{"x":[{"value":260},{"value":0},{"value":10240},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":13352775336},{"value":0},{"value":1792},{"value":7696581396226},{"value":7696581396226},{"value":1792},{"value":0},{"value":7696581396224},{"value":305},{"value":8756263144},{"value":0},{"value":105553121529616},{"value":105553121529680},{"value":13352775904},{"value":0},{"value":0},{"value":10240},{"value":10240},{"value":12288},{"value":18446744073709551615},{"value":105553195185624}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6927382676},"cpsr":{"value":1610616832},"fp":{"value":13352775456},"sp":{"value":13352775312},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927128012},"far":{"value":0}}},{"id":5928095,"frames":[{"imageOffset":8424,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":185}],"threadState":{"x":[{"value":6190297088},{"value":146579},{"value":6189760512},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":6190297088},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927360232},"far":{"value":0}}},{"id":5935957,"frames":[{"imageOffset":8424,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":185}],"threadState":{"x":[{"value":6180007936},{"value":112323},{"value":6179471360},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":6180007936},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927360232},"far":{"value":0}}},{"id":5954102,"frames":[{"imageOffset":8424,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":185}],"threadState":{"x":[{"value":6126989312},{"value":91027},{"value":6126452736},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":6126989312},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927360232},"far":{"value":0}}},{"id":5955259,"frames":[{"imageOffset":8424,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":185}],"threadState":{"x":[{"value":6180581376},{"value":252951},{"value":6180044800},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":6180581376},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927360232},"far":{"value":0}}},{"id":5955356,"frames":[{"imageOffset":8424,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":185}],"threadState":{"x":[{"value":6192574464},{"value":110563},{"value":6192037888},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":6192574464},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927360232},"far":{"value":0}}},{"id":5955357,"frames":[{"imageOffset":8424,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":185}],"threadState":{"x":[{"value":6193147904},{"value":8779},{"value":6192611328},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":6193147904},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6927360232},"far":{"value":0}}}],
"usedImages" : [
{
"source" : "P",
"arch" : "arm64",
"base" : 4344463360,
"CFBundleShortVersionString" : "1.8.0",
"CFBundleIdentifier" : "edu.ucsf.cgl.ChimeraX",
"size" : 16384,
"uuid" : "17982d98-65bc-3327-8526-577ec996453c",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/MacOS\/ChimeraX",
"name" : "ChimeraX",
"CFBundleVersion" : "1.8.0.0"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4358815744,
"CFBundleShortVersionString" : "3.11.4, (c) 2001-2023 Python Software Foundation.",
"CFBundleIdentifier" : "org.python.python",
"size" : 3948544,
"uuid" : "88bffd37-99d8-36ab-9b95-9f54b30bd667",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/Python",
"name" : "Python",
"CFBundleVersion" : "3.11.4"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4347592704,
"size" : 49152,
"uuid" : "51d31d0d-1dcc-31ad-b6c1-73d57e544a3a",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/math.cpython-311-darwin.so",
"name" : "math.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4347330560,
"size" : 81920,
"uuid" : "3b2e1e73-f5e1-3fa3-80b3-e46009060893",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_datetime.cpython-311-darwin.so",
"name" : "_datetime.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4347510784,
"size" : 16384,
"uuid" : "39aa96c6-b691-3e20-9540-292b9dd1c861",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_typing.cpython-311-darwin.so",
"name" : "_typing.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4350050304,
"size" : 32768,
"uuid" : "65172ede-2b95-337d-970f-ed6c4a217cb1",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/zlib.cpython-311-darwin.so",
"name" : "zlib.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4351213568,
"size" : 16384,
"uuid" : "dc7a591b-ef8a-3b77-9396-ecee27303fdb",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_bz2.cpython-311-darwin.so",
"name" : "_bz2.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4351885312,
"size" : 196608,
"uuid" : "a4b86716-73ef-3046-b7ee-1d069dfd7cd0",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_lzma.cpython-311-darwin.so",
"name" : "_lzma.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4351295488,
"size" : 16384,
"uuid" : "a97f3cfd-a5a7-3ce2-9eb6-5ebc0943bd1d",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_bisect.cpython-311-darwin.so",
"name" : "_bisect.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4351377408,
"size" : 16384,
"uuid" : "1eab426b-5d06-3a22-b7b5-6dbc112704d6",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_random.cpython-311-darwin.so",
"name" : "_random.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4351459328,
"size" : 16384,
"uuid" : "487467f0-5417-397f-8fb9-43ce116abec8",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_sha512.cpython-311-darwin.so",
"name" : "_sha512.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4351541248,
"size" : 32768,
"uuid" : "c4b2ad90-cc7d-3780-bee9-9f1dbc2aa560",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/binascii.cpython-311-darwin.so",
"name" : "binascii.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4351639552,
"size" : 32768,
"uuid" : "167d8231-8346-37b6-9d67-149a1fe3df21",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_struct.cpython-311-darwin.so",
"name" : "_struct.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4351754240,
"size" : 16384,
"uuid" : "9e9f3dfb-1383-3420-bfcf-d996842d8e9e",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/fcntl.cpython-311-darwin.so",
"name" : "fcntl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4352180224,
"size" : 16384,
"uuid" : "d685528c-5d21-3c1a-b720-81f8ba0b399a",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_posixsubprocess.cpython-311-darwin.so",
"name" : "_posixsubprocess.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4352262144,
"size" : 32768,
"uuid" : "d25f2f2d-a87d-3870-ad6a-3d977d50c9ca",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/select.cpython-311-darwin.so",
"name" : "select.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4353409024,
"size" : 16384,
"uuid" : "6fbbcdd9-e49c-3a59-9ff0-32d41317e11c",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/arrays\/_arrays.cpython-311-darwin.so",
"name" : "_arrays.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4355457024,
"size" : 458752,
"uuid" : "3ef7d30f-bd93-3167-a91a-3f0a3f161d1b",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/arrays\/lib\/libarrays.dylib",
"name" : "libarrays.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4374937600,
"size" : 2670592,
"uuid" : "744b099b-9156-3efd-95ee-949f9bec068e",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/core\/_multiarray_umath.cpython-311-darwin.so",
"name" : "_multiarray_umath.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4470947840,
"size" : 21299200,
"uuid" : "9854a721-2573-3169-81ec-19ea40ce8077",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libopenblas64_.0.dylib",
"name" : "libopenblas64_.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4366155776,
"size" : 3522560,
"uuid" : "dd0e012a-b6de-31b1-a28e-260c7b51e595",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libgfortran.5.dylib",
"name" : "libgfortran.5.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4356096000,
"size" : 311296,
"uuid" : "6d39d54b-d80e-3218-a095-b81ad0b3be90",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libquadmath.0.dylib",
"name" : "libquadmath.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4349820928,
"size" : 65536,
"uuid" : "d9875303-8f38-33d9-a0d3-ab0adff3b915",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libgcc_s.1.1.dylib",
"name" : "libgcc_s.1.1.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4354932736,
"size" : 98304,
"uuid" : "ad5b1457-a682-3233-ac84-0f75b349239d",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_pickle.cpython-311-darwin.so",
"name" : "_pickle.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4349968384,
"size" : 16384,
"uuid" : "c1a0a0c0-1986-3338-a63d-eb396e783c91",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_contextvars.cpython-311-darwin.so",
"name" : "_contextvars.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4355112960,
"size" : 65536,
"uuid" : "340d4f4e-8cd4-3e24-9215-eb9235031bd3",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/core\/_multiarray_tests.cpython-311-darwin.so",
"name" : "_multiarray_tests.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4355260416,
"size" : 81920,
"uuid" : "6c214dd2-6044-3285-949b-8d8ba72ca17b",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_ctypes.cpython-311-darwin.so",
"name" : "_ctypes.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4354539520,
"size" : 98304,
"uuid" : "09f94631-f551-3559-ba88-aff49917d8fe",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/linalg\/_umath_linalg.cpython-311-darwin.so",
"name" : "_umath_linalg.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4354719744,
"size" : 65536,
"uuid" : "7b5335ce-92a1-3ae2-bde0-0e5d5641b2c9",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/fft\/_pocketfft_internal.cpython-311-darwin.so",
"name" : "_pocketfft_internal.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4372463616,
"size" : 622592,
"uuid" : "05ddaab9-9d7f-3317-a3c4-5e9936fe3ceb",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/mtrand.cpython-311-darwin.so",
"name" : "mtrand.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4358569984,
"size" : 147456,
"uuid" : "377e255e-f9a4-3173-8265-a899000c5d0f",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/bit_generator.cpython-311-darwin.so",
"name" : "bit_generator.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4371513344,
"size" : 196608,
"uuid" : "8590d52a-d755-3ffd-8f68-f9cb638359fc",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_common.cpython-311-darwin.so",
"name" : "_common.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4371169280,
"size" : 32768,
"uuid" : "322b4be7-35a8-331a-a549-7a0297d9dd70",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_hashlib.cpython-311-darwin.so",
"name" : "_hashlib.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4450598912,
"size" : 1687552,
"uuid" : "59149ee6-b873-3c5d-8fed-d11966210295",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/libcrypto.1.1.dylib",
"name" : "libcrypto.1.1.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4371283968,
"size" : 32768,
"uuid" : "3206e248-2c9b-345c-98ac-8f9dfc6d639b",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_blake2.cpython-311-darwin.so",
"name" : "_blake2.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4371791872,
"size" : 311296,
"uuid" : "0033ea49-a161-3564-b09e-6a6c3b902698",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_bounded_integers.cpython-311-darwin.so",
"name" : "_bounded_integers.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4370939904,
"size" : 65536,
"uuid" : "7dab4595-a351-3061-861b-c426baee85b3",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_mt19937.cpython-311-darwin.so",
"name" : "_mt19937.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4372185088,
"size" : 65536,
"uuid" : "d3035eea-ed0e-398a-afbe-f9a8016701db",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_philox.cpython-311-darwin.so",
"name" : "_philox.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4373528576,
"size" : 81920,
"uuid" : "35fb9307-f991-3159-86db-21f6c67b9198",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_pcg64.cpython-311-darwin.so",
"name" : "_pcg64.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4371382272,
"size" : 49152,
"uuid" : "17a4344b-3221-36c4-9019-53cc1223e124",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_sfc64.cpython-311-darwin.so",
"name" : "_sfc64.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4373692416,
"size" : 737280,
"uuid" : "49451e8a-e3c8-3429-83d8-249e81e378cd",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_generator.cpython-311-darwin.so",
"name" : "_generator.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4354850816,
"size" : 16384,
"uuid" : "5973ec29-8c62-3285-97ee-5797aef28b1c",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_opcode.cpython-311-darwin.so",
"name" : "_opcode.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4373200896,
"size" : 114688,
"uuid" : "229d2556-e1e0-3432-9458-1636804585a5",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/geometry\/_geometry.cpython-311-darwin.so",
"name" : "_geometry.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4372332544,
"size" : 32768,
"uuid" : "0722922a-a378-3dee-b11b-96d1ae381b09",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_json.cpython-311-darwin.so",
"name" : "_json.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4460429312,
"size" : 1769472,
"uuid" : "80f789cb-18ee-3995-a59b-03dc33158c84",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtCore.abi3.so",
"name" : "QtCore.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4452925440,
"size" : 4849664,
"uuid" : "113c92ac-6022-34c0-8532-0a96c67af294",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtCore.framework\/Versions\/A\/QtCore",
"name" : "QtCore"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 4374544384,
"CFBundleShortVersionString" : "3.0",
"CFBundleIdentifier" : "com.apple.security.csparser",
"size" : 131072,
"uuid" : "aaf0c824-10a7-3470-8a03-b41b7d2dd289",
"path" : "\/System\/Library\/Frameworks\/Security.framework\/Versions\/A\/PlugIns\/csparser.bundle\/Contents\/MacOS\/csparser",
"name" : "csparser",
"CFBundleVersion" : "61439.40.45.0.1"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4449976320,
"size" : 81920,
"uuid" : "b6b22843-cb0a-3d00-952e-37e8808d2ee8",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/sip.cpython-311-darwin.so",
"name" : "sip.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4765777920,
"size" : 3112960,
"uuid" : "ee8cff87-6a5d-38d1-8403-031c9916b0fb",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWidgets.abi3.so",
"name" : "QtWidgets.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4747952128,
"size" : 4554752,
"uuid" : "3f78f0e3-d0d9-3375-a27c-2906014b5fe2",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWidgets.framework\/Versions\/A\/QtWidgets",
"name" : "QtWidgets"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4806230016,
"size" : 6537216,
"uuid" : "e1e85506-35dd-32b9-b614-7f3179359271",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtGui.framework\/Versions\/A\/QtGui",
"name" : "QtGui"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4459708416,
"size" : 507904,
"uuid" : "7a365b1d-ddab-3dec-80b0-d21186597d32",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtDBus.framework\/Versions\/A\/QtDBus",
"name" : "QtDBus"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4796514304,
"size" : 1572864,
"uuid" : "c8d7e625-2a13-3c34-9dff-b6656a6f86e7",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtGui.abi3.so",
"name" : "QtGui.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4464197632,
"size" : 65536,
"uuid" : "e159845d-c85f-317e-a1d0-225a578b8d24",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebEngineWidgets.abi3.so",
"name" : "QtWebEngineWidgets.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4450172928,
"size" : 98304,
"uuid" : "16db4b50-36fd-3e6b-a27f-a1c2f3f65a0e",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineWidgets.framework\/Versions\/A\/QtWebEngineWidgets",
"name" : "QtWebEngineWidgets"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4464361472,
"size" : 278528,
"uuid" : "69a381be-74c3-3943-839e-c2710e3b1221",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtPrintSupport.framework\/Versions\/A\/QtPrintSupport",
"name" : "QtPrintSupport"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5873795072,
"size" : 165756928,
"uuid" : "72eb72da-af14-3e6d-a878-889044e69fe6",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineCore.framework\/Versions\/A\/QtWebEngineCore",
"name" : "QtWebEngineCore"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4799840256,
"size" : 3899392,
