Opened 7 years ago

Closed 7 years ago

#1535 closed defect (duplicate)

Bild: 'Place' object has no attribute 'tranform_normals'

Reported by: chimerax-bug-report@… Owned by: Greg Couch
Priority: normal Milestone:
Component: Input/Output Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        Linux-3.10.0-862.9.1.el7.x86_64-x86_64-with-centos-7.5.1804-Core
ChimeraX Version: 0.8 (2018-12-12)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 0.8 (2018-12-12)  
How to cite UCSF ChimeraX  

> open cyanoCIS_sheath_extended.cxs

opened ChimeraX session  

> open /home/xujw/Documents/CIS/figures/cylinder_bar.bild

Traceback (most recent call last):  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/ui/gui.py", line 542, in _qt_safe  
run(session, "open " + quote_if_necessary(paths[0]))  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/core/commands/run.py", line 31, in run  
results = command.run(text, log=log)  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/core/commands/cli.py", line 2581, in run  
result = ci.function(session, **kw_args)  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/core/commands/open.py", line 41, in open  
from_database=from_database, ignore_cache=ignore_cache, **kw))  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/core/commands/open.py", line 117, in open  
models = handle_unknown_kw(session.models.open, paths, format=format,
name=name, **kw)  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/core/commands/open.py", line 62, in handle_unknown_kw  
return f(*args, **kw)  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/core/models.py", line 587, in open  
session, filenames, format=format, name=name, **kw)  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/core/io.py", line 461, in open_multiple_data  
models, status = open_data(session, fspec, format=format, name=name, **kw)  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/core/io.py", line 416, in open_data  
models, status = open_func(*args, **kw)  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/bild/__init__.py", line 32, in open_file  
return bild.read_bild(session, stream, file_name)  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/bild/bild.py", line 561, in read_bild  
return b.parse_stream(stream)  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/bild/bild.py", line 112, in parse_stream  
func(self, tokens)  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/bild/bild.py", line 507, in vector_command  
radius, p0, p1, closed=False, xform=self.transforms[-1], pure=self.pure[-1])  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/bild/bild.py", line 589, in get_cylinder  
xform.tranform_normals(normals, in_place=True, is_rotation=pure)  
AttributeError: 'Place' object has no attribute 'tranform_normals'  
  
AttributeError: 'Place' object has no attribute 'tranform_normals'  
  
File "/opt/UCSF/ChimeraX-daily/lib/python3.6/site-
packages/chimerax/bild/bild.py", line 589, in get_cylinder  
xform.tranform_normals(normals, in_place=True, is_rotation=pure)  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 390.77
OpenGL renderer: GeForce GTX 1080 Ti/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Change History (2)

comment:1 by Eric Pettersen, 7 years ago

Component: UnassignedInput/Output
Owner: set to Greg Couch
Platform: all
Project: ChimeraX
Status: newassigned
Summary: ChimeraX bug report submissionBild: 'Place' object has no attribute 'tranform_normals'

comment:2 by Greg Couch, 7 years ago

Resolution: duplicate
Status: assignedclosed

Duplicate of #1533.

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