The following bug report has been submitted:
Platform: Darwin-18.2.0-x86_64-i386-64bit
ChimeraX Version: 0.8 (2018-11-11)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [67787]
Path: /Applications/ChimeraX.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 0.8.0 (0.8.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [67787]
User ID: 505
Date/Time: 2018-11-13 14:56:42.288 +0100
OS Version: Mac OS X 10.14 (18A391)
Report Version: 12
Anonymous UUID: E612D892-4D19-1B53-2D97-DA0F40D712EE
Sleep/Wake UUID: 5AC86A8D-F9BD-403A-9AFF-A2EE8F259FEE
Time Awake Since Boot: 300000 seconds
Time Since Wake: 6300 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x0000000000000008
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x8:
-->
__TEXT 000000010bc26000-000000010bc27000 [ 4K] r-x/rwx SM=COW /Applications/ChimeraX.app/Contents/MacOS/ChimeraX
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff718eab86 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff719a0c50 pthread_kill + 285
2 libsystem_c.dylib 0x00007fff71807096 raise + 26
3 libsystem_platform.dylib 0x00007fff71995b3d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 libmolc.dylib 0x0000000137e58084 isolde::MDFF_Mgr::destructors_done(std::__1::set, std::__1::allocator > const&) + 404
6 libmolc.dylib 0x0000000137e14f17 atomstruct::DestructionCoordinator::finalizing_destruction(void*) + 807
7 libmolc.dylib 0x0000000137e58261 isolde::MDFF_Mgr::~MDFF_Mgr() + 353
8 libmolc.dylib 0x0000000137e583de isolde::MDFF_Mgr::~MDFF_Mgr() + 14
9 _ctypes.cpython-36m-darwin.so 0x0000000117059f5f ffi_call_unix64 + 79
10 _ctypes.cpython-36m-darwin.so 0x000000011705a7ba ffi_call + 858
11 _ctypes.cpython-36m-darwin.so 0x0000000117055943 _ctypes_callproc + 787
12 _ctypes.cpython-36m-darwin.so 0x000000011704f739 PyCFuncPtr_call + 1049
13 org.python.python 0x000000010bc3d2a4 _PyObject_FastCallDict + 292
14 org.python.python 0x000000010bd0f30b call_function + 427
15 org.python.python 0x000000010bd0825c _PyEval_EvalFrameDefault + 4988
16 org.python.python 0x000000010bd0fe20 _PyEval_EvalCodeWithName + 2592
17 org.python.python 0x000000010bd104b2 fast_function + 386
18 org.python.python 0x000000010bd0f312 call_function + 434
19 org.python.python 0x000000010bd0825c _PyEval_EvalFrameDefault + 4988
20 org.python.python 0x000000010bd1052f fast_function + 511
21 org.python.python 0x000000010bd0f312 call_function + 434
22 org.python.python 0x000000010bd0825c _PyEval_EvalFrameDefault + 4988
23 org.python.python 0x000000010bd0fe20 _PyEval_EvalCodeWithName + 2592
24 org.python.python 0x000000010bd06e97 PyEval_EvalCodeEx + 55
25 org.python.python 0x000000010bc6527e function_call + 350
26 org.python.python 0x000000010bc3d035 PyObject_Call + 101
27 org.python.python 0x000000010bd084e3 _PyEval_EvalFrameDefault + 5635
28 org.python.python 0x000000010bd0fe20 _PyEval_EvalCodeWithName + 2592
29 org.python.python 0x000000010bd104b2 fast_function + 386
30 org.python.python 0x000000010bd0f312 call_function + 434
31 org.python.python 0x000000010bd082ee _PyEval_EvalFrameDefault + 5134
32 org.python.python 0x000000010bd0fe20 _PyEval_EvalCodeWithName + 2592
33 org.python.python 0x000000010bd104b2 fast_function + 386
34 org.python.python 0x000000010bd0f312 call_function + 434
35 org.python.python 0x000000010bd0825c _PyEval_EvalFrameDefault + 4988
36 org.python.python 0x000000010bd0fe20 _PyEval_EvalCodeWithName + 2592
37 org.python.python 0x000000010bd104b2 fast_function + 386
38 org.python.python 0x000000010bd0f312 call_function + 434
39 org.python.python 0x000000010bd0825c _PyEval_EvalFrameDefault + 4988
40 org.python.python 0x000000010bd0fe20 _PyEval_EvalCodeWithName + 2592
41 org.python.python 0x000000010bd06e97 PyEval_EvalCodeEx + 55
42 org.python.python 0x000000010bc6527e function_call + 350
43 org.python.python 0x000000010bc3d035 PyObject_Call + 101
44 QtCore.so 0x0000000119db1828 PyQtSlot::call(_object*, _object*) const + 40
45 QtCore.so 0x0000000119db1727 PyQtSlot::invoke(void**, _object*, void*, bool) const + 391
46 QtCore.so 0x0000000119db2268 PyQtSlotProxy::unislot(void**) + 88
47 QtCore.so 0x0000000119db21da PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
48 QtCore 0x00000001199193d6 QMetaObject::activate(QObject*, int, int, void**) + 2230
49 QtWidgets 0x0000000118d5f65f 0x118c54000 + 1095263
50 QtWidgets 0x0000000118d5f4f2 0x118c54000 + 1094898
51 QtWidgets 0x0000000118d6075f QAbstractButton::mouseReleaseEvent(QMouseEvent*) + 271
52 QtWidgets.so 0x000000011881af58 sipQPushButton::mouseReleaseEvent(QMouseEvent*) + 120
53 QtWidgets 0x0000000118c9fca0 QWidget::event(QEvent*) + 496
54 QtWidgets 0x0000000118d602c1 QAbstractButton::event(QEvent*) + 145
55 QtWidgets.so 0x000000011881b870 sipQPushButton::event(QEvent*) + 192
56 QtWidgets 0x0000000118c65b82 QApplicationPrivate::notify_helper(QObject*, QEvent*) + 306
57 QtWidgets 0x0000000118c6891d QApplication::notify(QObject*, QEvent*) + 7165
58 QtWidgets.so 0x0000000118837f8a sipQApplication::notify(QObject*, QEvent*) + 234
59 QtCore 0x00000001198e8a7f QCoreApplication::notifyInternal2(QObject*, QEvent*) + 159
60 QtWidgets 0x0000000118c664b0 QApplicationPrivate::sendMouseEvent(QWidget*, QMouseEvent*, QWidget*, QWidget*, QWidget**, QPointer&, bool) + 896
61 QtWidgets 0x0000000118cbffec 0x118c54000 + 442348
62 QtWidgets 0x0000000118cbec49 0x118c54000 + 437321
63 QtWidgets 0x0000000118c65b82 QApplicationPrivate::notify_helper(QObject*, QEvent*) + 306