"uuid" : "cd78ea4b-fdea-35f8-9425-2acf80e29b96",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQuick.framework\/Versions\/A\/QtQuick",
"name" : "QtQuick"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4470079488,
"size" : 409600,
"uuid" : "69fc8b0b-b6a0-3e08-8bac-584a6a3a93b0",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtOpenGL.framework\/Versions\/A\/QtOpenGL",
"name" : "QtOpenGL"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4695621632,
"size" : 540672,
"uuid" : "054ea112-953a-32d0-a58f-bc186ae37747",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQmlModels.framework\/Versions\/A\/QtQmlModels",
"name" : "QtQmlModels"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4753965056,
"size" : 163840,
"uuid" : "bcc67564-cc1c-3017-b5f1-0b6e1b0e993c",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebChannel.framework\/Versions\/A\/QtWebChannel",
"name" : "QtWebChannel"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4823842816,
"size" : 3833856,
"uuid" : "432c2bd3-2e4c-3089-b092-df3547feaafd",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQml.framework\/Versions\/A\/QtQml",
"name" : "QtQml"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4814045184,
"size" : 1081344,
"uuid" : "fed592df-e45a-3887-b02f-65e20ff51c4b",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtNetwork.framework\/Versions\/A\/QtNetwork",
"name" : "QtNetwork"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4738924544,
"size" : 442368,
"uuid" : "a02974a0-e1a7-316f-8e3b-ae2e03dc4433",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtPositioning.framework\/Versions\/A\/QtPositioning",
"name" : "QtPositioning"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4450402304,
"size" : 81920,
"uuid" : "55f5d063-f2ad-361c-ad8d-afc759bfeec1",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQuickWidgets.framework\/Versions\/A\/QtQuickWidgets",
"name" : "QtQuickWidgets"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4795236352,
"size" : 491520,
"uuid" : "07f8ba95-385f-3636-aaf1-1cee596fe424",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtNetwork.abi3.so",
"name" : "QtNetwork.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4793040896,
"size" : 163840,
"uuid" : "88b20f5e-7cfd-31bb-ac2c-68580822b362",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtPrintSupport.abi3.so",
"name" : "QtPrintSupport.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4374790144,
"size" : 32768,
"uuid" : "a169d745-309d-33d5-a2e6-e7c4e96708be",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebChannel.abi3.so",
"name" : "QtWebChannel.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4772134912,
"size" : 229376,
"uuid" : "5b3816f5-31a1-3950-9b9a-77d1f921188c",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebEngineCore.abi3.so",
"name" : "QtWebEngineCore.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4793925632,
"size" : 638976,
"uuid" : "68fd5eb3-4cdf-3190-8b80-e5378d6b4c9d",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/platforms\/libqcocoa.dylib",
"name" : "libqcocoa.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 4805476352,
"CFBundleShortVersionString" : "1.0",
"CFBundleIdentifier" : "com.apple.AppleMetalOpenGLRenderer",
"size" : 425984,
"uuid" : "4b92d503-bb7d-3f61-99e6-0ace7335be9d",
"path" : "\/System\/Library\/Extensions\/AppleMetalOpenGLRenderer.bundle\/Contents\/MacOS\/AppleMetalOpenGLRenderer",
"name" : "AppleMetalOpenGLRenderer",
"CFBundleVersion" : "1"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 5041553408,
"CFBundleShortVersionString" : "322.7.2",
"CFBundleIdentifier" : "com.apple.AGXMetalG14G",
"size" : 7487488,
"uuid" : "3a14cbe0-2e93-3792-b371-c2511d21e21a",
"path" : "\/System\/Library\/Extensions\/AGXMetalG14G.bundle\/Contents\/MacOS\/AGXMetalG14G",
"name" : "AGXMetalG14G",
"CFBundleVersion" : "322.7.2"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5011898368,
"size" : 147456,
"uuid" : "240cb694-5652-380e-a13f-72e024b43ffc",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/styles\/libqmacstyle.dylib",
"name" : "libqmacstyle.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5012160512,
"size" : 163840,
"uuid" : "78ab6dee-103a-31de-bb4e-ea5e9b694cb0",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/pyexpat.cpython-311-darwin.so",
"name" : "pyexpat.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4828528640,
"size" : 65536,
"uuid" : "ff7c6b72-2303-3d40-a4fa-f3d840425be2",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_socket.cpython-311-darwin.so",
"name" : "_socket.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4831494144,
"size" : 49152,
"uuid" : "0895ead1-fff8-3401-9c5c-5c4254ce969b",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/array.cpython-311-darwin.so",
"name" : "array.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4831395840,
"size" : 16384,
"uuid" : "157e3710-caca-35b5-9fda-d1c4efc75429",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_heapq.cpython-311-darwin.so",
"name" : "_heapq.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4831625216,
"size" : 16384,
"uuid" : "b3287e1f-ce2c-3c6f-bc12-deb15c14593c",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_queue.cpython-311-darwin.so",
"name" : "_queue.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5013946368,
"size" : 98304,
"uuid" : "5c15959b-b36d-32f8-80b0-b0558dbb9fcc",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_ssl.cpython-311-darwin.so",
"name" : "_ssl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5017567232,
"size" : 344064,
"uuid" : "edcc52bf-058b-3550-8a40-7e432a5ee6bb",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/libssl.1.1.dylib",
"name" : "libssl.1.1.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4831707136,
"size" : 16384,
"uuid" : "cd5f3f7c-54a3-322d-a180-6c7b94deed82",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_scproxy.cpython-311-darwin.so",
"name" : "_scproxy.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4992122880,
"size" : 16384,
"uuid" : "ecf905dd-b03f-3e39-a475-0f3103f3e6d3",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/grp.cpython-311-darwin.so",
"name" : "grp.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4831232000,
"size" : 32768,
"uuid" : "d197680c-26b9-3292-85bc-f61af0ff34bb",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_csv.cpython-311-darwin.so",
"name" : "_csv.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5013651456,
"size" : 16384,
"uuid" : "0d834156-6229-3383-833b-5e4dbda14b77",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/_load_libs.cpython-311-darwin.so",
"name" : "_load_libs.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5054693376,
"size" : 1114112,
"uuid" : "fd7b00a2-d609-31e8-8ce3-7c101acdcbbe",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libatomstruct.dylib",
"name" : "libatomstruct.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5013487616,
"size" : 32768,
"uuid" : "3db66b4e-c7b2-34b6-ae7b-bb92d644ccb7",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libelement.dylib",
"name" : "libelement.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5014175744,
"size" : 16384,
"uuid" : "5f3c3a7c-ae17-3758-b5c7-5e9a0d0a4a39",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libpyinstance.dylib",
"name" : "libpyinstance.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5051924480,
"size" : 180224,
"uuid" : "106fe191-9c12-3ced-bb2f-fa38a412daf1",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/libmolc.dylib",
"name" : "libmolc.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5050990592,
"size" : 425984,
"uuid" : "de33f8cb-88d5-3371-851a-e5de0f9689c2",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/cymol.cpython-311-darwin.so",
"name" : "cymol.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5022318592,
"size" : 98304,
"uuid" : "12f930bf-d331-3ae7-88cb-fbf14c2f66f7",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/tinyarray.cpython-311-darwin.so",
"name" : "tinyarray.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5013733376,
"size" : 49152,
"uuid" : "fe5b0329-3d3a-3bfa-a7e9-e6c0e583311e",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/cytmpl.cpython-311-darwin.so",
"name" : "cytmpl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5065965568,
"size" : 4472832,
"uuid" : "23682f97-f94a-318d-bcf7-3974d2037b87",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/clipper_python.cpython-311-darwin.so",
"name" : "clipper_python.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5062639616,
"size" : 1409024,
"uuid" : "c38bbb4a-a92b-3566-8624-76c6348adf6d",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/libclipper.dylib",
"name" : "libclipper.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5053415424,
"size" : 245760,
"uuid" : "c3865512-d750-3117-847d-2194b3a17e9a",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/libclipper_cx.dylib",
"name" : "libclipper_cx.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5059182592,
"size" : 655360,
"uuid" : "b2b5054b-8abe-3321-9f13-a1e4708a7016",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/libmmdb2.dylib",
"name" : "libmmdb2.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5056462848,
"size" : 180224,
"uuid" : "8de57ee0-c25c-3471-a59e-560a7265901c",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/libccp4.dylib",
"name" : "libccp4.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5017436160,
"size" : 32768,
"uuid" : "928e4872-fb23-3179-ab28-a0703eeacaf3",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/lib_symmetry.dylib",
"name" : "lib_symmetry.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4992204800,
"size" : 16384,
"uuid" : "f7ba4378-2a5b-36d2-902f-e798b7325903",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/lib_geometry.dylib",
"name" : "lib_geometry.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5078056960,
"size" : 2392064,
"uuid" : "cb33c0c1-097b-37f6-b661-a638b15c5236",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/openmm\/_openmm.cpython-311-darwin.so",
"name" : "_openmm.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5071814656,
"size" : 2539520,
"uuid" : "929fff8a-63c6-35c5-a670-b20b8a5c07b5",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/libOpenMM.8.0.dylib",
"name" : "libOpenMM.8.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5054070784,
"size" : 196608,
"uuid" : "d2f10c18-a6a6-3ec7-973a-f7be6bc0663c",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/libOpenMMAmoeba.dylib",
"name" : "libOpenMMAmoeba.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5054447616,
"size" : 49152,
"uuid" : "27e83aa9-6c95-379a-b7ce-243b2a629e40",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/libOpenMMRPMD.dylib",
"name" : "libOpenMMRPMD.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5051662336,
"size" : 81920,
"uuid" : "c543a16d-57e2-3d60-a57f-57b7ce544045",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/libOpenMMDrude.dylib",
"name" : "libOpenMMDrude.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5065555968,
"size" : 278528,
"uuid" : "e6443cf5-703e-3350-b548-a52a27985589",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMPME.dylib",
"name" : "libOpenMMPME.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5060493312,
"size" : 360448,
"uuid" : "ea7f20fe-b418-3539-b19a-dea10a527734",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMCPU.dylib",
"name" : "libOpenMMCPU.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5087248384,
"size" : 2392064,
"uuid" : "13541c96-8b6e-358f-be6b-dc44c3da449d",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMMetal.dylib",
"name" : "libOpenMMMetal.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5090050048,
"size" : 1736704,
"uuid" : "e42a167c-c8b9-36e0-8f47-29f650dbf95e",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMOpenCL.dylib",
"name" : "libOpenMMOpenCL.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5058854912,
"size" : 81920,
"uuid" : "f537219c-8f3f-34ff-a0a4-b7f698fca73f",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMRPMDMetal.dylib",
"name" : "libOpenMMRPMDMetal.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5059018752,
"size" : 81920,
"uuid" : "71356ce6-4e63-38c5-9b24-2e72729d01f9",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMRPMDOpenCL.dylib",
"name" : "libOpenMMRPMDOpenCL.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5076566016,
"size" : 65536,
"uuid" : "65f50420-30f1-38d5-bc58-9b9f38058b67",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMDrudeMetal.dylib",
"name" : "libOpenMMDrudeMetal.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5076713472,
"size" : 786432,
"uuid" : "f7c6d224-e40d-3588-bc37-fc3adfeab0f6",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMAmoebaMetal.dylib",
"name" : "libOpenMMAmoebaMetal.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5077630976,
"size" : 81920,
"uuid" : "1e07b6b0-20f3-32e4-9755-2ec88a5977f7",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMDrudeOpenCL.dylib",
"name" : "libOpenMMDrudeOpenCL.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5083250688,
"size" : 819200,
"uuid" : "d4ea25d8-3107-3e51-adf1-3de6bd087b59",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMAmoebaOpenCL.dylib",
"name" : "libOpenMMAmoebaOpenCL.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5061115904,
"size" : 180224,
"uuid" : "d779ade2-dbaa-35de-bfce-b70dfab99c21",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMRPMDReference.dylib",
"name" : "libOpenMMRPMDReference.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5081251840,
"size" : 49152,
"uuid" : "288c8c3b-7f38-3568-a5c7-5b260ac83337",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMDrudeReference.dylib",
"name" : "libOpenMMDrudeReference.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5084200960,
"size" : 458752,
"uuid" : "b9f0fa3a-7b55-3d41-bdf5-f73c0166d80e",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/lib\/plugins\/libOpenMMAmoebaReference.dylib",
"name" : "libOpenMMAmoebaReference.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5077794816,
"size" : 49152,
"uuid" : "8b3adc07-2911-37e0-b3cd-a1fbfa2a4ade",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_elementtree.cpython-311-darwin.so",
"name" : "_elementtree.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5082841088,
"size" : 114688,
"uuid" : "2636e864-bbd2-36cc-b229-27e7e64e6288",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/openmm\/app\/internal\/compiled.cpython-311-darwin.so",
"name" : "compiled.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5098176512,
"size" : 491520,
"uuid" : "85b12d9d-78ba-3324-8cb1-0e5077d97907",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/libmolc.dylib",
"name" : "libmolc.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5084872704,
"size" : 409600,
"uuid" : "358a0dd4-0955-30b7-a45c-561026d32a66",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/map\/_map.cpython-311-darwin.so",
"name" : "_map.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5022564352,
"size" : 16384,
"uuid" : "89141903-d9ce-369c-b76f-2f794585b0e3",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/charset_normalizer\/md.cpython-311-darwin.so",
"name" : "md.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5082431488,
"size" : 147456,
"uuid" : "3a5bf6ce-7cc0-327a-8ff1-52f7adac24a4",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/charset_normalizer\/md__mypyc.cpython-311-darwin.so",
"name" : "md__mypyc.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5640585216,
"size" : 1114112,
"uuid" : "5200c6a0-ccdb-3607-9947-1defdd6fb647",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/unicodedata.cpython-311-darwin.so",
"name" : "unicodedata.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5054578688,
"size" : 32768,
"uuid" : "7503f11a-978c-3a80-b5da-ab207a441c5e",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_multibytecodec.cpython-311-darwin.so",
"name" : "_multibytecodec.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5051842560,
"size" : 16384,
"uuid" : "8eb0c267-c007-3e24-9604-1f0a78868795",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_uuid.cpython-311-darwin.so",
"name" : "_uuid.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5086642176,
"size" : 262144,
"uuid" : "f2c706bd-a2c4-39ce-b4c0-048c01ea0eca",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_decimal.cpython-311-darwin.so",
"name" : "_decimal.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5096390656,
"size" : 376832,
"uuid" : "be0ff669-9570-3fbc-b643-583c25c53bcc",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/_imaging.cpython-311-darwin.so",
"name" : "_imaging.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5099356160,
"size" : 688128,
"uuid" : "15feb07e-8bff-3562-a02a-8cf33732e6df",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libtiff.6.dylib",
