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Opened 14 months ago
Closed 14 months ago
#15973 closed defect (can't reproduce)
glDrawBuffer: invalid operation, Linux
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Graphics | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Linux-6.8.0-41-generic-x86_64-with-glibc2.38
ChimeraX Version: 1.9.dev202409110021 (2024-09-11 00:21:38 UTC)
Description
Replace this text with list of actions that caused this problem to occur
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.9.dev202409110021 (2024-09-11)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /home/azinas/Downloads/J309_emready.mrc
Opened J309_emready.mrc as #1, grid size 448,448,448, pixel 1.21, shown at
level 1.41, step 2, values float32
> volume #1 step 1
> volume #1 level 1.968
> open
> /home/azinas/Downloads/helixfold3_result_to_download_20240912164917/job-2Lon2LarA-
> rank5/predicted_structure.cif format mmcif
Summary of feedback from opening
/home/azinas/Downloads/helixfold3_result_to_download_20240912164917/job-2Lon2LarA-
rank5/predicted_structure.cif
---
notes | https://files.wwpdb.org/pub/pdb/refdata/chem_comp/P/ATP/ATP.cif
https://files.wwpdb.org/pub/pdb/refdata/chem_comp/G/MG/MG.cif
Chain information for predicted_structure.cif #2
---
Chain | Description
A B | .
C D E | .
No chain in structure corresponds to chain ID given in local score info (chain
'F')
> select add #2
14549 atoms, 14783 bonds, 1881 residues, 1 model selected
> ui mousemode right "rotate selected models"
> view matrix models
> #2,0.45321,0.70367,0.54722,-7.126,-0.87982,0.45174,0.14779,10.196,-0.1432,-0.54844,0.82384,7.5788
> view matrix models
> #2,0.75229,0.55705,0.3518,-6.2996,-0.63686,0.75162,0.17172,5.4666,-0.16876,-0.35322,0.92019,5.1533
> ui mousemode right "rotate selected models"
> view matrix models
> #2,0.71336,0.58743,0.38216,-6.5528,-0.67978,0.71258,0.17357,6.1224,-0.17036,-0.3836,0.90765,5.5506
> ui mousemode right "translate selected models"
> view matrix models
> #2,0.71336,0.58743,0.38216,210.86,-0.67978,0.71258,0.17357,323.85,-0.17036,-0.3836,0.90765,48.492
> view matrix models
> #2,0.71336,0.58743,0.38216,338.19,-0.67978,0.71258,0.17357,288.05,-0.17036,-0.3836,0.90765,250.39
> view matrix models
> #2,0.71336,0.58743,0.38216,345.7,-0.67978,0.71258,0.17357,285.98,-0.17036,-0.3836,0.90765,262.47
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.38028,0.35525,-0.85393,358.93,0.099959,-0.9021,-0.4198,302.24,-0.91946,-0.245,0.30754,267.24
> view matrix models
> #2,0.016231,-0.94105,-0.33789,369.29,-0.5483,-0.29097,0.78403,294.11,-0.83612,0.17254,-0.5207,265.38
> view matrix models
> #2,-0.038061,-0.92927,-0.36743,369.56,-0.48585,-0.3041,0.81943,293.79,-0.87321,0.2097,-0.43992,264.85
> view matrix models
> #2,0.012467,-0.26747,-0.96348,364.24,-0.35496,-0.90199,0.24581,302.03,-0.9348,0.33894,-0.10619,262.42
> view matrix models
> #2,-0.040958,-0.53192,-0.84581,367.02,-0.15735,-0.83252,0.53118,299.09,-0.98669,0.15485,-0.049601,264.53
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.040958,-0.53192,-0.84581,290.99,-0.15735,-0.83252,0.53118,233.32,-0.98669,0.15485,-0.049601,264.32
> view matrix models
> #2,-0.040958,-0.53192,-0.84581,194.36,-0.15735,-0.83252,0.53118,161.03,-0.98669,0.15485,-0.049601,229.03
> view matrix models
> #2,-0.040958,-0.53192,-0.84581,193.15,-0.15735,-0.83252,0.53118,160.68,-0.98669,0.15485,-0.049601,226.91
> view matrix models
> #2,-0.040958,-0.53192,-0.84581,304.08,-0.15735,-0.83252,0.53118,188.01,-0.98669,0.15485,-0.049601,263.93
> view matrix models
> #2,-0.040958,-0.53192,-0.84581,322.19,-0.15735,-0.83252,0.53118,196.95,-0.98669,0.15485,-0.049601,309.38
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.13553,-0.68959,-0.71141,323.93,-0.073583,-0.70904,0.70131,194.45,-0.98804,0.14739,0.045352,309.09
> view matrix models
> #2,0.33959,-0.85066,-0.40132,322,0.012843,-0.42245,0.9063,189.99,-0.94049,-0.31292,-0.13253,314.69
> ui mousemode right "translate selected models"
> view matrix models
> #2,0.33959,-0.85066,-0.40132,297.55,0.012843,-0.42245,0.9063,200.36,-0.94049,-0.31292,-0.13253,237.94
> view matrix models
> #2,0.33959,-0.85066,-0.40132,290.83,0.012843,-0.42245,0.9063,195.94,-0.94049,-0.31292,-0.13253,253.42
> select /C
