![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 19 months ago
Closed 19 months ago
#14949 closed defect (can't reproduce)
Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-13.1-arm64-arm-64bit
ChimeraX Version: 1.6.dev202303310056 (2023-03-31 00:56:20 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x0000000203b0ba80 (most recent call first):
File "/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 892 in init
File "/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in
File "/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
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{
"uptime" : 65000,
"procRole" : "Foreground",
"version" : 2,
"userID" : 501,
"deployVersion" : 210,
"modelCode" : "MacBookPro18,3",
"coalitionID" : 3458,
"osVersion" : {
"train" : "macOS 13.1",
"build" : "22C65",
"releaseType" : "User"
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"captureTime" : "2024-04-10 11:06:10.9376 -0700",
"incident" : "19F1EF95-657F-463E-B226-DBF6CF0BFD7F",
"pid" : 35917,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2024-04-09 12:09:13.5946 -0700",
"procStartAbsTime" : 1307793428837,
"procExitAbsTime" : 1581809181152,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.6.0","CFBundleVersion":"1.6.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
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"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "1A4B64E1-8B45-F009-B767-55D204EECFAE",
"throttleTimeout" : 2147483647,
"sleepWakeUUID" : "1BDD706F-9A3A-4363-836A-B4A699A63617",
"sip" : "enabled",
"vmRegionInfo" : "0x18 is not in any region. Bytes before following region: 105554055790568\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n MALLOC_NANO (reserved) 600038000000-600040000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)",
"exception" : {"codes":"0x0000000000000001, 0x0000000000000018","rawCodes":[1,24],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000000000000018"},
"vmregioninfo" : "0x18 is not in any region. Bytes before following region: 105554055790568\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n MALLOC_NANO (reserved) 600038000000-600040000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)",
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===== Log before crash start =====
UCSF ChimeraX version: 1.6.dev202303310056 (2023-03-31)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/jeff/Documents/te_stuff/240408_alphafold_models.cxs format
> session
opened ChimeraX session
> rename #4 complex_0.pdb
> rename #3 complex_1.pdb
> rename #5 complex_2.pdb
> rename #6 complex_4.pdb
> rename #7 complex_3.pdb
> rename #1 te_1.pdb
> ui tool show "Show Sequence Viewer"
> sequence chain #3/D #4/D #5/D #6/D #7/D
Alignment identifier is 1
> select #3/D:5-20,24-26,40-54,60-65,69-84 #4/D:5-20,24-26,40-54,60-65,69-84
> #5/D:5-20,24-26,40-54,60-65,69-84 #6/D:5-20,24-26,40-54,60-65,69-84
> #7/D:5-20,24-26,40-54,60-65,69-84
2120 atoms, 2100 bonds, 280 residues, 5 models selected
> select #3/D:5-20,24-26,40-54,60-65,69-84 #4/D:5-20,24-26,40-54,60-65,69-84
> #5/D:5-20,24-26,40-54,60-65,69-84 #6/D:5-20,24-26,40-54,60-65,69-84
> #7/D:5-20,24-26,40-54,60-65,69-84
2120 atoms, 2100 bonds, 280 residues, 5 models selected
1 [ID: 1] region structure helices RMSD: 66.271
> select clear
> select #3/D:5-20,24-26,40-54,60-65,69-84 #4/D:5-20,24-26,40-54,60-65,69-84
> #5/D:5-20,24-26,40-54,60-65,69-84 #6/D:5-20,24-26,40-54,60-65,69-84
> #7/D:5-20,24-26,40-54,60-65,69-84
2120 atoms, 2100 bonds, 280 residues, 5 models selected
> select clear
> select #3/D:5-20,24-26,40-54,60-65,69-84 #4/D:5-20,24-26,40-54,60-65,69-84
> #5/D:5-20,24-26,40-54,60-65,69-84 #6/D:5-20,24-26,40-54,60-65,69-84
> #7/D:5-20,24-26,40-54,60-65,69-84
2120 atoms, 2100 bonds, 280 residues, 5 models selected