64 QtWidgets 0x0000000118c66e9f QApplication::notify(QObject*, QEvent*) + 383
65 QtWidgets.so 0x0000000118837f8a sipQApplication::notify(QObject*, QEvent*) + 234
66 QtCore 0x00000001198e8a7f QCoreApplication::notifyInternal2(QObject*, QEvent*) + 159
67 QtGui 0x0000000119231152 QGuiApplicationPrivate::processMouseEvent(QWindowSystemInterfacePrivate::MouseEvent*) + 2962
68 QtGui 0x000000011921728b QWindowSystemInterface::sendWindowSystemEvents(QFlags) + 155
69 libqcocoa.dylib 0x0000000121e99741 0x121e71000 + 165697
70 com.apple.CoreFoundation 0x00007fff44734405 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
71 com.apple.CoreFoundation 0x00007fff447343ab __CFRunLoopDoSource0 + 108
72 com.apple.CoreFoundation 0x00007fff44717e51 __CFRunLoopDoSources0 + 195
73 com.apple.CoreFoundation 0x00007fff447173fa __CFRunLoopRun + 1219
74 com.apple.CoreFoundation 0x00007fff44716ce4 CFRunLoopRunSpecific + 463
75 com.apple.HIToolbox 0x00007fff439b0895 RunCurrentEventLoopInMode + 293
76 com.apple.HIToolbox 0x00007fff439b04d4 ReceiveNextEventCommon + 371
77 com.apple.HIToolbox 0x00007fff439b0348 _BlockUntilNextEventMatchingListInModeWithFilter + 64
78 com.apple.AppKit 0x00007fff41c6d95b _DPSNextEvent + 997
79 com.apple.AppKit 0x00007fff41c6c6fa -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1362
80 com.apple.AppKit 0x00007fff41c6675d -[NSApplication run] + 699
81 libqcocoa.dylib 0x0000000121e9853d 0x121e71000 + 161085
82 QtCore 0x00000001198e4742 QEventLoop::exec(QFlags) + 418
83 QtCore 0x00000001198e9172 QCoreApplication::exec() + 402
84 QtWidgets.so 0x0000000118925dc2 meth_QApplication_exec_(_object*, _object*) + 82
85 org.python.python 0x000000010bc85b06 _PyCFunction_FastCallDict + 166
86 org.python.python 0x000000010bd0f337 call_function + 471
87 org.python.python 0x000000010bd0825c _PyEval_EvalFrameDefault + 4988
88 org.python.python 0x000000010bd1052f fast_function + 511
89 org.python.python 0x000000010bd0f312 call_function + 434
90 org.python.python 0x000000010bd0825c _PyEval_EvalFrameDefault + 4988
91 org.python.python 0x000000010bd0fe20 _PyEval_EvalCodeWithName + 2592
92 org.python.python 0x000000010bd104b2 fast_function + 386
93 org.python.python 0x000000010bd0f312 call_function + 434
94 org.python.python 0x000000010bd0825c _PyEval_EvalFrameDefault + 4988
95 org.python.python 0x000000010bd0fe20 _PyEval_EvalCodeWithName + 2592
96 org.python.python 0x000000010bd06e50 PyEval_EvalCode + 48
97 org.python.python 0x000000010bd0463b builtin_exec + 555
98 org.python.python 0x000000010bc85b06 _PyCFunction_FastCallDict + 166
99 org.python.python 0x000000010bd0f337 call_function + 471
100 org.python.python 0x000000010bd0825c _PyEval_EvalFrameDefault + 4988
101 org.python.python 0x000000010bd0fe20 _PyEval_EvalCodeWithName + 2592
102 org.python.python 0x000000010bd104b2 fast_function + 386
103 org.python.python 0x000000010bd0f312 call_function + 434
104 org.python.python 0x000000010bd0825c _PyEval_EvalFrameDefault + 4988
105 org.python.python 0x000000010bd0fe20 _PyEval_EvalCodeWithName + 2592
106 org.python.python 0x000000010bd06e97 PyEval_EvalCodeEx + 55
107 org.python.python 0x000000010bc6527e function_call + 350
108 org.python.python 0x000000010bc3d035 PyObject_Call + 101
109 org.python.python 0x000000010bd55b53 RunModule + 147
110 org.python.python 0x000000010bd553ec Py_Main + 2588
111 edu.ucsf.cgl.ChimeraX 0x000000010bc26e16 main + 278
112 libdyld.dylib 0x00007fff717ac085 start + 1
Thread 1:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff718e4c2a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff718e5174 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4471805e __CFRunLoopServiceMachPort + 337
3 com.apple.CoreFoundation 0x00007fff447175ad __CFRunLoopRun + 1654
4 com.apple.CoreFoundation 0x00007fff44716ce4 CFRunLoopRunSpecific + 463
5 com.apple.AppKit 0x00007fff41c76581 _NSEventThread + 160
6 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
8 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 2:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff718ecb8e poll + 10
1 QtCore 0x000000011993bb40 qt_safe_poll(pollfd*, unsigned int, timespec const*) + 544
2 QtCore 0x000000011993d1b9 QEventDispatcherUNIX::processEvents(QFlags) + 857
3 QtCore 0x00000001198e4742 QEventLoop::exec(QFlags) + 418
4 QtWebEngineCore 0x000000011a43ec4a 0x11a41d000 + 138314
5 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
6 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
7 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
8 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
9 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
10 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
11 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 3:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff718eb052 kevent + 10
1 QtWebEngineCore 0x000000011b54b469 0x11a41d000 + 18015337
2 QtWebEngineCore 0x000000011b54875d 0x11a41d000 + 18003805
3 QtWebEngineCore 0x000000011b03c99f 0x11a41d000 + 12712351
4 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
5 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
6 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
7 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
8 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
10 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 4:: Chrome_DBThread