657 atoms, 669 bonds, 89 residues, 1 model selected
> select /C/D/E
1971 atoms, 2007 bonds, 267 residues, 1 model selected
> hide sel cartoons
> hide sel atoms
> view matrix models
> #2,0.33959,-0.85066,-0.40132,229.28,0.012843,-0.42245,0.9063,158.91,-0.94049,-0.31292,-0.13253,216.24
> ui mousemode right "translate selected models"
> view matrix models
> #2,0.33959,-0.85066,-0.40132,261.47,0.012843,-0.42245,0.9063,226.41,-0.94049,-0.31292,-0.13253,262.13
> view matrix models
> #2,0.33959,-0.85066,-0.40132,287.99,0.012843,-0.42245,0.9063,237.38,-0.94049,-0.31292,-0.13253,260.69
> view matrix models
> #2,0.33959,-0.85066,-0.40132,288.73,0.012843,-0.42245,0.9063,236.78,-0.94049,-0.31292,-0.13253,256.15
> fitmap #2 inMap #1
Fit molecule predicted_structure.cif (#2) to map J309_emready.mrc (#1) using
14549 atoms
average map value = 2.499, steps = 184
shifted from previous position = 29.4
rotated from previous position = 13.9 degrees
atoms outside contour = 5540, contour level = 1.9681
Position of predicted_structure.cif (#2) relative to J309_emready.mrc (#1)
coordinates:
Matrix rotation and translation
0.32293914 -0.88532417 -0.33453147 275.18385718
0.20401598 -0.28003937 0.93805934 258.86533395
-0.92416864 -0.37118586 0.09018461 269.92439657
Axis -0.72641103 0.32714953 0.60440069
Axis point 0.00000000 295.66548725 144.21217820
Rotation angle (degrees) 115.68720378
Shift along axis 47.93357526
> volume #1 level 2.175
> select /C/D/E
1971 atoms, 2007 bonds, 267 residues, 1 model selected
> show sel cartoons
Computing secondary structure
> select add #2
14549 atoms, 14783 bonds, 1881 residues, 1 model selected
> select subtract #2
Nothing selected
> open
> /home/azinas/Downloads/helixfold3_result_to_download_20240912163934/job-Lon-
> rank5/predicted_structure.cif
Chain information for predicted_structure.cif #3
---
Chain | Description
A B | .
No chain in structure corresponds to chain ID given in local score info (chain
'C')
Computing secondary structure
> open
> /home/azinas/Downloads/helixfold3_result_to_download_20240912163934/job-Lon-
> rank4/predicted_structure.cif
Chain information for predicted_structure.cif #4
---
Chain | Description
A B | .
No chain in structure corresponds to chain ID given in local score info (chain
'C')
Computing secondary structure
> open
> /home/azinas/Downloads/helixfold3_result_to_download_20240912163934/job-Lon-
> rank3/predicted_structure.cif
Chain information for predicted_structure.cif #5
---
Chain | Description
A B | .
No chain in structure corresponds to chain ID given in local score info (chain
'C')
Computing secondary structure
> open
> /home/azinas/Downloads/helixfold3_result_to_download_20240912163934/job-Lon-
> rank2/predicted_structure.cif
Chain information for predicted_structure.cif #6
---
Chain | Description
A B | .
No chain in structure corresponds to chain ID given in local score info (chain
'C')
Computing secondary structure
> open
> /home/azinas/Downloads/helixfold3_result_to_download_20240912163934/job-Lon-
> rank1/predicted_structure.cif
Chain information for predicted_structure.cif #7
---
Chain | Description
A B | .
No chain in structure corresponds to chain ID given in local score info (chain
'C')
Computing secondary structure
> ui tool show Matchmaker
> matchmaker #3-7 to #2
Computing secondary structure
[Repeated 5 time(s)] Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker predicted_structure.cif, chain A (#2) with predicted_structure.cif,
chain B (#3), sequence alignment score = 4022.8
RMSD between 433 pruned atom pairs is 0.847 angstroms; (across all 805 pairs:
39.567)
Matchmaker predicted_structure.cif, chain A (#2) with predicted_structure.cif,
chain A (#4), sequence alignment score = 4046.2
RMSD between 357 pruned atom pairs is 0.955 angstroms; (across all 805 pairs:
51.037)
Matchmaker predicted_structure.cif, chain B (#2) with predicted_structure.cif,
chain A (#5), sequence alignment score = 4035.4
RMSD between 274 pruned atom pairs is 0.660 angstroms; (across all 805 pairs:
69.082)
Matchmaker predicted_structure.cif, chain A (#2) with predicted_structure.cif,
chain A (#6), sequence alignment score = 4034.2
RMSD between 309 pruned atom pairs is 0.849 angstroms; (across all 805 pairs:
68.116)
Matchmaker predicted_structure.cif, chain A (#2) with predicted_structure.cif,
