Restore new session in old ChimeraX

[chkaiser@…]

The following bug report has been submitted:
Platform:        macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC)
Description
Opened a ChimeraX-session from collaborator

Log:
UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open
> /Users/christoph/ownCloud/BiochSoc/FromFloAndBettina/Segmentation_Fig3/L1G1W_ts003_chimeraX.cxs

Opened L1G1W_ts003_AD.mrc as #2, grid size 510,720,122, pixel 17.1,17.1,17.1,
shown at level 0.34, step 1, values float32  
Log from Mon Jul 15 13:21:12 2024UCSF ChimeraX version: 1.8 (2024-06-10)  
© 2016-2024 Regents of the University of California. All rights reserved.  

> open
> /mnt/beegfs/schurgrp/bzens/ECMpaper_deposition/segmentation/DONE_crosssection_L1g1w_TS003/session.cxs

Opened dust_final.mrc as #2, grid size 510,720,122, pixel 17.1,17.1,17.1,
shown at level 0.0272, step 2, values float32  
Opened L1g1w_TS003_bin8_correct_trimmed.mrc as #3, grid size 510,720,121,
pixel 17.1, shown at level 0.347, step 2, values float32  
Log from Mon Jul 10 09:55:33 2023UCSF ChimeraX version: 1.6.1 (2023-05-09)  
© 2016-2023 Regents of the University of California. All rights reserved.  

> open
> /Volumes/jhansen/group/schurgrp/jhansen/Betty_segmentation/June2023/DONE_crosssection_L1g1w_TS003/session.cxs

Opened dust_final.mrc as #2, grid size 510,720,122, pixel 17.1,17.1,17.1,
shown at level 0.0272, step 2, values float32  
Opened L1g1w_TS003_bin8_correct_trimmed_inverted_resampled.mrc as #3, grid
size 510,720,122, pixel 17.1,17.1,17.1, shown at level 1.51, step 2, values
float32  
Log from Thu Jul 6 16:49:37 2023UCSF ChimeraX version: 1.6.1 (2023-05-09)  
© 2016-2023 Regents of the University of California. All rights reserved.  

> open
> /Volumes/jhansen/group/schurgrp/jhansen/Betty_segmentation/June2023/DONE_crosssection_L1g1w_TS003/session.cxs

Opened dust_final.mrc as #2, grid size 510,720,122, pixel 17.1,17.1,17.1,
shown at level 0.0272, step 2, values float32  
Opened L1g1w_TS003_bin8_correct_trimmed_inverted_resampled.mrc as #3, grid
size 510,720,122, pixel 17.1,17.1,17.1, shown at level 1.51, step 2, values
float32  
Log from Fri Jun 16 12:24:18 2023UCSF ChimeraX version: 1.7.dev202306022041
(2023-06-02)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /Users/jessehansen/Desktop/Betty_temp/L1G1W_ts003_COLLAGEN.stl

Opened STL file L1G1W_ts003_COLLAGEN.stl containing 493765 triangles  

> open
> /Users/jessehansen/Desktop/Betty_temp/uncropped/L1g1w_TS003_collagen_smoothened_rescaled.stl

Opened STL file L1g1w_TS003_collagen_smoothened_rescaled.stl containing 618868
triangles  

> select add #2

1 model selected  

> ui mousemode right "translate selected models"

> view matrix models #2,1,0,0,-34.624,0,1,0,28.301,0,0,1,-1156.9

> view matrix models #2,1,0,0,-43.845,0,1,0,12.388,0,0,1,-1124.3

> view matrix models #2,1,0,0,-38.143,0,1,0,22.733,0,0,1,-1123.6

> hide #1 models

> show #1 models

> hide #2 models

> show #2 models

> hide #2 models

> show #2 models

> hide #2 models

> show #2 models

> hide #2 models

> show #2 models

> hide #2 models

> show #2 models

> hide #2 models

> show #2 models

> save #2 /Users/jessehansen/Desktop/Betty_temp/collagen2.stl format stl

Expected a models specifier or a keyword  

> save /Users/jessehansen/Desktop/Betty_temp/collagen2.stl format stl models
> #2

