![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 16 months ago
Closed 16 months ago
#15451 closed defect (duplicate)
Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-14.5-arm64-arm-64bit
ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x0000000201654c00 (most recent call first):
File "/opt/sbgrid/i386-mac/chimerax/1.6.1/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/opt/sbgrid/i386-mac/chimerax/1.6.1/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 892 in init
File "/opt/sbgrid/i386-mac/chimerax/1.6.1/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in
File "/opt/sbgrid/i386-mac/chimerax/1.6.1/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/opt/sbgrid/i386-mac/chimerax/1.6.1/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
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{
"uptime" : 130000,
"procRole" : "Background",
"version" : 2,
"userID" : 501,
"deployVersion" : 210,
"modelCode" : "MacBookPro18,3",
"coalitionID" : 11211,
"osVersion" : {
"train" : "macOS 14.5",
"build" : "23F79",
"releaseType" : "User"
},
"captureTime" : "2024-06-17 15:58:10.8402 -0400",
"codeSigningMonitor" : 1,
"incident" : "1A0A0211-A5E8-4C96-9714-56512626B9D7",
"pid" : 15584,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2024-06-16 21:33:40.9686 -0400",
"procStartAbsTime" : 1739802095667,
"procExitAbsTime" : 3158348785996,
"procName" : "ChimeraX",
"procPath" : "\/opt\/sbgrid\/*\/ChimeraX.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.6.1","CFBundleVersion":"1.6.1.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"7BC32027-8DA2-5AA8-A54B-EDF57A3C8A7A","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "F1607F99-EB8D-84F0-51FA-D86C3D8CAC44",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 4294967295,
"instructionByteStream" : {"beforePC":"fyMD1f17v6n9AwCRW+D\/l78DAJH9e8Go\/w9f1sADX9YQKYDSARAA1A==","atPC":"AwEAVH8jA9X9e7+p\/QMAkVDg\/5e\/AwCR\/XvBqP8PX9bAA1\/WcAqA0g=="},
"wakeTime" : 5,
"sleepWakeUUID" : "D223B5A0-4645-472A-BFA1-4283181DADEF",
"sip" : "enabled",
"vmRegionInfo" : "0x18 is not in any region. Bytes before following region: 4338319336\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n __TEXT 102958000-10295c000 [ 16K] r-x\/r-x SM=COW \/opt\/sbgrid\/*\/ChimeraX.app\/Contents\/MacOS\/ChimeraX",
"exception" : {"codes":"0x0000000000000001, 0x0000000000000018","rawCodes":[1,24],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000000000000018"},
"termination" : {"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault: 11","byProc":"ChimeraX","byPid":15584},
"vmregioninfo" : "0x18 is not in any region. Bytes before following region: 4338319336\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n __TEXT 102958000-10295c000 [ 16K] r-x\/r-x SM=COW \/opt\/sbgrid\/*\/ChimeraX.app\/Contents\/MacOS\/ChimeraX",
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"sharedCache" : {
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"vmSummary" : "ReadOnly portion of Libraries: Total=1.4G resident=0K(0%) swapped_out_or_unallocated=1.4G(100%)\nWritable regions: Total=5.9G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=5.9G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nAccelerate framework 384K 3 \nActivity Tracing 256K 1 \nCG image 1808K 82 \nColorSync 624K 31 \nCoreAnimation 3840K 206 \nCoreGraphics 64K 4 \nCoreImage 48K 3 \nCoreUI image data 6144K 67 \nFoundation 48K 2 \nKernel Alloc Once 1456K 5 \nMALLOC 5.0G 128 \nMALLOC guard page 192K 12 \nMach message 64K 3 \nOpenGL GLSL 384K 4 \nSTACK GUARD 576K 36 \nStack 169.3M 37 \nStack Guard 56.0M 1 \nVM_ALLOCATE 501.2M 458 \nVM_ALLOCATE (reserved) 224.0M 2 reserved VM address space (unallocated)\n__AUTH 2146K 389 \n__AUTH_CONST 31.3M 606 \n__CTF 824 1 \n__DATA 21.6M 745 \n__DATA_CONST 41.3M 759 \n__DATA_DIRTY 1974K 220 \n__FONT_DATA 2352 1 \n__GLSLBUILTINS 5174K 1 \n__INFO_FILTER 8 1 \n__LINKEDIT 563.4M 148 \n__OBJC_RO 71.9M 1 \n__OBJC_RW 2199K 1 \n__TEXT 918.3M 776 \ndyld private memory 320K 4 \nmapped file 596.4M 87 \nshared memory 3664K 23 \n=========== ======= ======= \nTOTAL 8.1G 4848 \nTOTAL, minus reserved VM space 7.9G 4848 \n",
