Distance font size changes between coord sets

[Tristan Croll]

The following bug report has been submitted:
Platform:        Windows-10-10.0.22631
ChimeraX Version: 1.7.1 (2024-01-23 01:58:08 UTC)
Description
If I create distance markers between atoms in a coordset and change the size of the label text with "label #2 size 2", then advancing the coordset to a different frame reverts the text size to the default. The text size doesn't change if I simply move an endpoint atom with the right mouse "Move atoms" tool.

Log:
> isolde shorthand
    
    
    Initialising ISOLDE-specific command aliases:
    Alias	Equivalent full command
    -------------------------------------------------
    st	isolde step {arguments}
    aw	isolde add water {arguments}
    awsf	isolde add water {arguments} sim false
    al	isolde add ligand {arguments}
    aa	isolde add aa $1 sel {arguments}
    ht	isolde mod his sel {arguments}
    so	setattr sel atoms occupancy {arguments}
    ab	isolde adjust bfactors {arguments}
    ss	isolde sim start sel
    rt	isolde release torsions sel {arguments}
    rd	isolde release distances sel {arguments}
    ra	rd; rt
    pf	isolde pepflip sel
    cf	isolde cisflip sel
    cbb	color bfactor {arguments}
    cbo	color byattr occupancy {arguments}
    cbc	color {arguments} bychain; color {arguments} byhet
    cs	clipper set contourSensitivity {arguments}
    

  
UCSF ChimeraX version: 1.7.1 (2024-01-23)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open "C:\Users\Tristan
> Croll\Documents\Structures\trek-1_minispadin\minispadin_possible_dock_to_6w8c.pdb"
> format pdb

Chain information for minispadin_possible_dock_to_6w8c.pdb #1  
---  
Chain | Description  
A B | No description available  
C D | No description available  
  

> close #1

> open "C:/Users/Tristan
> Croll/Documents/Structures/trek-1_minispadin/movie/6w8c_to_4twk_morph.pdb"
> format pdb

Chain information for 6w8c_to_4twk_morph.pdb  
---  
Chain | Description  
1.1/A 1.1/B | No description available  
1.2/A 1.3/A 1.4/A 1.5/A 1.6/A 1.7/A 1.8/A 1.9/A 1.10/A 1.11/A 1.12/A 1.13/A
1.14/A 1.15/A 1.16/A 1.17/A 1.18/A 1.19/A 1.20/A 1.21/A 1.22/A 1.23/A 1.24/A
1.25/A 1.26/A 1.27/A 1.28/A 1.29/A 1.30/A 1.31/A 1.32/A 1.33/A 1.34/A 1.35/A
1.36/A 1.37/A 1.38/A 1.39/A 1.40/A 1.41/A 1.42/A 1.43/A 1.44/A 1.45/A 1.46/A
1.47/A 1.48/A 1.49/A 1.50/A 1.51/A 1.52/A 1.53/A 1.54/A 1.55/A 1.56/A 1.57/A
1.58/A 1.59/A 1.60/A 1.61/A 1.62/A 1.63/A 1.64/A 1.65/A 1.66/A 1.67/A 1.68/A
1.69/A 1.70/A 1.71/A 1.72/A 1.73/A 1.74/A 1.75/A 1.76/A 1.77/A 1.78/A 1.79/A
1.80/A 1.81/A 1.82/A 1.83/A 1.84/A 1.85/A 1.86/A 1.87/A 1.88/A 1.89/A 1.90/A
1.91/A 1.92/A 1.93/A 1.94/A 1.95/A 1.96/A 1.97/A 1.98/A 1.99/A 1.100/A 1.101/A
1.102/A 1.103/A 1.104/A 1.105/A 1.106/A 1.107/A 1.108/A 1.109/A 1.110/A
1.111/A 1.112/A 1.113/A 1.114/A 1.115/A 1.116/A 1.117/A 1.118/A 1.119/A
1.120/A 1.121/A | No description available  
1.2/B 1.3/B 1.4/B 1.5/B 1.6/B 1.7/B 1.8/B 1.9/B 1.10/B 1.11/B 1.12/B 1.13/B
1.14/B 1.15/B 1.16/B 1.17/B 1.18/B 1.19/B 1.20/B 1.21/B 1.22/B 1.23/B 1.24/B
1.25/B 1.26/B 1.27/B 1.28/B 1.29/B 1.30/B 1.31/B 1.32/B 1.33/B 1.34/B 1.35/B
1.36/B 1.37/B 1.38/B 1.39/B 1.40/B 1.41/B 1.42/B 1.43/B 1.44/B 1.45/B 1.46/B
1.47/B 1.48/B 1.49/B 1.50/B 1.51/B 1.52/B 1.53/B 1.54/B 1.55/B 1.56/B 1.57/B
1.58/B 1.59/B 1.60/B 1.61/B 1.62/B 1.63/B 1.64/B 1.65/B 1.66/B 1.67/B 1.68/B
1.69/B 1.70/B 1.71/B 1.72/B 1.73/B 1.74/B 1.75/B 1.76/B 1.77/B 1.78/B 1.79/B
1.80/B 1.81/B 1.82/B 1.83/B 1.84/B 1.85/B 1.86/B 1.87/B 1.88/B 1.89/B 1.90/B
1.91/B 1.92/B 1.93/B 1.94/B 1.95/B 1.96/B 1.97/B 1.98/B 1.99/B 1.100/B 1.101/B
1.102/B 1.103/B 1.104/B 1.105/B 1.106/B 1.107/B 1.108/B 1.109/B 1.110/B
1.111/B 1.112/B 1.113/B 1.114/B 1.115/B 1.116/B 1.117/B 1.118/B 1.119/B
1.120/B 1.121/B | No description available  
  