"name" : "libtiff.6.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5643190272,
"size" : 524288,
"uuid" : "f077add4-3b80-3e03-9f5d-d46370a8594f",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libjpeg.62.4.0.dylib",
"name" : "libjpeg.62.4.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5643829248,
"size" : 606208,
"uuid" : "78bac0b1-a0df-3e6e-b906-cbc961cdb354",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libopenjp2.2.5.2.dylib",
"name" : "libopenjp2.2.5.2.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5083054080,
"size" : 114688,
"uuid" : "aa2246c4-3418-31d6-b63c-b12523be454f",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libz.1.3.1.dylib",
"name" : "libz.1.3.1.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5634572288,
"size" : 163840,
"uuid" : "72b5dc2b-0af5-32a5-8a55-1a0cc0dd14e0",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libxcb.1.dylib",
"name" : "libxcb.1.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5642452992,
"size" : 262144,
"uuid" : "8a87fb4d-f743-3c9e-bee7-721b8d2f34ac",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/liblzma.5.dylib",
"name" : "liblzma.5.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5061394432,
"size" : 16384,
"uuid" : "55c39336-6291-32f1-a957-7d880570affd",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libXau.6.0.0.dylib",
"name" : "libXau.6.0.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5062524928,
"size" : 16384,
"uuid" : "10cb0192-6e54-3232-ba83-11bac176e9df",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/termios.cpython-311-darwin.so",
"name" : "termios.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5077942272,
"size" : 16384,
"uuid" : "fdd4ed4b-946d-3635-b962-de82abc3462a",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_c_internal_utils.cpython-311-darwin.so",
"name" : "_c_internal_utils.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5087035392,
"size" : 114688,
"uuid" : "f78c05df-89c8-38d5-90fa-ae102328b198",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_path.cpython-311-darwin.so",
"name" : "_path.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5647679488,
"size" : 589824,
"uuid" : "d33db4fb-c546-3a3f-af92-06b3acf9a005",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/ft2font.cpython-311-darwin.so",
"name" : "ft2font.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5640290304,
"size" : 114688,
"uuid" : "7d718d62-a2e1-318a-8f9d-9b2ac2293986",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/kiwisolver\/_cext.cpython-311-darwin.so",
"name" : "_cext.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5642223616,
"size" : 114688,
"uuid" : "5d45ac62-e87c-31ae-9f9a-8bdc101f61d2",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_image.cpython-311-darwin.so",
"name" : "_image.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5082693632,
"size" : 49152,
"uuid" : "4c5d42bf-4e9d-3c59-bf2e-303deda3aeb2",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/errorchecker.cpython-311-darwin.so",
"name" : "errorchecker.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5641781248,
"size" : 196608,
"uuid" : "c4b0c9bc-a01b-3cf7-b16b-77f9b13b6cd9",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/arraydatatype.cpython-311-darwin.so",
"name" : "arraydatatype.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5642797056,
"size" : 229376,
"uuid" : "33919aef-b02e-386a-8f81-a661fe002ddc",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/wrapper.cpython-311-darwin.so",
"name" : "wrapper.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5096947712,
"size" : 65536,
"uuid" : "d9a192eb-4bf9-362f-99d4-f6bc1e368b01",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/formathandler.cpython-311-darwin.so",
"name" : "formathandler.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5634867200,
"size" : 49152,
"uuid" : "38eab131-624a-32cf-8d4e-374bca53e017",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/latebind.cpython-311-darwin.so",
"name" : "latebind.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5682708480,
"size" : 131072,
"uuid" : "3ef700f1-b0ef-333f-8291-6877887bedaa",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/vbo.cpython-311-darwin.so",
"name" : "vbo.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5682233344,
"size" : 147456,
"uuid" : "93458d84-c67a-3585-8201-ff7b58cc50a6",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/surface\/_surface.cpython-311-darwin.so",
"name" : "_surface.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5085478912,
"size" : 16384,
"uuid" : "6ea2ba5a-5354-35d2-a092-0249bbb6d929",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb_lib\/_load_libs.cpython-311-darwin.so",
"name" : "_load_libs.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5642108928,
"size" : 32768,
"uuid" : "b0eab6c4-6692-3eac-bea4-60c69e87993c",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb_lib\/lib\/libpdbconnect.dylib",
"name" : "libpdbconnect.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5100175360,
"size" : 32768,
"uuid" : "e00ce596-2864-3abf-bdff-8a38c7f22299",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqgif.dylib",
"name" : "libqgif.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5701009408,
"size" : 32768,
"uuid" : "dbf1d60b-d923-3193-a32e-96d3a81b9556",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqwbmp.dylib",
"name" : "libqwbmp.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5712805888,
"size" : 442368,
"uuid" : "d64ad34b-954b-3e65-b4b7-cb030bea2c1e",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqwebp.dylib",
"name" : "libqwebp.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5710348288,
"size" : 32768,
"uuid" : "0552b37d-fa94-3519-9b5c-94cb314a2cd1",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqico.dylib",
"name" : "libqico.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5710446592,
"size" : 32768,
"uuid" : "df91425d-7fd1-3fc7-90c3-147cb82c19db",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqmacheif.dylib",
"name" : "libqmacheif.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5711593472,
"size" : 425984,
"uuid" : "faac1c6c-772a-36fc-99b1-1796fe013571",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqjpeg.dylib",
"name" : "libqjpeg.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5712101376,
"size" : 393216,
"uuid" : "d172365c-3e61-356e-841b-8eebabcb45da",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqtiff.dylib",
"name" : "libqtiff.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5712576512,
"size" : 32768,
"uuid" : "77608453-0c22-327c-909a-3e61997f035f",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqsvg.dylib",
"name" : "libqsvg.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5714116608,
"size" : 229376,
"uuid" : "6ae5d9b1-7feb-31a5-b3c1-09bfbb908790",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtSvg.framework\/Versions\/A\/QtSvg",
"name" : "QtSvg"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5712674816,
"size" : 32768,
"uuid" : "2170e2a2-3e24-3e7d-889f-70bfe1445514",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqpdf.dylib",
"name" : "libqpdf.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5732220928,
"size" : 8011776,
"uuid" : "2297c440-bc47-3988-b508-c4f43a12de4c",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtPdf.framework\/Versions\/A\/QtPdf",
"name" : "QtPdf"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5713330176,
"size" : 32768,
"uuid" : "aaf72e4f-a4b5-3143-abe4-cd0b9c88e736",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqicns.dylib",
"name" : "libqicns.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5713428480,
"size" : 32768,
"uuid" : "97f0c601-577c-3e3d-9728-1b67a04a846f",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqtga.dylib",
"name" : "libqtga.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5713526784,
"size" : 32768,
"uuid" : "73065b31-2315-3d94-8ece-5a8b66a743b4",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqmacjp2.dylib",
"name" : "libqmacjp2.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 5682626560,
"size" : 49152,
"uuid" : "f1242604-dcb7-30a9-a19a-182991e6e645",
"path" : "\/usr\/lib\/libobjc-trampolines.dylib",
"name" : "libobjc-trampolines.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5713625088,
"size" : 16384,
"uuid" : "117d4c42-f31b-3051-a57f-edb1c3f20c84",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/core\/_mac_util.cpython-311-darwin.so",
"name" : "_mac_util.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5873221632,
"size" : 81920,
"uuid" : "703104dc-b212-3b8d-9c78-4f57b3c9cb18",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/numpy_formathandler.cpython-311-darwin.so",
"name" : "numpy_formathandler.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5873401856,
"size" : 49152,
"uuid" : "12c53516-421d-3f7a-a81e-95bcfdb8a3ff",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/nones_formathandler.cpython-311-darwin.so",
"name" : "nones_formathandler.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13074497536,
"size" : 81920,
"uuid" : "d7bd530c-3353-37a6-b81f-ee3179d65811",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/lz4\/_version.cpython-311-darwin.so",
"name" : "_version.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13074186240,
"size" : 180224,
"uuid" : "87eed069-25fc-30f6-aa30-1e54859d92e2",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/lz4\/frame\/_frame.cpython-311-darwin.so",
"name" : "_frame.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13075152896,
"size" : 131072,
"uuid" : "f5aa887d-ba83-3ffc-a567-69cef02c403b",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/core\/_serialize.cpython-311-darwin.so",
"name" : "_serialize.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13075382272,
"size" : 131072,
"uuid" : "650aead6-ce16-39bb-9ba1-4bf9986b96d6",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/msgpack\/_cmsgpack.cpython-311-darwin.so",
"name" : "_cmsgpack.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13075628032,
"size" : 753664,
"uuid" : "b6b681ee-3078-3901-a867-0f46c38489a1",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtOpenGL.abi3.so",
"name" : "QtOpenGL.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13074956288,
"size" : 49152,
"uuid" : "cf3da9e7-3f71-33cf-8133-69a177c7de19",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtOpenGLWidgets.abi3.so",
"name" : "QtOpenGLWidgets.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13077037056,
"size" : 49152,
"uuid" : "bca2dfd9-9c81-3013-a4e9-0505eec8b180",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtOpenGLWidgets.framework\/Versions\/A\/QtOpenGLWidgets",
"name" : "QtOpenGLWidgets"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 6122799104,
"size" : 81920,
"uuid" : "2f167b0b-b0ab-3b3f-a99e-27fc153b427d",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/_ribbons.cpython-311-darwin.so",
"name" : "_ribbons.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 6122635264,
"size" : 16384,
"uuid" : "c802abe8-4352-3827-8717-7d4c0f0892ff",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/graphics\/_graphics.cpython-311-darwin.so",
"name" : "_graphics.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 6125076480,
"size" : 458752,
"uuid" : "6b6db01c-1280-3773-b08f-d693798baba7",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/mmcif.cpython-311-darwin.so",
"name" : "mmcif.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13115621376,
"size" : 409600,
"uuid" : "f03f0cb6-82d1-33ee-a10b-cc8d92c14417",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/_mmcif.cpython-311-darwin.so",
"name" : "_mmcif.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13074644992,
"size" : 147456,
"uuid" : "96691a20-aa26-3905-98c4-0939edf5bdd4",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb\/_pdbio.cpython-311-darwin.so",
"name" : "_pdbio.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 6122422272,
"size" : 32768,
"uuid" : "2c043e84-38d8-33d9-a9a4-ff18ae1f885f",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/psutil\/_psutil_osx.abi3.so",
"name" : "_psutil_osx.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 6122536960,
"size" : 16384,
"uuid" : "802f0c32-e7ad-3a81-ac8d-ae72c0022ae6",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/psutil\/_psutil_posix.abi3.so",
"name" : "_psutil_posix.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13127696384,
"size" : 4096000,
"uuid" : "3c92d9be-9b63-3d45-838a-e4fd342ddf46",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/lxml\/etree.cpython-311-darwin.so",
"name" : "etree.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 13115277312,
"size" : 147456,
"uuid" : "0ee9ca02-13c3-3c35-99ec-fdcf207a8b79",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/lxml\/_elementpath.cpython-311-darwin.so",
"name" : "_elementpath.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5773344768,
"size" : 32768,
"uuid" : "f6112c45-e8b3-3787-a9ab-c7209e77530f",
"path" : "\/Applications\/ChimeraX-1.8.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/_imagingmath.cpython-311-darwin.so",
"name" : "_imagingmath.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6927110144,
"size" : 241656,
"uuid" : "9ac9c551-8981-3c12-8b87-06912536a522",
"path" : "\/usr\/lib\/system\/libsystem_kernel.dylib",
"name" : "libsystem_kernel.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6927351808,
"size" : 53248,
"uuid" : "ef968926-415e-31f4-a137-937bc030facb",
"path" : "\/usr\/lib\/system\/libsystem_pthread.dylib",
"name" : "libsystem_pthread.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6925885440,
"size" : 532476,
"uuid" : "8c589616-d0fc-3f42-86e6-5f40cc5ad293",
"path" : "\/usr\/lib\/system\/libsystem_c.dylib",
"name" : "libsystem_c.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6927581184,
"size" : 32740,
"uuid" : "6b676d61-92a1-372f-98ae-88c1955083dd",
"path" : "\/usr\/lib\/system\/libsystem_platform.dylib",
"name" : "libsystem_platform.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6990209024,
"CFBundleShortVersionString" : "6.9",
"CFBundleIdentifier" : "com.apple.AppKit",
"size" : 20926464,
"uuid" : "e75c43a6-6b7c-36e6-bf8d-6a61a2696986",
"path" : "\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit",
"name" : "AppKit",
"CFBundleVersion" : "2575.20.8.1"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 7023472640,
"CFBundleShortVersionString" : "1.600.0",
"CFBundleIdentifier" : "com.apple.SkyLight",
"size" : 5324800,
"uuid" : "db2b8218-5dc6-3dbd-9416-bac69e50c247",
"path" : "\/System\/Library\/PrivateFrameworks\/SkyLight.framework\/Versions\/A\/SkyLight",
"name" : "SkyLight"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6925582336,
"size" : 290816,
"uuid" : "09bd7c4d-0431-3523-a3e7-0fe537e2b60d",
"path" : "\/usr\/lib\/system\/libdispatch.dylib",
"name" : "libdispatch.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6927810560,
"CFBundleShortVersionString" : "6.9",
"CFBundleIdentifier" : "com.apple.CoreFoundation",
"size" : 5197824,
"uuid" : "89bd70cd-9dc8-3cf7-b89d-e1e6b2a51567",
"path" : "\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation",
"name" : "CoreFoundation",
"CFBundleVersion" : "3103.1"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 7117578240,
"CFBundleShortVersionString" : "2.1.1",
"CFBundleIdentifier" : "com.apple.HIToolbox",
"size" : 3178496,
"uuid" : "5d9bac55-7f25-3f44-b27b-550cbdc0f589",
"path" : "\/System\/Library\/Frameworks\/Carbon.framework\/Versions\/A\/Frameworks\/HIToolbox.framework\/Versions\/A\/HIToolbox",
"name" : "HIToolbox"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6923673600,
"size" : 534456,
"uuid" : "6daeb662-d459-3520-a2ff-496b7f36f4c0",
"path" : "\/usr\/lib\/dyld",
"name" : "dyld"
},
{
"size" : 0,
"source" : "A",
"base" : 0,
"uuid" : "00000000-0000-0000-0000-000000000000"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6926417920,
"size" : 581628,
"uuid" : "601f843f-71f1-30bb-88fb-55b131097d1d",
"path" : "\/usr\/lib\/libc++.1.dylib",
"name" : "libc++.1.dylib"
}
],
"sharedCache" : {
"base" : 6922862592,
"size" : 4744167424,
"uuid" : "dda2710b-45d7-3ce8-9b06-e06b341328af"
},
"legacyInfo" : {
"threadTriggered" : {
"name" : "CrBrowserMain",
"queue" : "com.apple.main-thread"
}
},
"logWritingSignature" : "90f65f0e48f732685e434c4e3acb47796d09022f",
"trialInfo" : {
"rollouts" : [
{
"rolloutId" : "645eb1d0417dab722a215927",
"factorPackIds" : {
},
"deploymentId" : 250000006
},
{
"rolloutId" : "5f72dc58705eff005a46b3a9",
"factorPackIds" : {
},
"deploymentId" : 250000014
}
],
"experiments" : [
{
"treatmentId" : "c47ab4cc-c9c3-4b5d-a87c-e2433ce02597",
"experimentId" : "6639bc6ba73d460582162323",
"deploymentId" : 400000006
}
]
}
}
===== Log before crash start =====
UCSF ChimeraX version: 1.8 (2024-06-10)
© 2016-2024 Regents of the University of California. All rights reserved.
