![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 21 months ago
Closed 21 months ago
#14647 closed defect (duplicate)
Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-11.6-arm64-arm-64bit
ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x0000000102a9fd40 (most recent call first):
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 892 in init
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
Process: ChimeraX [17400]
Path: /Applications/ChimeraX-1.6.1.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.6.1 (1.6.1.0)
Code Type: ARM-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [17400]
User ID: 501
Date/Time: 2024-02-26 18:43:22.940 +0100
OS Version: macOS 11.6 (20G165)
Report Version: 12
Anonymous UUID: C4F220A7-216F-F6FD-FA2A-852D8B17E35D
Sleep/Wake UUID: DE389566-EFDF-4859-AC98-5D220183DD83
Time Awake Since Boot: 160000 seconds
Time Since Wake: 33000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x0000000000000018
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x18:
-->
__TEXT 102880000-102884000 [ 16K] r-x/r-x SM=COW /Applications/ChimeraX-1.6.1.app/Contents/MacOS/ChimeraX
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00000001a0dbce68 __pthread_kill + 8
1 libsystem_pthread.dylib 0x00000001a0def43c pthread_kill + 292
2 libsystem_c.dylib 0x00000001a0ccee10 raise + 32
3 libsystem_platform.dylib 0x00000001a0e3ac44 _sigtramp + 56
4 QtGui 0x0000000119a9093c QMacCGContext::QMacCGContext(QPainter*) + 40
5 libqmacstyle.dylib 0x000000011d4b282c 0x11d4a8000 + 43052
6 libqmacstyle.dylib 0x000000011d4b9fec 0x11d4a8000 + 73708
7 QtWidgets 0x0000000119201630 QCommonStyle::drawControl(QStyle::ControlElement, QStyleOption const*, QPainter*, QWidget const*) const + 2132
8 libqmacstyle.dylib 0x000000011d4b779c 0x11d4a8000 + 63388
9 QtWidgets 0x000000011923d580 0x119190000 + 710016
10 QtWidgets 0x0000000119367f58 QTabBar::paintEvent(QPaintEvent*) + 1584
11 QtWidgets 0x00000001191e41ac QWidget::event(QEvent*) + 132
12 QtWidgets 0x00000001193677b8 QTabBar::event(QEvent*) + 736
13 QtWidgets 0x000000011919a710 QApplicationPrivate::notify_helper(QObject*, QEvent*) + 272
14 QtWidgets 0x000000011919c1ec QApplication::notify(QObject*, QEvent*) + 3396
15 QtWidgets.abi3.so 0x0000000118ccc6b8 sipQApplication::notify(QObject*, QEvent*) + 248
16 QtCore 0x0000000116730e9c QCoreApplication::notifyInternal2(QObject*, QEvent*) + 292
17 QtWidgets 0x00000001191d743c QWidgetPrivate::drawWidget(QPaintDevice*, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 3312
18 QtWidgets 0x00000001191deacc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 864
19 QtWidgets 0x00000001191d753c QWidgetPrivate::drawWidget(QPaintDevice*, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 3568
20 QtWidgets 0x00000001191deacc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 864
21 QtWidgets 0x00000001191d753c QWidgetPrivate::drawWidget(QPaintDevice*, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 3568
22 QtWidgets 0x00000001191deacc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 864
23 QtWidgets 0x00000001191d753c QWidgetPrivate::drawWidget(QPaintDevice*, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 3568
24 QtWidgets 0x00000001191deacc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 864
25 QtWidgets 0x00000001191d753c QWidgetPrivate::drawWidget(QPaintDevice*, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 3568
26 QtWidgets 0x00000001191deacc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 864
27 QtWidgets 0x00000001191de9bc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 592
28 QtWidgets 0x00000001191de9bc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 592
29 QtWidgets 0x00000001191de9bc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 592
30 QtWidgets 0x00000001191de9bc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 592
31 QtWidgets 0x00000001191de9bc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 592
32 QtWidgets 0x00000001191de9bc QWidgetPrivate::paintSiblingsRecursive(QPaintDevice*, QList const&, int, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 592
33 QtWidgets 0x00000001191d753c QWidgetPrivate::drawWidget(QPaintDevice*, QRegion const&, QPoint const&, QFlags, QPainter*, QWidgetRepaintManager*) + 3568
34 QtWidgets 0x00000001191f4d48 QWidgetRepaintManager::paintAndFlush() + 3904
35 QtWidgets 0x00000001191f4fcc QWidgetRepaintManager::sync() + 252
36 QtWidgets 0x00000001191e464c QWidget::event(QEvent*) + 1316
37 QtWidgets 0x0000000119300620 QMainWindow::event(QEvent*) + 248
38 QtWidgets.abi3.so 0x0000000118c172c0 sipQMainWindow::event(QEvent*) + 224
39 QtWidgets 0x000000011919a710 QApplicationPrivate::notify_helper(QObject*, QEvent*) + 272
40 QtWidgets 0x000000011919c1ec QApplication::notify(QObject*, QEvent*) + 3396
41 QtWidgets.abi3.so 0x0000000118ccc6b8 sipQApplication::notify(QObject*, QEvent*) + 248
42 QtCore 0x0000000116730e9c QCoreApplication::notifyInternal2(QObject*, QEvent*) + 292
43 QtWidgets 0x00000001191f1a3c QWidgetRepaintManager::sendUpdateRequest(QWidget*, QWidgetRepaintManager::UpdateTime) + 604
44 QtWidgets 0x00000001191f177c void QWidgetRepaintManager::markDirty(QRect const&, QWidget*, QWidgetRepaintManager::UpdateTime, QWidgetRepaintManager::BufferState) + 1748
45 QtWidgets 0x00000001191fb018 0x119190000 + 438296
46 QtCore 0x000000011677a718 0x1166c8000 + 730904
47 QtGui 0x000000011980a4a4 QWindowPrivate::emitScreenChangedRecursion(QScreen*) + 80
48 QtGui 0x0000000119800028 QScreen::~QScreen() + 700
49 QtGui 0x0000000119800090 QScreen::~QScreen() + 12
50 QtGui 0x000000011981495c QWindowSystemInterface::handleScreenRemoved(QPlatformScreen*) + 36
51 libqcocoa.dylib 0x000000011b6bbca8 0x11b68c000 + 195752
52 libqcocoa.dylib 0x000000011b6ba4f8 0x11b68c000 + 189688
53 libqcocoa.dylib 0x000000011b6cefe0 0x11b68c000 + 274400
54 QtCore 0x000000011673fdb4 QMetaMethod::invoke(QObject*, Qt::ConnectionType, QGenericReturnArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument) const + 1072
55 libqcocoa.dylib 0x000000011b6d2454 0x11b68c000 + 287828
56 com.apple.Foundation 0x00000001a1c6a104 -[__NSObserver _doit:] + 348
57 com.apple.CoreFoundation 0x00000001a0ee1f08 __CFNOTIFICATIONCENTER_IS_CALLING_OUT_TO_AN_OBSERVER__ + 28
58 com.apple.CoreFoundation 0x00000001a0f83e5c ___CFXRegistrationPost_block_invoke + 52
59 com.apple.CoreFoundation 0x00000001a0f83dc8 _CFXRegistrationPost + 456
60 com.apple.CoreFoundation 0x00000001a0eb09d8 _CFXNotificationPost + 720
61 com.apple.Foundation 0x00000001a1c3c3c0 -[NSNotificationCenter postNotificationName:object:userInfo:] + 64
62 com.apple.AppKit 0x00000001a391f250 __67-[NSWindow _updateSettingsSendingScreenChangeNotificationToScreen:]_block_invoke + 644
63 com.apple.AppKit 0x00000001a3730cf4 NSPerformVisuallyAtomicChange + 140