> hide #2 models

> show #2 models

> hide #2 models

> show #2 models

> hide #1 models

> show #1 models

> hide #1 models

> show #1 models

> hide #1 models

> close session

> open
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/L1G1W_ts003_ACTIN.stl
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/dust_final.mrc
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/L1g1w_TS003_bin8_correct_trimmed_inverted_resampled.mrc
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/L1G1W_ts003_IM.stl
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/L1G1W_ts003_MT.stl
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/L1G1W_ts003_PM.stl
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/L1G1W_ts003_smallECM.stl
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/L1G1W_ts003_vesicles.stl
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/collagen2.stl

Opened dust_final.mrc as #2, grid size 510,720,122, pixel 17.1,17.1,17.1,
shown at level 0.0272, step 2, values float32  
Opened L1g1w_TS003_bin8_correct_trimmed_inverted_resampled.mrc as #3, grid
size 510,720,122, pixel 17.1,17.1,17.1, shown at level 1.51, step 2, values
float32  
Opened STL file L1G1W_ts003_ACTIN.stl containing 708725 triangles  
Opened STL file L1G1W_ts003_IM.stl containing 1984827 triangles  
Opened STL file L1G1W_ts003_MT.stl containing 100944 triangles  
Opened STL file L1G1W_ts003_PM.stl containing 1106736 triangles  
Opened STL file L1G1W_ts003_smallECM.stl containing 268223 triangles  
Opened STL file L1G1W_ts003_vesicles.stl containing 647742 triangles  
Opened STL file collagen2.stl containing 618868 triangles  

> set bgColor white

> lighting soft

> select add #9

1 model selected  

> color #9 yellow

> view matrix models #9,1,0,0,2.5086,0,1,0,-15.416,0,0,1,3.0223

> close #9

> open
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/collagen2.stl

Opened STL file collagen2.stl containing 509011 triangles  

> hide #!2 models

> show #!2 models

> lighting depthCueStart 1 depthCueEnd 1

> volume #2 showOutlineBox true outlineBoxRgb grey

> lighting soft

> select clear

> select add #6

1 model selected  

> ui tool show "Color Actions"

> color sel cornflower blue

> select clear

> select add #8

1 model selected  

> color sel sky blue

> select clear

> select add #9

1 model selected  

> color sel medium sea green

> select clear

> select add #4

1 model selected  

> color sel #DC5A9B

> select clear

> select add #1

1 model selected  

> color sel #00F0F0

> select clear

> select add #5

1 model selected  

> color sel dark orange

> select clear

> color sel peach puff

> transparency #2 80

> select clear

> transparency #2 70

> select add #7

1 model selected  

> color sel yellow

> select clear

> hide #!3 models

> graphics silhouettes true

> movie record

> turn y 2 180

> wait 180

> movie encode /Users/jessehansen/Desktop/movie1.mp4

Movie saved to /Users/jessehansen/Desktop/movie1.mp4  
  

> save
> /Users/jessehansen/Desktop/Betty_temp/crosssection_L1g1w_TS003/session.cxs

——— End of log from Fri Jun 16 12:24:18 2023 ———

opened ChimeraX session  

> open
> /Volumes/jhansen/group/schurgrp/jhansen/Betty_segmentation/June2023/DONE_crosssection_L1g1w_TS003/L1g1w_TS003_granules_smoothened.stl

Opened STL file L1g1w_TS003_granules_smoothened.stl containing 604428
triangles  

> select #10

1 model selected  

> color sel #8fb38d

> select clear

> save /Users/jhansen/Desktop/session.cxs

——— End of log from Thu Jul 6 16:49:37 2023 ———

opened ChimeraX session  

> view orient

> close #3

> open
> /Volumes/jhansen/group/schurgrp/jhansen/Betty_segmentation/June2023/DONE_crosssection_L1g1w_TS003/old/L1g1w_TS003_bin8_correct_trimmed.mrc

Opened L1g1w_TS003_bin8_correct_trimmed.mrc as #3, grid size 510,720,121,
pixel 17.1, shown at level 0.347, step 2, values float32  

