Opened 19 months ago

Closed 19 months ago

#14949 closed defect (can't reproduce)

Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0

Reported by: chimerax-bug-report@… Owned by: pett
Priority: normal Milestone:
Component: Window Toolkit Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        macOS-13.1-arm64-arm-64bit
ChimeraX Version: 1.6.dev202303310056 (2023-03-31 00:56:20 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault

Current thread 0x0000000203b0ba80 (most recent call first):
  File "/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 275 in event_loop
  File "/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 892 in init
  File "/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in 
  File "/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
  File "/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main


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{
  "uptime" : 65000,
  "procRole" : "Foreground",
  "version" : 2,
  "userID" : 501,
  "deployVersion" : 210,
  "modelCode" : "MacBookPro18,3",
  "coalitionID" : 3458,
  "osVersion" : {
    "train" : "macOS 13.1",
    "build" : "22C65",
    "releaseType" : "User"
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  "captureTime" : "2024-04-10 11:06:10.9376 -0700",
  "incident" : "19F1EF95-657F-463E-B226-DBF6CF0BFD7F",
  "pid" : 35917,
  "translated" : false,
  "cpuType" : "ARM-64",
  "roots_installed" : 0,
  "bug_type" : "309",
  "procLaunch" : "2024-04-09 12:09:13.5946 -0700",
  "procStartAbsTime" : 1307793428837,
  "procExitAbsTime" : 1581809181152,
  "procName" : "ChimeraX",
  "procPath" : "\/Applications\/ChimeraX.app\/Contents\/MacOS\/ChimeraX",
  "bundleInfo" : {"CFBundleShortVersionString":"1.6.0","CFBundleVersion":"1.6.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
  "storeInfo" : {"deviceIdentifierForVendor":"8076F165-8627-5EEF-B587-5CCCDB1513AA","thirdParty":true},
  "parentProc" : "launchd",
  "parentPid" : 1,
  "coalitionName" : "edu.ucsf.cgl.ChimeraX",
  "crashReporterKey" : "1A4B64E1-8B45-F009-B767-55D204EECFAE",
  "throttleTimeout" : 2147483647,
  "sleepWakeUUID" : "1BDD706F-9A3A-4363-836A-B4A699A63617",
  "sip" : "enabled",
  "vmRegionInfo" : "0x18 is not in any region.  Bytes before following region: 105554055790568\n      REGION TYPE                    START - END         [ VSIZE] PRT\/MAX SHRMOD  REGION DETAIL\n      UNUSED SPACE AT START\n--->  \n      MALLOC_NANO (reserved)   600038000000-600040000000 [128.0M] rw-\/rwx SM=NUL  ...(unallocated)",
  "exception" : {"codes":"0x0000000000000001, 0x0000000000000018","rawCodes":[1,24],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000000000000018"},
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===== Log before crash start =====
UCSF ChimeraX version: 1.6.dev202303310056 (2023-03-31)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /Users/jeff/Documents/te_stuff/240408_alphafold_models.cxs format
> session

opened ChimeraX session  

> rename #4 complex_0.pdb

> rename #3 complex_1.pdb

> rename #5 complex_2.pdb

> rename #6 complex_4.pdb

> rename #7 complex_3.pdb

> rename #1 te_1.pdb

> ui tool show "Show Sequence Viewer"

> sequence chain #3/D #4/D #5/D #6/D #7/D

Alignment identifier is 1  

> select #3/D:5-20,24-26,40-54,60-65,69-84 #4/D:5-20,24-26,40-54,60-65,69-84
> #5/D:5-20,24-26,40-54,60-65,69-84 #6/D:5-20,24-26,40-54,60-65,69-84
> #7/D:5-20,24-26,40-54,60-65,69-84

2120 atoms, 2100 bonds, 280 residues, 5 models selected  

> select #3/D:5-20,24-26,40-54,60-65,69-84 #4/D:5-20,24-26,40-54,60-65,69-84
> #5/D:5-20,24-26,40-54,60-65,69-84 #6/D:5-20,24-26,40-54,60-65,69-84
> #7/D:5-20,24-26,40-54,60-65,69-84

2120 atoms, 2100 bonds, 280 residues, 5 models selected  
1 [ID: 1] region structure helices RMSD: 66.271  
  

> select clear

> select #3/D:5-20,24-26,40-54,60-65,69-84 #4/D:5-20,24-26,40-54,60-65,69-84
> #5/D:5-20,24-26,40-54,60-65,69-84 #6/D:5-20,24-26,40-54,60-65,69-84
> #7/D:5-20,24-26,40-54,60-65,69-84