64 com.apple.AppKit 0x00000001a391efc0 -[NSWindow _updateSettingsSendingScreenChangeNotificationToScreen:] + 96
65 com.apple.AppKit 0x00000001a37326cc -[NSWindow _setFrameCommon:display:fromServer:] + 2144
66 com.apple.AppKit 0x00000001a3a82694 -[NSWindow _adjustWindowToScreen] + 1188
67 com.apple.AppKit 0x00000001a3aa9a1c -[NSWindow _displayChangedSoAdjustWindows:] + 116
68 com.apple.AppKit 0x00000001a420b950 ___NSApplicationPerformScreenInvalidationReactions_block_invoke + 108
69 com.apple.AppKit 0x00000001a36d7918 -[NSApplication enumerateWindowsWithOptions:usingBlock:] + 292
70 com.apple.AppKit 0x00000001a420b3cc ___NSApplicationReactToScreenInvalidation_block_invoke + 640
71 com.apple.AppKit 0x00000001a420aed0 _NSApplicationReactToScreenInvalidation + 300
72 com.apple.AppKit 0x00000001a420b0c4 -[NSApplication(ScreenHandling) _reactToDisplayChanges:] + 396
73 com.apple.AppKit 0x00000001a3dca1ec _NSCGSDisplayConfigurationUpdateAndInvokeObservers + 456
74 com.apple.AppKit 0x00000001a3dca590 _NSCGSDisplayConfigurationDidReconfigureNotificationHandler + 328
75 com.apple.SkyLight 0x00000001a56c48cc (anonymous namespace)::notify_datagram_handler(unsigned int, CGSDatagramType, void*, unsigned long, void*) + 916
76 com.apple.SkyLight 0x00000001a596a1d4 CGSDatagramReadStream::dispatchMainQueueDatagrams() + 228
77 com.apple.SkyLight 0x00000001a596a0d0 invocation function for block in CGSDatagramReadStream::mainQueueWakeup() + 28
78 libdispatch.dylib 0x00000001a0c3e128 _dispatch_call_block_and_release + 32
79 libdispatch.dylib 0x00000001a0c3fec0 _dispatch_client_callout + 20
80 libdispatch.dylib 0x00000001a0c4e314 _dispatch_main_queue_callback_4CF + 884
81 com.apple.CoreFoundation 0x00000001a0f2d8e8 __CFRUNLOOP_IS_SERVICING_THE_MAIN_DISPATCH_QUEUE__ + 16
82 com.apple.CoreFoundation 0x00000001a0eec2fc __CFRunLoopRun + 2524
83 com.apple.CoreFoundation 0x00000001a0eeb1a8 CFRunLoopRunSpecific + 600
84 com.apple.HIToolbox 0x00000001a8e10b40 RunCurrentEventLoopInMode + 292
85 com.apple.HIToolbox 0x00000001a8e108b4 ReceiveNextEventCommon + 552
86 com.apple.HIToolbox 0x00000001a8e10674 _BlockUntilNextEventMatchingListInModeWithFilter + 72
87 com.apple.AppKit 0x00000001a36dd660 _DPSNextEvent + 836
88 com.apple.AppKit 0x00000001a36dc000 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1292
89 com.apple.AppKit 0x00000001a36cde4c -[NSApplication run] + 596
90 libqcocoa.dylib 0x000000011b6a1010 0x11b68c000 + 86032
91 QtCore 0x000000011673a2c0 QEventLoop::exec(QFlags) + 532
92 QtCore 0x0000000116731538 QCoreApplication::exec() + 128
93 QtWidgets.abi3.so 0x0000000118dd1eac meth_QApplication_exec(_object*, _object*) + 96
94 org.python.python 0x0000000102b731dc cfunction_call + 172
95 org.python.python 0x0000000102b30870 _PyObject_MakeTpCall + 360
96 org.python.python 0x0000000102c06bc8 call_function + 512
97 org.python.python 0x0000000102c04208 _PyEval_EvalFrameDefault + 23108
98 org.python.python 0x0000000102b30ffc function_code_fastcall + 112
99 org.python.python 0x0000000102b32f60 method_vectorcall + 168
100 org.python.python 0x0000000102c06b68 call_function + 416
101 org.python.python 0x0000000102c04208 _PyEval_EvalFrameDefault + 23108
102 org.python.python 0x0000000102c07a90 _PyEval_EvalCode + 2988
103 org.python.python 0x0000000102b30f80 _PyFunction_Vectorcall + 256
104 org.python.python 0x0000000102c06b68 call_function + 416
105 org.python.python 0x0000000102c04284 _PyEval_EvalFrameDefault + 23232
106 org.python.python 0x0000000102c07a90 _PyEval_EvalCode + 2988
107 org.python.python 0x0000000102bfe6fc PyEval_EvalCode + 80
108 org.python.python 0x0000000102bfb4a4 builtin_exec + 672
109 org.python.python 0x0000000102b7298c cfunction_vectorcall_FASTCALL + 232
110 org.python.python 0x0000000102c06b68 call_function + 416
111 org.python.python 0x0000000102c04284 _PyEval_EvalFrameDefault + 23232
112 org.python.python 0x0000000102c07a90 _PyEval_EvalCode + 2988
113 org.python.python 0x0000000102b30f80 _PyFunction_Vectorcall + 256
114 org.python.python 0x0000000102c06b68 call_function + 416
115 org.python.python 0x0000000102c04284 _PyEval_EvalFrameDefault + 23232
116 org.python.python 0x0000000102c07a90 _PyEval_EvalCode + 2988
117 org.python.python 0x0000000102b30f80 _PyFunction_Vectorcall + 256
118 org.python.python 0x0000000102c61ea4 pymain_run_module + 200
119 org.python.python 0x0000000102c614e8 Py_RunMain + 764
120 org.python.python 0x0000000102c61d54 pymain_main + 340
121 org.python.python 0x0000000102c61bf4 Py_Main + 36
122 edu.ucsf.cgl.ChimeraX 0x0000000102883d54 main + 128
123 libdyld.dylib 0x00000001a0e0d430 start + 4
Thread 1:
0 libsystem_kernel.dylib 0x00000001a0db8548 __psynch_cvwait + 8
1 libsystem_pthread.dylib 0x00000001a0defdac _pthread_cond_wait + 1248
2 libopenblas64_.0.dylib 0x0000000103a95b60 blas_thread_server + 360
3 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
4 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 2:
0 libsystem_kernel.dylib 0x00000001a0db8548 __psynch_cvwait + 8
1 libsystem_pthread.dylib 0x00000001a0defdac _pthread_cond_wait + 1248
2 libopenblas64_.0.dylib 0x0000000103a95b60 blas_thread_server + 360
3 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
4 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 3:
0 libsystem_kernel.dylib 0x00000001a0db8548 __psynch_cvwait + 8
1 libsystem_pthread.dylib 0x00000001a0defdac _pthread_cond_wait + 1248
2 libopenblas64_.0.dylib 0x0000000103a95b60 blas_thread_server + 360
3 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
4 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 4:
0 libsystem_kernel.dylib 0x00000001a0db8548 __psynch_cvwait + 8
1 libsystem_pthread.dylib 0x00000001a0defdac _pthread_cond_wait + 1248
2 libopenblas64_.0.dylib 0x0000000103a95b60 blas_thread_server + 360
3 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
4 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 5:
0 libsystem_kernel.dylib 0x00000001a0db8548 __psynch_cvwait + 8
1 libsystem_pthread.dylib 0x00000001a0defdac _pthread_cond_wait + 1248
2 libopenblas64_.0.dylib 0x0000000103a95b60 blas_thread_server + 360
3 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
4 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 6:
0 libsystem_kernel.dylib 0x00000001a0db8548 __psynch_cvwait + 8
1 libsystem_pthread.dylib 0x00000001a0defdac _pthread_cond_wait + 1248
2 libopenblas64_.0.dylib 0x0000000103a95b60 blas_thread_server + 360
3 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
4 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 7:
0 libsystem_kernel.dylib 0x00000001a0db8548 __psynch_cvwait + 8
1 libsystem_pthread.dylib 0x00000001a0defdac _pthread_cond_wait + 1248
2 libopenblas64_.0.dylib 0x0000000103a95b60 blas_thread_server + 360
3 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