> open "/Users/nik/Desktop/Yang_Lab/Chimera Sessions/H5_J49.cxs"
Opened cryosparc_P26_J64_map.mrc as #1, grid size 256,256,256, pixel 0.94,
shown at level 0.0771, step 1, values float32
Log from Wed Oct 2 13:03:32 2024 Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.8 (2024-06-10)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/nik/Downloads/cryosparc_P26_J49_005_volume_map_sharp.mrc
Opened cryosparc_P26_J49_005_volume_map_sharp.mrc as #1, grid size
256,256,256, pixel 0.94, shown at level 0.135, step 1, values float32
> volume #1 level 0.2299
> open /Users/nik/Downloads/6pd6.pdb1
6pd6.pdb1 title:
Crystal structure of A H5N1 influenza virus hemagglutinin At pH 7.0 [more
info...]
Chain information for 6pd6.pdb1
---
Chain | Description
2.1/A | No description available
2.2/A 2.3/A | No description available
Drag select of 1167 atoms, 1473 residues, 3 pseudobonds, 1021 bonds
> color sel bychain
> ui mousemode right "translate selected models"
> view matrix models
> #2.1,1,0,0,175.61,0,1,0,78.67,0,0,1,142.07,#2.2,1,0,0,175.61,0,1,0,78.67,0,0,1,142.07,#2.3,1,0,0,175.61,0,1,0,78.67,0,0,1,142.07
> view matrix models
> #2.1,1,0,0,171.84,0,1,0,87.429,0,0,1,140.16,#2.2,1,0,0,171.84,0,1,0,87.429,0,0,1,140.16,#2.3,1,0,0,171.84,0,1,0,87.429,0,0,1,140.16
> transparency 50
> ui mousemode right "rotate selected models"
> view matrix models
> #2.1,0.91491,-0.40282,0.025878,179.2,0.40342,0.91468,-0.024714,113.09,-0.013715,0.03305,0.99936,138.37,#2.2,0.91491,-0.40282,0.025878,179.2,0.40342,0.91468,-0.024714,113.09,-0.013715,0.03305,0.99936,138.37,#2.3,0.91491,-0.40282,0.025878,179.2,0.40342,0.91468,-0.024714,113.09,-0.013715,0.03305,0.99936,138.37
> ui mousemode right "translate selected models"
> view matrix models
> #2.1,0.91491,-0.40282,0.025878,183.36,0.40342,0.91468,-0.024714,115.24,-0.013715,0.03305,0.99936,137.97,#2.2,0.91491,-0.40282,0.025878,183.36,0.40342,0.91468,-0.024714,115.24,-0.013715,0.03305,0.99936,137.97,#2.3,0.91491,-0.40282,0.025878,183.36,0.40342,0.91468,-0.024714,115.24,-0.013715,0.03305,0.99936,137.97
> select clear
Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
got 3 atomic models, 1 maps.
[Repeated 1 time(s)]
> color bychain
> hide #!2.1 models
> show #!2.1 models
> hide #!2.1 models
> show #!2.1 models
> open /Users/nik/Downloads/6pd6.pdb
6pd6.pdb title:
Crystal structure of A H5N1 influenza virus hemagglutinin At pH 7.0 [more
info...]
Chain information for 6pd6.pdb #3
---
Chain | Description | UniProt
A | hemagglutinin | Q1KHJ8_9INFA 11-1042
Non-standard residues in 6pd6.pdb #3
---
GOL — glycerol (glycerin; propane-1,2,3-triol)
NAG — 2-acetamido-2-deoxy-β-D-glucopyranose (N-acetyl-β-D-glucosamine;
2-acetamido-2-deoxy-β-D-glucose; 2-acetamido-2-deoxy-D-glucose;
2-acetamido-2-deoxy-glucose; N-acetyl-D-glucosamine)
SO4 — sulfate ion
Drag select of 389 atoms, 491 residues, 1 pseudobonds, 343 bonds
> close #3
Drag select of 1 cryosparc_P26_J49_005_volume_map_sharp.mrc , 1167 atoms, 1473
residues, 3 pseudobonds, 1021 bonds
> select subtract #1
12198 atoms, 1021 bonds, 3 pseudobonds, 1542 residues, 6 models selected
> select clear
> hide #!1 models
Drag select of 1167 atoms, 1473 residues, 3 pseudobonds, 1021 bonds
> save /Users/nik/projects/HA/HA5.pdb
> close #2
> open /Users/nik/projects/HA/HA5.pdb
HA5.pdb title:
Crystal structure of A H5N1 influenza virus hemagglutinin At pH 7.0 [more
info...]
Chain information for HA5.pdb
---
Chain | Description
2.1/A | No description available
2.2/A 2.3/A | No description available
> help help:user
> combine #2.1 #2.2 #2.3
Remapping chain ID 'A' in HA5.pdb #2.2 to 'B'
Remapping chain ID 'A' in HA5.pdb #2.3 to 'C'
> combine #2.1 #2.2 #2.3 name H5_HA
Remapping chain ID 'A' in HA5.pdb #2.2 to 'B'
Remapping chain ID 'A' in HA5.pdb #2.3 to 'C'
> close #3
> close #2
> show #!1 models
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J49_005_volume_map_sharp.mrc (#1)
using 12381 atoms
average map value = 0.09313, steps = 76
shifted from previous position = 1.91
rotated from previous position = 2.37 degrees
atoms outside contour = 9428, contour level = 0.22988
Position of H5_HA (#4) relative to cryosparc_P26_J49_005_volume_map_sharp.mrc
(#1) coordinates:
Matrix rotation and translation
0.99915284 -0.03627709 0.01943136 3.29188642
0.03619620 0.99933458 0.00449851 -5.60764221
-0.01958162 -0.00379135 0.99980107 1.56510087
Axis -0.10021213 0.47160928 0.87609487
Axis point 135.56195022 83.14810167 0.00000000
Rotation angle (degrees) 2.37051853
Shift along axis -1.60332621
> volume #1 level 0.1423
> surface dust #1 size 9.4
> select add #4
12381 atoms, 12415 bonds, 3 pseudobonds, 1725 residues, 2 models selected
> ui mousemode right "rotate selected models"
> view matrix models
> #4,0.75616,-0.64787,0.092076,98.236,0.64906,0.76046,0.020492,-50.169,-0.083296,0.044268,0.99554,3.6568
> view matrix models
> #4,0.75565,-0.65497,0.0022531,110.88,0.65297,0.75361,0.075508,-56.947,-0.051153,-0.055587,0.99714,12.048
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J49_005_volume_map_sharp.mrc (#1)
using 12381 atoms
average map value = 0.07334, steps = 140
shifted from previous position = 2.25
rotated from previous position = 4.31 degrees
atoms outside contour = 9113, contour level = 0.14228
Position of H5_HA (#4) relative to cryosparc_P26_J49_005_volume_map_sharp.mrc
(#1) coordinates:
Matrix rotation and translation
0.72376794 -0.68763475 -0.05760562 124.13156922
0.68996859 0.71993364 0.07509261 -57.88279917
-0.01016406 -0.09409570 0.99551127 11.70133281
Axis -0.12182651 -0.03416099 0.99196337
Axis point 135.10265650 125.97462353 0.00000000
Rotation angle (degrees) 43.97800403
Shift along axis -1.53788886
> select clear
Drag select of 1 cryosparc_P26_J49_005_volume_map_sharp.mrc , 1167 atoms, 1021
bonds, 1473 residues, 3 pseudobonds
> select subtract #1
12198 atoms, 1021 bonds, 3 pseudobonds, 1542 residues, 2 models selected
> select add #4
12381 atoms, 12415 bonds, 3 pseudobonds, 1725 residues, 2 models selected
> select subtract #4
Nothing selected
> select add #4
12381 atoms, 12415 bonds, 3 pseudobonds, 1725 residues, 2 models selected
> view matrix models
> #4,-0.61903,-0.78414,-0.043891,291.64,0.76749,-0.61585,0.17802,85.13,-0.16662,0.076512,0.98305,10.518
> ui mousemode right "translate selected models"
> view matrix models
> #4,-0.61903,-0.78414,-0.043891,294.53,0.76749,-0.61585,0.17802,87.724,-0.16662,0.076512,0.98305,10.481
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J49_005_volume_map_sharp.mrc (#1)
using 12381 atoms
average map value = 0.08453, steps = 52
shifted from previous position = 1.48
rotated from previous position = 1.12 degrees
atoms outside contour = 8658, contour level = 0.14228
Position of H5_HA (#4) relative to cryosparc_P26_J49_005_volume_map_sharp.mrc
(#1) coordinates:
Matrix rotation and translation
-0.62481710 -0.77963842 -0.04204192 295.55726651
0.76009944 -0.61970049 0.19549972 85.92246603
-0.17847249 0.09019553 0.97980219 10.57901461
Axis -0.06796656 0.08805647 0.99379405
Axis point 127.58249993 113.02998609 0.00000000
Rotation angle (degrees) 129.22428460
Shift along axis -2.00861824
> ui mousemode right "rotate selected models"
> view matrix models
> #4,-0.6785,-0.73022,-0.080166,300.67,0.71228,-0.68064,0.17142,102.25,-0.17974,0.05921,0.98193,14.305
> view matrix models
> #4,-0.67139,-0.73959,-0.047321,296.72,0.74091,-0.6713,-0.020028,122.67,-0.016954,-0.048507,0.99868,6.3704
> ui mousemode right "translate selected models"
> view matrix models
> #4,-0.67139,-0.73959,-0.047321,297.93,0.74091,-0.6713,-0.020028,116.16,-0.016954,-0.048507,0.99868,8.2558
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J49_005_volume_map_sharp.mrc (#1)
using 12381 atoms
average map value = 0.09219, steps = 72
shifted from previous position = 1.21
rotated from previous position = 5.18 degrees
atoms outside contour = 8296, contour level = 0.14228
Position of H5_HA (#4) relative to cryosparc_P26_J49_005_volume_map_sharp.mrc
(#1) coordinates:
Matrix rotation and translation
-0.61319338 -0.78890310 -0.04032094 295.89287559
0.78949191 -0.61034700 -0.06464567 107.62015883
0.02638940 -0.07147335 0.99709335 5.23195078
Axis -0.00432181 -0.04222657 0.99909871
Axis point 121.59222888 126.42683377 0.00000000
Rotation angle (degrees) 127.82295095
Shift along axis -0.59598919
> select clear
> open /Users/nik/Downloads/cryosparc_P26_J64_map.mrc
Opened cryosparc_P26_J64_map.mrc as #2, grid size 256,256,256, pixel 0.94,
shown at level 0.0749, step 1, values float32
> hide #!4 models
> transparency 0
> select add #2
2 models selected
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.58391,-0.81163,-0.017432,288.81,-0.798,0.57778,-0.17135,165.28,0.14915,-0.086142,-0.98506,214.49
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.58391,-0.81163,-0.017432,285.63,-0.798,0.57778,-0.17135,167.12,0.14915,-0.086142,-0.98506,231.36
> select subtract #2
Nothing selected
> transparency 50
> hide #!1 models
> show #!4 models
> fitmap #4 inMap #2
Fit molecule H5_HA (#4) to map cryosparc_P26_J64_map.mrc (#2) using 12381
atoms
average map value = 0.05824, steps = 76
shifted from previous position = 1.62
rotated from previous position = 3.12 degrees
atoms outside contour = 8594, contour level = 0.074892
Position of H5_HA (#4) relative to cryosparc_P26_J64_map.mrc (#2) coordinates:
Matrix rotation and translation
-0.30330372 0.93514920 0.18303778 17.46126002
0.94193719 0.32327847 -0.09080397 -27.13170882
-0.14408743 0.14486891 -0.97890337 239.05821007
Axis 0.58445502 0.81125148 0.01683381
Axis point 33.51936403 0.00000000 118.42896382
Rotation angle (degrees) 168.36843001
Shift along axis -7.78105624
> select add #4
12381 atoms, 12415 bonds, 3 pseudobonds, 1725 residues, 2 models selected
> ui mousemode right "rotate selected models"
> ui mousemode right "translate selected models"
> view matrix models
> #4,-0.58489,-0.81095,-0.016113,286.96,0.81096,-0.58429,-0.030793,91.723,0.015557,-0.031078,0.9994,1.1057
> ui mousemode right "rotate selected models"
> view matrix models
> #4,-0.96989,0.23851,0.049213,193.73,-0.24167,-0.96756,-0.07366,268.75,0.030048,-0.083336,0.99607,6.3089
> view matrix models
> #4,-0.97108,0.23795,0.019345,197.83,-0.23868,-0.96594,-0.099973,271.62,-0.0051031,-0.1017,0.9948,12.9
> ui mousemode right "translate selected models"
> view matrix models
> #4,-0.97108,0.23795,0.019345,199.74,-0.23868,-0.96594,-0.099973,273.03,-0.0051031,-0.1017,0.9948,12.814
> ui mousemode right "rotate selected models"
> view matrix models
> #4,-0.97345,0.21532,0.077646,195.22,-0.20918,-0.97459,0.0801,247.16,0.09292,0.061731,0.99376,-18.876
> ui mousemode right "translate selected models"
> view matrix models
> #4,-0.97345,0.21532,0.077646,197.08,-0.20918,-0.97459,0.0801,252.76,0.09292,0.061731,0.99376,-19.292
> fitmap #4 inMap #2
Fit molecule H5_HA (#4) to map cryosparc_P26_J64_map.mrc (#2) using 12381
atoms
average map value = 0.1205, steps = 88