chain A (#7), sequence alignment score = 4021
RMSD between 303 pruned atom pairs is 0.882 angstroms; (across all 805 pairs:
54.940)
> hide #2 models
> hide #!1 models
> show #!1 models
> hide #3 models
> hide #4 models
> hide #5 models
> hide #6 models
> hide #7 models
> select add #7
12545 atoms, 12743 bonds, 1611 residues, 1 model selected
> show #7 models
> fitmap #7 inMap #1
Fit molecule predicted_structure.cif (#7) to map J309_emready.mrc (#1) using
12545 atoms
average map value = 3.212, steps = 172
shifted from previous position = 3.67
rotated from previous position = 25.6 degrees
atoms outside contour = 3146, contour level = 2.1749
Position of predicted_structure.cif (#7) relative to J309_emready.mrc (#1)
coordinates:
Matrix rotation and translation
0.98127012 0.18381123 -0.05764006 275.15230300
-0.17455003 0.97498396 0.13761747 262.15781640
0.08149377 -0.12497884 0.98880688 304.40656596
Axis -0.56405474 -0.29885833 -0.76975707
Axis point 699.39652563 10.06758160 0.00000000
Rotation angle (degrees) 13.46053560
Shift along axis -467.86811443
> select subtract #7
Nothing selected
> select add #6
12545 atoms, 12743 bonds, 1611 residues, 1 model selected
> show #6 models
> hide #7 models
> fitmap #6 inMap #1
Fit molecule predicted_structure.cif (#6) to map J309_emready.mrc (#1) using
12545 atoms
average map value = 3.022, steps = 192
shifted from previous position = 9.37
rotated from previous position = 33.5 degrees
atoms outside contour = 3607, contour level = 2.1749
Position of predicted_structure.cif (#6) relative to J309_emready.mrc (#1)
coordinates:
Matrix rotation and translation
0.85121509 -0.52475551 0.00803236 266.44379598
0.16417327 0.25170901 -0.95377655 256.71476909
0.49847768 0.81318770 0.30040934 308.58684462
Axis 0.90201474 -0.25036664 0.35169015
Axis point 0.00000000 23.54003213 325.39268252
Rotation angle (degrees) 78.36555855
Shift along axis 284.59036738
> undo
> select add #7
25090 atoms, 25486 bonds, 3222 residues, 2 models selected
> select subtract #6
12545 atoms, 12743 bonds, 1611 residues, 1 model selected
> fitmap #7 inMap #1
Fit molecule predicted_structure.cif (#7) to map J309_emready.mrc (#1) using
12545 atoms
average map value = 3.212, steps = 48
shifted from previous position = 0.0236
rotated from previous position = 0.0216 degrees
atoms outside contour = 3147, contour level = 2.1749
Position of predicted_structure.cif (#7) relative to J309_emready.mrc (#1)
coordinates:
Matrix rotation and translation
0.98127334 0.18370912 -0.05791023 275.13771395
-0.17439558 0.97497903 0.13784797 262.17581316
0.08178519 -0.12516725 0.98875899 304.40259423
Axis -0.56470323 -0.29993116 -0.76886381
Axis point 696.64053656 12.07006240 0.00000000
Rotation angle (degrees) 13.46663897
Shift along axis -468.04999057
> hide #6 models
> select subtract #7
Nothing selected
> hide #7 models
> show #6 models
> volume #1 level 3.909
> show #5 models
> hide #6 models
> fitmap #5 inMap #1
Fit molecule predicted_structure.cif (#5) to map J309_emready.mrc (#1) using
12545 atoms
average map value = 3.14, steps = 172
shifted from previous position = 5.07
rotated from previous position = 28.6 degrees
atoms outside contour = 7266, contour level = 3.9088
Position of predicted_structure.cif (#5) relative to J309_emready.mrc (#1)
coordinates:
Matrix rotation and translation
-0.70773687 0.50000433 -0.49910339 286.73343427
0.01130740 -0.69836134 -0.71565605 262.86090388
-0.70638563 -0.51213974 0.48860232 301.23674695
Axis 0.35797868 0.36460284 -0.85960225
Axis point 230.14073626 169.28488370 0.00000000
Rotation angle (degrees) 163.48552364
Shift along axis -60.45949902
> color zone #1 near #5 distance 7.29
> color #5 bypolymer
> color zone #1 near #5 distance 7.29
> hide #5 models
> show #4 models
> fitmap #4 inMap #1
Fit molecule predicted_structure.cif (#4) to map J309_emready.mrc (#1) using
12545 atoms
average map value = 3.112, steps = 224
shifted from previous position = 10.1
rotated from previous position = 25.6 degrees
atoms outside contour = 7720, contour level = 3.9088
Position of predicted_structure.cif (#4) relative to J309_emready.mrc (#1)
coordinates:
Matrix rotation and translation
-0.40637110 0.22966346 -0.88437392 261.70491217
0.50599457 -0.74936512 -0.42710820 272.17982027