0 libsystem_kernel.dylib 0x00007fff718e4c2a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff718e5174 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4471805e __CFRunLoopServiceMachPort + 337
3 com.apple.CoreFoundation 0x00007fff447175ad __CFRunLoopRun + 1654
4 com.apple.CoreFoundation 0x00007fff44716ce4 CFRunLoopRunSpecific + 463
5 QtWebEngineCore 0x000000011b03d90f 0x11a41d000 + 12716303
6 QtWebEngineCore 0x000000011b03d2a4 0x11a41d000 + 12714660
7 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
8 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
9 QtWebEngineCore 0x000000011a70a958 0x11a41d000 + 3070296
10 QtWebEngineCore 0x000000011a70ad1f 0x11a41d000 + 3071263
11 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
12 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
13 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
14 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
15 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 5:: Chrome_FileThread
0 libsystem_kernel.dylib 0x00007fff718eb052 kevent + 10
1 QtWebEngineCore 0x000000011b54b469 0x11a41d000 + 18015337
2 QtWebEngineCore 0x000000011b54875d 0x11a41d000 + 18003805
3 QtWebEngineCore 0x000000011b03c99f 0x11a41d000 + 12712351
4 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
5 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
6 QtWebEngineCore 0x000000011a70a9d8 0x11a41d000 + 3070424
7 QtWebEngineCore 0x000000011a70ad2f 0x11a41d000 + 3071279
8 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
9 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
10 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
11 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
12 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 6:: Chrome_FileUserBlockingThread
0 libsystem_kernel.dylib 0x00007fff718e4c2a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff718e5174 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4471805e __CFRunLoopServiceMachPort + 337
3 com.apple.CoreFoundation 0x00007fff447175ad __CFRunLoopRun + 1654
4 com.apple.CoreFoundation 0x00007fff44716ce4 CFRunLoopRunSpecific + 463
5 QtWebEngineCore 0x000000011b03d90f 0x11a41d000 + 12716303
6 QtWebEngineCore 0x000000011b03d2a4 0x11a41d000 + 12714660
7 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
8 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
9 QtWebEngineCore 0x000000011a70aa58 0x11a41d000 + 3070552
10 QtWebEngineCore 0x000000011a70ad3f 0x11a41d000 + 3071295
11 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
12 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
13 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
14 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
15 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 7:: Chrome_ProcessLauncherThread
0 libsystem_kernel.dylib 0x00007fff718e4c2a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff718e5174 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4471805e __CFRunLoopServiceMachPort + 337
3 com.apple.CoreFoundation 0x00007fff447175ad __CFRunLoopRun + 1654
4 com.apple.CoreFoundation 0x00007fff44716ce4 CFRunLoopRunSpecific + 463
5 QtWebEngineCore 0x000000011b03d90f 0x11a41d000 + 12716303
6 QtWebEngineCore 0x000000011b03d2a4 0x11a41d000 + 12714660
7 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
8 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
9 QtWebEngineCore 0x000000011a70aad8 0x11a41d000 + 3070680
10 QtWebEngineCore 0x000000011a70ad4c 0x11a41d000 + 3071308
11 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
12 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
13 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
14 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
15 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 8:: Chrome_CacheThread
0 libsystem_kernel.dylib 0x00007fff718e4c2a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff718e5174 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4471805e __CFRunLoopServiceMachPort + 337
3 com.apple.CoreFoundation 0x00007fff447175ad __CFRunLoopRun + 1654
4 com.apple.CoreFoundation 0x00007fff44716ce4 CFRunLoopRunSpecific + 463
5 QtWebEngineCore 0x000000011b03d90f 0x11a41d000 + 12716303
6 QtWebEngineCore 0x000000011b03d2a4 0x11a41d000 + 12714660
7 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
8 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
9 QtWebEngineCore 0x000000011a70ab58 0x11a41d000 + 3070808
10 QtWebEngineCore 0x000000011a70ad59 0x11a41d000 + 3071321
11 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
12 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
13 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
14 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
15 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 9:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff718eb052 kevent + 10
1 QtWebEngineCore 0x000000011b54b469 0x11a41d000 + 18015337
2 QtWebEngineCore 0x000000011b54875d 0x11a41d000 + 18003805
3 QtWebEngineCore 0x000000011b03c99f 0x11a41d000 + 12712351
4 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
5 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
6 QtWebEngineCore 0x000000011a70abd8 0x11a41d000 + 3070936
7 QtWebEngineCore 0x000000011a70ad66 0x11a41d000 + 3071334
8 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
9 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
10 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
