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#15271 closed defect (duplicate)

wrapped C/C++ object of type ChainMenuButton has been deleted

Reported by:	chimerax-bug-report@…	Owned by:	Eric Pettersen
Priority:	normal	Milestone:
Component:	UI	Version:
Keywords:		Cc:
Blocked By:		Blocking:
Notify when closed:		Platform:	all
Project:	ChimeraX

Description

The following bug report has been submitted:
Platform:        Windows-10-10.0.22621
ChimeraX Version: 1.1 (2020-09-09 22:22:27 UTC)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 1.1 (2020-09-09)  
© 2016-2020 Regents of the University of California. All rights reserved.  

> open "C:\Users\daisy\OneDrive\OneDrive - connect.hku.hk\My
> drive\HKU\PHD\uniCell\Models\Pchi_CAN.cxs" format session

Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\core\triggerset.py", line 130, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\ui\widgets\item_chooser.py", line 305, in _items_change  
if not hasattr(self, '_recursion'):  
RuntimeError: wrapped C/C++ object of type ChainMenuButton has been deleted  
  
Error processing trigger "add models":  
RuntimeError: wrapped C/C++ object of type ChainMenuButton has been deleted  
  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\ui\widgets\item_chooser.py", line 305, in _items_change  
if not hasattr(self, '_recursion'):  
  
See log for complete Python traceback.  
  
Log from Wed Jul 26 15:54:33 2023UCSF ChimeraX version: 1.1 (2020-09-09)  
© 2016-2020 Regents of the University of California. All rights reserved.  

> open "C:\Users\daisy\OneDrive\OneDrive - connect.hku.hk\My
> drive\HKU\PHD\uniCell\Models\Pchi_CAN.cxs" format session

Log from Mon Jul 24 20:50:02 2023UCSF ChimeraX version: 1.1 (2020-09-09)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/Experiments_2023/Structural
> Modelling/Modeller/canonical/PDBs/Salhel_SOX/uniSox_Salhel_Soxa_mOct4.B99990201.pdb"

Chain information for uniSox_Salhel_Soxa_mOct4.B99990201.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
C | No description available  
D | No description available  
  

> set bgColor white

> preset cartoons/nucleotides ribbons/slabs

Changed 0 atom styles  
Preset expands to these ChimeraX commands:

    
    
    show nucleic
    hide protein|solvent|H
    surf hide
    style (protein|nucleic|solvent) & @@draw_mode=0 stick
    cartoon
    cartoon style modeh def arrows t arrowshelix f arrowscale 2 wid 2 thick 0.4 sides 12 div 20
    cartoon style ~(nucleic|strand) x round
    cartoon style (nucleic|strand) x rect
    nucleotides tube/slab shape box

  

> preset "overall look" publication

Preset expands to these ChimeraX commands:

    
    
    set bg white
    graphics silhouettes t

  

> nucleotides ladder

> select ::name="DA"::name="DC"::name="DG"::name="DT"

2009 atoms, 2252 bonds, 98 residues, 1 model selected  

> color sel bynucleotide

> color sel dark gray

> select clear

Alignment identifier is 1/A  
Alignment identifier is 1/B  
Alignment identifier is 1/C  
Alignment identifier is 1/D  

> color #D55E00 :1-164

Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword  

> color #D55E00 ribbons :1-164

Expected ',' or a keyword  

> color #D55E00 ribbons #0 :1-164

Expected ',' or a keyword  

> select /B:233

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select up

134 atoms, 136 bonds, 16 residues, 1 model selected  

> select up

750 atoms, 770 bonds, 90 residues, 1 model selected  

> color #D55E00 sel

Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword  

> color #D55E00

> select /D:344

20 atoms, 21 bonds, 1 residue, 1 model selected  

> select up

998 atoms, 1115 bonds, 49 residues, 1 model selected  

> select up

2009 atoms, 2252 bonds, 98 residues, 1 model selected  

> ui tool show "Color Actions"

> color sel dim gray

> select clear

> select /A:12

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select clear

> select /B:231

10 atoms, 10 bonds, 1 residue, 1 model selected  

> select up

134 atoms, 136 bonds, 16 residues, 1 model selected  

> select up

750 atoms, 770 bonds, 90 residues, 1 model selected  

> color sel #ccccbbff

> color sel #ccbb44ff

> select /D:311

19 atoms, 20 bonds, 1 residue, 1 model selected  

> select clear

> select clear

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Salhel_SoxOct_Can.png" width 752 height 334
> supersample 3

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Salhel_SoxOct_Can.png" width 1000 height 444
> supersample 3