> close

> cd "C:/Users/Tristan Croll/Documents/Structures/trek-1_minispadin/movie"

Current working directory is: C:\Users\Tristan
Croll\Documents\Structures\trek-1_minispadin\movie  

> open "C:/Users/Tristan
> Croll/Documents/Structures/trek-1_minispadin/movie/6w8c_to_4twk_morph.pdb"
> format pdb coordsets true

Chain information for 6w8c_to_4twk_morph.pdb #1  
---  
Chain | Description  
A B | No description available  
  
6w8c_to_4twk_morph.pdb has 121 coordinate sets  

> rainbow

> select /B:316

5 atoms, 4 bonds, 1 residue, 1 model selected  

> select add /B:35

11 atoms, 9 bonds, 2 residues, 1 model selected  

> distance sel&@CA color black size 2

Expected a keyword  

> usage dist

distance objects [color a color] [dashes dashes] [radius a number]
[decimalPlaces decimalPlaces] [symbol true or false] [signed true or false]
[monitor true or false]  
— show/report distance  
dashes: an integer ≥ 0  
decimalPlaces: an integer ≥ 0

distance delete [pbonds]  
— remove distance monitors  
pbonds: a pseudobonds specifier or nothing

distance save saveFileName  
— save distance information  
saveFileName: name of a file to save/write; a name of 'browse' will bring up a
file browser

distance style [pbonds] [color a color] [dashes dashes] [radius a number]
[decimalPlaces decimalPlaces] [symbol true or false] [setDefaults true or
false]  
— set distance display properties  
pbonds: a pseudobonds specifier or nothing  
dashes: an integer ≥ 0  
decimalPlaces: an integer ≥ 0  