4 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 8:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00000001a0dbfee8 kevent64 + 8
1 QtWebEngineCore 0x00000001715b1b50 0x16da6c000 + 62151504
2 QtWebEngineCore 0x00000001715b19f0 0x16da6c000 + 62151152
3 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
4 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
5 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
6 QtWebEngineCore 0x0000000171564778 0x16da6c000 + 61835128
7 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
8 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
9 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
10 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 9:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715702ec 0x16da6c000 + 61883116
4 QtWebEngineCore 0x0000000171570df8 0x16da6c000 + 61885944
5 QtWebEngineCore 0x000000017157090c 0x16da6c000 + 61884684
6 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
7 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
8 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 10:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00000001a0dbfee8 kevent64 + 8
1 QtWebEngineCore 0x00000001715b1b50 0x16da6c000 + 62151504
2 QtWebEngineCore 0x00000001715b19f0 0x16da6c000 + 62151152
3 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
4 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
5 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
6 QtWebEngineCore 0x000000016f278000 0x16da6c000 + 25214976
7 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
8 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
9 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
10 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 11:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715ab658 0x16da6c000 + 62125656
4 QtWebEngineCore 0x00000001714ec1d4 0x16da6c000 + 61342164
5 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
6 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
7 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
8 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
9 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
10 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
11 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 12:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715702ec 0x16da6c000 + 61883116
4 QtWebEngineCore 0x0000000171570df8 0x16da6c000 + 61885944
5 QtWebEngineCore 0x0000000171570990 0x16da6c000 + 61884816
6 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
7 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
8 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 13:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715ab658 0x16da6c000 + 62125656
4 QtWebEngineCore 0x00000001714ec1d4 0x16da6c000 + 61342164
5 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
6 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
7 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
8 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
9 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
10 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
11 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 14:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00000001a0dbfee8 kevent64 + 8
1 QtWebEngineCore 0x00000001715b1b50 0x16da6c000 + 62151504
2 QtWebEngineCore 0x00000001715b19f0 0x16da6c000 + 62151152
3 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
4 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
5 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
6 QtWebEngineCore 0x0000000173bd2fd4 0x16da6c000 + 102133716
7 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
8 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
9 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
10 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 15:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00000001a0db8548 __psynch_cvwait + 8
1 libsystem_pthread.dylib 0x00000001a0defdac _pthread_cond_wait + 1248
2 QtWebEngineCore 0x00000001715a4344 0x16da6c000 + 62096196
3 QtWebEngineCore 0x00000001732f36a8 0x16da6c000 + 92829352
4 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
5 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
6 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 16:: ThreadPoolSingleThreadSharedForeground0
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715702ec 0x16da6c000 + 61883116
4 QtWebEngineCore 0x0000000171570df8 0x16da6c000 + 61885944
5 QtWebEngineCore 0x00000001715709bc 0x16da6c000 + 61884860
6 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
7 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
8 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 17:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715ab658 0x16da6c000 + 62125656
4 QtWebEngineCore 0x00000001714ec1d4 0x16da6c000 + 61342164
5 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
6 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
7 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
8 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
9 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
10 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
11 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 18:: VizCompositorThread
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001714ec170 0x16da6c000 + 61342064
4 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
5 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
6 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
7 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
8 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
9 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
10 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 19:: NetworkService
0 libsystem_kernel.dylib 0x00000001a0dbfee8 kevent64 + 8
1 QtWebEngineCore 0x00000001715b1b50 0x16da6c000 + 62151504
2 QtWebEngineCore 0x00000001715b19f0 0x16da6c000 + 62151152
3 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
4 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
5 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
6 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
7 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
8 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
9 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 20:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715ab658 0x16da6c000 + 62125656
4 QtWebEngineCore 0x00000001714ec1d4 0x16da6c000 + 61342164
5 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
6 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
7 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
8 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
9 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