-0.76081011 -0.62105283 0.18831186 303.57861683
Axis -0.53948193 -0.34370862 0.76865053
Axis point 221.37170359 219.34530714 0.00000000
Rotation angle (degrees) 169.64475435
Shift along axis -1.38975682
> color zone #1 near #4 distance 7.29
> show #3 models
> hide #4 models
> fitmap #3 inMap #1
Fit molecule predicted_structure.cif (#3) to map J309_emready.mrc (#1) using
12545 atoms
average map value = 2.842, steps = 240
shifted from previous position = 11.8
rotated from previous position = 19.9 degrees
atoms outside contour = 9036, contour level = 3.9088
Position of predicted_structure.cif (#3) relative to J309_emready.mrc (#1)
coordinates:
Matrix rotation and translation
-0.69893060 0.14563391 0.70020481 254.93916372
0.70355099 -0.03589987 0.70973742 264.72780549
0.12849910 0.98868699 -0.07736937 274.99475405
Axis 0.32967794 0.67567324 0.65937707
Axis point 59.94121975 0.00000000 -9.49182840
Rotation angle (degrees) 154.97183356
Shift along axis 444.24254889
> fitmap #3 inMap #1
Fit molecule predicted_structure.cif (#3) to map J309_emready.mrc (#1) using
12545 atoms
average map value = 2.842, steps = 40
shifted from previous position = 0.00463
rotated from previous position = 0.0417 degrees
atoms outside contour = 9036, contour level = 3.9088
Position of predicted_structure.cif (#3) relative to J309_emready.mrc (#1)
coordinates:
Matrix rotation and translation
-0.69943229 0.14548262 0.69973515 254.94051717
0.70309845 -0.03561961 0.71019984 264.72291297
0.12824603 0.98871940 -0.07737510 274.99445750
Axis 0.32935918 0.67580599 0.65940033
Axis point 60.02353997 0.00000000 -9.47973855
Rotation angle (degrees) 154.98722032
Shift along axis 444.19976544
> color zone #1 near #3 distance 7.29
> hide #3 models
> show #2 models
> fitmap #2 inMap #1
Fit molecule predicted_structure.cif (#2) to map J309_emready.mrc (#1) using
14549 atoms
average map value = 2.499, steps = 28
shifted from previous position = 0.0241
rotated from previous position = 0.0151 degrees
atoms outside contour = 11117, contour level = 3.9088
Position of predicted_structure.cif (#2) relative to J309_emready.mrc (#1)
coordinates:
Matrix rotation and translation
0.32303147 -0.88530246 -0.33449978 275.19539272
0.20422689 -0.27991151 0.93805161 258.88622050
-0.92408978 -0.37133406 0.09038234 269.92384870
Axis -0.72640798 0.32708689 0.60443827
Axis point 0.00000000 295.69503462 144.18543482
Rotation angle (degrees) 115.67391875
Shift along axis 47.92646311
> color zone #1 near #2 distance 7.29
> volume #1 level 2.827
> ui mousemode right "rotate selected models"
> select add #2
14549 atoms, 14783 bonds, 1881 residues, 1 model selected
> view matrix models
> #2,-0.22513,-0.31872,-0.92072,274.06,-0.23256,-0.90009,0.36844,270.36,-0.94617,0.29707,0.12851,262.42
> show sel cartoons
> hide sel atoms
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.22513,-0.31872,-0.92072,307.5,-0.23256,-0.90009,0.36844,177.77,-0.94617,0.29707,0.12851,274.74
> select subtract #2
Nothing selected
> select add #2
14549 atoms, 14783 bonds, 1881 residues, 1 model selected
> view matrix models
> #2,-0.22513,-0.31872,-0.92072,344.93,-0.23256,-0.90009,0.36844,237.69,-0.94617,0.29707,0.12851,266.37
> ui mousemode right "rotate selected models"
> view matrix models
> #2,0.14823,-0.3943,-0.90695,343.22,0.626,-0.67255,0.39471,229.65,-0.7656,-0.62626,0.14714,274.61
> view matrix models
> #2,0.32117,-0.34372,-0.88244,341.47,0.46596,-0.75386,0.46323,231.25,-0.82446,-0.55996,-0.081961,275.24
> view matrix models
> #2,0.066925,-0.24244,-0.96786,342.43,0.25106,-0.93473,0.2515,235.37,-0.96566,-0.25982,-0.0016923,272.75
> view matrix models
> #2,0.080947,-0.10661,-0.991,341.04,0.28845,-0.94921,0.12568,235.78,-0.95407,-0.29602,-0.046084,273.23
> view matrix models
> #2,-0.31007,0.4697,-0.82658,337,-0.023994,-0.87302,-0.48708,239.52,-0.95041,-0.1312,0.28197,270.18
> view matrix models
> #2,-0.25875,0.48222,-0.83697,336.58,-0.073302,-0.87378,-0.48077,239.83,-0.96316,-0.063047,0.26144,269.65
> view matrix models
> #2,-0.23579,0.48659,-0.84121,336.4,-0.095081,-0.87302,-0.47833,239.95,-0.96714,-0.032805,0.25212,269.4
> view matrix models
> #2,0.29356,-0.73064,-0.61643,344.55,-0.6258,-0.63434,0.45386,237.17,-0.72264,0.25253,-0.64345,268.51
> view matrix models