11 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
12 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 10:: BrowserBlockingWorker1/55811
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 QtWebEngineCore 0x000000011b08cc1f 0x11a41d000 + 13040671
3 QtWebEngineCore 0x000000011b08c2e6 0x11a41d000 + 13038310
4 QtWebEngineCore 0x000000011b09018d 0x11a41d000 + 13054349
5 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
6 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
8 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 11:: IndexedDB
0 libsystem_kernel.dylib 0x00007fff718e4c2a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff718e5174 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4471805e __CFRunLoopServiceMachPort + 337
3 com.apple.CoreFoundation 0x00007fff447175ad __CFRunLoopRun + 1654
4 com.apple.CoreFoundation 0x00007fff44716ce4 CFRunLoopRunSpecific + 463
5 QtWebEngineCore 0x000000011b03d90f 0x11a41d000 + 12716303
6 QtWebEngineCore 0x000000011b03d2a4 0x11a41d000 + 12714660
7 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
8 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
9 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
10 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
11 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
12 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
13 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 12:: CompositorTileWorker1/57603
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 QtWebEngineCore 0x000000011bc2bcf8 0x11a41d000 + 25226488
3 QtWebEngineCore 0x000000011b09018d 0x11a41d000 + 13054349
4 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
5 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
6 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
7 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 13:: AudioThread
0 libsystem_kernel.dylib 0x00007fff718e4c2a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff718e5174 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4471805e __CFRunLoopServiceMachPort + 337
3 com.apple.CoreFoundation 0x00007fff447175ad __CFRunLoopRun + 1654
4 com.apple.CoreFoundation 0x00007fff44716ce4 CFRunLoopRunSpecific + 463
5 QtWebEngineCore 0x000000011b03d90f 0x11a41d000 + 12716303
6 QtWebEngineCore 0x000000011b03d2a4 0x11a41d000 + 12714660
7 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
8 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
9 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
10 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
11 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
12 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
13 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 14:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff718e4c2a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff718e5174 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4471805e __CFRunLoopServiceMachPort + 337
3 com.apple.CoreFoundation 0x00007fff447175ad __CFRunLoopRun + 1654
4 com.apple.CoreFoundation 0x00007fff44716ce4 CFRunLoopRunSpecific + 463
5 QtWebEngineCore 0x000000011b03d90f 0x11a41d000 + 12716303
6 QtWebEngineCore 0x000000011b03d2a4 0x11a41d000 + 12714660
7 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
8 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
9 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
10 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
11 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
12 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
13 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 15:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff718eb052 kevent + 10
1 QtWebEngineCore 0x000000011b54b469 0x11a41d000 + 18015337
2 QtWebEngineCore 0x000000011b54875d 0x11a41d000 + 18003805
3 QtWebEngineCore 0x000000011b03c99f 0x11a41d000 + 12712351
4 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
5 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
6 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
7 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
8 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
10 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 16:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff718ecb8e poll + 10
1 QtCore 0x000000011993bb40 qt_safe_poll(pollfd*, unsigned int, timespec const*) + 544
2 QtCore 0x000000011993d1b9 QEventDispatcherUNIX::processEvents(QFlags) + 857
3 QtCore 0x00000001198e4742 QEventLoop::exec(QFlags) + 418
4 QtWebEngineCore 0x000000011a43ec4a 0x11a41d000 + 138314
5 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
6 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
7 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
8 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
9 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
10 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
11 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 17:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff718ecb8e poll + 10
1 QtCore 0x000000011993bb40 qt_safe_poll(pollfd*, unsigned int, timespec const*) + 544
2 QtCore 0x000000011993d1b9 QEventDispatcherUNIX::processEvents(QFlags) + 857
3 QtCore 0x00000001198e4742 QEventLoop::exec(QFlags) + 418
4 QtWebEngineCore 0x000000011a43ec4a 0x11a41d000 + 138314
5 QtWebEngineCore 0x000000011b03a10e 0x11a41d000 + 12701966