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Salhel_SoxOct_Can.png" width 2000 height 888
> supersample 4

QWindowsWindow::setGeometry: Unable to set geometry 328x49+1278-37 (frame:
344x88+1270-68) on QWidgetWindow/"QDockWidgetClassWindow" on "\\\\.\DISPLAY1".
Resulting geometry: 217x42+1275-51 (frame: 233x81+1267-82) margins: 8, 31, 8,
8 minimum size: 55x33 maximum size: 524287x524287 MINMAXINFO maxSize=0,0
maxpos=0,0 mintrack=126,105 maxtrack=1048590,1048613)  

QWindowsWindow::setGeometry: Unable to set geometry 328x67+1568-167 (frame:
344x106+1560-198) on QWidgetWindow/"QDockWidgetClassWindow" on
"\\\\.\DISPLAY1". Resulting geometry: 217x43+1565-181 (frame: 233x82+1557-212)
margins: 8, 31, 8, 8 minimum size: 55x33 maximum size: 524287x524287
MINMAXINFO maxSize=0,0 maxpos=0,0 mintrack=126,105 maxtrack=1048590,1048613)  

QWindowsWindow::setGeometry: Unable to set geometry 217x43+1558-181 (frame:
233x82+1550-212) on QWidgetWindow/"QDockWidgetClassWindow" on
"\\\\.\DISPLAY1". Resulting geometry: 217x66+1558-181 (frame:
233x105+1550-212) margins: 8, 31, 8, 8 minimum size: 55x33 maximum size:
524287x524287 MINMAXINFO maxSize=0,0 maxpos=0,0 mintrack=126,105
maxtrack=1048590,1048613)  

> show sel atoms

> color sel byhetero

> color sel byhetero

> show sel atoms

> color sel byhetero

> select clear

> show sel atoms

> color sel byhetero

> show sel atoms

> show sel atoms

> style sel stick

Changed 9 atom styles  

> color sel byhetero

> select clear

> select up

2 atoms, 1 bond, 1 residue, 1 model selected  

> select /A:90

6 atoms, 5 bonds, 1 residue, 1 model selected  

> show sel atoms

> color sel byhetero

> hide sel atoms

> select clear

> select clear

> select /A:90

6 atoms, 5 bonds, 1 residue, 1 model selected  

> hide sel atoms

> select clear

> select up

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select up

18 atoms, 16 bonds, 2 residues, 1 model selected  

> select up

20 atoms, 17 bonds, 3 residues, 1 model selected  

> select up

22 atoms, 18 bonds, 4 residues, 1 model selected  

> select up

24 atoms, 19 bonds, 5 residues, 1 model selected  

> select up

47 atoms, 42 bonds, 5 residues, 1 model selected  

> select up

54 atoms, 48 bonds, 6 residues, 1 model selected  

> select up

56 atoms, 49 bonds, 7 residues, 1 model selected  

> select up

62 atoms, 56 bonds, 7 residues, 1 model selected  

> select up

423 atoms, 424 bonds, 51 residues, 1 model selected  

> select down

71 atoms, 56 bonds, 8 residues, 1 model selected  

> style sel ball

Changed 71 atom styles  

> select /A:89

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select up

10 atoms, 8 bonds, 2 residues, 1 model selected  

> style sel ball

Changed 10 atom styles  

> select up

12 atoms, 10 bonds, 2 residues, 1 model selected  

> style sel ball

Changed 12 atom styles  

> select clear

> select up

11 atoms, 3 bonds, 8 residues, 1 model selected  

> select up

72 atoms, 64 bonds, 8 residues, 1 model selected  

> color sel cyan

> color sel byhetero

> select clear

> select up

2 atoms, 1 bond, 1 residue, 1 model selected  

> select up

8 atoms, 7 bonds, 1 residue, 1 model selected  

> color sel cyan

> select clear

> select up

2 atoms, 1 bond, 1 residue, 1 model selected  

> color sel cyan

> select clear

> select clear

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Salhel_SoxOct_Can_Zoom.png" width 629 height
> 334 supersample 3

> select up

9 atoms, 8 bonds, 1 residue, 1 model selected  

> hide sel atoms

> color sel yellow

> select clear

> select /B:222

9 atoms, 8 bonds, 1 residue, 1 model selected  

> ui tool show "Color Actions"

> color sel dark khaki

> color sel yellow

> select clear

> select clear

> select /B:222

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select clear

> select /B:222

9 atoms, 8 bonds, 1 residue, 1 model selected  

> ui tool show "Color Actions"

> ui tool show "Color Actions"