> #2,-0.15993,-0.31968,-0.93393,344.57,0.16931,-0.94097,0.2931,235.8,-0.9725,-0.11125,0.20461,270.43
> view matrix models
> #2,-0.23064,0.33779,-0.91253,338.18,-0.0024108,-0.938,-0.34661,239.48,-0.97304,-0.077742,0.21715,270.04
> view matrix models
> #2,0.086536,-0.8519,-0.51651,346.74,-0.26001,-0.51979,0.81376,232.15,-0.96172,0.063877,-0.26648,270.48
> view matrix models
> #2,-0.39418,-0.55326,-0.73384,347.68,0.10505,-0.82038,0.56208,233.88,-0.91301,0.14447,0.3815,266.7
> view matrix models
> #2,-0.17258,-0.62083,-0.76471,347.06,-0.13912,-0.75322,0.64289,234.46,-0.97512,0.21734,0.04362,267.73
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.17258,-0.62083,-0.76471,324.42,-0.13912,-0.75322,0.64289,218.31,-0.97512,0.21734,0.04362,264.42
> view matrix models
> #2,-0.17258,-0.62083,-0.76471,314.78,-0.13912,-0.75322,0.64289,210.85,-0.97512,0.21734,0.04362,264.47
> select subtract #2
Nothing selected
> select add #2
14549 atoms, 14783 bonds, 1881 residues, 1 model selected
> view matrix models
> #2,-0.17258,-0.62083,-0.76471,292.46,-0.13912,-0.75322,0.64289,204.57,-0.97512,0.21734,0.04362,269.66
> select /A
37542 atoms, 38130 bonds, 4830 residues, 6 models selected
> select /B
37542 atoms, 38130 bonds, 4830 residues, 6 models selected
> select ~sel & ##selected
39732 atoms, 40368 bonds, 5106 residues, 6 models selected
> hide sel & #2 atoms
> hide sel & #2 cartoons
> view matrix models
> #2,-0.17258,-0.62083,-0.76471,311.47,-0.13912,-0.75322,0.64289,219.97,-0.97512,0.21734,0.04362,280.25,#3,-0.69943,0.14548,0.69974,273.94,0.7031,-0.03562,0.7102,280.13,0.12825,0.98872,-0.077375,285.58,#4,-0.40637,0.22966,-0.88437,280.71,0.50599,-0.74937,-0.42711,287.58,-0.76081,-0.62105,0.18831,314.16,#5,-0.70774,0.5,-0.4991,305.73,0.011307,-0.69836,-0.71566,278.26,-0.70639,-0.51214,0.4886,311.82,#6,0.85122,-0.52476,0.0080324,285.44,0.16417,0.25171,-0.95378,272.12,0.49848,0.81319,0.30041,319.17,#7,0.98127,0.18371,-0.05791,294.14,-0.1744,0.97498,0.13785,277.58,0.081785,-0.12517,0.98876,314.98
> view matrix models
> #2,-0.17258,-0.62083,-0.76471,272.72,-0.13912,-0.75322,0.64289,232.8,-0.97512,0.21734,0.04362,259.89,#3,-0.69943,0.14548,0.69974,235.19,0.7031,-0.03562,0.7102,292.95,0.12825,0.98872,-0.077375,265.22,#4,-0.40637,0.22966,-0.88437,241.96,0.50599,-0.74937,-0.42711,300.41,-0.76081,-0.62105,0.18831,293.8,#5,-0.70774,0.5,-0.4991,266.99,0.011307,-0.69836,-0.71566,291.09,-0.70639,-0.51214,0.4886,291.46,#6,0.85122,-0.52476,0.0080324,246.7,0.16417,0.25171,-0.95378,284.95,0.49848,0.81319,0.30041,298.81,#7,0.98127,0.18371,-0.05791,255.39,-0.1744,0.97498,0.13785,290.41,0.081785,-0.12517,0.98876,294.62
> view matrix models
> #2,-0.17258,-0.62083,-0.76471,268.93,-0.13912,-0.75322,0.64289,248.12,-0.97512,0.21734,0.04362,263.26,#3,-0.69943,0.14548,0.69974,231.41,0.7031,-0.03562,0.7102,308.27,0.12825,0.98872,-0.077375,268.59,#4,-0.40637,0.22966,-0.88437,238.17,0.50599,-0.74937,-0.42711,315.73,-0.76081,-0.62105,0.18831,297.17,#5,-0.70774,0.5,-0.4991,263.2,0.011307,-0.69836,-0.71566,306.41,-0.70639,-0.51214,0.4886,294.83,#6,0.85122,-0.52476,0.0080324,242.91,0.16417,0.25171,-0.95378,300.26,0.49848,0.81319,0.30041,302.18,#7,0.98127,0.18371,-0.05791,251.6,-0.1744,0.97498,0.13785,305.72,0.081785,-0.12517,0.98876,298
> view matrix models
> #2,-0.17258,-0.62083,-0.76471,257.09,-0.13912,-0.75322,0.64289,261.12,-0.97512,0.21734,0.04362,262.77,#3,-0.69943,0.14548,0.69974,219.57,0.7031,-0.03562,0.7102,321.28,0.12825,0.98872,-0.077375,268.1,#4,-0.40637,0.22966,-0.88437,226.33,0.50599,-0.74937,-0.42711,328.73,-0.76081,-0.62105,0.18831,296.68,#5,-0.70774,0.5,-0.4991,251.36,0.011307,-0.69836,-0.71566,319.41,-0.70639,-0.51214,0.4886,294.34,#6,0.85122,-0.52476,0.0080324,231.07,0.16417,0.25171,-0.95378,313.27,0.49848,0.81319,0.30041,301.69,#7,0.98127,0.18371,-0.05791,239.77,-0.1744,0.97498,0.13785,318.73,0.081785,-0.12517,0.98876,297.51
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.47908,-0.55229,-0.68225,258.44,0.26889,-0.83222,0.48487,259.21,-0.83557,0.048842,0.54721,263.49,#3,-0.5909,0.45003,0.66956,227.24,0.50992,-0.4348,0.74225,307.43,0.62516,0.78001,0.027444,305.38,#4,-0.60412,-0.012541,-0.79679,243.05,0.73657,-0.39041,-0.55232,302.76,-0.30415,-0.92056,0.24509,330.81,#5,-0.89411,0.28036,-0.34924,265.6,0.23784,-0.36351,-0.90072,297.84,-0.37947,-0.8884,0.25834,317.18,#6,0.97177,-0.22793,0.060953,248.44,0.022294,-0.16848,-0.98545,287.19,0.23488,0.95899,-0.15864,326.95,#7,0.94782,0.17723,0.26501,255.59,-0.094056,0.94969,-0.29873,294.74,-0.30462,0.25821,0.91681,323.11