shifted from previous position = 4.16
rotated from previous position = 1.57 degrees
atoms outside contour = 5491, contour level = 0.074892
Position of H5_HA (#4) relative to cryosparc_P26_J64_map.mrc (#2) coordinates:
Matrix rotation and translation
0.75953188 0.65002148 0.02415345 -51.87127493
0.64939235 -0.75561391 -0.08565740 142.66054288
-0.03742847 0.08074460 -0.99603183 232.53477998
Axis 0.93783177 0.34707204 -0.00354574
Axis point 0.00000000 75.41835483 119.54947349
Rotation angle (degrees) 174.91023664
Shift along axis 0.04244687
> select clear
> close #1
> color bychain
> volume #2 level 0.3537
> volume #2 level 0.04678
> volume #2 color #f4fff480
> open /Users/nik/Downloads/cryosparc_P26_J49_005_volume_map.mrc
Opened cryosparc_P26_J49_005_volume_map.mrc as #1, grid size 256,256,256,
pixel 0.94, shown at level 0.0749, step 1, values float32
> transparency 0
> transparency 50
> hide #!2 models
> select add #1
2 models selected
> select subtract #1
Nothing selected
> show #!2 models
> ui tool show "Fit in Map"
> fitmap #1 inMap #2
Fit map cryosparc_P26_J49_005_volume_map.mrc in map cryosparc_P26_J64_map.mrc
using 167678 points
correlation = 0.5674, correlation about mean = 0.1318, overlap = 3013
steps = 232, shift = 4.58, angle = 39.1 degrees
Position of cryosparc_P26_J49_005_volume_map.mrc (#1) relative to
cryosparc_P26_J64_map.mrc (#2) coordinates:
Matrix rotation and translation
0.03567821 -0.99936165 -0.00183065 238.27582091
-0.99935813 -0.03568387 0.00316071 242.80153401
-0.00322401 0.00171671 -0.99999333 240.81722490
Axis -0.71961040 0.69437583 0.00175630
Axis point 0.00000000 236.44481096 120.61416012
Rotation angle (degrees) 179.94251410
Shift along axis -2.44729430
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> close #1
> open /Users/nik/Downloads/cryosparc_P26_J46_004_volume_map_sharp.mrc
Opened cryosparc_P26_J46_004_volume_map_sharp.mrc as #1, grid size
256,256,256, pixel 0.94, shown at level 0.122, step 1, values float32
> hide #!4 models
> volume #1 level 0.3268
> volume #1 level 0.2164
> show #!2 models
> hide #!2 models
> show #!4 models
> volume #1 level 0.1927
> close #1
> color byhetero
> volume #2 level 0.06318
> volume #2 level 0.103
> open /Users/nik/Downloads/cryosparc_P26_J100_006_volume_map_sharp.mrc
Opened cryosparc_P26_J100_006_volume_map_sharp.mrc as #1, grid size
256,256,256, pixel 0.94, shown at level 0.125, step 1, values float32
> volume #1 level 0.2888
> ui tool show "Fit in Map"
> fitmap #1 inMap #2
Fit map cryosparc_P26_J100_006_volume_map_sharp.mrc in map
cryosparc_P26_J64_map.mrc using 71734 points
correlation = 0.5019, correlation about mean = 0.07331, overlap = 3278
steps = 72, shift = 1.51, angle = 10.1 degrees
Position of cryosparc_P26_J100_006_volume_map_sharp.mrc (#1) relative to
cryosparc_P26_J64_map.mrc (#2) coordinates:
Matrix rotation and translation
-0.43285023 -0.88839337 0.15296372 259.12574892
-0.90143881 0.42787485 -0.06581180 180.61951182
-0.00698256 -0.16637408 -0.98603798 259.72715371
Axis -0.53100066 0.84456692 -0.06888403
Axis point 193.63364288 0.00000000 129.99371557
Rotation angle (degrees) 174.56644777
Shift along axis -2.94173090
> fitmap #1 inMap #2
Fit map cryosparc_P26_J100_006_volume_map_sharp.mrc in map
cryosparc_P26_J64_map.mrc using 71734 points
correlation = 0.5019, correlation about mean = 0.07333, overlap = 3278
steps = 40, shift = 0.0021, angle = 0.014 degrees
Position of cryosparc_P26_J100_006_volume_map_sharp.mrc (#1) relative to
cryosparc_P26_J64_map.mrc (#2) coordinates:
Matrix rotation and translation
-0.43266816 -0.88849029 0.15291586 259.12233246
-0.90152556 0.42771533 -0.06566023 180.63041068
-0.00706598 -0.16626665 -0.98605551 259.72834020
Axis -0.53108571 0.84451938 -0.06881115
Axis point 193.65014280 0.00000000 129.98505538
Rotation angle (degrees) 174.56492893
Shift along axis -2.94249167
> fitmap #1 inMap #2
Fit map cryosparc_P26_J100_006_volume_map_sharp.mrc in map
cryosparc_P26_J64_map.mrc using 71734 points
correlation = 0.5019, correlation about mean = 0.07322, overlap = 3278
steps = 44, shift = 0.0137, angle = 0.00625 degrees
Position of cryosparc_P26_J100_006_volume_map_sharp.mrc (#1) relative to
cryosparc_P26_J64_map.mrc (#2) coordinates:
Matrix rotation and translation
-0.43276495 -0.88844613 0.15289856 259.11886337
-0.90147902 0.42781345 -0.06565997 180.61752342
-0.00707671 -0.16625018 -0.98605821 259.72287379
Axis -0.53104028 0.84454855 -0.06880378
Axis point 193.63659736 0.00000000 129.98149511
Rotation angle (degrees) 174.56534101
Shift along axis -2.93220191
> select add #1
2 models selected
> ui mousemode right "rotate selected models"
> view matrix models
> #1,-0.39079,-0.91367,-0.11179,288.4,-0.9199,0.38334,0.082685,173.26,-0.032695,0.13514,-0.99029,208.69
> ui mousemode right "translate selected models"
> view matrix models
> #1,-0.39079,-0.91367,-0.11179,289.17,-0.9199,0.38334,0.082685,172.06,-0.032695,0.13514,-0.99029,234.61
> fitmap #1 inMap #2
Fit map cryosparc_P26_J100_006_volume_map_sharp.mrc in map
cryosparc_P26_J64_map.mrc using 71734 points
correlation = 0.8392, correlation about mean = 0.4038, overlap = 8613
steps = 256, shift = 9.64, angle = 33.4 degrees
Position of cryosparc_P26_J100_006_volume_map_sharp.mrc (#1) relative to
cryosparc_P26_J64_map.mrc (#2) coordinates:
Matrix rotation and translation
0.73348145 0.67944972 0.01878890 -50.37307447
-0.67949049 0.73366657 -0.00510284 114.12350369
-0.01725191 -0.00902404 0.99981045 5.02479357
Axis -0.00288446 0.02651183 -0.99964434
Axis point 120.44605753 121.39165176 0.00000000
Rotation angle (degrees) 42.82113060
Shift along axis -1.85208490
> select clear
> volume #1 level 0.2077
> transparency #1.1 50
> select clear
> volume #1 level 0.3293
> save /Users/nik/projects/HA/H5_trimer.pdb
> save /Users/nik/projects/HA/J100_2.7.mrc models #1
> volume #1 level 0.2077
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J100_006_volume_map_sharp.mrc
(#1) using 12381 atoms
average map value = 0.21, steps = 204
shifted from previous position = 2.25
rotated from previous position = 3.46 degrees
atoms outside contour = 7434, contour level = 0.20767
Position of H5_HA (#4) relative to cryosparc_P26_J100_006_volume_map_sharp.mrc
(#1) coordinates:
Matrix rotation and translation
0.13483920 0.99004793 0.04029259 -22.17052269
0.98930059 -0.13222867 -0.06164353 22.73357654
-0.05570222 0.04817345 -0.99728461 236.90981513
Axis 0.75288967 0.65812680 -0.00512365
Axis point 0.00000000 15.31231530 118.97772426
Rotation angle (degrees) 175.81768704
Shift along axis -2.94422456
> surface dust #1 size 9.4
> open /Users/nik/Downloads/cryosparc_P26_J90_005_volume_map_sharp.mrc
Opened cryosparc_P26_J90_005_volume_map_sharp.mrc as #3, grid size
256,256,256, pixel 0.94, shown at level 0.152, step 1, values float32
> volume #3 level 0.338
> hide #!4 models
> volume #3 level 0.2266
> close #3
> close #1
> volume #2 level 0.1733
> open /Users/nik/Downloads/cryosparc_P26_J100_006_volume_map.mrc
Opened cryosparc_P26_J100_006_volume_map.mrc as #1, grid size 256,256,256,
pixel 0.94, shown at level 0.0733, step 1, values float32
> volume #1 level 0.04612
> volume #1 level 0.1068
> volume #1 level 0.05031
> open /Users/nik/Downloads/cryosparc_P26_J101_005_volume_map_sharp.mrc
Opened cryosparc_P26_J101_005_volume_map_sharp.mrc as #3, grid size
256,256,256, pixel 0.94, shown at level 0.117, step 1, values float32
> volume #3 level 0.265
> show #!4 models
> select add #3
2 models selected
> ui mousemode right "rotate selected models"
> view matrix models
> #3,0.6561,0.46332,0.59571,-77.902,0.50484,-0.85619,0.10989,142.86,0.56096,0.22864,-0.79564,103.21
> ui mousemode right "translate selected models"
> view matrix models
> #3,0.6561,0.46332,0.59571,-105.85,0.50484,-0.85619,0.10989,225.92,0.56096,0.22864,-0.79564,113.61
> volume #3 level 0.2576
> select clear
> select add #1
2 models selected
> ui mousemode right "rotate selected models"
> view matrix models
> #1,-0.25962,-0.74622,0.61299,176.42,-0.93151,0.36093,0.04486,185.48,-0.25473,-0.55937,-0.78881,293.31
> ui mousemode right "translate selected models"
> view matrix models
> #1,-0.25962,-0.74622,0.61299,163.1,-0.93151,0.36093,0.04486,184.79,-0.25473,-0.55937,-0.78881,318.03
> select subtract #1
Nothing selected
> select add #3
2 models selected
> view matrix models
> #3,0.6561,0.46332,0.59571,-101.71,0.50484,-0.85619,0.10989,152.24,0.56096,0.22864,-0.79564,115.71
> select clear
> ui tool show "Fit in Map"
> fitmap #1 inMap #2
Fit map cryosparc_P26_J100_006_volume_map.mrc in map cryosparc_P26_J64_map.mrc
using 215874 points
correlation = 0.8461, correlation about mean = 0.6161, overlap = 5554
steps = 336, shift = 7.24, angle = 51.2 degrees
Position of cryosparc_P26_J100_006_volume_map.mrc (#1) relative to
cryosparc_P26_J64_map.mrc (#2) coordinates:
Matrix rotation and translation
0.73411054 0.67879810 0.01774376 -50.20693866
-0.67883290 0.73427639 -0.00490509 114.00418333
-0.01635839 -0.00844417 0.99983053 4.99824469
Axis -0.00260598 0.02511086 -0.99968128
Axis point 120.57236433 121.20110278 0.00000000
Rotation angle (degrees) 42.76804085
Shift along axis -2.00307068
> fitmap #3 inMap #2
Fit map cryosparc_P26_J101_005_volume_map_sharp.mrc in map
cryosparc_P26_J64_map.mrc using 73978 points
correlation = 0.7926, correlation about mean = 0.3102, overlap = 6985
steps = 300, shift = 13.2, angle = 40.5 degrees
Position of cryosparc_P26_J101_005_volume_map_sharp.mrc (#3) relative to
cryosparc_P26_J64_map.mrc (#2) coordinates:
Matrix rotation and translation
-0.94699004 0.32100178 -0.01295088 197.94131109
-0.32088310 -0.94706124 -0.01044285 271.59216178
-0.01561745 -0.00573355 0.99986160 5.60751341
Axis 0.00733640 0.00415413 -0.99996446
Axis point 121.37731626 119.49126328 0.00000000
Rotation angle (degrees) 161.27938085
Shift along axis -3.02690667
> transparency #1.1#3.1 50
> volume #3 level 0.2942
> volume #1 level 0.04142
> volume #1 level 0.2547
> open /Users/nik/Downloads/cryosparc_P26_J103_005_volume_map_sharp.mrc
Opened cryosparc_P26_J103_005_volume_map_sharp.mrc as #5, grid size
256,256,256, pixel 0.94, shown at level 0.138, step 1, values float32
> volume #5 level 0.2535
> fitmap #5 inMap #2
Fit map cryosparc_P26_J103_005_volume_map_sharp.mrc in map
cryosparc_P26_J64_map.mrc using 90486 points
correlation = 0.4242, correlation about mean = 0.07076, overlap = 3421
steps = 112, shift = 8.54, angle = 2.22 degrees
Position of cryosparc_P26_J103_005_volume_map_sharp.mrc (#5) relative to
cryosparc_P26_J64_map.mrc (#2) coordinates:
Matrix rotation and translation
-0.60847529 -0.78321937 0.12777026 268.23976579
-0.79337042 0.60401969 -0.07565436 147.35786549
-0.01792179 -0.14740296 -0.98891414 267.55318749
Axis -0.44093885 0.89536647 -0.06238442
Axis point 176.48806173 0.00000000 132.83692089
Rotation angle (degrees) 175.33332065
Shift along axis -3.02918970
> fitmap #5 inMap #1
Fit map cryosparc_P26_J103_005_volume_map_sharp.mrc in map