6 QtWebEngineCore 0x000000011b05e531 0x11a41d000 + 12850481
7 QtWebEngineCore 0x000000011b09236b 0x11a41d000 + 13063019
8 QtWebEngineCore 0x000000011b08b667 0x11a41d000 + 13035111
9 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
10 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
11 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 18:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libopenblasp-r0.3.0.dev.dylib 0x000000010ca9e72b blas_thread_server + 187
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 19:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libopenblasp-r0.3.0.dev.dylib 0x000000010ca9e72b blas_thread_server + 187
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 20:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libopenblasp-r0.3.0.dev.dylib 0x000000010ca9e72b blas_thread_server + 187
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 21:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 22:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 23:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 24:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 25:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 26:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 27:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 28:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 29:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMMOpenCL.dylib 0x0000000133ab7b9d threadBody(void*) + 109
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 30:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 31:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 32:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 33:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 34:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 35:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 36:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 37:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMM.dylib 0x000000013379d69f OpenMM::threadBody(void*) + 207
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 38:
0 libsystem_kernel.dylib 0x00007fff718e81b2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff719a15cb _pthread_cond_wait + 724
2 libOpenMMOpenCL.dylib 0x0000000133ab7b9d threadBody(void*) + 109
3 libsystem_pthread.dylib 0x00007fff7199e33d _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff719a12a7 _pthread_start + 70
5 libsystem_pthread.dylib 0x00007fff7199d425 thread_start + 13
Thread 39:
0 libsystem_pthread.dylib 0x00007fff7199d408 start_wqthread + 0
1 ??? 0x0000000054485244 0 + 1414025796
Thread 40:
0 libsystem_pthread.dylib 0x00007fff7199d408 start_wqthread + 0
1 ??? 0x0000000054485244 0 + 1414025796
Thread 41:
0 libsystem_pthread.dylib 0x00007fff7199d408 start_wqthread + 0
1 ??? 0x0000000054485244 0 + 1414025796
Thread 42:
0 libsystem_pthread.dylib 0x00007fff7199d408 start_wqthread + 0
1 ??? 0x0000000054485244 0 + 1414025796
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000117f1d5c0 rcx: 0x000000010c031a48 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x000000010c031a80 rsp: 0x000000010c031a48
r8: 0x000000010c031f48 r9: 0x66e7e0266e7a9591 r10: 0x0000000117f1d66c r11: 0x0000000000000287
r12: 0x0000000000000307 r13: 0x000060000185c0f0 r14: 0x000000000000000b r15: 0x000000000000002d
rip: 0x00007fff718eab86 rfl: 0x0000000000000286 cr2: 0x000000010be76060
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x10c325000 - 0x10c329ff7 +libqsvg.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/PyQt5/Qt/plugins/imageformats/libqsvg.dylib
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0x10c446000 - 0x10c446fff +_bisect.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_bisect.cpython-36m-darwin.so
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0x10c454000 - 0x10c48fff7 +libqjpeg.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/PyQt5/Qt/plugins/imageformats/libqjpeg.dylib
0x10c49a000 - 0x10c49affb +_mac_util.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/core/_mac_util.so
0x10c4fe000 - 0x10c699ff7 +multiarray.cpython-36m-darwin.so (???) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/core/multiarray.cpython-36m-darwin.so
0x10c771000 - 0x1108f45a7 +libopenblasp-r0.3.0.dev.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/numpy/.dylibs/libopenblasp-r0.3.0.dev.dylib
0x110c67000 - 0x110d7eff7 +libgfortran.3.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/numpy/.dylibs/libgfortran.3.dylib
0x110de2000 - 0x110e18fff +libquadmath.0.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/numpy/.dylibs/libquadmath.0.dylib
0x110e27000 - 0x110e3cff7 +libgcc_s.1.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/numpy/.dylibs/libgcc_s.1.dylib
0x116e88000 - 0x116e94fff +_datetime.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_datetime.cpython-36m-darwin.so
0x116e9f000 - 0x116f8cfff +umath.cpython-36m-darwin.so (???) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/core/umath.cpython-36m-darwin.so
0x11704c000 - 0x11705dff7 +_ctypes.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_ctypes.cpython-36m-darwin.so
0x11706e000 - 0x117072ff7 +_struct.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_struct.cpython-36m-darwin.so
0x1170bc000 - 0x1170ceff7 +_pickle.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_pickle.cpython-36m-darwin.so