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.47908,-0.55229,-0.68225,256.45,0.26889,-0.83222,0.48487,245.69,-0.83557,0.048842,0.54721,277.29,#3,-0.5909,0.45003,0.66956,225.24,0.50992,-0.4348,0.74225,293.92,0.62516,0.78001,0.027444,319.19,#4,-0.60412,-0.012541,-0.79679,241.05,0.73657,-0.39041,-0.55232,289.25,-0.30415,-0.92056,0.24509,344.62,#5,-0.89411,0.28036,-0.34924,263.61,0.23784,-0.36351,-0.90072,284.33,-0.37947,-0.8884,0.25834,330.99,#6,0.97177,-0.22793,0.060953,246.45,0.022294,-0.16848,-0.98545,273.67,0.23488,0.95899,-0.15864,340.76,#7,0.94782,0.17723,0.26501,253.6,-0.094056,0.94969,-0.29873,281.23,-0.30462,0.25821,0.91681,336.91
> ui mousemode right "translate selected models"
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.2718,-0.021244,-0.96212,249.64,-0.023029,-0.99933,0.028571,249.45,-0.96208,0.029922,0.27113,278.38,#3,-0.92568,0.35188,0.13891,186.97,0.098147,-0.13123,0.98648,272.38,0.36536,0.9268,0.086942,302.91,#4,-0.77536,0.47029,-0.42149,194.38,0.29414,-0.32167,-0.90001,276.7,-0.55884,-0.8218,0.11108,331.97,#5,-0.72394,0.68043,0.11368,219.05,-0.281,-0.14036,-0.94939,285.02,-0.63003,-0.71925,0.29281,325.57,#6,0.69361,-0.38213,0.61064,207.98,0.54355,-0.27864,-0.79178,266.61,0.47271,0.8811,0.014439,332.06,#7,0.89729,-0.43173,0.092063,210.9,0.4404,0.88982,-0.11948,276.89,-0.030336,0.14775,0.98856,329.1
> volume #1 level 3.686
> view matrix models
> #2,-0.28815,0.06053,-0.95567,248.91,-0.02204,-0.99815,-0.056575,249.44,-0.95733,0.0047608,0.28895,278.6,#3,-0.92313,0.37977,0.060095,185.08,0.013462,-0.12428,0.99216,266.59,0.38426,0.91669,0.10961,304.83,#4,-0.80765,0.47838,-0.34476,192.7,0.2432,-0.26239,-0.93381,270.8,-0.53717,-0.83804,0.095579,333.85,#5,-0.71116,0.67511,0.19616,216.48,-0.32395,-0.067047,-0.94369,281.26,-0.62394,-0.73467,0.26638,327.23,#6,0.65649,-0.34062,0.67305,207.07,0.58685,-0.32997,-0.73941,261.86,0.47394,0.8804,-0.016729,333.44,#7,0.85781,-0.49949,0.12114,209.09,0.51277,0.8478,-0.13526,272.41,-0.035139,0.17814,0.98338,330.69
> view matrix models
> #2,-0.25095,-0.18619,-0.94993,251.19,-0.024836,-0.97977,0.1986,249.23,-0.96768,0.073431,0.24124,277.98,#3,-0.90458,0.30528,0.29757,192.64,0.26576,-0.14197,0.95353,283.27,0.33334,0.94162,0.047291,299.61,#4,-0.70401,0.4286,-0.56628,200.03,0.38955,-0.43365,-0.81252,287.72,-0.59381,-0.79262,0.13833,328.66,#5,-0.7465,0.66346,-0.050625,225.87,-0.18902,-0.28439,-0.93989,291.57,-0.63797,-0.69206,0.3377,322.63,#6,0.76325,-0.44182,0.47143,211.78,0.44506,-0.16941,-0.87933,275.56,0.46837,0.88096,0.06734,329.6,#7,0.95802,-0.28238,0.049661,216.42,0.28576,0.95453,-0.084913,285.06,-0.023425,0.095539,0.99515,326.27
> view matrix models
> #2,-0.24466,-0.19203,-0.9504,251.21,-0.024958,-0.97862,0.20416,249.22,-0.96929,0.07367,0.23464,277.98,#3,-0.9053,0.29825,0.30247,192.7,0.27121,-0.14218,0.95196,283.61,0.32693,0.94384,0.047827,299.18,#4,-0.69792,0.43146,-0.57162,199.93,0.39248,-0.43721,-0.8092,288.06,-0.59906,-0.78911,0.1358,328.27,#5,-0.74328,0.66646,-0.058003,225.82,-0.18592,-0.28908,-0.93908,291.76,-0.64263,-0.68721,0.33878,322.41,#6,0.76255,-0.44857,0.46615,211.6,0.44161,-0.16563,-0.88179,275.84,0.47275,0.87827,0.07179,329.3,#7,0.9597,-0.27778,0.042602,216.31,0.28048,0.95621,-0.083647,285.31,-0.0175,0.092225,0.99558,325.99
> hide #2 models
> show #2 models
> select add #1
39732 atoms, 40368 bonds, 5106 residues, 8 models selected
> select subtract #1
39732 atoms, 40368 bonds, 5106 residues, 6 models selected
> select add #2
45989 atoms, 46723 bonds, 5911 residues, 6 models selected
> select subtract #2
31440 atoms, 31940 bonds, 4030 residues, 5 models selected
> select add #3
37697 atoms, 38295 bonds, 4835 residues, 5 models selected
> select add #4
43954 atoms, 44650 bonds, 5640 residues, 5 models selected
> select subtract #4
31409 atoms, 31907 bonds, 4029 residues, 4 models selected
> select subtract #3
18864 atoms, 19164 bonds, 2418 residues, 3 models selected
> select add #5
25121 atoms, 25519 bonds, 3223 residues, 3 models selected
> select add #6
31378 atoms, 31874 bonds, 4028 residues, 3 models selected