2120 atoms, 2100 bonds, 280 residues, 5 models selected  

> select clear

> select #3/D:5-20,24-26,40-54,60-65,69-84 #4/D:5-20,24-26,40-54,60-65,69-84
> #5/D:5-20,24-26,40-54,60-65,69-84 #6/D:5-20,24-26,40-54,60-65,69-84
> #7/D:5-20,24-26,40-54,60-65,69-84

2120 atoms, 2100 bonds, 280 residues, 5 models selected  

> select clear

> select #7/D:40

6 atoms, 5 bonds, 1 residue, 1 model selected  

> select :40

78 atoms, 61 bonds, 17 residues, 6 models selected  

> show sel & #3-7 atoms

> hide sel & #3-7 atoms

> ui tool show "Show Sequence Viewer"

> sequence chain #1/B #1/C #3/B #3/C #4/B #4/C #5/B #5/C #6/B #6/C #7/B #7/C

Alignment identifier is 2  

> select
> #1/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
> #3/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
> #4/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
> #5/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
> #6/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
> #7/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294

9552 atoms, 9660 bonds, 1140 residues, 6 models selected  

> select
> #1/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
> #3/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
> #4/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
> #5/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
> #6/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
> #7/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312

6552 atoms, 6576 bonds, 828 residues, 6 models selected  

> select clear

> save /Users/jeff/Documents/te_stuff/240408_alphafold_models2.cxs

> help help:user

> select #3-7/B-C:184

80 atoms, 70 bonds, 10 residues, 5 models selected  

> label sel text "/{0.chain_id} {0.name} {0.number}{0.insertion_code}"

> select #3-7/B-C:224

60 atoms, 50 bonds, 10 residues, 5 models selected  

> label sel text "/{0.chain_id} {0.name} {0.number}{0.insertion_code}"

> show sel atoms

> select #3-7/B-C:184

80 atoms, 70 bonds, 10 residues, 5 models selected  

> show sel atoms

> select clear

> select #3-7/B-C:182,186,188

260 atoms, 240 bonds, 30 residues, 5 models selected  

> label sel text "/{0.chain_id} {0.name} {0.number}{0.insertion_code}"

> show sel atoms

> select clear

> select #3-7/B-C:182

80 atoms, 70 bonds, 10 residues, 5 models selected  

> show sel atoms

> hide sel atoms

> ~label sel residues

> select clear

> select #3-7/D:40

30 atoms, 25 bonds, 5 residues, 5 models selected  

> show sel atoms

> label sel text "/{0.chain_id} {0.name} {0.number}{0.insertion_code}"

> save /Users/jeff/Documents/te_stuff/240408_alphafold_models3.cxs

> select clear

> hide #!3 models

> hide #!5 models

> hide #!6 models

> hide #!7 models

Drag select of 4 residues  

> select clear

> ui tool show Contacts

> contacts interModel false color #00ff1a reveal true

26151 contacts  

> close #8

> hide #!4 atoms

> ui tool show Contacts

> contacts interModel false intraMol false color #00ff1a reveal true

1975 contacts  
Drag select of 4 atoms, 30 residues, 2 bonds  

> show #!5 models

> hide #!4 models

> show #!4 models

> hide #!5 models

Drag select of 21 residues, 2 bonds  

> select clear

Drag select of 3 residues  

> select clear

Drag select of 9 residues  

> select clear

> open
> /Users/jeff/Documents/te_stuff/240408_alphafold_te_dimer/result-2/ranked_0.pdb

Chain information for ranked_0.pdb #9  
---  
Chain | Description  
B C | No description available  
  

> view #9 clip false

> log metadata #9

The model has no metadata

> log chains #9

Chain information for ranked_0.pdb #9  
---  
Chain | Description  
B C | No description available  
  

> rename #9 id #2

> undo

> close #2.2

> close #2.1

> open
> /Users/jeff/Documents/te_stuff/240408_alphafold_te_dimer/result-2/ranked_0.pdb

Chain information for ranked_0.pdb #9  
---  
Chain | Description  
B C | No description available  
  

> hide #9 models

> rename #9 te_0.pdb

> open
> /Users/jeff/Documents/te_stuff/240408_alphafold_complex/te_acp/ranking_debug.json

Failed opening file
/Users/jeff/Documents/te_stuff/240408_alphafold_complex/te_acp/ranking_debug.json:  
ranking_debug.json does not look like Mole Online json file, does not contain
Channels.  