cryosparc_P26_J100_006_volume_map.mrc using 90486 points
correlation = 0.4615, correlation about mean = 0.07055, overlap = 3519
steps = 84, shift = 1.62, angle = 3.3 degrees
Position of cryosparc_P26_J103_005_volume_map_sharp.mrc (#5) relative to
cryosparc_P26_J100_006_volume_map.mrc (#1) coordinates:
Matrix rotation and translation
0.13774517 -0.97302007 0.18508978 197.37380695
-0.99046561 -0.13570314 0.02371813 246.86933069
0.00203904 -0.18659212 -0.98243536 268.12740306
Axis -0.75282729 0.65524904 -0.06244812
Axis point 0.00000000 221.81821265 114.26089446
Rotation angle (degrees) 171.97065440
Shift along axis -3.57154898
> fitmap #5 inMap #1
Fit map cryosparc_P26_J103_005_volume_map_sharp.mrc in map
cryosparc_P26_J100_006_volume_map.mrc using 90486 points
correlation = 0.4615, correlation about mean = 0.07059, overlap = 3520
steps = 40, shift = 0.0104, angle = 0.00981 degrees
Position of cryosparc_P26_J103_005_volume_map_sharp.mrc (#5) relative to
cryosparc_P26_J100_006_volume_map.mrc (#1) coordinates:
Matrix rotation and translation
0.13761243 -0.97302841 0.18514466 197.38787683
-0.99048385 -0.13559016 0.02360215 246.86356455
0.00213823 -0.18663074 -0.98242781 268.12141805
Axis -0.75278388 0.65529369 -0.06250294
Axis point 0.00000000 221.82875490 114.25261040
Rotation angle (degrees) 171.97316136
Shift along axis -3.58065301
> select add #5
2 models selected
> ui mousemode right "rotate selected models"
> view matrix models
> #5,0.61544,-0.77731,0.13048,125.1,0.76467,0.62898,0.14024,-66.375,-0.19108,0.013465,0.98148,14.378
> fitmap #5 inMap #1
Fit map cryosparc_P26_J103_005_volume_map_sharp.mrc in map
cryosparc_P26_J100_006_volume_map.mrc using 90486 points
correlation = 0.8776, correlation about mean = 0.546, overlap = 1.148e+04
steps = 116, shift = 6.36, angle = 7.62 degrees
Position of cryosparc_P26_J103_005_volume_map_sharp.mrc (#5) relative to
cryosparc_P26_J100_006_volume_map.mrc (#1) coordinates:
Matrix rotation and translation
-0.75687107 -0.65333096 0.01745984 287.48428206
-0.65344782 0.75697036 -0.00135014 106.53672102
-0.01233449 -0.01243097 -0.99984666 252.72198893
Axis -0.34858138 0.93727131 -0.00367610
Axis point 164.62468113 0.00000000 125.35295984
Rotation angle (degrees) 179.08929195
Shift along axis -1.28688627
> transparency sel 50
> select clear
> volume #5 level 0.1951
> surface dust #5 size 9.4
> hide #!4 models
> volume #5 level 0.4654
> show #!4 models
> volume #5 level 0.2097
> volume #5 level 0.2682
> open /Users/nik/Downloads/cryosparc_P26_J115_class_00_final_volume.mrc
Opened cryosparc_P26_J115_class_00_final_volume.mrc as #6, grid size
256,256,256, pixel 0.94, shown at level 0.0703, step 1, values float32
> hide #!4 models
> hide #!6 models
> show #!6 models
> hide #!1 models
> volume #6 level 0.05175
> volume #6 level 0.122
> volume #6 level 0.04297
> show #!4 models
> hide #!6 models
> show #!1 models
> open /Users/nik/Downloads/cryosparc_P26_J122_005_volume_map_sharp.mrc
Opened cryosparc_P26_J122_005_volume_map_sharp.mrc as #7, grid size
256,256,256, pixel 0.94, shown at level 0.121, step 1, values float32
> volume #7 level 0.2223
> hide #!4 models
> volume #7 level 0.4581
> volume #7 level 0.2156
> open /Users/nik/Downloads/cryosparc_P26_J124_cluster_014.mrc
Opened cryosparc_P26_J124_cluster_014.mrc as #8, grid size 256,256,256, pixel
0.94, shown at level 0.546, step 1, values float32
> volume #8 level 0.9111
> volume #8 level 1.017
> close #8
> show #!4 models
> open /Users/nik/projects/HA/H5_J100_emready.mrc
Opened H5_J100_emready.mrc as #8, grid size 480,480,480, pixel 0.5, shown at
level 0.384, step 2, values float32
> select add #8
2 models selected
> view matrix models
> #8,-0.36658,0.92798,-0.066848,62.267,0.92334,0.35404,-0.14863,-18.006,-0.11426,-0.11621,-0.98663,251.2
> ui mousemode right "translate selected models"
> view matrix models
> #8,-0.36658,0.92798,-0.066848,61.886,0.92334,0.35404,-0.14863,-13.977,-0.11426,-0.11621,-0.98663,269.42
> ui mousemode right "rotate selected models"
> view matrix models
> #8,-0.91132,0.40669,-0.06395,190.88,0.41155,0.90402,-0.11563,-21.597,0.010786,-0.1317,-0.99123,256.56
> ui mousemode right "translate selected models"
> view matrix models
> #8,-0.91132,0.40669,-0.06395,184.27,0.41155,0.90402,-0.11563,-25.527,0.010786,-0.1317,-0.99123,257.78
> fitmap #8 inMap #1
Fit map H5_J100_emready.mrc in map cryosparc_P26_J100_006_volume_map.mrc using
137986 points
correlation = 0.6935, correlation about mean = 0.3403, overlap = 4.278e+04
steps = 76, shift = 5.98, angle = 3.11 degrees
Position of H5_J100_emready.mrc (#8) relative to
cryosparc_P26_J100_006_volume_map.mrc (#1) coordinates:
Matrix rotation and translation
-0.50639414 -0.86191137 -0.02595711 286.45091083
0.86187850 -0.50685945 0.01609192 73.70045093
-0.02702642 -0.01422302 0.99953353 5.06968633
Axis -0.01758349 0.00062023 0.99984521
Axis point 122.18590082 118.79661664 0.00000000
Rotation angle (degrees) 120.45490299
Shift along axis 0.07780477
> select clear
> hide #!4 models
> volume #8 level 1.616
> volume #8 level 0.7948
> toolshed show
Downloading bundle ChimeraX_clix-0.1.9-py3-none-any.whl
Installed ChimeraX-clix (0.1.9)
> ui windowfill toggle
[Repeated 1 time(s)]
> ui tool show clix
Window position QRect(1630,922 274x58) outside any known screen, using primary
screen
> open file_names
'file_names' has no suffix
> open /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters.zip
Unrecognized file suffix '.zip'
> open
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_019.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_018.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_017.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_016.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_015.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_014.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_013.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_012.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_011.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_010.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_009.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_008.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_007.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_006.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_005.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_004.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_003.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_002.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_001.mrc
> /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/J124_cluster_000.mrc
Opened J124_cluster_019.mrc as #9.1, grid size 256,256,256, pixel 0.94, shown
at level 0.282, step 1, values float32
Opened J124_cluster_018.mrc as #9.2, grid size 256,256,256, pixel 0.94, shown
at level 0.285, step 1, values float32
Opened J124_cluster_017.mrc as #9.3, grid size 256,256,256, pixel 0.94, shown
at level 0.222, step 1, values float32
Opened J124_cluster_016.mrc as #9.4, grid size 256,256,256, pixel 0.94, shown
at level 0.146, step 1, values float32
Opened J124_cluster_015.mrc as #9.5, grid size 256,256,256, pixel 0.94, shown
at level 0.192, step 1, values float32
Opened J124_cluster_014.mrc as #9.6, grid size 256,256,256, pixel 0.94, shown
at level 0.546, step 1, values float32
Opened J124_cluster_013.mrc as #9.7, grid size 256,256,256, pixel 0.94, shown
at level 0.575, step 1, values float32
Opened J124_cluster_012.mrc as #9.8, grid size 256,256,256, pixel 0.94, shown
at level 0.522, step 1, values float32
Opened J124_cluster_011.mrc as #9.9, grid size 256,256,256, pixel 0.94, shown
at level 0.156, step 1, values float32
Opened J124_cluster_010.mrc as #9.10, grid size 256,256,256, pixel 0.94, shown
at level 0.634, step 1, values float32
Opened J124_cluster_009.mrc as #9.11, grid size 256,256,256, pixel 0.94, shown
at level 0.162, step 1, values float32
Opened J124_cluster_008.mrc as #9.12, grid size 256,256,256, pixel 0.94, shown
at level 0.479, step 1, values float32
Opened J124_cluster_007.mrc as #9.13, grid size 256,256,256, pixel 0.94, shown
at level 0.562, step 1, values float32
Opened J124_cluster_006.mrc as #9.14, grid size 256,256,256, pixel 0.94, shown
at level 0.268, step 1, values float32
Opened J124_cluster_005.mrc as #9.15, grid size 256,256,256, pixel 0.94, shown
at level 0.256, step 1, values float32
Opened J124_cluster_004.mrc as #9.16, grid size 256,256,256, pixel 0.94, shown
at level 0.217, step 1, values float32
Opened J124_cluster_003.mrc as #9.17, grid size 256,256,256, pixel 0.94, shown
at level 0.261, step 1, values float32
Opened J124_cluster_002.mrc as #9.18, grid size 256,256,256, pixel 0.94, shown
at level 0.328, step 1, values float32
Opened J124_cluster_001.mrc as #9.19, grid size 256,256,256, pixel 0.94, shown
at level 0.234, step 1, values float32
Opened J124_cluster_000.mrc as #9.20, grid size 256,256,256, pixel 0.94, shown
at level 0.212, step 1, values float32
FYI: command is replacing existing command: "vseries align"
FYI: command is replacing existing command: "vseries save"
FYI: command is replacing existing command: "vseries measure"
FYI: command is replacing existing command: "vseries play"
FYI: command is replacing existing command: "vseries stop"
FYI: command is replacing existing command: "vseries slider"
>
Incomplete command: vseries
> close #9
> open /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/*.mrc
> format vseries true
Invalid "format" argument: Should be one of 'aln', 'amber', 'amira', 'apbs',
'bild', 'brix', 'ccd', 'ccp4', 'cellpack', 'clustal', 'cmap', 'cmd', 'cod',
'collada', 'compiled python', 'corecif', 'cube', 'dcd', 'defattr', 'delphi',
'dicom', 'dock', 'dsn6', 'dv', 'emanhdf', 'fasta', 'fsc', 'gltf', 'gopenmol',
'gro', 'hdf', 'hssp', 'html', 'ihm', 'images', 'imagic', 'imod', 'imodmap',
'ims', 'iupac', 'macmolplt', 'markers', 'mmcif', 'mmtf', 'mol2', 'mole',
'mrc', 'msf', 'mtz', 'netcdfmap', 'nifti', 'nmrstar', 'nrrd', 'obj', 'pae',
'pcod', 'pdb', 'pdbqt', 'pfam', 'photo', 'pif', 'pir', 'positions', 'priism',
'profec', 'pseudobonds', 'psf', 'python', 'rsf', 'schrodinger maestro', 'sdf',
'segger', 'session', 'sff', 'situs', 'smallcif', 'smiles', 'spider', 'stl',
'stockholm', 'storm', 'swc', 'swissdock', 'tom_em', 'trr', 'uhbd', 'uniprot',
'viperdb', 'vtk', 'web fetch', 'xplor', 'xtc', or 'zdock'
> open /Users/nik/Downloads/cryosparc_P26_J124_volumes_all_clusters/*.mrc
> format mrc vseries true
Opened map series J124_cluster_000.mrc as #9, 20 images, grid size
256,256,256, pixel 0.94, shown at level 0.212, step 1, values float32
> volume #9.1 level 0.2176
> surface dust #9.1 size 9.4
> surface dust #9.2 size 9.4
> surface dust #9.3 size 9.4
> surface dust #9.4 size 9.4
> surface dust #9.5 size 9.4
Color zone shortcut requires 1 displayed atomic model and 1 map, got 0 atomic
models, 1 maps.