> select subtract #5
18833 atoms, 19131 bonds, 2417 residues, 2 models selected
> select subtract #6
6288 atoms, 6388 bonds, 806 residues, 1 model selected
> select add #7
12545 atoms, 12743 bonds, 1611 residues, 1 model selected
> select subtract #7
Nothing selected
> select add #7
12545 atoms, 12743 bonds, 1611 residues, 1 model selected
> select subtract #7
Nothing selected
> volume #1 level 2.509
> select add #2
14549 atoms, 14783 bonds, 1881 residues, 1 model selected
> view matrix models
> #2,-0.67174,0.72688,0.14287,244.48,-0.3019,-0.092507,-0.94884,242.16,-0.67647,-0.68051,0.28159,283.75
> view matrix models
> #2,0.39047,-0.61822,-0.68216,251.26,0.0098078,-0.73815,0.67457,246.45,-0.92056,-0.27009,-0.28216,281.27
> view matrix models
> #2,-0.16294,-0.08624,-0.98286,249.57,0.58382,-0.81148,-0.025585,243.43,-0.79536,-0.57798,0.18257,283.52
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.16294,-0.08624,-0.98286,281.97,0.58382,-0.81148,-0.025585,250.58,-0.79536,-0.57798,0.18257,260.03
> view matrix models
> #2,-0.16294,-0.08624,-0.98286,274.78,0.58382,-0.81148,-0.025585,243.24,-0.79536,-0.57798,0.18257,263.85
> view matrix models
> #2,-0.16294,-0.08624,-0.98286,278.36,0.58382,-0.81148,-0.025585,244.47,-0.79536,-0.57798,0.18257,263.91
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.075539,0.065856,-0.99497,276.21,0.013098,-0.99766,-0.067029,250.24,-0.99706,-0.018095,0.0745,259.54
> view matrix models
> #2,-0.34288,0.93915,0.020821,268.88,-0.46858,-0.15178,-0.87028,244.91,-0.81416,-0.30816,0.49211,261.22
> view matrix models
> #2,-0.29224,0.86821,0.40101,269.21,-0.5683,0.1796,-0.80298,242.17,-0.76918,-0.46255,0.44092,262.51
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.29224,0.86821,0.40101,289.74,-0.5683,0.1796,-0.80298,254.89,-0.76918,-0.46255,0.44092,271.19
> view matrix models
> #2,-0.29224,0.86821,0.40101,288.24,-0.5683,0.1796,-0.80298,260.67,-0.76918,-0.46255,0.44092,266.92
> view matrix models
> #2,-0.29224,0.86821,0.40101,301.85,-0.5683,0.1796,-0.80298,270.88,-0.76918,-0.46255,0.44092,257.46
> view matrix models
> #2,-0.29224,0.86821,0.40101,316,-0.5683,0.1796,-0.80298,266.59,-0.76918,-0.46255,0.44092,265.92
> view matrix models
> #2,-0.29224,0.86821,0.40101,314.15,-0.5683,0.1796,-0.80298,261.81,-0.76918,-0.46255,0.44092,260.62
An error occurred in drawing the scene. Redrawing graphics is now stopped to
avoid a continuous stream of error messages. To restart graphics use the
command "graphics restart" after changing the settings that caused the error.
GLError(
err = 1282,
description = b'invalid operation',
baseOperation = glDrawBuffer,
cArguments = (GL_BACK,)
)
Traceback (most recent call last):
File "/app/lib/python3.11/site-packages/chimerax/core/updateloop.py", line 84,
in draw_new_frame
view.draw(check_for_changes = False)
File "/app/lib/python3.11/site-packages/chimerax/graphics/view.py", line 188,
in draw
self._draw_scene(camera, drawings)
File "/app/lib/python3.11/site-packages/chimerax/graphics/view.py", line 273,
in _draw_scene
draw_highlight_outline(r, highlight_drawings, color = self._highlight_color,
File "/app/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line
1625, in draw_highlight_outline
r.outline.finish_rendering_outline(color=color, pixel_width=pixel_width)
File "/app/lib/python3.11/site-packages/chimerax/graphics/opengl.py", line
2007, in finish_rendering_outline
r.pop_framebuffer()
File "/app/lib/python3.11/site-packages/chimerax/graphics/opengl.py", line
776, in pop_framebuffer
fb.activate()
File "/app/lib/python3.11/site-packages/chimerax/graphics/opengl.py", line
2400, in activate
GL.glDrawBuffer(self._draw_buffer)
File "src/errorchecker.pyx", line 58, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
OpenGL.error.GLError: GLError(
err = 1282,
description = b'invalid operation',
baseOperation = glDrawBuffer,
cArguments = (GL_BACK,)
)
OpenGL version: 3.3.0 NVIDIA 535.183.01
OpenGL renderer: NVIDIA GeForce RTX 4090/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Python: 3.11.4
Locale: en_US.UTF-8
Qt version: PyQt6 6.7.1, Qt 6.7.1
Qt runtime version: 6.7.2
Qt platform: xcb
XDG_SESSION_TYPE=x11
DESKTOP_SESSION=ubuntu
XDG_SESSION_DESKTOP=ubuntu
XDG_CURRENT_DESKTOP=ubuntu:GNOME
DISPLAY=:0
Manufacturer: Micro-Star International Co., Ltd.