10 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
11 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 21:: ThreadPoolSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715702ec 0x16da6c000 + 61883116
4 QtWebEngineCore 0x0000000171570df8 0x16da6c000 + 61885944
5 QtWebEngineCore 0x00000001715709e8 0x16da6c000 + 61884904
6 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
7 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
8 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 22:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715ab658 0x16da6c000 + 62125656
4 QtWebEngineCore 0x00000001714ec1d4 0x16da6c000 + 61342164
5 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
6 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
7 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
8 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
9 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
10 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
11 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 23:: MemoryInfra
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715ab658 0x16da6c000 + 62125656
4 QtWebEngineCore 0x00000001714ec1d4 0x16da6c000 + 61342164
5 QtWebEngineCore 0x00000001715599ec 0x16da6c000 + 61790700
6 QtWebEngineCore 0x000000017151b490 0x16da6c000 + 61535376
7 QtWebEngineCore 0x000000017157c514 0x16da6c000 + 61932820
8 QtWebEngineCore 0x000000017157c68c 0x16da6c000 + 61933196
9 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
10 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
11 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 24:: ThreadPoolSingleThreadSharedBackgroundBlocking2
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715702ec 0x16da6c000 + 61883116
4 QtWebEngineCore 0x0000000171570b04 0x16da6c000 + 61885188
5 QtWebEngineCore 0x0000000171570938 0x16da6c000 + 61884728
6 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
7 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
8 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 25:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 com.apple.CoreFoundation 0x00000001a0eed910 __CFRunLoopServiceMachPort + 372
3 com.apple.CoreFoundation 0x00000001a0eebddc __CFRunLoopRun + 1212
4 com.apple.CoreFoundation 0x00000001a0eeb1a8 CFRunLoopRunSpecific + 600
5 com.apple.AppKit 0x00000001a385c334 _NSEventThread + 196
6 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
7 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 26:
0 libsystem_pthread.dylib 0x00000001a0dea5cc start_wqthread + 0
Thread 27:
0 libsystem_pthread.dylib 0x00000001a0dea5cc start_wqthread + 0
Thread 28:
0 libsystem_pthread.dylib 0x00000001a0dea5cc start_wqthread + 0
Thread 29:
0 libsystem_pthread.dylib 0x00000001a0dea5cc start_wqthread + 0
Thread 30:
0 libsystem_pthread.dylib 0x00000001a0dea5cc start_wqthread + 0
Thread 31:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00000001a0db4dd4 mach_msg_trap + 8
1 libsystem_kernel.dylib 0x00000001a0db5184 mach_msg + 76
2 QtWebEngineCore 0x00000001715ab86c 0x16da6c000 + 62126188
3 QtWebEngineCore 0x00000001715702ec 0x16da6c000 + 61883116
4 QtWebEngineCore 0x0000000171570df8 0x16da6c000 + 61885944
5 QtWebEngineCore 0x0000000171570990 0x16da6c000 + 61884816
6 QtWebEngineCore 0x00000001715a57a8 0x16da6c000 + 62101416
7 libsystem_pthread.dylib 0x00000001a0def878 _pthread_start + 320
8 libsystem_pthread.dylib 0x00000001a0dea5e0 thread_start + 8
Thread 32:
0 libsystem_pthread.dylib 0x00000001a0dea5cc start_wqthread + 0
Thread 33:
0 libsystem_pthread.dylib 0x00000001a0dea5cc start_wqthread + 0
Thread 0 crashed with ARM Thread State (64-bit):
x0: 0x0000000000000000 x1: 0x0000000000000000 x2: 0x0000000000000001 x3: 0x00000001a0e37ead
x4: 0x000000016d577178 x5: 0x5cd6d5760b8ed56d x6: 0x0000000000000000 x7: 0x000000016d576938
x8: 0x67bf1338f2dbac1c x9: 0x67bf1339f072515c x10: 0x0000000000001bba x11: 0x0000000217d47b5e
x12: 0x0000000217d47b5e x13: 0x0000000000000004 x14: 0x0000000000000881 x15: 0x000000008000001f
x16: 0x0000000000000148 x17: 0x000000020f876e90 x18: 0x000000011d63e83c x19: 0x000000000000000b
x20: 0x0000000102a9fd40 x21: 0x0000000000000103 x22: 0x0000000102a9fe20 x23: 0x000000012de9a6f0
x24: 0x0000000000000001 x25: 0x0000000000008001 x26: 0x0000000000008000 x27: 0x000000020c245848
x28: 0x0000000000000000 fp: 0x000000016d5770b0 lr: 0x00000001a0def43c
sp: 0x000000016d577090 pc: 0x00000001a0dbce68 cpsr: 0x40000000
far: 0x000000016faf23b0 esr: 0x56000080
Binary Images:
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0x104ed0000 - 0x1051c7fff +libgfortran.5.dylib (0) /Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/.dylibs/libgfortran.5.dylib
0x1051f4000 - 0x1051fffff +libgcc_s.2.dylib (0) /Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/.dylibs/libgcc_s.2.dylib
0x113250000 - 0x113263fff +_datetime.cpython-39-darwin.so (0) /Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/lib-dynload/_datetime.cpython-39-darwin.so
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0x1bbbcd000 - 0x1bbc18fff com.apple.Safari.SafeBrowsing (16611 - 16611.3.10.1.6) /System/Library/PrivateFrameworks/SafariSafeBrowsing.framework/Versions/A/SafariSafeBrowsing
0x1bbc19000 - 0x1bc400fff com.apple.WebKit (16611 - 16611.3.10.1.6) /System/Library/Frameworks/WebKit.framework/Versions/A/WebKit
0x1bc543000 - 0x1bc5c2fff com.apple.CorePDF (4.0 - 529) /System/Library/PrivateFrameworks/CorePDF.framework/Versions/A/CorePDF
0x1bc5c3000 - 0x1bc5c6fff com.apple.print.framework.Print (15 - 271) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print
0x1bc5c7000 - 0x1bc5cafff com.apple.Carbon (160 - 164) /System/Library/Frameworks/Carbon.framework/Versions/A/Carbon
0x1bc6cb000 - 0x1bc6cbfff com.apple.avfoundation (2.0 - 2020.10) /System/Library/Frameworks/AVFoundation.framework/Versions/A/AVFoundation
0x1bc891000 - 0x1bc8adfff com.apple.private.SystemPolicy (1.0 - 1) /System/Library/PrivateFrameworks/SystemPolicy.framework/Versions/A/SystemPolicy
0x1bc9f4000 - 0x1bca4cfff com.apple.AccessibilitySharedSupport (1.0 - 1) /System/Library/PrivateFrameworks/AccessibilitySharedSupport.framework/Versions/A/AccessibilitySharedSupport
0x1bca4d000 - 0x1bca6cfff com.apple.sidecar-core (1.0 - 231) /System/Library/PrivateFrameworks/SidecarCore.framework/Versions/A/SidecarCore
0x1bca6d000 - 0x1bca74fff com.apple.QuickLookNonBaseSystem (1.0 - 1) /System/Library/PrivateFrameworks/QuickLookNonBaseSystem.framework/Versions/A/QuickLookNonBaseSystem
0x1bca75000 - 0x1bcaa8fff com.apple.datadetectors (5.0 - 423) /System/Library/PrivateFrameworks/DataDetectors.framework/Versions/A/DataDetectors
0x1bcea6000 - 0x1bceaafff com.apple.CoreOptimization (1.0 - 1) /System/Library/PrivateFrameworks/CoreOptimization.framework/Versions/A/CoreOptimization