> hide #!4 models

> hide #8 models

> show #!5 models

> hide #!5 atoms

Drag select of 9 residues  

> select clear

> ui tool show Contacts

> contacts interModel false intraMol false color #00ff1a reveal true

2133 contacts  

> show #8 models

> select #5:251

16 atoms, 14 bonds, 2 residues, 1 model selected  

> select #5:295

14 atoms, 12 bonds, 2 residues, 1 model selected  

> ui tool show "Volume Viewer"

> toolshed show

> open
> /Users/jeff/Downloads/output_dir/te_acp/relaxed_model_4_multimer_v3_pred_0.pdb

Chain information for relaxed_model_4_multimer_v3_pred_0.pdb #10  
---  
Chain | Description  
A B | No description available  
C | No description available  
  

> ui tool show Matchmaker

> matchmaker #10 to #5

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker complex_2.pdb, chain B (#5) with
relaxed_model_4_multimer_v3_pred_0.pdb, chain B (#10), sequence alignment
score = 1605.8  
RMSD between 312 pruned atom pairs is 0.513 angstroms; (across all 313 pairs:
0.544)  
  

> hide #!5 models

> hide #8 models

> ui tool show Contacts

> contacts interModel false intraMol false color #00ff1a reveal true

2620 contacts  

> hide #10 models

> show #10 models

> select add #5

5516 atoms, 5630 bonds, 243 pseudobonds, 711 residues, 3 models selected  

> select subtract #5

Nothing selected  

> show #8 models

> hide #10 atoms

> show #10 atoms

> hide #8 models

> hide #10 atoms

> interfaces #10 & ~solvent

2 buried areas: A B 2016, A C 797  

> hide #10 models

> show #10 models

> show #10 cartoons

> hide #10 surfaces

> style #10 stick

Changed 10967 atom styles  

> hide #10 atoms

> show #8 models

> hide #8 models

> ui tool show Contacts

> contacts interModel false intraMol false color #00ff1a reveal true

2620 contacts  

> select H

5448 atoms, 40 pseudobonds, 711 residues, 2 models selected  

> hide sel atoms

> show #8 models

> select clear

> select #10/D

Nothing selected  

> select #10/C

1277 atoms, 1279 bonds, 85 residues, 1 model selected  

> color sel hot pink

> select clear

> select #10/C

1277 atoms, 1279 bonds, 85 residues, 1 model selected  

> color sel byhetero

> select clear

> save /Users/jeff/Documents/te_stuff/240408_alphafold_models4.cxs

Unsupported scale factor (0.000000) detected on Display0  

Unsupported scale factor (0.000000) detected on Display1  

Unsupported scale factor (0.000000) detected on Display0  

Unsupported scale factor (0.000000) detected on Display1  

QPainter::begin: Paint device returned engine == 0, type: 3  


===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.6.dev202303310056 (2023-03-31)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 4.1 Metal - 83
OpenGL renderer: Apple M1 Pro
OpenGL vendor: Apple

Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: MacBook Pro
      Model Identifier: MacBookPro18,3
      Model Number: MKGQ3LL/A
      Chip: Apple M1 Pro
      Total Number of Cores: 10 (8 performance and 2 efficiency)
      Memory: 16 GB
      System Firmware Version: 8419.60.44
      OS Loader Version: 8419.60.44

Software:

    System Software Overview:

      System Version: macOS 13.1 (22C65)
      Kernel Version: Darwin 22.2.0
      Time since boot: 5 days, 19 hours, 43 minutes

Graphics/Displays:

    Apple M1 Pro:

      Chipset Model: Apple M1 Pro
      Type: GPU
      Bus: Built-In
      Total Number of Cores: 16
      Vendor: Apple (0x106b)
      Metal Support: Metal 3
      Displays:
        DELL S2340M:
          Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
          UI Looks like: 1920 x 1080 @ 60.00Hz
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Rotation: Supported
        Color LCD:
          Display Type: Built-in Liquid Retina XDR Display
          Resolution: 3024 x 1964 Retina
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal


Installed Packages:
    alabaster: 0.7.13
    appdirs: 1.4.4
    appnope: 0.1.3
    asttokens: 2.2.1
    Babel: 2.12.1
    backcall: 0.2.0
    beautifulsoup4: 4.11.2
    blockdiag: 3.0.0
    build: 0.10.0
    certifi: 2021.10.8
    cftime: 1.6.2
    charset-normalizer: 3.1.0
    ChimeraX-AddCharge: 1.5.9
    ChimeraX-AddH: 2.2.4
    ChimeraX-AlignmentAlgorithms: 2.0.1
    ChimeraX-AlignmentHdrs: 3.3.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.9.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.3
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.44
    ChimeraX-AtomicLibrary: 10.0.6
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3.2
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.2
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.9
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.2
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.2
    ChimeraX-ChangeChains: 1.0.2
    ChimeraX-CheckWaters: 1.3.1
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.3
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.6.dev202303310056
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.4.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2
    ChimeraX-DistMonitor: 1.4
    ChimeraX-DockPrep: 1.1.1
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.1
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-Label: 1.1.7
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.5
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.2
    ChimeraX-Map: 1.1.4
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.0.12
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.12
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.9
    ChimeraX-ModelPanel: 1.3.7
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.0
    ChimeraX-NRRD: 1.0
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.10.1
    ChimeraX-PDB: 2.7
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 3.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.1
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.8.3
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.1
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.10.2
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.2
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.1
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.28.4
    ChimeraX-uniprot: 2.2.2
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.1
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.1.3
    contourpy: 1.0.7
    cxservices: 1.2.2
    cycler: 0.11.0
    Cython: 0.29.33
    debugpy: 1.6.6
    decorator: 5.1.1
    docutils: 0.19
    executing: 1.2.0
    filelock: 3.9.0
    fonttools: 4.39.3
    funcparserlib: 1.0.1
    grako: 3.16.5
    h5py: 3.8.0
    html2text: 2020.1.16
    idna: 3.4
    ihm: 0.35
    imagecodecs: 2022.2.22
    imagesize: 1.4.1
    importlib-metadata: 6.1.0
    ipykernel: 6.21.1
    ipython: 8.10.0
    ipython-genutils: 0.2.0
    ipywidgets: 8.0.6
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 8.0.2
    jupyter-core: 5.3.0
    jupyterlab-widgets: 3.0.7
    kiwisolver: 1.4.4
    line-profiler: 4.0.2
    lxml: 4.9.2
    lz4: 4.3.2
    MarkupSafe: 2.1.2
    matplotlib: 3.6.3
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.5.6
    netCDF4: 1.6.2
    networkx: 2.8.8
    nibabel: 5.0.1
    nptyping: 2.5.0
    numexpr: 2.8.4
    numpy: 1.23.5
    openvr: 1.23.701
    packaging: 21.3
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 9.3.0
    pip: 23.0
    pkginfo: 1.9.6
    platformdirs: 3.2.0
    prompt-toolkit: 3.0.38
    psutil: 5.9.4
    ptyprocess: 0.7.0
    pure-eval: 0.2.2
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.14.0
    pynrrd: 1.0.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.9
    pyproject-hooks: 1.0.0
    PyQt6-commercial: 6.4.2
    PyQt6-Qt6: 6.4.3
    PyQt6-sip: 13.4.1
    PyQt6-WebEngine-commercial: 6.4.0
    PyQt6-WebEngine-Qt6: 6.4.3
    python-dateutil: 2.8.2
    pytz: 2023.3
    pyzmq: 25.0.2
    qtconsole: 5.4.0
    QtPy: 2.3.1
    RandomWords: 0.4.0
    requests: 2.28.2
    scipy: 1.9.3
    setuptools: 67.4.0
    setuptools-scm: 7.0.5
    sfftk-rw: 0.7.3
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.4
    sphinx: 6.1.3
    sphinx-autodoc-typehints: 1.22
    sphinxcontrib-applehelp: 1.0.4
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.1
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    stack-data: 0.6.2
    tables: 3.7.0
    tcia-utils: 1.2.0
    tifffile: 2022.10.10
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.2
    traitlets: 5.9.0
    typing-extensions: 4.5.0
    urllib3: 1.26.15
    wcwidth: 0.2.6
    webcolors: 1.12
    wheel: 0.38.4
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.7
    zipp: 3.15.0

Change History (2)

comment:1 by pett, 19 months ago

Component: Unassigned → Window Toolkit
Owner: set to pett
Platform: → all
Project: → ChimeraX
Status: new → accepted
Summary: ChimeraX bug report submission → Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0

comment:2 by pett, 19 months ago

Resolution: → can't reproduce
Status: accepted → closed
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