Opened 7 years ago

Closed 7 years ago

#1583 closed defect (duplicate)

Updating 3D label triggers: KeyError: 'setting changed'

Reported by: chimerax-bug-report@… Owned by: Eric Pettersen
Priority: normal Milestone:
Component: Graphics Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Linux-4.15.0-42-generic-x86_64-with-debian-buster-sid
ChimeraX Version: 0.8 (2018-11-22)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 0.8 (2018-11-22)  
How to cite UCSF ChimeraX  

> open epitope-template-chimerax-5-prM13-final.cxs

opened ChimeraX session  

> save session /net/kuhn/home/dsirohi/emfit-prM12-700-1280/work_devika/colres-
Fabstiched-colage1-P123-collage/chimera-hand2/emfit12/epitope-template-
chimerax-5-prM13-final1.cxs

Session file format is not finalized, and thus might not be restorable in
other versions of ChimeraX.  

> color #1,2,3/B:3,7-10,25-29,71@ca lime green target a

> color #1,2,3/B:3,7-10,25-29,71@ca green target a

> color #1,2,3/B:3,7-10,25-29,71@ca lime green target a

> save /net/kuhn/home/dsirohi/Desktop/image36.png supersample 3

> save /net/kuhn/home/dsirohi/Desktop/prM13-final1.tiff width 40
transparentBackground true supersample 3

Invalid "width" argument: Expected an integer  

> save /net/kuhn/home/dsirohi/Desktop/prM13-final1.tiff width 100
transparentBackground true supersample 3

> save /net/kuhn/home/dsirohi/Desktop/prM13-final1.png width 100
transparentBackground true supersample 3

> save /net/kuhn/home/dsirohi/Desktop/prM13-final1.png width 1000
transparentBackground true supersample 3

> save /net/kuhn/home/dsirohi/Desktop/prM13-final1.png width 5000
transparentBackground true supersample 3

> save /net/kuhn/home/dsirohi/Desktop/prM13-final2-1000.png width 1000
transparentBackground true supersample 3

> save /net/kuhn/home/dsirohi/Desktop/prM13-final2-5000.png width 5000
transparentBackground true supersample 3

> save /net/kuhn/home/dsirohi/Desktop/prM13-final2-10000.png width 10000
transparentBackground true supersample 3

> save /net/kuhn/home/dsirohi/Desktop/prM13-final2-20000.png width 20000
transparentBackground true supersample 3

> save session /net/kuhn/home/dsirohi/emfit-prM12-700-1280/work_devika/colres-
Fabstiched-colage1-P123-collage/chimera-hand2/emfit12/epitope-template-
chimerax-5-prM13-final2.cxs

Session file format is not finalized, and thus might not be restorable in
other versions of ChimeraX.  

> save session /net/kuhn/home/dsirohi/emfit-prM12-700-1280/work_devika/colres-
Fabstiched-colage1-P123-collage/chimera-hand2/emfit12/epitope-template-
chimerax-5-prM13-final2-labeltest.cxs

Session file format is not finalized, and thus might not be restorable in
other versions of ChimeraX.  

Expected a keyword  

> size C atomRadius 1

Changed 6891 atom radii  

> size C atomRadius 1.7

Changed 6891 atom radii  

> size C atomRadius 1.5

Changed 6891 atom radii  

> size C atomRadius 1.2

Changed 6891 atom radii  

> size C atomRadius 1.0

Changed 6891 atom radii  

> label #1,2,3/B:3,7-10,25-29,71 residues

> label #1,2,3/B:3,7-10,25-29,71 residues size 10

Unknown command: ~label #1,2,3/B:3,7-10,25-29,71 residues size 10  

Missing or invalid "atoms" argument: invalid atoms specifier  

Expected a keyword  

> label delete #1,2,3/B:3,7-10,25-29,71 residues

Traceback (most recent call last):  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/cmd_line/tool.py", line 229, in execute  
cmd.run(cmd_text)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/core/commands/cli.py", line 2581, in run  
result = ci.function(session, **kw_args)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/label/label3d.py", line 139, in label_delete  
delete_count += lm.delete_labels(lbl_objects)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/label/label3d.py", line 319, in delete_labels  
self.session.models.close([self])  
File "/apps/chimerax/0.8/lib/python3.6/site-packages/chimerax/core/models.py",
line 561, in close  
m.delete()  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/label/label3d.py", line 269, in delete  
self.session.triggers.remove_handler(h)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/core/triggerset.py", line 376, in remove_handler  
self._triggers[handler._name].delete(handler)  
KeyError: 'setting changed'  
  