0x1bceab000 - 0x1bceb0fff com.apple.FeatureFlagsSupport (1.0 - 28.60.1) /System/Library/PrivateFrameworks/FeatureFlagsSupport.framework/Versions/A/FeatureFlagsSupport
0x1bcfe3000 - 0x1bd023fff com.apple.NaturalLanguage (1.0 - 84) /System/Library/Frameworks/NaturalLanguage.framework/Versions/A/NaturalLanguage
0x1bd024000 - 0x1bd03ffff com.apple.SafariServices.framework (16611 - 16611.3.10.1.6) /System/Library/Frameworks/SafariServices.framework/Versions/A/SafariServices
0x1bd1fe000 - 0x1bd209fff com.apple.MallocStackLogging (1.0 - 1) /System/Library/PrivateFrameworks/MallocStackLogging.framework/Versions/A/MallocStackLogging
0x1bd21e000 - 0x1bd230fff libmis.dylib (274.140.2) /usr/lib/libmis.dylib
0x1bd24e000 - 0x1bd382fff com.apple.CoreHandwriting (161 - 1.2) /System/Library/PrivateFrameworks/CoreHandwriting.framework/Versions/A/CoreHandwriting
0x1bd383000 - 0x1bd589fff com.apple.imageKit (3.0 - 1100) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/ImageKit.framework/Versions/A/ImageKit
0x1bd58a000 - 0x1bd694fff com.apple.PencilKit (1.0 - 1) /System/Library/Frameworks/PencilKit.framework/Versions/A/PencilKit
0x1bd695000 - 0x1bd6a6fff com.apple.sidecar-ui (1.0 - 231) /System/Library/PrivateFrameworks/SidecarUI.framework/Versions/A/SidecarUI
0x1bd6b2000 - 0x1bd6b5fff com.apple.WebInspectorUI (16611 - 16611.3.10.1.6) /System/Library/PrivateFrameworks/WebInspectorUI.framework/Versions/A/WebInspectorUI
0x1bdcfa000 - 0x1bdd53fff com.apple.ImageCaptureCore (1711.5.2 - 1711.5.2) /System/Library/Frameworks/ImageCaptureCore.framework/Versions/A/ImageCaptureCore
0x1bdd54000 - 0x1bdd79fff com.apple.quartzfilters (1.10.0 - 98) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzFilters.framework/Versions/A/QuartzFilters
0x1bdf50000 - 0x1bdfc6fff com.apple.Safari.Core (16611 - 16611.3.10.1.6) /System/Library/PrivateFrameworks/SafariCore.framework/Versions/A/SafariCore
0x1bdfc7000 - 0x1be139fff com.apple.MediaPlayer (1.0 - 1.0) /System/Library/Frameworks/MediaPlayer.framework/Versions/A/MediaPlayer
0x1be13a000 - 0x1be3fefff com.apple.iTunesCloud (1.0 - 1) /System/Library/PrivateFrameworks/iTunesCloud.framework/Versions/A/iTunesCloud
0x1be452000 - 0x1be56efff com.apple.AnnotationKit (1.0 - 383.6) /System/Library/PrivateFrameworks/AnnotationKit.framework/Versions/A/AnnotationKit
0x1be56f000 - 0x1bea27fff com.apple.QuartzComposer (5.1 - 383) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzComposer.framework/Versions/A/QuartzComposer
0x1bea28000 - 0x1beb08fff com.apple.PDFKit (1.0 - 950.40.3) /System/Library/Frameworks/PDFKit.framework/Versions/A/PDFKit
0x1bf865000 - 0x1bf8e7fff com.apple.TextInput (1.0 - 1.0) /System/Library/PrivateFrameworks/TextInput.framework/Versions/A/TextInput
0x1c04a6000 - 0x1c04b2fff com.apple.CaptiveNetworkSupport (13.0 - 1) /System/Library/PrivateFrameworks/CaptiveNetwork.framework/Versions/A/CaptiveNetwork
0x1c0864000 - 0x1c087cfff com.apple.LookupFramework (1.2 - 284.1) /System/Library/PrivateFrameworks/Lookup.framework/Versions/A/Lookup
0x1c087d000 - 0x1c08adfff libncurses.5.4.dylib (57) /usr/lib/libncurses.5.4.dylib
0x1c0912000 - 0x1c0915fff com.apple.quartzframework (1.5 - 25) /System/Library/Frameworks/Quartz.framework/Versions/A/Quartz
0x1c0c11000 - 0x1c0c2afff libCGInterfaces.dylib (544.4) /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/Libraries/libCGInterfaces.dylib
0x1c22e3000 - 0x1c2ecefff libfaceCore.dylib (4.3.1) /System/Library/Frameworks/Vision.framework/libfaceCore.dylib
0x1c2ecf000 - 0x1c2fcafff com.apple.TextRecognition (1.0 - 157) /System/Library/PrivateFrameworks/TextRecognition.framework/Versions/A/TextRecognition
0x1c2fcb000 - 0x1c2fe2fff com.apple.Futhark (1.0 - 1) /System/Library/PrivateFrameworks/Futhark.framework/Versions/A/Futhark
0x1c2fe3000 - 0x1c3043fff com.apple.DifferentialPrivacy (1.0 - 1) /System/Library/PrivateFrameworks/DifferentialPrivacy.framework/Versions/A/DifferentialPrivacy
0x1c3044000 - 0x1c305ffff com.apple.SafariFoundation (16611 - 16611.3.10.1.6) /System/Library/PrivateFrameworks/SafariFoundation.framework/Versions/A/SafariFoundation
0x1c3060000 - 0x1c3066fff com.apple.SafariPlatformSupport.framework (16611 - ???) /System/Library/PrivateFrameworks/SafariPlatformSupport.framework/Versions/A/SafariPlatformSupport
0x1c3067000 - 0x1c3286fff com.apple.RawCamera.bundle (9.10.0 - 1450.3) /System/Library/CoreServices/RawCamera.bundle/Contents/MacOS/RawCamera
0x1c333a000 - 0x1c33b2fff com.apple.ShareKit (668 - 668) /System/Library/PrivateFrameworks/ShareKit.framework/Versions/A/ShareKit
0x1c3b2f000 - 0x1c3b33fff com.apple.DAAPKit (1.0 - 1) /System/Library/PrivateFrameworks/DAAPKit.framework/Versions/A/DAAPKit
0x1c5453000 - 0x1c5456fff libpmenergy.dylib (227.140.1) /usr/lib/libpmenergy.dylib
0x1c70e3000 - 0x1c711efff com.apple.osanalytics.OSAnalytics (1.0 - 1) /System/Library/PrivateFrameworks/OSAnalytics.framework/Versions/A/OSAnalytics
0x1c7968000 - 0x1c7983fff com.apple.network.statistics.framework (1.2 - 1) /System/Library/PrivateFrameworks/NetworkStatistics.framework/Versions/A/NetworkStatistics
0x1ce084000 - 0x1ce08dfff com.apple.Reveal (1.0 - 22) /System/Library/PrivateFrameworks/Reveal.framework/Versions/A/Reveal
0x1ce08e000 - 0x1ce093fff com.apple.RevealCore (1.0 - 22) /System/Library/PrivateFrameworks/RevealCore.framework/Versions/A/RevealCore
0x1d09b4000 - 0x1d09e1fff com.apple.HelpData (2.3 - 201) /System/Library/PrivateFrameworks/HelpData.framework/Versions/A/HelpData
0x1d09e2000 - 0x1d09fcfff com.apple.shortcut (2.16 - 118) /System/Library/PrivateFrameworks/Shortcut.framework/Versions/A/Shortcut
0x1d09fd000 - 0x1d0a9bfff com.apple.Symbolication (12.5 - 64544.70.1) /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication
0x1d0c99000 - 0x1d0c9cfff libpmsample.dylib (227.140.1) /usr/lib/libpmsample.dylib
0x1d31be000 - 0x1d31f8fff com.apple.ReplayKit (1.0 - 1) /System/Library/Frameworks/ReplayKit.framework/Versions/A/ReplayKit
0x1d483e000 - 0x1d4841fff com.apple.ForceFeedback (1.0.6 - 1.0.6) /System/Library/Frameworks/ForceFeedback.framework/Versions/A/ForceFeedback
0x1e0c52000 - 0x1e0c56fff libmetal_timestamp.dylib (31001.192.1) /System/Library/PrivateFrameworks/GPUCompiler.framework/Versions/31001/Libraries/libmetal_timestamp.dylib
0x1e2ea4000 - 0x1e2eaafff libCoreFSCache.dylib (200.11) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreFSCache.dylib
0x1e2eab000 - 0x1e2eb0fff libCoreVMClient.dylib (200.11) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreVMClient.dylib
0x1e2eb1000 - 0x1e2ec0fff com.apple.opengl (18.5.9 - 18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x1e2ec1000 - 0x1e2ec3fff libCVMSPluginSupport.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib
0x1e2ec4000 - 0x1e2eccfff libGFXShared.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib
0x1e2ecd000 - 0x1e2f05fff libGLImage.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib
0x1e2f06000 - 0x1e2f3efff libGLU.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
0x1e2f3f000 - 0x1e30abfff libGLProgrammability.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib
0x1e30ac000 - 0x1e30b6fff libGL.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib
0x1e30b7000 - 0x1e3221fff GLEngine (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLEngine.bundle/GLEngine
0x1e3222000 - 0x1e3246fff GLRendererFloat (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLRendererFloat.bundle/GLRendererFloat
0x1e3247000 - 0x1e32a6fff com.apple.opencl (4.6 - 4.6) /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL
0x1e3d25000 - 0x1e3d2cfff com.apple.agl (3.3.4 - AGL-3.3.3) /System/Library/Frameworks/AGL.framework/Versions/A/AGL
0x1e3d2d000 - 0x1e3e13fff com.apple.audio.AVFAudio (1.0 - 477.88) /System/Library/Frameworks/AVFAudio.framework/Versions/A/AVFAudio
0x1e62f5000 - 0x1e6300fff com.apple.CMImaging (1.0 - 82.6) /System/Library/PrivateFrameworks/CMImaging.framework/Versions/A/CMImaging
0x1ec500000 - 0x1ec50bfff com.apple.SymptomAnalytics (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomAnalytics.framework/Versions/A/SymptomAnalytics
0x1ec725000 - 0x1ec73efff com.apple.SymptomPresentationFeed (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomPresentationFeed.framework/Versions/A/SymptomPresentationFeed
0x1f431a000 - 0x1f4321fff libRosetta.dylib (203.58) /usr/lib/libRosetta.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%)
Writable regions: Total=2.3G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.3G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 1280K 10
Activity Tracing 256K 1
CG backing stores 6640K 13
CG image 2144K 60
CoreAnimation 6160K 173
CoreGraphics 64K 4
CoreImage 96K 6
CoreUI image data 2720K 39
Foundation 48K 2
Kernel Alloc Once 32K 1
MALLOC 718.5M 290
MALLOC guard page 192K 10
MALLOC_MEDIUM (reserved) 640.0M 8 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Mach message 64K 4
OpenGL GLSL 384K 4
STACK GUARD 56.5M 34
Stack 160.2M 34
VM_ALLOCATE 226.1M 483
VM_ALLOCATE (reserved) 160.0M 1 reserved VM address space (unallocated)
__AUTH 1109K 289
__AUTH_CONST 18.7M 486
__DATA 19.2M 618
__DATA_CONST 26.7M 622
__DATA_DIRTY 2003K 234
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 517.5M 144
__OBJC_CONST 3558K 277
__OBJC_RO 75.1M 1
__OBJC_RW 2576K 1
__TEXT 646.7M 643
__UNICODE 588K 1
mapped file 316.8M 66
shared memory 3216K 27
=========== ======= =======
TOTAL 3.9G 4589
TOTAL, minus reserved VM space 2.8G 4589
System Profile:
Network Service: Targus USB3 DV4K DOCK w PD100W, Ethernet, en6
Network Service: Wi-Fi, AirPort, en0
Boot Volume File System Type: apfs
Memory Module: LPDDR4
USB Device: USB 3.1 Bus
USB Device: USB 3.1 Bus
USB Device: USB3.0 Hub
USB Device: USB5734
USB Device: USB3.0 Hub
USB Device: USB3.0 Hub
USB Device: USB Reader
USB Device: Targus USB3 DV4K DOCK w PD100W
USB Device: USB2.0 Hub
USB Device: USB2.0 Hub
USB Device: USB2734
USB Device: CHERRY Wired Keyboard
USB Device: Hub Controller
USB Device: HID to SPI Device
USB Device: USB Receiver
USB Device: CA Essential Webcam 1080HD-AF
USB Device: USB2.0 Hub
Thunderbolt Bus: MacBook Air, Apple Inc.
Thunderbolt Bus: MacBook Air, Apple Inc.
Model: MacBookAir10,1, BootROM 6723.140.2, proc 8:4:4 processors, 16 GB, SMC
Graphics: kHW_AppleM1Item, Apple M1, spdisplays_builtin
AirPort: spairport_wireless_card_type_airport_extreme, wl0: Aug 18 2021 22:48:53 version 18.50.40.11.7.8.123 FWID 01-3ed0e3a2
Bluetooth: Version 8.0.5d7, 3 services, 18 devices, 1 incoming serial ports
===== Log before crash start =====
Startup Messages
---
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open
> /Users/zchen/Desktop/Cryosparc/Esx-4/J3480/x4_J3480_head+membrane_0.045.mrc
> format mrc
Opened x4_J3480_head+membrane_0.045.mrc as #1, grid size 380,380,380, pixel
0.89, shown at level 0.0631, step 2, values float32
> ui tool show "Color Actions"
> help help:user/tools/coloractions.html
> color byhetero
> color #feffffff
> color #faffffff
> color #f4ffffff
> color #efffffff
> color #e9ffffff
> color #e4ffffff
> color #e0ffffff
> color #ddffffff
> color #daffffff
> color #d8ffffff
> color #d7ffffff
> color #d5ffffff
> color #d3ffffff
> color #d0ffffff
> color #cfffffff
> color #ceffffff
> color #cdffffff
> color #ccffffff
> color #cbffffff
> color #caffffff
> color #c8ffffff
> color #c7ffffff
> color #c6ffffff
> color #c5ffffff
> color #c4ffffff
> color #c5ffffff
> color #c6ffffff
> color #c7ffffff
> color #cbffffff
> color #cdffffff
> color #cfffffff
> color #d0ffffff
> color #cfffffff
> color #cdffffff
> color #ccffffff
> color #cbffffff
> color #caffffff
> color #c9ffffff
> color #c7ffffff
> color #c5ffffff
> color #c3ffffff
> color #c1ffffff
> color #bfffffff
> color #beffffff
> color #bdffffff
> color #bbffffff
> color #b9ffffff
> color #b8ffffff
> color #b6ffffff
> color #b5ffffff
> color #b4ffffff
> color #b3ffffff
> color #b2ffffff
> color #b1ffffff
> color #b0ffffff
> color #afffffff
> color #aeffffff
> color #adffffff
> color #afffffff
> color #b2ffffff
> color #b4ffffff
> color #b5ffffff
> color #b6ffffff
> color #b7ffffff
> color #b8ffffff
> color #bbffffff
> color #bcffffff
> color #bdffffff
> color #beffffff
> color #c0ffffff
> color #c1ffffff
> color #c2ffffff
> color #c3ffffff
> color #ccffffff
> color #42ffffff
> color #ffffffff
> color #fdffffff
> color #fbffffff
> color #f9ffffff
> color #f7ffffff
> color #f4ffffff
> color #f2ffffff
> color #f0ffffff
> color #efffffff
> color #eeffffff
> color #ecffffff
> color #e9ffffff
> color #e7ffffff
> color #e6ffffff
> color #e7ffffff
> color #e9ffffff
> color #eaffffff
> color #eeffffff
> color #f0ffffff
> color #f2ffffff
> color #f6ffffff
> color #f9ffffff
> color #fdffffff
> color #ffffffff
> color #fffdffff
> color #fffaffff
> color #fff8ffff
> color #fff5ffff
> color #fff3ffff
> color #fff1ffff
> color #ffefffff
> color #ffecffff
> color #ffeaffff
> color #ffe9ffff
> color #ffe7ffff
> color #ffe5ffff
> color #ffe4ffff
> color #ffe3ffff
> color #ffe2ffff
> color #ffe1ffff
> color #ffe0ffff
> color #ffe1ffff
> color #ffe3ffff
> color #ffe1ffff
> color #ffe0ffff
> color #ffdeffff
> color #ffdcffff
> color #ffdaffff
> color #ffd9ffff
> color #ffd8ffff
> color #ffd7ffff
> color #ffd6ffff
> color #ffd7ffff
> color #ffd8ffff
> color #ffd9ffff
> color #ffdaffff
> color #ffdbffff
> color #ffdcffff
> color #ffddffff
> color #ffdeffff
> color #ffdfffff
> color #ffdeffff
> color #ffddffff
> color #ffdcffff
> color #ffdbffff
> color #ffdaffff
> color #ffd8ffff
> color #ffd6ffff
> color #ffd4ffff
> color #ffd2ffff
> color #ffd0ffff
> color #ffcfffff
> color #ffceffff
> color #ffcfffff
> color #ffd2ffff
> color #ffd5ffff
> color #ffdaffff