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===== Log before crash start =====
Startup Messages
---
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/cxw/Library/CloudStorage/OneDrive-Personal/Lab-Xiong/Maps-
> refined/VLP-T8I-pfo-Len-BVM/T8iLen+BVMvlp1301-2.10a-60.map
Opened T8iLen+BVMvlp1301-2.10a-60.map as #1, grid size 500,488,324, pixel
0.334, shown at level 11.5, step 2, values float32
> open /Users/cxw/Library/CloudStorage/OneDrive-Personal/Lab-Xiong/Maps-
> refined/VLP-T8I-pfo-Len-BVM/T8iLen+BVMvlp1301-2.10a-100.map
Opened T8iLen+BVMvlp1301-2.10a-100.map as #2, grid size 500,488,324, pixel
0.334, shown at level 10.2, step 2, values float32
> open /Users/cxw/Library/CloudStorage/OneDrive-Personal/Lab-Xiong/Maps-
> refined/VLP-T8I-pfo-Len-BVM/EM-SPA_apply_ncs_146.pdb
Summary of feedback from opening /Users/cxw/Library/CloudStorage/OneDrive-
Personal/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-BVM/EM-SPA_apply_ncs_146.pdb
---
warnings | Ignored bad PDB record found on line 2029
Ignored bad PDB record found on line 3947
Ignored bad PDB record found on line 5842
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
2021 messages similar to the above omitted
Ignored bad PDB record found on line 7870
Duplicate atom serial number found: 2027
Duplicate atom serial number found: 2028
Duplicate atom serial number found: 2029
Duplicate atom serial number found: 2030
Duplicate atom serial number found: 2031
1911 messages similar to the above omitted
Ignored bad PDB record found on line 9788
Duplicate atom serial number found: 3943
Duplicate atom serial number found: 3944
Duplicate atom serial number found: 3945
Duplicate atom serial number found: 3946
Duplicate atom serial number found: 3947
1888 messages similar to the above omitted
Ignored bad PDB record found on line 11683
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
2021 messages similar to the above omitted
Ignored bad PDB record found on line 13711
Duplicate atom serial number found: 2027
Duplicate atom serial number found: 2028
Duplicate atom serial number found: 2029
Duplicate atom serial number found: 2030
Duplicate atom serial number found: 2031
1911 messages similar to the above omitted
Ignored bad PDB record found on line 15629
Duplicate atom serial number found: 3943
Duplicate atom serial number found: 3944
Duplicate atom serial number found: 3945
Duplicate atom serial number found: 3946
Duplicate atom serial number found: 3947
1888 messages similar to the above omitted
Ignored bad PDB record found on line 17524
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
2021 messages similar to the above omitted
Ignored bad PDB record found on line 19552
Duplicate atom serial number found: 2027
Duplicate atom serial number found: 2028
Duplicate atom serial number found: 2029
Duplicate atom serial number found: 2030
Duplicate atom serial number found: 2031
1911 messages similar to the above omitted
Ignored bad PDB record found on line 21470
Duplicate atom serial number found: 3943
Duplicate atom serial number found: 3944
Duplicate atom serial number found: 3945
Duplicate atom serial number found: 3946
Duplicate atom serial number found: 3947
1888 messages similar to the above omitted
Ignored bad PDB record found on line 23365
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
2021 messages similar to the above omitted
Ignored bad PDB record found on line 25393
Duplicate atom serial number found: 2027
Duplicate atom serial number found: 2028