> select clear
> select #7/D:40
6 atoms, 5 bonds, 1 residue, 1 model selected
> select :40
78 atoms, 61 bonds, 17 residues, 6 models selected
> show sel & #3-7 atoms
> hide sel & #3-7 atoms
> ui tool show "Show Sequence Viewer"
> sequence chain #1/B #1/C #3/B #3/C #4/B #4/C #5/B #5/C #6/B #6/C #7/B #7/C
Alignment identifier is 2
> select
> #1/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
> #3/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
> #4/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
> #5/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
> #6/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
> #7/B-C:9-14,63-74,83-93,97-106,112-124,211-220,229-236,268-278,281-294
9552 atoms, 9660 bonds, 1140 residues, 6 models selected
> select
> #1/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
> #3/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
> #4/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
> #5/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
> #6/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
> #7/B-C:17-19,28-47,58-60,135-144,155-157,180-182,191-201,204-208,241-244,306-312
6552 atoms, 6576 bonds, 828 residues, 6 models selected
> select clear
> save /Users/jeff/Documents/te_stuff/240408_alphafold_models2.cxs
> help help:user
> select #3-7/B-C:184
80 atoms, 70 bonds, 10 residues, 5 models selected
> label sel text "/{0.chain_id} {0.name} {0.number}{0.insertion_code}"
> select #3-7/B-C:224
60 atoms, 50 bonds, 10 residues, 5 models selected
> label sel text "/{0.chain_id} {0.name} {0.number}{0.insertion_code}"
> show sel atoms
> select #3-7/B-C:184
80 atoms, 70 bonds, 10 residues, 5 models selected
> show sel atoms
> select clear
> select #3-7/B-C:182,186,188
260 atoms, 240 bonds, 30 residues, 5 models selected
> label sel text "/{0.chain_id} {0.name} {0.number}{0.insertion_code}"
> show sel atoms
> select clear
> select #3-7/B-C:182
80 atoms, 70 bonds, 10 residues, 5 models selected
> show sel atoms
> hide sel atoms
> ~label sel residues
> select clear
> select #3-7/D:40
30 atoms, 25 bonds, 5 residues, 5 models selected
> show sel atoms
> label sel text "/{0.chain_id} {0.name} {0.number}{0.insertion_code}"
> save /Users/jeff/Documents/te_stuff/240408_alphafold_models3.cxs
> select clear
> hide #!3 models
> hide #!5 models
> hide #!6 models
> hide #!7 models
Drag select of 4 residues
> select clear
> ui tool show Contacts
> contacts interModel false color #00ff1a reveal true
26151 contacts
> close #8
> hide #!4 atoms
> ui tool show Contacts
> contacts interModel false intraMol false color #00ff1a reveal true
1975 contacts
Drag select of 4 atoms, 30 residues, 2 bonds
> show #!5 models
> hide #!4 models
> show #!4 models
> hide #!5 models
Drag select of 21 residues, 2 bonds
> select clear
Drag select of 3 residues
> select clear
Drag select of 9 residues
> select clear
> open
> /Users/jeff/Documents/te_stuff/240408_alphafold_te_dimer/result-2/ranked_0.pdb
Chain information for ranked_0.pdb #9
---
Chain | Description
B C | No description available
> view #9 clip false
> log metadata #9
The model has no metadata
> log chains #9
Chain information for ranked_0.pdb #9
---
Chain | Description
B C | No description available
> rename #9 id #2
> undo
> close #2.2
> close #2.1
> open
> /Users/jeff/Documents/te_stuff/240408_alphafold_te_dimer/result-2/ranked_0.pdb
Chain information for ranked_0.pdb #9
---
Chain | Description
B C | No description available
> hide #9 models
> rename #9 te_0.pdb
> open
> /Users/jeff/Documents/te_stuff/240408_alphafold_complex/te_acp/ranking_debug.json
Failed opening file
/Users/jeff/Documents/te_stuff/240408_alphafold_complex/te_acp/ranking_debug.json:
ranking_debug.json does not look like Mole Online json file, does not contain
Channels.