0x11732b000 - 0x11732eff7 +zlib.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/zlib.cpython-36m-darwin.so
0x117334000 - 0x117348ff7 +libz.1.2.11.dylib (0) /Applications/ChimeraX.app/Contents/lib/libz.1.2.11.dylib
0x11734c000 - 0x11734dffb +_bz2.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_bz2.cpython-36m-darwin.so
0x117351000 - 0x117351ff7 +grp.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/grp.cpython-36m-darwin.so
0x117354000 - 0x117356fff +_hashlib.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_hashlib.cpython-36m-darwin.so
0x11735b000 - 0x11739ffff +libssl.1.0.0.dylib (0) /Applications/ChimeraX.app/Contents/lib/libssl.1.0.0.dylib
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0x118489000 - 0x1184a0fff +_geometry.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/core/geometry/_geometry.so
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0x1186f6000 - 0x118978ffb +QtWidgets.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/PyQt5/QtWidgets.so
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0x7fff67cc4000 - 0x7fff67cdaff3 com.apple.QuickLookThumbnailing (1.0 - 1) /System/Library/PrivateFrameworks/QuickLookThumbnailing.framework/Versions/A/QuickLookThumbnailing
0x7fff67cdb000 - 0x7fff67d33f0f com.apple.ROCKit (24 - 24) /System/Library/PrivateFrameworks/ROCKit.framework/Versions/A/ROCKit
0x7fff67df4000 - 0x7fff67e00ff3 com.apple.xpc.RemoteServiceDiscovery (1.0 - 1336.201.2) /System/Library/PrivateFrameworks/RemoteServiceDiscovery.framework/Versions/A/RemoteServiceDiscovery
0x7fff67e13000 - 0x7fff67e36ffb com.apple.RemoteViewServices (2.0 - 128) /System/Library/PrivateFrameworks/RemoteViewServices.framework/Versions/A/RemoteViewServices
0x7fff67e37000 - 0x7fff67e4bfff com.apple.xpc.RemoteXPC (1.0 - 1336.201.2) /System/Library/PrivateFrameworks/RemoteXPC.framework/Versions/A/RemoteXPC
0x7fff69797000 - 0x7fff6979fffb com.apple.coreservices.SharePointManager (1.0 - 57.1) /System/Library/PrivateFrameworks/SharePointManagement.framework/Versions/A/SharePointManagement
0x7fff697a4000 - 0x7fff698c3fff com.apple.Sharing (1176.11 - 1176.11) /System/Library/PrivateFrameworks/Sharing.framework/Versions/A/Sharing
0x7fff698c4000 - 0x7fff698e3ff3 com.apple.shortcut (2.16 - 101) /System/Library/PrivateFrameworks/Shortcut.framework/Versions/A/Shortcut
0x7fff698e4000 - 0x7fff698f6ff7 com.apple.sidecar-core (1.0 - 38) /System/Library/PrivateFrameworks/SidecarCore.framework/Versions/A/SidecarCore
0x7fff698f7000 - 0x7fff69907ffb com.apple.sidecar-ui (1.0 - 38) /System/Library/PrivateFrameworks/SidecarUI.framework/Versions/A/SidecarUI
0x7fff6a675000 - 0x7fff6a925ff7 com.apple.SkyLight (1.600.0 - 336.80.6) /System/Library/PrivateFrameworks/SkyLight.framework/Versions/A/SkyLight
0x7fff6b0f4000 - 0x7fff6b101fff com.apple.SpeechRecognitionCore (5.0.21 - 5.0.21) /System/Library/PrivateFrameworks/SpeechRecognitionCore.framework/Versions/A/SpeechRecognitionCore
0x7fff6b1be000 - 0x7fff6b426ffb com.apple.spotlight.index (10.7.0 - 1191.51) /System/Library/PrivateFrameworks/SpotlightIndex.framework/Versions/A/SpotlightIndex
0x7fff6b7e6000 - 0x7fff6b825ff3 com.apple.StreamingZip (1.0 - 1) /System/Library/PrivateFrameworks/StreamingZip.framework/Versions/A/StreamingZip
0x7fff6b826000 - 0x7fff6b897ffb com.apple.Suggestions (6.0 - 226) /System/Library/PrivateFrameworks/Suggestions.framework/Versions/A/Suggestions
0x7fff6bf62000 - 0x7fff6bfefff7 com.apple.Symbolication (10.0 - 64254.5) /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication
0x7fff6bff0000 - 0x7fff6bff9ffb com.apple.SymptomDiagnosticReporter (1.0 - 820.207.88) /System/Library/PrivateFrameworks/SymptomDiagnosticReporter.framework/Versions/A/SymptomDiagnosticReporter
0x7fff6c24b000 - 0x7fff6c277fff com.apple.framework.SystemAdministration (1.0 - 1.0) /System/Library/PrivateFrameworks/SystemAdministration.framework/Versions/A/SystemAdministration
0x7fff6c4f8000 - 0x7fff6c505ff3 com.apple.TCC (1.0 - 1) /System/Library/PrivateFrameworks/TCC.framework/Versions/A/TCC
0x7fff6c774000 - 0x7fff6c83bff7 com.apple.TextureIO (3.8.4 - 3.8.1) /System/Library/PrivateFrameworks/TextureIO.framework/Versions/A/TextureIO
0x7fff6c899000 - 0x7fff6c8b4fff com.apple.ToneKit (1.0 - 1) /System/Library/PrivateFrameworks/ToneKit.framework/Versions/A/ToneKit
0x7fff6c8b5000 - 0x7fff6c8ddffb com.apple.ToneLibrary (1.0 - 1) /System/Library/PrivateFrameworks/ToneLibrary.framework/Versions/A/ToneLibrary
0x7fff6c8f5000 - 0x7fff6c8f6fff com.apple.TrustEvaluationAgent (2.0 - 31.200.1) /System/Library/PrivateFrameworks/TrustEvaluationAgent.framework/Versions/A/TrustEvaluationAgent
0x7fff6c8fc000 - 0x7fff6cab6fff com.apple.UIFoundation (1.0 - 550.35) /System/Library/PrivateFrameworks/UIFoundation.framework/Versions/A/UIFoundation
0x7fff6d7a4000 - 0x7fff6d88dfff com.apple.ViewBridge (400.1 - 400.1) /System/Library/PrivateFrameworks/ViewBridge.framework/Versions/A/ViewBridge
0x7fff6e0a8000 - 0x7fff6e0abfff com.apple.dt.XCTTargetBootstrap (1.0 - 1) /System/Library/PrivateFrameworks/XCTTargetBootstrap.framework/Versions/A/XCTTargetBootstrap
0x7fff6e4dc000 - 0x7fff6e4deff3 com.apple.loginsupport (1.0 - 1) /System/Library/PrivateFrameworks/login.framework/Versions/A/Frameworks/loginsupport.framework/Versions/A/loginsupport
0x7fff6e4df000 - 0x7fff6e4f4fff com.apple.login (3.0 - 3.0) /System/Library/PrivateFrameworks/login.framework/Versions/A/login