KeyError: 'setting changed'  
  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/core/triggerset.py", line 376, in remove_handler  
self._triggers[handler._name].delete(handler)  
  
See log for complete Python traceback.  
  

> label delete #1,2,3/B:3,7-10,25-29,71 residues

Traceback (most recent call last):  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/cmd_line/tool.py", line 229, in execute  
cmd.run(cmd_text)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/core/commands/cli.py", line 2581, in run  
result = ci.function(session, **kw_args)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/label/label3d.py", line 139, in label_delete  
delete_count += lm.delete_labels(lbl_objects)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/label/label3d.py", line 319, in delete_labels  
self.session.models.close([self])  
File "/apps/chimerax/0.8/lib/python3.6/site-packages/chimerax/core/models.py",
line 561, in close  
m.delete()  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/label/label3d.py", line 269, in delete  
self.session.triggers.remove_handler(h)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/core/triggerset.py", line 376, in remove_handler  
self._triggers[handler._name].delete(handler)  
KeyError: 'setting changed'  
  
KeyError: 'setting changed'  
  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/core/triggerset.py", line 376, in remove_handler  
self._triggers[handler._name].delete(handler)  
  
See log for complete Python traceback.  
  

> label delete #1,2,3/B:3,7-10,25-29,71 residues

Traceback (most recent call last):  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/cmd_line/tool.py", line 229, in execute  
cmd.run(cmd_text)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/core/commands/cli.py", line 2581, in run  
result = ci.function(session, **kw_args)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/label/label3d.py", line 139, in label_delete  
delete_count += lm.delete_labels(lbl_objects)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/label/label3d.py", line 319, in delete_labels  
self.session.models.close([self])  
File "/apps/chimerax/0.8/lib/python3.6/site-packages/chimerax/core/models.py",
line 561, in close  
m.delete()  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/label/label3d.py", line 269, in delete  
self.session.triggers.remove_handler(h)  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/core/triggerset.py", line 376, in remove_handler  
self._triggers[handler._name].delete(handler)  
KeyError: 'setting changed'  
  
KeyError: 'setting changed'  
  
File "/apps/chimerax/0.8/lib/python3.6/site-
packages/chimerax/core/triggerset.py", line 376, in remove_handler  
self._triggers[handler._name].delete(handler)  
  
See log for complete Python traceback.  
  

> label #1,2,3/B:3,7-10,25-29,71@ca residues

> label #1,2,3/B:3,7-10,25-29,71@ca residues size 8

> label #1,2,3/B:3,7-10,25-29,71@ca residues size 6

> label #1,2,3/B:3,7-10,25-29,71@ca residues size 10

> label #1,2,3/B:3,7-10,25-29,71@ca residues size 8

> label #1,2,3/B:3,7-10,25-29,71@ca residues size 7




OpenGL version: 3.3.0 NVIDIA 390.77
OpenGL renderer: GeForce GTX 1080 Ti/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Change History (2)

comment:1 by Eric Pettersen, 7 years ago

Component: Unassigned → Graphics
Owner: set to Eric Pettersen
Platform: → all
Project: → ChimeraX
Status: new → accepted
Summary: ChimeraX bug report submission → Updating 3D label triggers: KeyError: 'setting changed'

comment:2 by Eric Pettersen, 7 years ago

Resolution: → duplicate
Status: accepted → closed

Fixed 5 days after the date of the version in the bug report.

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