> color #ffe0ffff
> color #ffe6ffff
> color #ffedffff
> color #fff2ffff
> color #fff7ffff
> color #fffcffff
> color #ffffffff
> color #fffffeff
> color #fffffdff
> color #fffff9ff
> color #fffff5ff
> color #ffffefff
> color #ffffebff
> color #ffffe7ff
> color #ffffe5ff
> color #ffffe3ff
> color #ffffe1ff
> color #ffffdeff
> color #ffffdbff
> color #ffffd9ff
> color #ffffd7ff
> color #ffffd5ff
> color #ffffd3ff
> color #ffffd2ff
> color #ffffd1ff
> color #ffffcfff
> color #ffffccff
> color #ffffc8ff
> color #ffffc5ff
> color #ffffc2ff
> color #ffffc1ff
> color #ffffbeff
> color #ffffbdff
> color #ffffbbff
> color #ffffb9ff
> color #ffffb8ff
> color #ffffb7ff
> color #ffffb6ff
> color #ffffb5ff
> color #ffffb3ff
> color #ffffb2ff
> color #ffffb1ff
> color #ffffb0ff
> color #ffffafff
> color #ffffaeff
> color #ffffadff
> color #ffffabff
> color #ffffa9ff
> color #ffffa7ff
> color #ffffa5ff
> color #ffffa4ff
> color #ffffa2ff
> color #ffffa1ff
> color #ffffa0ff
> color #ffff9fff
> color #ffff9eff
> color #ffff9cff
> color #ffff9aff
> color #ffff99ff
> color #ffff98ff
> color #ffff97ff
> color #ffff95ff
> color #ffff94ff
> color #ffff93ff
> color #ffff92ff
> color #ffff91ff
> color #ffff8fff
> color #ffff8eff
> color #ffff8dff
> color #ffff8cff
> color #ffff89ff
> color #ffff87ff
> color #ffff86ff
> color #ffff85ff
> color #ffff83ff
> color #ffff82ff
> color #ffff81ff
> color #ffff80ff
> color #ffff89ff
> color #ffff91ff
> color #ffff9aff
> color #ffffa9ff
> color #ffffb8ff
> color #ffffc8ff
> color #ffffd2ff
> color #ffffdaff
> color #ffffe4ff
> color #ffffebff
> color #fffff0ff
> color #fffff4ff
> color #fffff9ff
> color #fffffeff
> color #ffffffff
> color #8061ffff
> ui mousemode right translate
> ui mousemode right zoom
> lighting full
> color #aa89ffff
> color #8061ffff
> color orange
> color #8061ffff
> color #5988ffff
> color #5f76acff
> color #6376acff
> color #6476acff
> color #6576acff
> color #6676acff
> color #6876acff
> color #6976acff
> color #6b76acff
> color #6d76acff
> color #6e76acff
> color #6f76acff
> color #7076acff
> color #7176acff
> color #7276acff
> color #7376acff
> color #7476acff
> color #7576acff
> color #7676acff
> color #7776acff
> color #7876acff
> color #7976acff
> color #7a76acff
> color #7b76acff
> color #7c76acff
> color #7d76acff
> color #7e76acff
> color #8076acff
> color #8376acff
> color #8476acff
> color #8576acff
> color #8676acff
> color #8776acff
> color #8876acff
> color #8976acff
> color #ff80ffff
> color #ff82ffff
> color #ff85ffff
> color #ff87ffff
> color #ff89ffff
> color #ff8affff
> color #ff8cffff
> color #ff8dffff
> color #ff8effff
> color #ff8fffff
> color #ff91ffff
> color #ff93ffff
> color #ff94ffff
> color #ff95ffff
> color #ff96ffff
> color #ff97ffff
> color #ff99ffff
> color #ff9affff
> color #ff9cffff
> color #ff9dffff
> color #ff9effff
> color #ff9fffff
> color #ffa0ffff
> color #ffa1ffff
> color #ffa2ffff
> color #ffa3ffff
> color #ffa4ffff
> color #ffa6ffff
> color #ffa9ffff
> color #ffabffff
> color #ffacffff
> color #ffadffff
> color #ffacffff
> color #ffabffff
> color #ffaaffff
> color #ffa9ffff
> color #ffa8ffff
> color #ffa6ffff
> color #ffa5ffff
> color #ffa2ffff
> color #ff9fffff
> color #ff9cffff
> color #ff99ffff
> color #ff96ffff
> color #ff94ffff
> color #ff91ffff
> color #ff8effff
> color #ff8bffff
> color #ff87ffff
> color #ff84ffff
> color #ff81ffff
> color #ff7fffff
> color #ff7dffff
> color #ff7cffff
> color #ff7bffff
> color #ff7affff
> color #ff78ffff
> color #ff77ffff
> color #ff75ffff
> color #ff74ffff
> color #ff73ffff
> color #ff72ffff
> color #ff71ffff
> color #ff70ffff
> color #ff6fffff
> color #ff6effff
> color #ff6cffff
> color #ff6bffff
> color #ff6affff
> color #ff69ffff
> color #ff68ffff
> color #ff66ffff
> color #ff64ffff
> color #ff63ffff
> color #ff61ffff
> color #ff5fffff
> color #ff5cffff
> color #ff5affff
> color #ff57ffff
> color #ff55ffff
> color #ff52ffff
> color #ff4fffff
> color #ff4cffff
> color #ff4affff
> color #ff48ffff
> color #ff47ffff
> color #ff46ffff
> color #ff45ffff
> color #ff43ffff
> color #ff42ffff
> color #ff40ffff
> color #ff3effff
> color #ff3cffff
> color #ff3affff
> color #ff38ffff
> color #ff37ffff
> color #ff36ffff
> color #ff35ffff
> color #ff34ffff
> color #ff33ffff
> color #ff32ffff
> color #ff31ffff
> color #ff30ffff
> color #ff2fffff
> color #ff2effff
> color #ff2dffff
> color #ff2cffff
> color #ff2bffff
> color #ff2affff
> color #ff29ffff
> color #ff28ffff
> color #ff27ffff
> color #ff26ffff
> color #ff25ffff
> color #ff24ffff
> color #ff23ffff
> color #ff22ffff
> color #ff21ffff
> color #ff20ffff
> color #ff1fffff
> color #ff20ffff
> color #ff21ffff
> color #ff22ffff
> color #ff23ffff
> color #ff24ffff
> color #ff25ffff
> color #ff27ffff
> color #ff2affff
> color #ff2dffff
> color #ff32ffff
> color #ff37ffff
> color #ff3affff
> color #ff3dffff
> color #ff40ffff
> color #ff42ffff
> color #ff45ffff
> color #ff49ffff
> color #ff4cffff
> color #ff4fffff
> color #ff53ffff
> color #ff57ffff
> color #ff5affff
> color #ff5effff
> color #ff5fffff
> color #ff60ffff
> color #ff61ffff
> color #ff64ffff
> color #ff66ffff
> color #ff68ffff
> color #ff6affff
> color #ff6bffff
> color #ff6cffff
> color #ff6dffff
> color #ff6effff
> color #ff6fffff
> color #ff70ffff
> color #ff71ffff
> color #ff72ffff
> color #ff73ffff
> color #ff74ffff
> color #ff73ffff
> color #ff80ffff
> color #ff8015ff
> color #ff80ffff
> color #ff15ffff
> color red
> color gray
> open /Users/zchen/Downloads/cryosparc_P109_J3491_class_00_00122_volume.mrc
Opened cryosparc_P109_J3491_class_00_00122_volume.mrc as #2, grid size
128,128,128, pixel 2.64, shown at level 0.32, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3491_class_03_00122_volume.mrc
Opened cryosparc_P109_J3491_class_03_00122_volume.mrc as #3, grid size
128,128,128, pixel 2.64, shown at level 0.201, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3491_class_02_00122_volume.mrc
Opened cryosparc_P109_J3491_class_02_00122_volume.mrc as #4, grid size
128,128,128, pixel 2.64, shown at level 0.224, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3491_class_01_00122_volume.mrc
Opened cryosparc_P109_J3491_class_01_00122_volume.mrc as #5, grid size
128,128,128, pixel 2.64, shown at level 0.126, step 1, values float32
> ui mousemode right zoom
> hide #!1 models
> hide #!2 models
> hide #!3 models
> hide #!5 models
> show #!5 models
> close #1
> close #2
> close #3
> close #4
> close #5
> open /Users/zchen/Downloads/cryosparc_P109_J3491_class_03_00122_volume.mrc
Opened cryosparc_P109_J3491_class_03_00122_volume.mrc as #1, grid size
128,128,128, pixel 2.64, shown at level 0.201, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3491_class_02_00122_volume.mrc
Opened cryosparc_P109_J3491_class_02_00122_volume.mrc as #2, grid size