0x7fff6e52b000 - 0x7fff6e55dffb com.apple.contacts.vCard (1.0 - ???) /System/Library/PrivateFrameworks/vCard.framework/Versions/A/vCard
0x7fff6e798000 - 0x7fff6e7d0fff libCRFSuite.dylib (41.15.4) /usr/lib/libCRFSuite.dylib
0x7fff6e7d3000 - 0x7fff6e7deff7 libChineseTokenizer.dylib (28.15.3) /usr/lib/libChineseTokenizer.dylib
0x7fff6e7df000 - 0x7fff6e86bff7 libCoreStorage.dylib (546.50.1) /usr/lib/libCoreStorage.dylib
0x7fff6e86f000 - 0x7fff6e870ff7 libDiagnosticMessagesClient.dylib (107) /usr/lib/libDiagnosticMessagesClient.dylib
0x7fff6e8a7000 - 0x7fff6ea6aff7 libFosl_dynamic.dylib (18.3.2) /usr/lib/libFosl_dynamic.dylib
0x7fff6ea8b000 - 0x7fff6ea92fff libMatch.1.dylib (31.200.1) /usr/lib/libMatch.1.dylib
0x7fff6eac0000 - 0x7fff6eadfffb libMobileGestalt.dylib (645.200.76) /usr/lib/libMobileGestalt.dylib
0x7fff6eae0000 - 0x7fff6eae0fff libOpenScriptingUtil.dylib (178) /usr/lib/libOpenScriptingUtil.dylib
0x7fff6ec21000 - 0x7fff6ec22ffb libSystem.B.dylib (1252.200.5) /usr/lib/libSystem.B.dylib
0x7fff6ecac000 - 0x7fff6ecadfff libThaiTokenizer.dylib (2.15.1) /usr/lib/libThaiTokenizer.dylib
0x7fff6ecc0000 - 0x7fff6ecd6ffb libapple_nghttp2.dylib (1.24.1) /usr/lib/libapple_nghttp2.dylib
0x7fff6ecd7000 - 0x7fff6ed00ffb libarchive.2.dylib (54.200.3) /usr/lib/libarchive.2.dylib
0x7fff6ed01000 - 0x7fff6ed80fef libate.dylib (1.13.8) /usr/lib/libate.dylib
0x7fff6ed84000 - 0x7fff6ed84ff3 libauto.dylib (187) /usr/lib/libauto.dylib
0x7fff6ee5c000 - 0x7fff6ee6cff3 libbsm.0.dylib (39.200.18) /usr/lib/libbsm.0.dylib
0x7fff6ee6d000 - 0x7fff6ee7bfff libbz2.1.0.dylib (38.200.3) /usr/lib/libbz2.1.0.dylib
0x7fff6ee7c000 - 0x7fff6eed3ff7 libc++.1.dylib (400.9.4) /usr/lib/libc++.1.dylib
0x7fff6eed4000 - 0x7fff6eee9fff libc++abi.dylib (400.17) /usr/lib/libc++abi.dylib
0x7fff6eeea000 - 0x7fff6eeeaff3 libcharset.1.dylib (51.200.6) /usr/lib/libcharset.1.dylib
0x7fff6eeeb000 - 0x7fff6eefbffb libcmph.dylib (6.15.1) /usr/lib/libcmph.dylib
0x7fff6eefc000 - 0x7fff6ef14ffb libcompression.dylib (52.200.13) /usr/lib/libcompression.dylib
0x7fff6f1bf000 - 0x7fff6f1d5fff libcoretls.dylib (155.200.6) /usr/lib/libcoretls.dylib
0x7fff6f1d6000 - 0x7fff6f1d7ff3 libcoretls_cfhelpers.dylib (155.200.6) /usr/lib/libcoretls_cfhelpers.dylib
0x7fff6f376000 - 0x7fff6f506ff3 libcrypto.35.dylib (22.200.4) /usr/lib/libcrypto.35.dylib
0x7fff6f6a1000 - 0x7fff6f839ff7 libcrypto.42.dylib (22.200.4) /usr/lib/libcrypto.42.dylib
0x7fff6f83a000 - 0x7fff6f845ff7 libcsfde.dylib (546.50.1) /usr/lib/libcsfde.dylib
0x7fff6f84e000 - 0x7fff6f8a4ffb libcups.2.dylib (462.9) /usr/lib/libcups.2.dylib
0x7fff6f8ce000 - 0x7fff6f922ff3 libcurl.4.dylib (105.200.2) /usr/lib/libcurl.4.dylib
0x7fff6f9dc000 - 0x7fff6f9dcfff libenergytrace.dylib (17.200.1) /usr/lib/libenergytrace.dylib
0x7fff6f9dd000 - 0x7fff6f9f6ffb libexpat.1.dylib (16.1.1) /usr/lib/libexpat.1.dylib
0x7fff6fa0e000 - 0x7fff6fa13ff7 libgermantok.dylib (17.15.2) /usr/lib/libgermantok.dylib
0x7fff6fa14000 - 0x7fff6fa19ff7 libheimdal-asn1.dylib (520.200.17) /usr/lib/libheimdal-asn1.dylib
0x7fff6fa45000 - 0x7fff6fb36ff7 libiconv.2.dylib (51.200.6) /usr/lib/libiconv.2.dylib
0x7fff6fb37000 - 0x7fff6fd9affb libicucore.A.dylib (62107.0.1) /usr/lib/libicucore.A.dylib
0x7fff6fde7000 - 0x7fff6fde8fff liblangid.dylib (128.15.1) /usr/lib/liblangid.dylib
0x7fff6fde9000 - 0x7fff6fe01fff liblzma.5.dylib (10.200.3) /usr/lib/liblzma.5.dylib
0x7fff6fe19000 - 0x7fff6fec9fff libmecab.1.0.0.dylib (779.15.23) /usr/lib/libmecab.1.0.0.dylib
0x7fff6feca000 - 0x7fff70107fff libmecabra.dylib (779.15.23) /usr/lib/libmecabra.dylib
0x7fff702df000 - 0x7fff70637fff libnetwork.dylib (1229.200.109) /usr/lib/libnetwork.dylib
0x7fff706c8000 - 0x7fff70e4efe7 libobjc.A.dylib (750) /usr/lib/libobjc.A.dylib
0x7fff70e4f000 - 0x7fff70e50fff libodfde.dylib (24.50.1) /usr/lib/libodfde.dylib
0x7fff70e61000 - 0x7fff70e65ffb libpam.2.dylib (22.200.1) /usr/lib/libpam.2.dylib
0x7fff70e68000 - 0x7fff70e9eff7 libpcap.A.dylib (79.200.4) /usr/lib/libpcap.A.dylib
0x7fff70fb8000 - 0x7fff70fd0ffb libresolv.9.dylib (65.200.2) /usr/lib/libresolv.9.dylib
0x7fff70fd2000 - 0x7fff7100eff7 libsandbox.1.dylib (851.201.1) /usr/lib/libsandbox.1.dylib
0x7fff7100f000 - 0x7fff71021ff7 libsasl2.2.dylib (211) /usr/lib/libsasl2.2.dylib
0x7fff71022000 - 0x7fff71023ffb libspindump.dylib (266) /usr/lib/libspindump.dylib
0x7fff71024000 - 0x7fff711fbfe7 libsqlite3.dylib (274.20) /usr/lib/libsqlite3.dylib
0x7fff712fe000 - 0x7fff7134bfff libssl.44.dylib (22.200.4) /usr/lib/libssl.44.dylib
0x7fff7134c000 - 0x7fff7139dff7 libstdc++.6.dylib (104.1) /usr/lib/libstdc++.6.dylib
0x7fff71488000 - 0x7fff7148bffb libutil.dylib (51.200.4) /usr/lib/libutil.dylib
0x7fff7148c000 - 0x7fff71499fff libxar.1.dylib (404) /usr/lib/libxar.1.dylib
0x7fff7149e000 - 0x7fff71581fff libxml2.2.dylib (32.6) /usr/lib/libxml2.2.dylib
0x7fff71582000 - 0x7fff715aaff3 libxslt.1.dylib (16.1) /usr/lib/libxslt.1.dylib
0x7fff715ab000 - 0x7fff715bdffb libz.1.dylib (70.200.4) /usr/lib/libz.1.dylib
0x7fff7162e000 - 0x7fff71632ff3 libcache.dylib (81) /usr/lib/system/libcache.dylib
0x7fff71633000 - 0x7fff7163dff3 libcommonCrypto.dylib (60118.200.6) /usr/lib/system/libcommonCrypto.dylib
0x7fff7163e000 - 0x7fff71645fff libcompiler_rt.dylib (63.4) /usr/lib/system/libcompiler_rt.dylib
0x7fff71646000 - 0x7fff7164fff3 libcopyfile.dylib (146.200.3) /usr/lib/system/libcopyfile.dylib
0x7fff71650000 - 0x7fff716d4fff libcorecrypto.dylib (602.200.50) /usr/lib/system/libcorecrypto.dylib