> color sel #cce4f7ff

> color sel #f9f9f9ff

> color sel #f0f0f0ff

> color sel #ccbb44ff

> color sel #ffffffff

> color sel #55ffffff

> color sel #000000ff

> color sel #ffaaffff

> color sel #ccbb44ff

> color sel #ffaaffff

> color sel #cce4f7ff

> color sel #f9f9f9ff

> color sel #ffaaffff

> color sel #aaaa00ff

> color sel #ccbb44ff

> color sel #aaaa00ff

> color sel #abab00ff

> color sel #a4a400ff

> color sel #ccbb44ff

> color sel #aaaa00ff

> color sel #ccbb44ff

> color sel #aaaa00ff

> color sel #ccbb44ff

> select clear

> select up

9 atoms, 8 bonds, 1 residue, 1 model selected  

> style sel ball

Changed 9 atom styles  

> select clear

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Salhel_SoxOct_Can_Zoom.png" width 2000 height
> 1062 supersample 3

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Salhel_CAN.cxs"

> close session

> open "C:\Users\daisy\OneDrive\OneDrive - connect.hku.hk\My
> drive\HKU\PHD\Experiments_2023\Structural
> Modelling\Modeller\canonical\PDBs\Salhel_SOX\uniSox_Salhel_Soxa_mOct4.B99990201.pdb"
> format pdb

Chain information for uniSox_Salhel_Soxa_mOct4.B99990201.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
C | No description available  
D | No description available  
  

> close session

> open "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/Experiments_2023/Structural
> Modelling/Modeller/canonical/PDBs/Pchi_SOX/1_uniSox_Pchi_mOct4.B99990048.pdb"

Chain information for 1_uniSox_Pchi_mOct4.B99990048.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
C | No description available  
D | No description available  
  

> nucleotides ladder

> select ::name="DA"::name="DC"::name="DG"::name="DT"

2009 atoms, 2252 bonds, 98 residues, 1 model selected  

> color sel dim gray

> select clear

> select up

136 atoms, 138 bonds, 16 residues, 1 model selected  

> select up

701 atoms, 720 bonds, 83 residues, 1 model selected  

> ui tool show "Color Actions"

> color sel #ccccbbff

> color sel #444477ff

> color sel #4477aaff

> color sel #dd5555ff

> color sel #d55e00ff

> select clear

> select up

185 atoms, 185 bonds, 22 residues, 1 model selected  

> select up

1350 atoms, 1367 bonds, 164 residues, 1 model selected  

> select clear

> select clear

> select /B:233

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select up

136 atoms, 138 bonds, 16 residues, 1 model selected  

> select up

701 atoms, 720 bonds, 83 residues, 1 model selected  

> color sel #ccbb44ff

> color sel #4477aaff

> select clear

> select /A:16

11 atoms, 11 bonds, 1 residue, 1 model selected  

> select up

185 atoms, 185 bonds, 22 residues, 1 model selected  

> select up

1350 atoms, 1367 bonds, 164 residues, 1 model selected  

> color sel #d55e00ff

> select clear

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Pchi_SoxOct_Can.png" width 629 height 334
> supersample 3

Alignment identifier is 1/A  
Alignment identifier is 1/B  
Alignment identifier is 1/C  
Alignment identifier is 1/D  

QWindowsWindow::setGeometry: Unable to set geometry 328x55+1306-89 (frame:
344x94+1298-120) on QWidgetWindow/"QDockWidgetClassWindow" on
"\\\\.\DISPLAY1". Resulting geometry: 217x42+1303-103 (frame: 233x81+1295-134)
margins: 8, 31, 8, 8 minimum size: 55x33 maximum size: 524287x524287
MINMAXINFO maxSize=0,0 maxpos=0,0 mintrack=126,105 maxtrack=1048590,1048613)  

> show sel atoms

> color sel byhetero

> style sel ball

Changed 42 atom styles  

> color sel cyan

> color sel byhetero

> select clear

QWindowsWindow::setGeometry: Unable to set geometry 164x39+1439-176 (frame:
180x78+1431-207) on QWidgetWindow/"QDockWidgetClassWindow" on
"\\\\.\DISPLAY1". Resulting geometry: 108x42+1436-190 (frame: 124x81+1428-221)
margins: 8, 31, 8, 8 minimum size: 55x33 maximum size: 524287x524287
MINMAXINFO maxSize=0,0 maxpos=0,0 mintrack=126,105 maxtrack=1048590,1048613)  