> distance sel&@CA color black

Distance between /B SER 35 CA and GLU 316 CA: 37.895Å  

> select clear

> select /B:316

5 atoms, 4 bonds, 1 residue, 1 model selected  

> select add /A:35

11 atoms, 9 bonds, 2 residues, 1 model selected  

> distance sel&@CA color black

Distance between /A SER 35 CA and /B GLU 316 CA: 63.293Å  

> usage label style

label [objects] [objectType] [text text] [offset offset] [color color]
[bgColor bgColor] [size size] [height height] [defaultHeight a number] [font a
text string] [attribute a text string] [onTop true or false]  
— Create atom labels  
objects: an objects specifier or nothing  
objectType: one of atoms, bonds, pseudobonds, or residues  
text: default or a text string  
offset: default or some numbers  
color: one of auto or default or a color  
bgColor: none or a color  
size: default or an integer  
height: fixed or a number

label delete [objects] [objectType]  
— Delete atom labels  
objects: an objects specifier or nothing  
objectType: one of atoms, bonds, pseudobonds, or residues

label listfonts  
— List available fonts

label orient [orient]  
— Set label orientation updating  
orient: a number  

> label size 2

> label size default

> label height 2

> select /B:316

5 atoms, 4 bonds, 1 residue, 1 model selected  

> select add /B:35

11 atoms, 9 bonds, 2 residues, 1 model selected  

> select add /A:35

17 atoms, 14 bonds, 3 residues, 1 model selected  

> select add /A:321

24 atoms, 20 bonds, 4 residues, 1 model selected  

> label sel

> label sel height 1

> select clear

> select /A:41

7 atoms, 6 bonds, 1 residue, 1 model selected  

> select up

261 atoms, 265 bonds, 33 residues, 1 model selected  

> select up

621 atoms, 629 bonds, 79 residues, 1 model selected  

> select up

659 atoms, 669 bonds, 83 residues, 1 model selected  

> select up

2159 atoms, 2212 bonds, 276 residues, 1 model selected  

> usage cartoon style

cartoon style [atoms] [width width] [thickness thickness] [arrows true or
false] [arrowsHelix true or false] [arrowScale arrowScale] [xsection xsection]
[sides sides] [divisions divisions] [barScale barScale] [barSides barSides]
[modeHelix modeHelix] [radius radius]  
— set cartoon style for secondary structures in specified models  
width: a number > 0  
thickness: a number > 0  
arrowScale: a number ≥ 1.0 and ≤ 5.0  
xsection: one of barbell, oval, piping, rectangle, round, or square  
sides: an even integer ≥ 3 and ≤ 24  
divisions: an integer ≥ 2 and ≤ 40  
barScale: a number > 0  
barSides: an even integer ≥ 3 and ≤ 24  
modeHelix: one of default, tube, or wrap  
radius: a number > 0 or auto  

> usage tube

"tube" is not a command name  

> cartoon style sel modeHelix tube

> cartoon style sel modeHelix wrap

> show sel&@CA

> ~cartoon sel

> select clear

> lighting soft

> label #2 height 2

> select /A:35@CA

1 atom, 1 residue, 1 model selected  

> select add /A:321@CA

2 atoms, 2 residues, 1 model selected  

> distance sel&@CA

Distance between /A SER 35 CA and VAL 321 CA: 32.229Å  

> label #2 height 2

> ~distance sel

> select /A:35,316@CA

2 atoms, 2 residues, 1 model selected  

> distance sel

Distance between /A SER 35 CA and GLU 316 CA: 34.210Å  

> label #2 height 2

[Repeated 1 time(s)]

> select clear

> select /A:316@CA

1 atom, 1 residue, 1 model selected  

> label sel

> select clear

> usage dist style

distance style [pbonds] [color a color] [dashes dashes] [radius a number]
[decimalPlaces decimalPlaces] [symbol true or false] [setDefaults true or
false]  
— set distance display properties  
pbonds: a pseudobonds specifier or nothing  
dashes: an integer ≥ 0  
decimalPlaces: an integer ≥ 0  

> distance style #2 decimalPlaces 1

> distance style decimalPlaces 1

> select /A:316@CA

1 atom, 1 residue, 1 model selected  

> select add /B:35

7 atoms, 5 bonds, 2 residues, 1 model selected  

> select sel&@CA

2 atoms, 2 residues, 1 model selected  

> distance sel

Distance between /A GLU 316 CA and /B SER 35 CA: 59.6Å  

> label #2 height 2

> select clear

> label #1 height 1

> undo

[Repeated 3 time(s)]