> surface dust #9.6 size 9.4
> surface dust #9.7 size 9.4
> surface dust #9.8 size 9.4
[Repeated 1 time(s)]
> volume #9.8 level 0.3762
> surface dust #9.9 size 9.4
> surface dust #9.11 size 9.4
> volume #9.11 level 0.4729
> volume #9.12 level 0.1787
> surface dust #9.12 size 9.4
> volume #9.13 level 0.5274
> surface dust #9.13 size 9.4
> volume #9.13 level 0.4206
> surface dust #9.14 size 9.4
> surface dust #9.15 size 9.4
> volume #9.16 level 0.2816
> surface dust #9.16 size 9.4
> volume #9.17 level 0.1761
> surface dust #9.17 size 9.4
> volume #9.18 level 0.19
> surface dust #9.18 size 9.4
> volume #9.19 level 0.2886
> surface dust #9.19 size 9.4
> surface dust #9.20 size 9.4
> volume #9.14 level 0.4938
> volume #9.14 level 0.3238
> surface dust #9.14 size 9.4
[Repeated 1 time(s)]
> volume #9.14 level 0.4
> open /Users/nik/Downloads/cryosparc_P26_J123_component_0.mrc
Opened cryosparc_P26_J123_component_0.mrc as #10, grid size 256,256,256, pixel
0.94, shown at level 0.000783, step 1, values float32
> volume #10 level 0.0007614
> open /Users/nik/Downloads/cryosparc_P26_J123_component_1.mrc
Opened cryosparc_P26_J123_component_1.mrc as #11, grid size 256,256,256, pixel
0.94, shown at level 0.000623, step 1, values float32
> open /Users/nik/Downloads/cryosparc_P26_J123_component_2.mrc
Opened cryosparc_P26_J123_component_2.mrc as #12, grid size 256,256,256, pixel
0.94, shown at level 0.000613, step 1, values float32
> close #10
> close #12
> close #11
> open /Users/nik/Downloads/cryosparc_P26_J103_005_volume_map_sharp.mrc
Opened cryosparc_P26_J103_005_volume_map_sharp.mrc as #10, grid size
256,256,256, pixel 0.94, shown at level 0.138, step 1, values float32
> volume #10 level 0.2322
> volume #10 level 0.5826
> volume #10 level 0.2512
> open /Users/nik/Downloads/cryosparc_P26_J40_005_volume_map.mrc
Opened cryosparc_P26_J40_005_volume_map.mrc as #11, grid size 256,256,256,
pixel 0.94, shown at level 0.0701, step 1, values float32
> open /Users/nik/Downloads/J41_viewing_direction_distribution.bild.bild
Opened BILD data containing 3017 objects
> volume #11 color #65e715
> volume #11 color #21e711
> open
> /Users/nik/Downloads/J118_viewing_direction_distribution_iteration_005.bild.bild
Opened BILD data containing 3072 objects
> close #12
> open /Users/nik/Downloads/cryosparc_P26_J118_005_volume_map.mrc
Opened cryosparc_P26_J118_005_volume_map.mrc as #12, grid size 256,256,256,
pixel 0.94, shown at level 0.0714, step 1, values float32
> open
> /Users/nik/Downloads/J122_viewing_direction_distribution_iteration_005.bild.bild
Opened BILD data containing 3072 objects
> hide #13 models
> show #!7 models
> hide #!9 models
> hide #!7 models
> hide #14 models
> open /Users/nik/Downloads/cryosparc_P26_J139_004_volume_map_sharp.mrc
Opened cryosparc_P26_J139_004_volume_map_sharp.mrc as #15, grid size
256,256,256, pixel 0.94, shown at level 0.105, step 1, values float32
> volume #15 level 0.1545
> surface dust #15 size 9.4
> volume #15 level 0.2652
> volume #15 level 0.1324
> open /Users/nik/Downloads/cryosparc_P26_J130_006_volume_map_sharp.mrc
Opened cryosparc_P26_J130_006_volume_map_sharp.mrc as #16, grid size
256,256,256, pixel 0.94, shown at level 0.153, step 1, values float32
> volume #16 level 0.2916
> show #!4 models
> select add #16
2 models selected
> ui mousemode right "rotate selected models"
> view matrix models
> #16,0.98653,0.15954,0.036151,-21.826,0.15956,-0.98719,0.002287,216.9,0.036053,0.0035122,-0.99934,242.39
> view matrix models
> #16,0.98654,0.16335,0.0068976,-18.664,0.16327,-0.98652,0.0111,215.28,0.0086178,-0.0098245,-0.99991,247.35
> view matrix models
> #16,0.96119,-0.26569,0.074368,27.083,-0.2635,-0.96391,-0.038037,270.02,0.08179,0.016964,-0.99651,234.94
> view matrix models
> #16,0.92045,-0.30407,-0.2456,76.104,-0.31258,-0.94988,0.0045461,269,-0.23467,0.072586,-0.96936,263.05
> view matrix models
> #16,0.94255,0.10836,-0.31601,33.088,0.081575,-0.99195,-0.096826,239.1,-0.32396,0.065485,-0.9438,271.48
> ui mousemode right "translate selected models"
> view matrix models
> #16,0.94255,0.10836,-0.31601,36.064,0.081575,-0.99195,-0.096826,238.51,-0.32396,0.065485,-0.9438,271.49
> ui mousemode right "rotate selected models"
> view matrix models
> #16,0.9908,-0.0088715,-0.13502,21.829,-0.02983,-0.98762,-0.15401,258.47,-0.13198,0.15662,-0.9788,241.88
> fitmap #4 inMap #16
Fit molecule H5_HA (#4) to map cryosparc_P26_J130_006_volume_map_sharp.mrc
(#16) using 12381 atoms
average map value = 0.1031, steps = 68
shifted from previous position = 3.73
rotated from previous position = 1.61 degrees
atoms outside contour = 9646, contour level = 0.29158
Position of H5_HA (#4) relative to cryosparc_P26_J130_006_volume_map_sharp.mrc
(#16) coordinates:
Matrix rotation and translation
-0.96777615 0.24922625 -0.03599434 207.31617943
0.24858430 0.96837387 0.02139862 -32.84467375
0.04018908 0.01176145 -0.99912287 236.61122405
Axis -0.12549509 -0.99205902 -0.00835945
Axis point 103.44484515 0.00000000 120.45629628
Rotation angle (degrees) 177.79949485
Shift along axis 4.58875187
> select clear
> volume #16 level 0.2817
> volume #16 level 0.2422
> hide #!4 models
> volume #16 level 0.4297
> volume #16 level 0.5284
> close #16
> close #15
> close #12
> close #11
> close #10
> close #9.14
> close #8
> close #7
> close #6
> close #5
> close #3
> close #1
> close #2
> open /Users/nik/Downloads/cryosparc_P26_J49_005_volume_map_sharp.mrc
Opened cryosparc_P26_J49_005_volume_map_sharp.mrc as #1, grid size
256,256,256, pixel 0.94, shown at level 0.135, step 1, values float32
> close #9.1
> close #13
> close #14
> close #9
> show #!4 models
> volume #1 level 0.1832
> surface dust #1 size 9.4
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J49_005_volume_map_sharp.mrc (#1)
using 12381 atoms
average map value = 0.06996, steps = 80
shifted from previous position = 1.79
rotated from previous position = 3.25 degrees
atoms outside contour = 9725, contour level = 0.18322
Position of H5_HA (#4) relative to cryosparc_P26_J49_005_volume_map_sharp.mrc
(#1) coordinates:
Matrix rotation and translation
-0.96030635 0.26123966 0.09780364 190.92368921
-0.24020838 -0.95269948 0.18618173 240.87571553
0.14181553 0.15529824 0.97763531 -29.36500456
Axis -0.06123760 -0.08726937 -0.99430077
Axis point 111.86906921 109.43673951 0.00000000
Rotation angle (degrees) 165.39456560
Shift along axis -3.51513414
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J49_005_volume_map_sharp.mrc (#1)
using 12381 atoms
average map value = 0.06995, steps = 44
shifted from previous position = 0.0061
rotated from previous position = 0.00884 degrees
atoms outside contour = 9719, contour level = 0.18322
Position of H5_HA (#4) relative to cryosparc_P26_J49_005_volume_map_sharp.mrc
(#1) coordinates:
Matrix rotation and translation
-0.96031761 0.26120704 0.09778017 190.93172985
-0.24015908 -0.95268409 0.18632402 240.85331977
0.14182276 0.15544744 0.97761055 -29.38611672
Axis -0.06123352 -0.08734396 -0.99429447
Axis point 111.86983640 109.42895575 0.00000000
Rotation angle (degrees) 165.39690992
Shift along axis -3.51004993
> transparency 50
> select add #4
12381 atoms, 12415 bonds, 3 pseudobonds, 1725 residues, 2 models selected
> view matrix models
> #4,-0.96669,0.25482,0.024187,202.07,-0.25574,-0.96544,-0.050236,275.1,0.01055,-0.054748,0.99844,9.4566
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J49_005_volume_map_sharp.mrc (#1)
using 12381 atoms
average map value = 0.07229, steps = 80
shifted from previous position = 2.32
rotated from previous position = 1.73 degrees
atoms outside contour = 9539, contour level = 0.18322
Position of H5_HA (#4) relative to cryosparc_P26_J49_005_volume_map_sharp.mrc
(#1) coordinates:
Matrix rotation and translation
-0.96467788 0.25791985 0.05360908 197.17957026
-0.26076436 -0.96381526 -0.05533625 277.71457843
0.03739693 -0.06736099 0.99702756 6.33452351
Axis -0.02316563 0.03123266 -0.99924365
Axis point 116.86834254 125.93289161 0.00000000
Rotation angle (degrees) 164.95732546
Shift along axis -2.22375793
> view matrix models
> #4,-0.96233,0.26601,0.056235,195.56,-0.26732,-0.96345,-0.017184,273.47,0.049609,-0.03157,0.99827,0.29985
> view matrix models
> #4,-0.52898,0.84724,0.048717,73.571,-0.84851,-0.52705,-0.047391,291.82,-0.014475,-0.066406,0.99769,12.233
> close #1
> open /Users/nik/Downloads/cryosparc_P26_J64_map.mrc
Opened cryosparc_P26_J64_map.mrc as #1, grid size 256,256,256, pixel 0.94,
shown at level 0.0749, step 1, values float32
> transparency 50
> view matrix models
> #4,-0.39629,0.90154,0.1737,34.987,0.87258,0.42868,-0.23418,-4.7377,-0.28558,0.058763,-0.95655,283.44
> ui mousemode right "translate selected models"
> view matrix models
> #4,-0.39629,0.90154,0.1737,35.224,0.87258,0.42868,-0.23418,-6.4377,-0.28558,0.058763,-0.95655,270.18
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J64_map.mrc (#1) using 12381
atoms
average map value = 0.1205, steps = 424
shifted from previous position = 11.1
rotated from previous position = 47.4 degrees
atoms outside contour = 5480, contour level = 0.074892
Position of H5_HA (#4) relative to cryosparc_P26_J64_map.mrc (#1) coordinates:
Matrix rotation and translation
-0.94180428 0.33073108 0.06018018 187.05749722
0.32913810 0.94363356 -0.03498288 -33.22926044
-0.06835796 -0.01313944 -0.99757433 247.92730258
Axis 0.16752306 0.98579246 -0.01221697
Axis point 100.45482670 0.00000000 120.64935500
Rotation angle (degrees) 176.26193128
Shift along axis -4.44962985
> select clear
> volume #1 level 0.2297
> hide #!4 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!4 models
> volume #1 level 0.06605
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!4 models
> volume #1 level 0.1722
> set bgColor white
> set bgColor #ffffff00
> volume #1 color #80808080
> volume #1 level 0.0771
> show #!4 models
> save "/Users/nik/Desktop/Yang_Lab/Chimera Sessions/H5_J49.cxs"
——— End of log from Wed Oct 2 13:03:32 2024 ———
opened ChimeraX session
> volume #1 level 0.3184
The cached device pixel ratio value was stale on window expose. Please file a
QTBUG which explains how to reproduce.
> volume #1 level 0.302
> volume #1 level 0.2153
> hide #!4 models
The cached device pixel ratio value was stale on window expose. Please file a
QTBUG which explains how to reproduce.
> open /Users/nik/Downloads/6hjn.pdb1
6hjn.pdb1 title:
Structure of influenza hemagglutinin ectodomain (A/duck/alberta/35/76) [more
info...]
Chain information for 6hjn.pdb1 #2
---
Chain | Description
A C E | No description available
B D F | No description available
Non-standard residues in 6hjn.pdb1 #2
---
BMA — β-D-mannopyranose
FUC — α-L-fucopyranose
MAN — α-D-mannopyranose
NAG — 2-acetamido-2-deoxy-β-D-glucopyranose
UPL — unknown branched fragment of phospholipid (unknown phospholipid
fragment)
> hide #!1 models
> select add #2
12309 atoms, 12639 bonds, 1536 residues, 1 model selected
> show #!1 models
> ui mousemode right "translate selected models"
> view matrix models #2,1,0,0,-168.55,0,1,0,-144.98,0,0,1,-143.85
> color sel bychain
> show sel cartoons
> hide sel atoms
> view matrix models #2,1,0,0,-109.51,0,1,0,-90.357,0,0,1,-143.17
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.085454,-0.98785,-0.12984,497.38,-0.98563,0.064756,0.15602,397.9,-0.14571,0.14131,-0.97918,388.2
> view matrix models
> #2,-0.17741,-0.98413,0.0044243,486.07,-0.98325,0.17744,0.041549,397.08,-0.041675,0.0030212,-0.99913,402.32
> view matrix models
> #2,-0.53763,-0.83845,-0.089194,571.68,-0.8354,0.51533,0.19116,223.6,-0.11431,0.17729,-0.9775,369.18
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.53763,-0.83845,-0.089194,509.77,-0.8354,0.51533,0.19116,167.51,-0.11431,0.17729,-0.9775,359.92
> volume #1 level 0.1478
> volume #1 level 0.04889
> fitmap #2 inMap #1
Fit molecule 6hjn.pdb1 (#2) to map cryosparc_P26_J64_map.mrc (#1) using 12309
atoms
average map value = 0.1175, steps = 256
shifted from previous position = 19.4
rotated from previous position = 16.2 degrees
atoms outside contour = 4483, contour level = 0.048895
Position of 6hjn.pdb1 (#2) relative to cryosparc_P26_J64_map.mrc (#1)
coordinates:
Matrix rotation and translation
-0.64430716 -0.76475567 0.00412860 508.70383383
-0.76441332 0.64383584 -0.03387732 160.81877716
0.02324973 -0.02498336 -0.99941747 374.97634916
Axis 0.42169128 -0.90659417 0.01623175
Axis point 290.66642943 0.00000000 190.31546036
Rotation angle (degrees) 179.39577134
Shift along axis 74.80512698
> select clear
> volume #1 level 0.2153
> volume #1 level 0.1478
> volume #1 level 0.05854
The cached device pixel ratio value was stale on window expose. Please file a
QTBUG which explains how to reproduce.
> open
> /Users/nik/Downloads/fold_2024_10_02_16_27/fold_2024_10_02_16_27_model_4.cif
Chain information for fold_2024_10_02_16_27_model_4.cif #3
---
Chain | Description
A B C | .