QWindowsWindow::setGeometry: Unable to set geometry 108x42+1422-184 (frame:
124x81+1414-215) on QWidgetWindow/"QDockWidgetClassWindow" on
"\\\\.\DISPLAY1". Resulting geometry: 110x66+1422-184 (frame:
126x105+1414-215) margins: 8, 31, 8, 8 minimum size: 55x33 maximum size:
524287x524287 MINMAXINFO maxSize=0,0 maxpos=0,0 mintrack=126,105
maxtrack=1048590,1048613)  

> show sel atoms

> color sel cyan

> style sel ball

Changed 36 atom styles  

> color sel byhetero

> select clear

> select /A:22

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select clear

> select clear

> select up

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select clear

> select /A:89@NZ

1 atom, 1 residue, 1 model selected  

> ui tool show Distances

> distance /A:89@NZ /B:225@NE2

Distance between /A LYS 89 NZ and /B GLN 225 NE2: 10.325Å  

> undo

Must select one or more distances in the table  

> ~distance /A:89@NZ /B:225@NE2

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Pchi_SoxOct_Can_Zoom.png" width 613 height 334
> supersample 3

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Pchi_SoxOct_Can_Zoom.png" width 2000 height
> 1090 supersample 3

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Pchi_CAN.cxs"

opened ChimeraX session  

> show sel atoms

Alignment identifier is 1/B  

QWindowsWindow::setGeometry: Unable to set geometry 290x54+1196-62 (frame:
306x93+1188-93) on QWidgetWindow/"QDockWidgetClassWindow" on "\\\\.\DISPLAY1".
Resulting geometry: 192x42+1193-76 (frame: 208x81+1185-107) margins: 8, 31, 8,
8 minimum size: 55x33 maximum size: 524287x524287 MINMAXINFO maxSize=0,0
maxpos=0,0 mintrack=126,105 maxtrack=1048590,1048613)  

> select clear

> style sel ball

Changed 9 atom styles  

> color sel cyan

> color sel byhetero

> select clear

> select clear

> save "C:/Users/daisy/OneDrive/OneDrive - connect.hku.hk/My
> drive/HKU/PHD/uniCell/Models/Pchi_CAN.cxs"

opened ChimeraX session  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\core\triggerset.py", line 130, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\ui\widgets\item_chooser.py", line 305, in _items_change  
if not hasattr(self, '_recursion'):  
RuntimeError: wrapped C/C++ object of type ChainMenuButton has been deleted  
  
Error processing trigger "changes":  
RuntimeError: wrapped C/C++ object of type ChainMenuButton has been deleted  
  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\ui\widgets\item_chooser.py", line 305, in _items_change  
if not hasattr(self, '_recursion'):  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\core\triggerset.py", line 130, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\ui\widgets\item_chooser.py", line 305, in _items_change  
if not hasattr(self, '_recursion'):  
RuntimeError: wrapped C/C++ object of type ChainMenuButton has been deleted  
  
Error processing trigger "changes":  
RuntimeError: wrapped C/C++ object of type ChainMenuButton has been deleted  
  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\ui\widgets\item_chooser.py", line 305, in _items_change  
if not hasattr(self, '_recursion'):  
  
See log for complete Python traceback.  
  

> select /B:225

9 atoms, 8 bonds, 1 residue, 1 model selected  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\core\triggerset.py", line 130, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\ui\widgets\item_chooser.py", line 305, in _items_change  
if not hasattr(self, '_recursion'):  
RuntimeError: wrapped C/C++ object of type ChainMenuButton has been deleted  
  
Error processing trigger "changes":  
RuntimeError: wrapped C/C++ object of type ChainMenuButton has been deleted  
  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\ui\widgets\item_chooser.py", line 305, in _items_change  
if not hasattr(self, '_recursion'):  
  
See log for complete Python traceback.  
  

> select /B:218@CA

1 atom, 1 residue, 1 model selected  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\core\triggerset.py", line 130, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\ui\widgets\item_chooser.py", line 305, in _items_change  
if not hasattr(self, '_recursion'):  
RuntimeError: wrapped C/C++ object of type ChainMenuButton has been deleted  
  
Error processing trigger "changes":  
RuntimeError: wrapped C/C++ object of type ChainMenuButton has been deleted  
  