> hide #!4 models
> hide #8 models
> show #!5 models
> hide #!5 atoms
Drag select of 9 residues
> select clear
> ui tool show Contacts
> contacts interModel false intraMol false color #00ff1a reveal true
2133 contacts
> show #8 models
> select #5:251
16 atoms, 14 bonds, 2 residues, 1 model selected
> select #5:295
14 atoms, 12 bonds, 2 residues, 1 model selected
> ui tool show "Volume Viewer"
> toolshed show
> open
> /Users/jeff/Downloads/output_dir/te_acp/relaxed_model_4_multimer_v3_pred_0.pdb
Chain information for relaxed_model_4_multimer_v3_pred_0.pdb #10
---
Chain | Description
A B | No description available
C | No description available
> ui tool show Matchmaker
> matchmaker #10 to #5
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker complex_2.pdb, chain B (#5) with
relaxed_model_4_multimer_v3_pred_0.pdb, chain B (#10), sequence alignment
score = 1605.8
RMSD between 312 pruned atom pairs is 0.513 angstroms; (across all 313 pairs:
0.544)
> hide #!5 models
> hide #8 models
> ui tool show Contacts
> contacts interModel false intraMol false color #00ff1a reveal true
2620 contacts
> hide #10 models
> show #10 models
> select add #5
5516 atoms, 5630 bonds, 243 pseudobonds, 711 residues, 3 models selected
> select subtract #5
Nothing selected
> show #8 models
> hide #10 atoms
> show #10 atoms
> hide #8 models
> hide #10 atoms
> interfaces #10 & ~solvent
2 buried areas: A B 2016, A C 797
> hide #10 models
> show #10 models
> show #10 cartoons
> hide #10 surfaces
> style #10 stick
Changed 10967 atom styles
> hide #10 atoms
> show #8 models
> hide #8 models
> ui tool show Contacts
> contacts interModel false intraMol false color #00ff1a reveal true
2620 contacts
> select H
5448 atoms, 40 pseudobonds, 711 residues, 2 models selected
> hide sel atoms
> show #8 models
> select clear
> select #10/D
Nothing selected
> select #10/C
1277 atoms, 1279 bonds, 85 residues, 1 model selected
> color sel hot pink
> select clear
> select #10/C
1277 atoms, 1279 bonds, 85 residues, 1 model selected
> color sel byhetero
> select clear
> save /Users/jeff/Documents/te_stuff/240408_alphafold_models4.cxs
Unsupported scale factor (0.000000) detected on Display0
Unsupported scale factor (0.000000) detected on Display1
Unsupported scale factor (0.000000) detected on Display0
Unsupported scale factor (0.000000) detected on Display1
QPainter::begin: Paint device returned engine == 0, type: 3
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.6.dev202303310056 (2023-03-31)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 83
OpenGL renderer: Apple M1 Pro
OpenGL vendor: Apple
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro18,3
Model Number: MKGQ3LL/A
Chip: Apple M1 Pro
Total Number of Cores: 10 (8 performance and 2 efficiency)
Memory: 16 GB
System Firmware Version: 8419.60.44
OS Loader Version: 8419.60.44
Software:
System Software Overview:
System Version: macOS 13.1 (22C65)
Kernel Version: Darwin 22.2.0
Time since boot: 5 days, 19 hours, 43 minutes
Graphics/Displays:
Apple M1 Pro:
Chipset Model: Apple M1 Pro
Type: GPU
Bus: Built-In
Total Number of Cores: 16
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
DELL S2340M:
Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
UI Looks like: 1920 x 1080 @ 60.00Hz
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3024 x 1964 Retina
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.12.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
build: 0.10.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 3.1.0
ChimeraX-AddCharge: 1.5.9
ChimeraX-AddH: 2.2.4
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.9.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.44
ChimeraX-AtomicLibrary: 10.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.2
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.9
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6.dev202303310056
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.12
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.9
ChimeraX-ModelPanel: 1.3.7
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.0
ChimeraX-NRRD: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10.1
ChimeraX-PDB: 2.7
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.2
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.28.4
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.1.3
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.33
debugpy: 1.6.6
decorator: 5.1.1
docutils: 0.19
executing: 1.2.0
filelock: 3.9.0
fonttools: 4.39.3
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.2.22
imagesize: 1.4.1
importlib-metadata: 6.1.0
ipykernel: 6.21.1
ipython: 8.10.0
ipython-genutils: 0.2.0
ipywidgets: 8.0.6
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.0.2
jupyter-core: 5.3.0
jupyterlab-widgets: 3.0.7
kiwisolver: 1.4.4
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.2
matplotlib: 3.6.3
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.2
networkx: 2.8.8
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 3.2.0
prompt-toolkit: 3.0.38
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.14.0
pynrrd: 1.0.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.4.2
PyQt6-Qt6: 6.4.3
PyQt6-sip: 13.4.1
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.3
python-dateutil: 2.8.2
pytz: 2023.3
pyzmq: 25.0.2
qtconsole: 5.4.0
QtPy: 2.3.1
RandomWords: 0.4.0
requests: 2.28.2
scipy: 1.9.3
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.4
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.1
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tcia-utils: 1.2.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.2
traitlets: 5.9.0
typing-extensions: 4.5.0
urllib3: 1.26.15
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.7
zipp: 3.15.0
Change History (2)
comment:1 by , 19 months ago
| Component: | Unassigned → Window Toolkit |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0 |
comment:2 by , 19 months ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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