Duplicate atom serial number found: 2029
Duplicate atom serial number found: 2030
Duplicate atom serial number found: 2031
1911 messages similar to the above omitted
Ignored bad PDB record found on line 27311
Duplicate atom serial number found: 3943
Duplicate atom serial number found: 3944
Duplicate atom serial number found: 3945
Duplicate atom serial number found: 3946
Duplicate atom serial number found: 3947
1888 messages similar to the above omitted
Ignored bad PDB record found on line 29206
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
2021 messages similar to the above omitted
Ignored bad PDB record found on line 31234
Duplicate atom serial number found: 2027
Duplicate atom serial number found: 2028
Duplicate atom serial number found: 2029
Duplicate atom serial number found: 2030
Duplicate atom serial number found: 2031
1911 messages similar to the above omitted
Ignored bad PDB record found on line 33152
Duplicate atom serial number found: 3943
Duplicate atom serial number found: 3944
Duplicate atom serial number found: 3945
Duplicate atom serial number found: 3946
Duplicate atom serial number found: 3947
1888 messages similar to the above omitted
Ignored bad PDB record found on line 35047
Ignored bad PDB record found on line 35048
Chain information for EM-SPA_apply_ncs_146.pdb #3
---
Chain | Description
A B C D E F G H I J K L M N O P Q R | No description available
> hide atoms
> show cartoons
> volume #1 step 1
> volume #2 step 1
> volume #1 level 10.32
> select /A:9-240
1793 atoms, 1832 bonds, 232 residues, 1 model selected
> view sel
> view #3/A:18
> select #3/A:18
11 atoms, 10 bonds, 1 residue, 1 model selected
> show sel atoms
> style sel stick
Changed 11 atom styles
> color #1 silver models
> color #1 #98989dff models
> color #1 #5e5ce6ff models
> color #1 #942192ff models
> color #1 #ff9300ff models
> color #1 #942192ff models
> color #1 white models
> color #3 #942192ff
> color #3 #990099ff
> color #3 #3333ccff
> color #3 #333399ff
> color #3 #6666ffff
> volume #1 level 3.806
> select #3/A:18,23,57,70,74,158,227
68 atoms, 63 bonds, 7 residues, 1 model selected
> volume zone #2 nearAtoms sel range 3
> volume zone #1 nearAtoms sel range 3
> volume zone #1 nearAtoms sel range 2.4
> hide #!2 models
> transparency #1 20
> transparency #1 50
> set bgColor white
> hide sel cartoons
> volume #1 level 5.092
> volume #1 level 5.333
> hide #3 cartoons
> volume #1 level 4.127
> hide #!1 models
> show #!2 models
> volume #2 level 4.154
> color #2 #ffffb282 models
> volume zone #2 nearAtoms sel range 2.4
> view #3/A:23
> select up
492 atoms, 496 bonds, 62 residues, 1 model selected
> select #3/A:18,23,57,70,74,158,227
68 atoms, 63 bonds, 7 residues, 1 model selected
> show sel atoms
> style sel stick
Changed 68 atom styles
> color sel byhetero
> volume #2 level 4.3
> volume #2 level 5
> volume #2 level 5.5
> volume #2 level 6
> volume zone #2 nearAtoms sel range 2.3
> volume zone #2 nearAtoms sel range 2
> volume zone #2 nearAtoms sel range 1.8
> volume #2 level 6.5
> volume #2 level 7
> lighting full
> lighting soft
> lighting simple
> ~select
Nothing selected
> volume #2 level 7.5
> volume #2 level 7
> volume #1 level 7
> hide #!2 models
> show #!1 models
> volume #1 level 8
> volume #1 level 9
> volume #1 level 10
> hide #!1 models
> show #!2 models
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/W23-new-100.png width 1656 height 1205 supersample 3
> view #3/A:18
> volume #2 level 5
> volume #2 level 4
> view #3/B:18
> view #3/A:57
> volume #2 level 7
> color #2 #ccccccff models
> color #2 #999999ff models
> color #2 #ccccccff models
> color #2 #999999ff models
> color #2 #99999980 models
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/N57-new-100.png width 1656 height 1205 supersample 3