> hide #2 models
> select add #3
14157 atoms, 14493 bonds, 1773 residues, 1 model selected
> view matrix models #3,1,0,0,125.85,0,1,0,94.707,0,0,1,36.599
> ui mousemode right "rotate selected models"
> view matrix models
> #3,0.59078,-0.056766,-0.80483,101.42,0.57037,0.73492,0.36684,118.64,0.57066,-0.67578,0.46655,48.477
> view matrix models
> #3,0.69204,0.42297,-0.58496,98.807,0.42259,0.41959,0.80334,131.83,0.58523,-0.80314,0.11163,43.315
> view matrix models
> #3,0.58116,0.55498,-0.59518,93.943,0.32589,0.51145,0.79512,128.06,0.74568,-0.65606,0.11637,43.507
> ui mousemode right "translate selected models"
> view matrix models
> #3,0.58116,0.55498,-0.59518,103.34,0.32589,0.51145,0.79512,130.71,0.74568,-0.65606,0.11637,110.46
> view matrix models
> #3,0.58116,0.55498,-0.59518,114.34,0.32589,0.51145,0.79512,118.91,0.74568,-0.65606,0.11637,110.3
> ui mousemode right "rotate selected models"
> view matrix models
> #3,0.66728,0.47666,-0.57231,117.97,0.29665,0.53473,0.79124,117.83,0.68318,-0.69775,0.21541,112.17
> fitmap #3 inMap #1
Fit molecule fold_2024_10_02_16_27_model_4.cif (#3) to map
cryosparc_P26_J64_map.mrc (#1) using 14157 atoms
average map value = 0.1156, steps = 568
shifted from previous position = 10.3
rotated from previous position = 42.9 degrees
atoms outside contour = 6085, contour level = 0.058543
Position of fold_2024_10_02_16_27_model_4.cif (#3) relative to
cryosparc_P26_J64_map.mrc (#1) coordinates:
Matrix rotation and translation
0.59270219 0.80183177 0.07595997 121.05727214
-0.22934438 0.07761362 0.97024599 118.18370871
0.77207853 -0.59248792 0.22989738 102.16819074
Axis -0.78234132 -0.34849332 -0.51623102
Axis point 0.00000000 35.04045328 -20.74137206
Rotation angle (degrees) 92.85986884
Shift along axis -188.63672807
> select clear
> volume #1 level 0.102
> volume #1 level 0.1912
> open /Users/nik/Downloads/cryosparc_P26_J146_class_00_final_volume.mrc
Opened cryosparc_P26_J146_class_00_final_volume.mrc as #5, grid size
256,256,256, pixel 0.94, shown at level 0.0694, step 1, values float32
> close #1
> hide #3 models
> volume #5 level 0.113
> open /Users/nik/Downloads/cryosparc_P26_J156_005_volume_map_sharp.mrc
Opened cryosparc_P26_J156_005_volume_map_sharp.mrc as #1, grid size
256,256,256, pixel 0.94, shown at level 0.176, step 1, values float32
> volume #1 level 0.28
> volume #1 color #9f9d92
> volume #1 level 0.4884
> volume #1 level 0.3113
> show #!4 models
> select add #4
12381 atoms, 12415 bonds, 3 pseudobonds, 1725 residues, 2 models selected
> view matrix models
> #4,-0.44138,0.89721,0.014351,63.964,-0.89672,-0.44044,-0.043543,283.59,-0.032746,-0.032088,0.99895,-14.164
> ui mousemode right "translate selected models"
> view matrix models
> #4,-0.44138,0.89721,0.014351,61.805,-0.89672,-0.44044,-0.043543,278.27,-0.032746,-0.032088,0.99895,8.8125
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J156_005_volume_map_sharp.mrc
(#1) using 12381 atoms
average map value = 0.0699, steps = 116
shifted from previous position = 1.06
rotated from previous position = 2.42 degrees
atoms outside contour = 10430, contour level = 0.31128
Position of H5_HA (#4) relative to cryosparc_P26_J156_005_volume_map_sharp.mrc
(#1) coordinates:
Matrix rotation and translation
-0.41794559 0.90840661 -0.01090448 60.49608930
-0.90814705 -0.41808701 -0.02172967 275.12256122
-0.02429840 0.00082105 0.99970441 3.37590958
Axis 0.01241272 0.00737249 -0.99989578
Axis point 118.39121932 118.19466579 0.00000000
Rotation angle (degrees) 114.71873317
Shift along axis -0.59629829
> ui mousemode right "rotate selected models"
> view matrix models
> #4,0.25095,0.96781,-0.019253,-24.51,-0.96761,0.25023,-0.033413,200.75,-0.027519,0.027014,0.99926,0.56461
> ui mousemode right "translate selected models"
> view matrix models
> #4,0.25095,0.96781,-0.019253,-26.773,-0.96761,0.25023,-0.033413,206.33,-0.027519,0.027014,0.99926,0.78682
> fitmap #4 inMap #1
Fit molecule H5_HA (#4) to map cryosparc_P26_J156_005_volume_map_sharp.mrc
(#1) using 12381 atoms
average map value = 0.2754, steps = 360
shifted from previous position = 3.02
rotated from previous position = 6.16 degrees
atoms outside contour = 7782, contour level = 0.31128
Position of H5_HA (#4) relative to cryosparc_P26_J156_005_volume_map_sharp.mrc
(#1) coordinates:
Matrix rotation and translation
0.16529592 0.98552559 0.03763743 -23.21088180
-0.98613073 0.16573495 -0.00883815 217.14839939
-0.01494806 -0.03565452 0.99925237 7.64401969
Axis -0.01359484 0.02665878 -0.99955214
Axis point 116.68966767 122.40484498 0.00000000
Rotation angle (degrees) 80.49453813
Shift along axis -1.53613727
> select clear
> volume #1 level 0.3217
> volume #1 level 0.2279
> surface dust #1 size 9.4
> hide #!4 models
> volume #1 level 0.405
> set bgColor black
> lighting flat
> lighting soft
> lighting simple
> graphics silhouettes false
> set bgColor gray
> set bgColor black
> view orient
> view
> ui tool show "Side View"
> volume #!1 step 1
> volume #!1 step 2
> volume #5 level 0.08756
> volume #1 level 0.1463
> volume #1 step 1
> volume #1 level 0.2964
Alignment identifier is 4/A
Alignment identifier is 1
Alignment identifier is 2
Alignment identifier is 3
Alignment identifier is 4
> show #!4 models
> select #3/A-C:1
24 atoms, 21 bonds, 3 residues, 1 model selected
> select #3/A-C:1-3
72 atoms, 69 bonds, 9 residues, 1 model selected
> hide #!1 models
> select #3/A-C:138-139
48 atoms, 45 bonds, 6 residues, 1 model selected
> select #3/A-C:138-148
285 atoms, 288 bonds, 33 residues, 1 model selected
> select #2/B,D,F:2
24 atoms, 21 bonds, 3 residues, 1 model selected
> select #2/B,D,F:2-9
168 atoms, 171 bonds, 24 residues, 1 model selected
> select #2/A,C,E:8
18 atoms, 15 bonds, 3 residues, 1 model selected
> select #2/A,C,E:8-15
180 atoms, 183 bonds, 24 residues, 1 model selected
> select #4/B-C:145-195
844 atoms, 870 bonds, 102 residues, 1 model selected
> select #4/B-C:145-196
862 atoms, 888 bonds, 104 residues, 1 model selected
> select clear
> select #4/A:8-9
15 atoms, 15 bonds, 2 residues, 1 model selected
> select #4/A:9
7 atoms, 7 bonds, 1 residue, 1 model selected
> select #4/A:9-15
50 atoms, 50 bonds, 7 residues, 1 model selected
> select clear
> select #4/A:1033-1039
62 atoms, 61 bonds, 7 residues, 1 model selected
===== Log before crash end =====
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
> remotecontrol rest start port 57995
UCSF ChimeraX version: 1.8 (2024-06-10)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
REST server started on host 127.0.0.1 port 57995
Visit http://127.0.0.1:57995/cmdline.html for CLI interface
> hide #5 models
> hide #4 models
> hide #!3 models
> show #!3 models
> hide #!3 models
> volume #2 level 0.234
> transparency 50
> select clear
> volume #2 level 0.7508
> show #!3 models
> hide #!1 models
OpenGL version: 4.1 Metal - 89.3
OpenGL renderer: Apple M2
OpenGL vendor: Apple
Python: 3.11.4
Locale: en_US.UTF-8
Qt version: PyQt6 6.6.1, Qt 6.6.1
Qt runtime version: 6.6.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: Mac
Model Identifier: Mac14,2
Model Number: MLY33LL/A
Chip: Unknown
Total Number of Cores: 8 (4 performance and 4 efficiency)
Memory: 8 GB
System Firmware Version: 11881.40.128
OS Loader Version: 11881.40.128
Software:
System Software Overview:
System Version: macOS 15.1 (24B5046f)
Kernel Version: Darwin 24.1.0
Time since boot: 16 days, 1 hour, 13 minutes
Graphics/Displays:
Apple M2:
Chipset Model: Apple M2
Type: GPU
Bus: Built-In
Total Number of Cores: 8
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina Display
Resolution: 2560 x 1664 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
LG HDR 4K:
Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition)
UI Looks like: 1920 x 1080 @ 30.00Hz
Mirror: Off
Online: Yes
Installed Packages:
alabaster: 0.7.16
appdirs: 1.4.4
appnope: 0.1.4
asttokens: 2.4.1
Babel: 2.15.0
beautifulsoup4: 4.12.3
blockdiag: 3.0.0
blosc2: 2.0.0
build: 1.2.1
certifi: 2023.11.17
cftime: 1.6.4
charset-normalizer: 3.3.2
ChimeraX-AddCharge: 1.5.17
ChimeraX-AddH: 2.2.6
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.5
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.12.7
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.1.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.57.1
ChimeraX-AtomicLibrary: 14.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.4.6
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.12.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.7
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.4
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-Clipper: 0.23.1
ChimeraX-clix: 0.1.9
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.6
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.8
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.3
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2.4
ChimeraX-DiffPlot: 1.0
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ISOLDE: 1.8
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-Label: 1.1.10
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.1.6
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.3
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.7.1
ChimeraX-MedicalToolbar: 1.0.3
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.14.1
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.17
ChimeraX-ModelPanel: 1.5
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.13.5
ChimeraX-PDB: 2.7.5
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.1
ChimeraX-PubChem: 2.2
ChimeraX-QScore: 1.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.4.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.2
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.0.15
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.11.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.16.5
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.39.1
ChimeraX-uniprot: 2.3
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.4.3
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.4
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.2
contourpy: 1.2.1
cxservices: 1.2.2
cycler: 0.12.1
Cython: 3.0.10
debugpy: 1.8.1
decorator: 5.1.1
docutils: 0.20.1
executing: 2.0.1
filelock: 3.13.4
fonttools: 4.53.0
funcparserlib: 2.0.0a0
glfw: 2.7.0
grako: 3.16.5
h5py: 3.11.0
html2text: 2024.2.26
idna: 3.7
ihm: 1.0
imagecodecs: 2024.1.1
imagesize: 1.4.1
ipykernel: 6.29.2
ipython: 8.21.0
ipywidgets: 8.1.3
jedi: 0.19.1
jinja2: 3.1.4
jupyter-client: 8.6.0
jupyter-core: 5.7.2
jupyterlab-widgets: 3.0.11
kiwisolver: 1.4.5
line-profiler: 4.1.2
lxml: 5.2.1
lz4: 4.3.3
MarkupSafe: 2.1.5
matplotlib: 3.8.4
matplotlib-inline: 0.1.7
msgpack: 1.0.8
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.10.0
numpy: 1.26.4
openvr: 1.26.701
packaging: 23.2
ParmEd: 4.2.2
parso: 0.8.4
pep517: 0.13.1
pexpect: 4.9.0
pillow: 10.3.0
pip: 24.0
pkginfo: 1.10.0
platformdirs: 4.2.2
prompt-toolkit: 3.0.47
psutil: 5.9.8
ptyprocess: 0.7.0
pure-eval: 0.2.2
py-cpuinfo: 9.0.0
pycollada: 0.8
pydicom: 2.4.4
pygments: 2.17.2
pynmrstar: 3.3.4
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.3401
pyparsing: 3.1.2
pyproject-hooks: 1.1.0
PyQt6-commercial: 6.6.1
PyQt6-Qt6: 6.6.3
PyQt6-sip: 13.6.0
PyQt6-WebEngine-commercial: 6.6.0
PyQt6-WebEngine-Qt6: 6.6.3
python-dateutil: 2.9.0.post0
pytz: 2024.1
pyzmq: 26.0.3
qtconsole: 5.5.1
QtPy: 2.4.1
RandomWords: 0.4.0
requests: 2.31.0
scipy: 1.13.0
setuptools: 69.5.1
setuptools-scm: 8.0.4
sfftk-rw: 0.8.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.5
sphinx: 7.2.6
sphinx-autodoc-typehints: 2.0.1
sphinxcontrib-applehelp: 1.0.8
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.6
sphinxcontrib-htmlhelp: 2.0.5
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.7
sphinxcontrib-serializinghtml: 1.1.10
stack-data: 0.6.3
superqt: 0.6.3
tables: 3.8.0
tcia-utils: 1.5.1
tifffile: 2024.1.30
tinyarray: 1.2.4
tornado: 6.4.1
traitlets: 5.14.2
typing-extensions: 4.12.2
tzdata: 2024.1
urllib3: 2.2.1
wcwidth: 0.2.13
webcolors: 1.13
wheel: 0.43.0
wheel-filename: 1.4.1
widgetsnbextension: 4.0.11
Change History (2)
comment:1 by , 13 months ago
| Component: | Unassigned → Window Toolkit |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Crash on Mac waking from sleep |
comment:2 by , 13 months ago
| Resolution: | → duplicate |
|---|---|
| Status: | assigned → closed |
Note:
See TracTickets
for help on using tickets.
Mac Qt 6.6 crash in _NSViewHierarchyDidChangeBackingProperties adding or removing a display or waking from sleep.