File "C:\Program Files\ChimeraX 1.1\bin\lib\site-
packages\chimerax\ui\widgets\item_chooser.py", line 305, in _items_change  
if not hasattr(self, '_recursion'):  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 Core Profile Context 23.10.24.05.230830
OpenGL renderer: AMD Radeon(TM) Graphics
OpenGL vendor: ATI Technologies Inc.
Manufacturer: LENOVO
Model: 20UDCTO1WW
OS: Microsoft Windows 11 Home (Build 22631)
Memory: 33,528,926,208
MaxProcessMemory: 137,438,953,344
CPU: 12 AMD Ryzen 5 PRO 4650U with Radeon Graphics"
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.8.0
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2020.6.20
    chardet: 3.0.4
    ChimeraX-AddH: 2.1.3
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.1
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.6.1
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 1.0.1
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.0
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.0
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.1
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.0
    ChimeraX-Clipper: 0.15.0
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-CommandLine: 1.1.3
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.1
    ChimeraX-CoreFormats: 1.0
    ChimeraX-coulombic: 1.0.1
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-DataFormats: 1.0
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.0
    ChimeraX-Hbonds: 2.0
    ChimeraX-Help: 1.0
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.0
    ChimeraX-ImageFormats: 1.0
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0
    ChimeraX-Label: 1.0
    ChimeraX-ListInfo: 1.0
    ChimeraX-Log: 1.1.1
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Map: 1.0.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.0
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 1.1
    ChimeraX-MDcrds: 2.0
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.0
    ChimeraX-mmCIF: 2.2
    ChimeraX-MMTF: 2.0
    ChimeraX-Modeller: 1.0
    ChimeraX-ModelPanel: 1.0
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.0
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0
    ChimeraX-OpenCommand: 1.2.1
    ChimeraX-PDB: 2.1
    ChimeraX-PDBBio: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0
    ChimeraX-PubChem: 2.0
    ChimeraX-Read-Pbonds: 1.0
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.0
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.2
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SeqView: 2.2
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.0
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.0
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.0.4
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.0
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.0
    ChimeraX-ToolshedUtils: 1.0
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.2.3
    ChimeraX-uniprot: 2.0
    ChimeraX-ViewDockX: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.3
    comtypes: 1.1.7
    cxservices: 1.0
    cycler: 0.10.0
    Cython: 0.29.20
    decorator: 4.4.2
    distlib: 0.3.1
    docutils: 0.16
    filelock: 3.0.12
    funcparserlib: 0.3.6
    gdcm: 2.8.8
    grako: 3.16.5
    h5py: 2.10.0
    html2text: 2020.1.16
    idna: 2.10
    ihm: 0.16
    imagecodecs: 2020.5.30
    imagecodecs-lite: 2020.1.31
    imagesize: 1.2.0
    ipykernel: 5.3.0
    ipython: 7.15.0
    ipython-genutils: 0.2.0
    jedi: 0.17.2
    Jinja2: 2.11.2
    jupyter-client: 6.1.3
    jupyter-core: 4.6.3
    kiwisolver: 1.2.0
    line-profiler: 2.1.2
    lxml: 4.5.1
    MarkupSafe: 1.1.1
    matplotlib: 3.2.1
    msgpack: 1.0.0
    netifaces: 0.10.9
    networkx: 2.4
    numexpr: 2.7.1
    numpy: 1.18.5+mkl
    numpydoc: 1.0.0
    openvr: 1.12.501
    packaging: 20.4
    parso: 0.7.1
    pickleshare: 0.7.5
    Pillow: 7.1.2
    pip: 20.2.2
    pkginfo: 1.5.0.1
    prompt-toolkit: 3.0.7
    psutil: 5.7.0
    pycollada: 0.7.1
    pydicom: 2.0.0
    Pygments: 2.6.1
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 2.4.7
    PyQt5-commercial: 5.12.3
    PyQt5-sip: 4.19.19
    PyQtWebEngine-commercial: 5.12.1
    python-dateutil: 2.8.1
    pytz: 2020.1
    pywin32: 228
    pyzmq: 19.0.2
    qtconsole: 4.7.4
    QtPy: 1.9.0
    RandomWords: 0.3.0
    requests: 2.24.0
    scipy: 1.4.1
    setuptools: 49.4.0
    sfftk-rw: 0.6.6.dev0
    six: 1.15.0
    snowballstemmer: 2.0.0
    sortedcontainers: 2.2.2
    Sphinx: 3.1.1
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 1.0.3
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.4
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2020.6.3
    tinyarray: 1.2.2
    tornado: 6.0.4
    traitlets: 5.0.4
    urllib3: 1.25.10
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.34.2
    WMI: 1.5.1

Change History (2)

comment:1 by Eric Pettersen, 18 months ago

Component:	Unassigned → UI
Owner:	set to Eric Pettersen
Platform:	→ all
Project:	→ ChimeraX
Status:	new → accepted
Summary:	ChimeraX bug report submission → wrapped C/C++ object of type ChainMenuButton has been deleted

comment:2 by Eric Pettersen, 18 months ago

Resolution:	→ duplicate
Status:	accepted → closed

Long ago fixed

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