Opened 20 months ago

Closed 19 months ago

#14776 closed defect (fixed)

AlphaFold query sequence problem

Reported by: diabellstar2500@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Structure Prediction Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

Hello. I'm user of chimera x. I have been used chimera x for alphafold
prediction. But, today alphafold prediction tool doesn't paste the query
sequences. It makes new alphafold colab web page. and it doesn't paste the
query. So I want to know how to solve this problem.

Change History (4)

comment:1 by Eric Pettersen, 20 months ago

Component: Unassigned → Structure Prediction
Owner: set to Tom Goddard
Platform: → all
Project: → ChimeraX
Status: new → assigned
Summary: (No subject) → AlphaFold query sequence problem

comment:2 by Tom Goddard, 19 months ago

ChimeraX Alphafold prediction is broken due to a change in Google Colab. I am not sure when it will get fixed, may be days or maybe in April when I am back from vacation. The problem is sending the sequence to Google Colab no longer works. I don't see any simple fix.

comment:3 by diabellstar2500@…, 19 months ago 

Thanks for your reply. I will find other ways. Have a good time.

2024년 3월 16일 (토) 오후 7:29, ChimeraX <ChimeraX-bugs-admin@cgl.ucsf.edu>님이 작성:

>
>

comment:4 by Tom Goddard, 19 months ago

Resolution: → fixed
Status: assigned → closed

Fixed in the daily build.

More details in ticket #14777.

Note: See TracTickets for help on using tickets.