Model: MS-7D67
OS: Freedesktop SDK 23.08
Architecture: 64bit ELF
Virtual Machine: detection failed
CPU: 32 AMD Ryzen 9 7950X 16-Core Processor
Cache Size: 1024 KB
Memory:
total used free shared buff/cache available
Mem: 124Gi 13Gi 52Gi 267Mi 60Gi 111Gi
Swap: 9Gi 768Ki 9Gi
Graphics:
01:00.0 VGA compatible controller [0300]: NVIDIA Corporation AD102 [GeForce RTX 4090] [10de:2684] (rev a1)
Subsystem: NVIDIA Corporation Device [10de:16f3]
Kernel driver in use: nvidia
Installed Packages:
alabaster: 1.0.0
appdirs: 1.4.4
asttokens: 2.4.1
autocommand: 2.2.2
babel: 2.16.0
backports.tarfile: 1.2.0
beautifulsoup4: 4.12.3
biopython: 1.84
blockdiag: 3.0.0
blosc2: 2.7.1
build: 1.2.1
certifi: 2024.8.30
cftime: 1.6.4
charset-normalizer: 3.3.2
ChimeraX-AddCharge: 1.5.17
ChimeraX-AddH: 2.2.6
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.5
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.14
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.1.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.58.7
ChimeraX-AtomicLibrary: 14.1.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.4.7
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.13
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.3.4
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.4
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.3
ChimeraX-Clipper: 0.23.0
ChimeraX-clix: 0.1.8
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.6
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.9.dev202409110021
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.4
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-DeepMutationalScan: 1.0
ChimeraX-Dicom: 1.2.4
ChimeraX-DiffPlot: 1.0
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-Foldseek: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.3
ChimeraX-ISOLDE: 1.8.dev0
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-Label: 1.1.11
ChimeraX-LinuxSupport: 1.0.1
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.6
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.7.1
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.14.2
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.17
ChimeraX-ModelPanel: 1.5
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.13.5
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.6
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.2
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.5
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.2.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.13
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.0
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.18.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Tempy: 0.6.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.40.1
ChimeraX-uniprot: 2.3.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.4.4
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.4
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.2
contourpy: 1.3.0
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.0.10
debugpy: 1.8.5
decorator: 5.1.1
distro: 1.9.0
docutils: 0.21.2
executing: 2.1.0
filelock: 3.15.4
fonttools: 4.53.1
funcparserlib: 2.0.0a0
glfw: 2.7.0
grako: 3.16.5
h5py: 3.11.0
html2text: 2024.2.26
idna: 3.8
ihm: 1.3
imagecodecs: 2024.6.1
imagesize: 1.4.1
importlib_metadata: 8.0.0
importlib_resources: 6.4.0
inflect: 7.3.1
ipykernel: 6.29.5
ipython: 8.26.0
ipywidgets: 8.1.5
jaraco.context: 5.3.0
jaraco.functools: 4.0.1
jaraco.text: 3.12.1
jedi: 0.19.1
Jinja2: 3.1.4
jupyter_client: 8.6.2
jupyter_core: 5.7.2
jupyterlab_widgets: 3.0.13
kiwisolver: 1.4.7
line_profiler: 4.1.3
lxml: 5.2.2
lz4: 4.3.3
MarkupSafe: 2.1.5
matplotlib: 3.9.2
matplotlib-inline: 0.1.7
more-itertools: 10.3.0
msgpack: 1.0.8
ndindex: 1.8
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.10.1
numpy: 1.26.4
openvr: 1.26.701
ordered-set: 4.1.0
packaging: 23.2
packaging: 24.1
ParmEd: 4.2.2
parso: 0.8.4
pep517: 0.13.1
pexpect: 4.9.0
pillow: 10.4.0
pip: 24.2
pkginfo: 1.11.1
platformdirs: 4.3.2
platformdirs: 4.2.2
prompt_toolkit: 3.0.47
psutil: 6.0.0
ptyprocess: 0.7.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pycollada: 0.8
pydicom: 2.4.4
Pygments: 2.18.0
pynmrstar: 3.3.4
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.3401
pyparsing: 3.1.4
pyproject_hooks: 1.1.0
PyQt6: 6.7.1
PyQt6-Qt6: 6.7.2
PyQt6-WebEngine: 6.7.0
PyQt6-WebEngine-Qt6: 6.7.2
PyQt6-WebEngineSubwheel-Qt6: 6.7.2
PyQt6_sip: 13.8.0
python-dateutil: 2.9.0.post0
pytz: 2024.2
pyzmq: 26.2.0
qtconsole: 5.5.2
QtPy: 2.4.1
qtshim: 1.0
RandomWords: 0.4.0
requests: 2.32.3
scipy: 1.14.0
setuptools: 72.1.0
sfftk-rw: 0.8.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.6
Sphinx: 8.0.2
sphinx-autodoc-typehints: 2.2.3
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
stack-data: 0.6.3
superqt: 0.6.3
tables: 3.10.1
tcia_utils: 1.5.1
tifffile: 2024.7.24
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.4.1
traitlets: 5.14.3
typeguard: 4.3.0
typing_extensions: 4.12.2
typing_extensions: 4.12.2
tzdata: 2024.1
urllib3: 2.2.2
wcwidth: 0.2.13
webcolors: 24.6.0
wheel: 0.43.0
wheel: 0.43.0
wheel-filename: 1.4.1
widgetsnbextension: 4.0.13
zipp: 3.19.2
Change History (2)
comment:1 by , 14 months ago
| Component: | Unassigned → Graphics |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → glDrawBuffer: invalid operation |
comment:2 by , 14 months ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | assigned → closed |
| Summary: | glDrawBuffer: invalid operation → glDrawBuffer: invalid operation, Linux |
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This OpenGL error has been reported dozens of times always on Linux. I suspect it is something about how Linux handles multiple displays or sleep.