> view #3/A:23
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/W23-new-100.png width 1656 height 1205 supersample 3
> view #3/A:70
> volume #2 level 6
> hide #!2 models
> show #!2 models
> open /Users/cxw/Library/CloudStorage/OneDrive-Personal/Lab-Xiong/Maps-
> refined/VLP-T8I-pfo-Len-BVM/EM-SPA_apply_ncs_146-for-figure.pdb
Summary of feedback from opening /Users/cxw/Library/CloudStorage/OneDrive-
Personal/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-BVM/EM-SPA_apply_ncs_146-for-
figure.pdb
---
warnings | Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
29170 messages similar to the above omitted
Chain information for EM-SPA_apply_ncs_146-for-figure.pdb #4
---
Chain | Description
A B C D E F G H I J K L M N O P Q R | No description available
> hide atoms
> hide cartoons
> hide #3 models
> color #4 #6633ccff
> color #4 #6666ffff
> view #4/A:18
> volume zone #2 nearAtoms sel range 1,8
Invalid "range" argument: Expected a number
> volume zone #2 nearAtoms sel range 1.8
no atoms specified for zone
> volume zone #2 nearAtoms #4/A:18 range 1.8
> show #4/A:18 atoms
> style #4 stick
Changed 34740 atom styles
> color #4 byhetero
> volume #2 level 5.5
> volume #2 level 5
> volume #2 level 4
> volume #2 level 7
> volume #2 level 6
> volume #2 level 5
> volume zone #2 nearAtoms #4/A:18 range 1.7
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/R18-new-100.png width 1656 height 1205 supersample 3
> volume #2 level 4
> volume #2 level 3
> volume #2 level 6
> hide #4 atoms
> select #4/A:70
9 atoms, 8 bonds, 1 residue, 1 model selected
> view sel
> show sel atoms
> style sel stick
Changed 9 atom styles
> select up
170 atoms, 171 bonds, 21 residues, 1 model selected
> ~select
Nothing selected
> volume zone #2 nearAtoms #4/A:70 range 1.7
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/K70-new-100.png width 1656 height 1205 supersample 3
> view N74
Expected an objects specifier or a view name or a keyword
> view #4/A:74
> hide #4 atoms
> show #4/A:74 atoms
> volume zone #2 nearAtoms #4/A:74 range 1.7
> volume #2 level 7
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/N74-new-100.png width 1656 height 1205 supersample 3
> hide #4 atoms
> view #4/A:158
> show #4/A:158 atoms
> volume zone #2 nearAtoms #4/A:158 range 1.7
> volume #2 level 6
> volume #2 level 5
> volume #2 level 6
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/K158-new-100.png width 1656 height 1205 supersample 3
> hide #4 atoms
> view #4/A:227
> volume zone #2 nearAtoms #4/A:227 range 1.7
> show #4/A:227 atoms
> volume #2 level 5
> volume #2 level 6
> volume #2 level 5.5
> volume #2 level 5
> volume #2 level 3
> volume #2 level 5
> volume #2 level 6
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/K227-new-100.png width 1656 height 1205 supersample 3
> hide #!2 models
> show #!1 models
> volume #1 level 6
> volume #1 level 7
> volume #1 level 5
> color #1 #999999ff models
> color #1 #666666ff models
> color #1 #66666680 models
> color #1 #999999ff models
> color #1 #99999980 models
> volume zone #1 nearAtoms #4/A:227 range 1.7
> volume #1 level 4
> volume zone #1 nearAtoms #4/A:227 range 1.8
> volume #1 level 3.5
> volume #1 level 3
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/K227-new-60.png width 1656 height 1205 supersample 3
> view #4/A:158
> volume zone #1 nearAtoms #4/A:158 range 1.8
> show #4/A:158 atoms
> hide #4 atoms
> show #4/A:158 atoms
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/K158-new-60.png width 1656 height 1205 supersample 3
> hide #4 atoms
> show #4/A:18 atoms
> volume zone #1 nearAtoms #4/A:18 range 1.8
> view #4/A:18
> volume #1 level 4
> volume #1 level 4.5
> volume #1 level 5
> volume #1 level 5.5
> volume #1 level 4
> volume #1 level 4.5
> save /Users/cxw/OneDrive/Lab-Xiong/Maps-refined/VLP-T8I-pfo-Len-