0x7fff7175a000 - 0x7fff71794ff7 libdispatch.dylib (1008.200.78) /usr/lib/system/libdispatch.dylib
0x7fff71795000 - 0x7fff717c4fff libdyld.dylib (625.13) /usr/lib/system/libdyld.dylib
0x7fff717c5000 - 0x7fff717c5ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff717c6000 - 0x7fff717d2ff7 libkxld.dylib (4903.201.2) /usr/lib/system/libkxld.dylib
0x7fff717d3000 - 0x7fff717d3ff7 liblaunch.dylib (1336.201.2) /usr/lib/system/liblaunch.dylib
0x7fff717d4000 - 0x7fff717d9fff libmacho.dylib (917) /usr/lib/system/libmacho.dylib
0x7fff717da000 - 0x7fff717dcff3 libquarantine.dylib (86.200.11) /usr/lib/system/libquarantine.dylib
0x7fff717dd000 - 0x7fff717deff3 libremovefile.dylib (45.200.2) /usr/lib/system/libremovefile.dylib
0x7fff717df000 - 0x7fff717f6ff3 libsystem_asl.dylib (356.200.4) /usr/lib/system/libsystem_asl.dylib
0x7fff717f7000 - 0x7fff717f7fff libsystem_blocks.dylib (73) /usr/lib/system/libsystem_blocks.dylib
0x7fff717f8000 - 0x7fff71880fff libsystem_c.dylib (1272.200.26) /usr/lib/system/libsystem_c.dylib
0x7fff71881000 - 0x7fff71884ff7 libsystem_configuration.dylib (963.200.27) /usr/lib/system/libsystem_configuration.dylib
0x7fff71885000 - 0x7fff71888ff7 libsystem_coreservices.dylib (66) /usr/lib/system/libsystem_coreservices.dylib
0x7fff71889000 - 0x7fff7188fffb libsystem_darwin.dylib (1272.200.26) /usr/lib/system/libsystem_darwin.dylib
0x7fff71890000 - 0x7fff71896ff7 libsystem_dnssd.dylib (878.200.35) /usr/lib/system/libsystem_dnssd.dylib
0x7fff71897000 - 0x7fff718e3ff3 libsystem_info.dylib (517.200.9) /usr/lib/system/libsystem_info.dylib
0x7fff718e4000 - 0x7fff7190bff7 libsystem_kernel.dylib (4903.201.2) /usr/lib/system/libsystem_kernel.dylib
0x7fff7190c000 - 0x7fff71957ff7 libsystem_m.dylib (3158.200.7) /usr/lib/system/libsystem_m.dylib
0x7fff71958000 - 0x7fff7197cff7 libsystem_malloc.dylib (166.200.60) /usr/lib/system/libsystem_malloc.dylib
0x7fff7197d000 - 0x7fff71988ffb libsystem_networkextension.dylib (767.200.40) /usr/lib/system/libsystem_networkextension.dylib
0x7fff71989000 - 0x7fff71990fff libsystem_notify.dylib (172.200.21) /usr/lib/system/libsystem_notify.dylib
0x7fff71991000 - 0x7fff7199afef libsystem_platform.dylib (177.200.16) /usr/lib/system/libsystem_platform.dylib
0x7fff7199b000 - 0x7fff719a5fff libsystem_pthread.dylib (330.201.1) /usr/lib/system/libsystem_pthread.dylib
0x7fff719a6000 - 0x7fff719a9ff7 libsystem_sandbox.dylib (851.201.1) /usr/lib/system/libsystem_sandbox.dylib
0x7fff719aa000 - 0x7fff719acff7 libsystem_secinit.dylib (30.200.13) /usr/lib/system/libsystem_secinit.dylib
0x7fff719ad000 - 0x7fff719b4ff7 libsystem_symptoms.dylib (820.207.88) /usr/lib/system/libsystem_symptoms.dylib
0x7fff719b5000 - 0x7fff719caff7 libsystem_trace.dylib (906.200.86) /usr/lib/system/libsystem_trace.dylib
0x7fff719cc000 - 0x7fff719d1ffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff719d2000 - 0x7fff71a02fff libxpc.dylib (1336.201.2) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 6
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 234416
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=749.2M resident=0K(0%) swapped_out_or_unallocated=749.2M(100%)
Writable regions: Total=2.0G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.0G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 384K 4
Activity Tracing 256K 2
CG backing stores 35.3M 12
CG image 172K 22
CoreAnimation 340K 31
CoreGraphics 8K 2
CoreImage 200K 27
CoreUI image data 4172K 43
CoreUI image file 360K 7
Foundation 4K 2
Kernel Alloc Once 8K 2
MALLOC 690.1M 491
MALLOC guard page 32K 9
MALLOC_LARGE (reserved) 384K 2 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 2 reserved VM address space (unallocated)
Memory Tag 242 12K 2
Memory Tag 251 32K 2
OpenCL 486.9M 63
OpenCL (reserved) 92K 6 reserved VM address space (unallocated)
OpenGL GLSL 512K 7
STACK GUARD 168K 43
Stack 149.3M 44
Stack Guard 56.0M 2
VM_ALLOCATE 276.6M 419
__DATA 59.5M 540
__FONT_DATA 4K 2
__GLSLBUILTINS 5176K 2
__LINKEDIT 240.5M 156
__TEXT 508.7M 509
__UNICODE 560K 2
mapped file 160.6M 65
shared memory 1124K 17
=========== ======= =======
TOTAL 3.0G 2507
TOTAL, minus reserved VM space 2.6G 2507
Log:
UCSF ChimeraX version: 0.8 (2018-11-11)
How to cite UCSF ChimeraX
> open /Users/gmontoya/Documents/Cmr-
beta/Csx1_Final_Refined_Structures_051218/Csx1-Apo/I212121/Csx1-HisTag-I212121-TRIMER-
coot-0.pdb
Summary of feedback from opening /Users/gmontoya/Documents/Cmr-
beta/Csx1_Final_Refined_Structures_051218/Csx1-Apo/I212121/Csx1-HisTag-I212121-TRIMER-
coot-0.pdb
---
warnings | Ignored bad PDB record found on line 1
REMARK Date 2018-11-14 Time 23:22:11 CET +0100 (1542234131.77 s)
Ignored bad PDB record found on line 2
REMARK PHENIX refinement
Ignored bad PDB record found on line 4
REMARK ****************** INPUT FILES AND LABELS
******************************
Ignored bad PDB record found on line 5
REMARK Reflections:
Ignored bad PDB record found on line 6
REMARK file name : /Users/rafaelmolina 1/Desktop/CPR/CPR_Projects/CRISPR-
31 messages similar to the above omitted
Chain information for Csx1-HisTag-I212121-TRIMER-coot-0.pdb #1
---
Chain | Description
A B C E F G | No description available
OpenGL version: 4.1 ATI-2.2.8
OpenGL renderer: AMD Radeon R9 M370X OpenGL Engine
OpenGL vendor: ATI Technologies Inc.
![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
This is a known bug, fixed in my development builds. I'll be releasing a new version within the next fortnight.