> save /Users/jhansen/Desktop/session.cxs

——— End of log from Mon Jul 10 09:55:33 2023 ———

opened ChimeraX session  

> volume #2 level 0.197

> close #3

> volume #2 level 0.4037

> rename #2 L1G1W_ts003_AD.mrc

> rename #9 L1G1W_ts003_collagen.stl

> volume #2 level 0.3395

> volume #2 step 1

> save
> /mnt/beegfs/schurgrp/bzens/ECMpaper_deposition/segmentation/DONE_crosssection_L1g1w_TS003/L1G1W_ts003_chimeraX.cxs
> includeMaps true

——— End of log from Mon Jul 15 13:21:12 2024 ———

opened ChimeraX session  
Unable to restore session, resetting.  
  
Traceback (most recent call last):  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/session.py", line 725, in restore  
obj = sm.restore_snapshot(self, data)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/bond_rot/manager.py", line 154, in restore_snapshot  
mgr._ses_restore(data)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/bond_rot/manager.py", line 167, in _ses_restore  
self.clear()  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/bond_rot/manager.py", line 45, in delete_all_rotations  
for rotater in self.bond_rotaters.values():  
AttributeError: 'list' object has no attribute 'values'  
  
Traceback (most recent call last):  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/session.py", line 725, in restore  
obj = sm.restore_snapshot(self, data)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/bond_rot/manager.py", line 154, in restore_snapshot  
mgr._ses_restore(data)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/bond_rot/manager.py", line 167, in _ses_restore  
self.clear()  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/bond_rot/manager.py", line 45, in delete_all_rotations  
for rotater in self.bond_rotaters.values():  
AttributeError: 'list' object has no attribute 'values'  
  
During handling of the above exception, another exception occurred:  
  
Traceback (most recent call last):  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/ui/gui.py", line 267, in event  
_open_dropped_file(self.session, event.file())  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/ui/gui.py", line 1919, in _open_dropped_file  
run(session, 'open %s' % FileNameArg.unparse(path))  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/commands/run.py", line 36, in run  
results = command.run(text, log=log, return_json=return_json)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/commands/cli.py", line 2856, in run  
result = ci.function(session, **kw_args)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/open_command/cmd.py", line 118, in cmd_open  
models = Command(session, registry=registry).run(provider_cmd_text,
log=log)[0]  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/commands/cli.py", line 2856, in run  
result = ci.function(session, **kw_args)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/open_command/cmd.py", line 181, in provider_open  
models, status = collated_open(session, None, [data], data_format,
_add_models,  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/open_command/cmd.py", line 433, in collated_open  
return remember_data_format()  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/open_command/cmd.py", line 403, in remember_data_format  
models, status = func(*func_args, **func_kw)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core_formats/__init__.py", line 26, in open  
return cxs_open(session, data, **kw)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/session.py", line 995, in open  
session.restore(stream, path=path, resize_window=resize_window)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/session.py", line 733, in restore  
self.reset()  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/session.py", line 535, in reset  
sm.reset_state(container, self)  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/bond_rot/manager.py", line 149, in reset_state  
self.clear()  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/bond_rot/manager.py", line 45, in delete_all_rotations  
for rotater in self.bond_rotaters.values():  
AttributeError: 'list' object has no attribute 'values'  
  
AttributeError: 'list' object has no attribute 'values'  
  
File
"/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/bond_rot/manager.py", line 45, in delete_all_rotations  
for rotater in self.bond_rotaters.values():  
  
See log for complete Python traceback.  
  

> open
> /Users/christoph/ownCloud/BiochSoc/FromFloAndBettina/Segmentation_Fig3/L1g1w_TS003_bin8_correct_trimmed.mrc

Opened L1g1w_TS003_bin8_correct_trimmed.mrc as #1, grid size 510,720,121,
pixel 17.1, shown at level 0.347, step 2, values float32  




OpenGL version: 4.1 Metal - 88
OpenGL renderer: Apple M1
OpenGL vendor: AppleHardware:

    Hardware Overview:

      Model Name: MacBook Pro
      Model Identifier: MacBookPro17,1
      Model Number: Z11F0001XD/A
      Chip: Unknown
      Total Number of Cores: 8 (4 performance and 4 efficiency)
      Memory: 16 GB
      System Firmware Version: 10151.101.3
      OS Loader Version: 10151.101.3

Software:

    System Software Overview:

      System Version: macOS 14.4 (23E214)
      Kernel Version: Darwin 23.4.0
      Time since boot: 7 days, 23 hours, 48 minutes

Graphics/Displays:

    Apple M1:

      Chipset Model: Apple M1
      Type: GPU
      Bus: Built-In
      Total Number of Cores: 8
      Vendor: Apple (0x106b)
      Metal Support: Metal 3
      Displays:
        Color LCD:
          Display Type: Built-In Retina LCD
          Resolution: 2560 x 1600 Retina
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal

Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    appnope: 0.1.2
    Babel: 2.9.1
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2021.5.30
    cftime: 1.5.1.1
    charset-normalizer: 2.0.9
    ChimeraX-AddCharge: 1.2.2
    ChimeraX-AddH: 2.1.11
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.2.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.31
    ChimeraX-AtomicLibrary: 4.2
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.0
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.6.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.2
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.2.2
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5
    ChimeraX-CommandLine: 1.1.5
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.3
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.3.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.2.2
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1.5
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.1.2
    ChimeraX-Help: 1.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0
    ChimeraX-Label: 1.1
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.4
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 2.0.4
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.4
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.2.6
    ChimeraX-ModelPanel: 1.2.1
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.2
    ChimeraX-OpenCommand: 1.7
    ChimeraX-PDB: 2.6.5
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0.1
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.4.6
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.1
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.6.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1
    ChimeraX-ToolshedUtils: 1.2
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.13.7
    ChimeraX-uniprot: 2.2
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.0.1
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.4
    cxservices: 1.1
    cycler: 0.11.0
    Cython: 0.29.24
    decorator: 5.1.0
    docutils: 0.17.1
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 3.6.0
    html2text: 2020.1.16
    idna: 3.3
    ihm: 0.21
    imagecodecs: 2021.4.28
    imagesize: 1.3.0
    ipykernel: 5.5.5
    ipython: 7.23.1
    ipython-genutils: 0.2.0
    jedi: 0.18.0
    Jinja2: 3.0.1
    jupyter-client: 6.1.12
    jupyter-core: 4.9.1
    kiwisolver: 1.3.2
    lxml: 4.6.3
    lz4: 3.1.3
    MarkupSafe: 2.0.1
    matplotlib: 3.4.3
    matplotlib-inline: 0.1.3
    msgpack: 1.0.2
    netCDF4: 1.5.7
    networkx: 2.6.3
    numexpr: 2.8.0
    numpy: 1.21.2
    openvr: 1.16.801
    packaging: 21.0
    ParmEd: 3.2.0
    parso: 0.8.3
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 8.3.2
    pip: 21.2.4
    pkginfo: 1.7.1
    prompt-toolkit: 3.0.23
    psutil: 5.8.0
    ptyprocess: 0.7.0
    pycollada: 0.7.1
    pydicom: 2.1.2
    Pygments: 2.10.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.6
    PyQt5-commercial: 5.15.2
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.2
    python-dateutil: 2.8.2
    pytz: 2021.3
    pyzmq: 22.3.0
    qtconsole: 5.1.1
    QtPy: 1.11.3
    RandomWords: 0.3.0
    requests: 2.26.0
    scipy: 1.7.1
    setuptools: 57.5.0
    sfftk-rw: 0.7.1
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    Sphinx: 4.2.0
    sphinx-autodoc-typehints: 1.12.0
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-jurko: 0.6
    tifffile: 2021.4.8
    tinyarray: 1.2.3
    tornado: 6.1
    traitlets: 5.1.1
    urllib3: 1.26.7
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.37.0
    wheel-filename: 1.3.0

[Eric Pettersen]

Hi Christoph,

The session your collaborator sent you needs to be opened in ChimeraX 1.7 or later, so you would need to upgrade the version of ChimeraX you are using in order to open it.

--Eric

Eric Pettersen
UCSF Computer Graphics Lab