> BVM/images/R18-new-60.png width 1656 height 1205 supersample 3
Unsupported scale factor (0.000000) detected on Display0
QPainter::begin: Paint device returned engine == 0, type: 3
===== Log before crash end =====
Log:
Startup Messages
---
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 88.1
OpenGL renderer: Apple M1 Pro
OpenGL vendor: Apple
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro18,3
Model Number: MKGQ3LL/A
Chip: Apple M1 Pro
Total Number of Cores: 10 (8 performance and 2 efficiency)
Memory: 16 GB
System Firmware Version: 10151.121.1
OS Loader Version: 10151.121.1
Software:
System Software Overview:
System Version: macOS 14.5 (23F79)
Kernel Version: Darwin 23.5.0
Time since boot: 7 days, 10 hours, 28 minutes
Graphics/Displays:
Apple M1 Pro:
Chipset Model: Apple M1 Pro
Type: GPU
Bus: Built-In
Total Number of Cores: 16
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3024 x 1964 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
LG HDR WQHD:
Resolution: 3440 x 1440 (UWQHD - Ultra-Wide Quad HD)
UI Looks like: 3440 x 1440 @ 50.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.12.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
build: 0.10.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 3.1.0
ChimeraX-AddCharge: 1.5.9.1
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.9.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.43.10
ChimeraX-AtomicLibrary: 10.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.8
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-Clipper: 0.21.0
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6.1
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.12
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.9
ChimeraX-ModelPanel: 1.3.7
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.0
ChimeraX-NRRD: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10.1
ChimeraX-PDB: 2.7.2
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.3
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.28.4
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.1.3
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.33
debugpy: 1.6.7
decorator: 5.1.1
docutils: 0.19
executing: 1.2.0
filelock: 3.9.0
fonttools: 4.39.3
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.2.22
imagesize: 1.4.1
importlib-metadata: 6.6.0
ipykernel: 6.21.1
ipython: 8.10.0
ipython-genutils: 0.2.0
ipywidgets: 8.0.6
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.0.2
jupyter-core: 5.3.0
jupyterlab-widgets: 3.0.7
kiwisolver: 1.4.4
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.2
matplotlib: 3.6.3
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.2
networkx: 2.8.8
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 3.5.0
prompt-toolkit: 3.0.38
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.14.0
pynrrd: 1.0.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.4.2
PyQt6-Qt6: 6.4.3
PyQt6-sip: 13.4.1
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.3
python-dateutil: 2.8.2
pytz: 2023.3
pyzmq: 25.0.2
qtconsole: 5.4.0
QtPy: 2.3.1
RandomWords: 0.4.0
requests: 2.28.2
scipy: 1.9.3
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.4.1
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.1
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tcia-utils: 1.2.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.3.1
traitlets: 5.9.0
typing-extensions: 4.5.0
tzdata: 2023.3
urllib3: 1.26.15
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.7
zipp: 3.15.0
Change History (2)
comment:1 by , 16 months ago
| Component: | Unassigned → Window Toolkit |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0 |
comment:2 by , 16 months ago
| Resolution: | → duplicate |
|---|---|
| Status: | accepted → closed |
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