128,128,128, pixel 2.64, shown at level 0.224, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3491_class_01_00122_volume.mrc
Opened cryosparc_P109_J3491_class_01_00122_volume.mrc as #3, grid size
128,128,128, pixel 2.64, shown at level 0.126, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3491_class_00_00122_volume.mrc
Opened cryosparc_P109_J3491_class_00_00122_volume.mrc as #4, grid size
128,128,128, pixel 2.64, shown at level 0.32, step 1, values float32
> set bgColor white
> set bgColor black
> set bgColor white
> lighting full
> set bgColor white
> set bgColor black
> lighting full
> lighting soft
> lighting full
> lighting soft
> lighting full
> lighting soft
> volume #1 level 0.1719
> volume #2 level 0.1527
> volume #2 level 0.1029
> volume #3 level 0.2521
> volume #4 level 0.2286
> volume #3 level 0.1686
> volume #2 level 0.241
> volume #1 level 0.3478
> open /Users/zchen/Downloads/cryosparc_P109_J3489_class_00_final_volume.mrc
Opened cryosparc_P109_J3489_class_00_final_volume.mrc as #5, grid size
128,128,128, pixel 2.64, shown at level 0.249, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3489_class_03_final_volume.mrc
Opened cryosparc_P109_J3489_class_03_final_volume.mrc as #6, grid size
128,128,128, pixel 2.64, shown at level 0.148, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3489_class_02_final_volume.mrc
Opened cryosparc_P109_J3489_class_02_final_volume.mrc as #7, grid size
128,128,128, pixel 2.64, shown at level 0.163, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3489_class_01_final_volume.mrc
Opened cryosparc_P109_J3489_class_01_final_volume.mrc as #8, grid size
128,128,128, pixel 2.64, shown at level 0.107, step 1, values float32
> close #1
> close #2
> close #3
> close #4
> volume #5 level 0.1793
> volume #6 level 0.2234
> volume #6 level 0.09695
> volume #7 level 0.2018
> close #5
> close #6
> close #7
> close #8
> open /Users/zchen/Downloads/cryosparc_P109_J3473_class_03_00142_volume.mrc
Opened cryosparc_P109_J3473_class_03_00142_volume.mrc as #1, grid size
128,128,128, pixel 2.64, shown at level 0.22, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3473_class_02_00142_volume.mrc
Opened cryosparc_P109_J3473_class_02_00142_volume.mrc as #2, grid size
128,128,128, pixel 2.64, shown at level 0.162, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3473_class_01_00142_volume.mrc
Opened cryosparc_P109_J3473_class_01_00142_volume.mrc as #3, grid size
128,128,128, pixel 2.64, shown at level 0.267, step 1, values float32
> open /Users/zchen/Downloads/cryosparc_P109_J3473_class_00_00142_volume.mrc
Opened cryosparc_P109_J3473_class_00_00142_volume.mrc as #4, grid size
128,128,128, pixel 2.64, shown at level 0.32, step 1, values float32
Unsupported scale factor (0.000000) detected on Display0
QPainter::begin: Paint device returned engine == 0, type: 3
===== Log before crash end =====
Log:
Startup Messages
---
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/zchen/Downloads/cryosparc_P109_J3732_003_volume_map.mrc
Opened cryosparc_P109_J3732_003_volume_map.mrc as #1, grid size 380,380,380,
pixel 0.89, shown at level 0.0618, step 2, values float32
> volume #1 step 1
> volume #1 level 0.09896
> lighting soft
OpenGL version: 4.1 Metal - 71.7.1
OpenGL renderer: Apple M1
OpenGL vendor: Apple
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: MacBookAir10,1
Chip: Apple M1
Total Number of Cores: 8 (4 performance and 4 efficiency)
Memory: 16 GB
System Firmware Version: 6723.140.2
OS Loader Version: 6723.140.2
Software:
System Software Overview:
System Version: macOS 11.6 (20G165)
Kernel Version: Darwin 20.6.0
Time since boot: 11 days 16 minutes
Graphics/Displays:
Apple M1:
Chipset Model: Apple M1
Type: GPU
Bus: Built-In
Total Number of Cores: 8
Vendor: Apple (0x106b)
Metal Family: Supported, Metal GPUFamily Apple 7
Displays:
Dell P2720D:
Resolution: 2560 x 1440 (QHD/WQHD - Wide Quad High Definition)
UI Looks like: 2560 x 1440 @ 60.00Hz
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: Yes
Dell P2720D:
Resolution: 2560 x 1440 (QHD/WQHD - Wide Quad High Definition)
UI Looks like: 2560 x 1440 @ 60.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: Yes
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.12.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
build: 0.10.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 3.1.0
ChimeraX-AddCharge: 1.5.9.1
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.9.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.43.10
ChimeraX-AtomicLibrary: 10.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.8
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6.1
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.12
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.9
ChimeraX-ModelPanel: 1.3.7
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.0
ChimeraX-NRRD: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10.1
ChimeraX-PDB: 2.7.2
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.3
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.28.4
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.1.3
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.33
debugpy: 1.6.7
decorator: 5.1.1
docutils: 0.19
executing: 1.2.0
filelock: 3.9.0
fonttools: 4.39.3
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.2.22
imagesize: 1.4.1
importlib-metadata: 6.6.0
ipykernel: 6.21.1
ipython: 8.10.0
ipython-genutils: 0.2.0
ipywidgets: 8.0.6
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.0.2
jupyter-core: 5.3.0
jupyterlab-widgets: 3.0.7
kiwisolver: 1.4.4
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.2
matplotlib: 3.6.3
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.2
networkx: 2.8.8
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 3.5.0
prompt-toolkit: 3.0.38
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.14.0
pynrrd: 1.0.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.4.2
PyQt6-Qt6: 6.4.3
PyQt6-sip: 13.4.1
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.3
python-dateutil: 2.8.2
pytz: 2023.3
pyzmq: 25.0.2
qtconsole: 5.4.0
QtPy: 2.3.1
RandomWords: 0.4.0
requests: 2.28.2
scipy: 1.9.3
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.4.1
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.1
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tcia-utils: 1.2.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.3.1
traitlets: 5.9.0
typing-extensions: 4.5.0
tzdata: 2023.3
urllib3: 1.26.15
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.7
zipp: 3.15.0
Change History (2)
comment:1 by , 21 months ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0 |
comment:2 by , 21 months ago
| Resolution: | → duplicate |
|---|---|
| Status: | accepted → closed |
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