> select clear

> ~label #1

> select /B:316

5 atoms, 4 bonds, 1 residue, 1 model selected  

> select clear

> select /A:316@CA

1 atom, 1 residue, 1 model selected  

> select add /B:316

6 atoms, 4 bonds, 2 residues, 1 model selected  

> select add /A:321@CA

7 atoms, 4 bonds, 3 residues, 1 model selected  

> select add /A:35@CA

8 atoms, 4 bonds, 4 residues, 1 model selected  

> select add /B:35

14 atoms, 9 bonds, 5 residues, 1 model selected  

> label sel height 1

> label #2

> label #2 height 2

> select clear

> label #2 height 2

[Repeated 2 time(s)]




OpenGL version: 3.3.0 NVIDIA 529.19
OpenGL renderer: NVIDIA GeForce RTX 3070 Laptop GPU/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Python: 3.11.2
Locale: en_GB.cp1252
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: windows

Manufacturer: HP
Model: HP ZBook Studio 15.6 inch G8 Mobile Workstation PC
OS: Microsoft Windows 11 Pro (Build 22631)
Memory: 34,007,068,672
MaxProcessMemory: 137,438,953,344
CPU: 16 11th Gen Intel(R) Core(TM) i7-11800H @ 2.30GHz
OSLanguage: en-GB

Installed Packages:
    -himerax-clipper: 0.22.2
    alabaster: 0.7.16
    appdirs: 1.4.4
    asttokens: 2.4.1
    Babel: 2.14.0
    backcall: 0.2.0
    beautifulsoup4: 4.11.2
    blockdiag: 3.0.0
    blosc2: 2.0.0
    build: 0.10.0
    certifi: 2023.11.17
    cftime: 1.6.3
    charset-normalizer: 3.3.2
    ChimeraX-AddCharge: 1.5.13
    ChimeraX-AddH: 2.2.5
    ChimeraX-AlignmentAlgorithms: 2.0.1
    ChimeraX-AlignmentHdrs: 3.4.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.12.2
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.1.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.49.1
    ChimeraX-AtomicLibrary: 12.1.5
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3.2
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.10.5
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.2
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.2
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.3.2
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-Clipper: 0.22.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.5
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.7.1
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2
    ChimeraX-DistMonitor: 1.4
    ChimeraX-DockPrep: 1.1.3
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ISOLDE: 1.7.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-Label: 1.1.8
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.1.6
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.1.4
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.1.2
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.6.1
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.12.1
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.14
    ChimeraX-ModelPanel: 1.4
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.1
    ChimeraX-NRRD: 1.1
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.13.1
    ChimeraX-PDB: 2.7.3
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-QScore: 1.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.2
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.2
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.11
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.2
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.12.4
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.2
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.33.3
    ChimeraX-uniprot: 2.3
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.3.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.3
    ChimeraX-XMAS: 1.1.2
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.1
    comtypes: 1.1.14
    contourpy: 1.2.0
    cxservices: 1.2.2
    cycler: 0.12.1
    Cython: 0.29.33
    debugpy: 1.8.0
    decorator: 5.1.1
    docutils: 0.19
    et-xmlfile: 1.1.0
    executing: 2.0.1
    filelock: 3.9.0
    fonttools: 4.47.2
    funcparserlib: 2.0.0a0
    glfw: 2.6.4
    grako: 3.16.5
    h5py: 3.10.0
    html2text: 2020.1.16
    idna: 3.6
    ihm: 0.38
    imagecodecs: 2023.9.18
    imagesize: 1.4.1
    ipykernel: 6.23.2
    ipython: 8.14.0
    ipython-genutils: 0.2.0
    ipywidgets: 8.1.1
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 8.2.0
    jupyter-core: 5.7.1
    jupyterlab-widgets: 3.0.9
    kiwisolver: 1.4.5
    line-profiler: 4.0.2
    lxml: 4.9.2
    lz4: 4.3.2
    MarkupSafe: 2.1.4
    matplotlib: 3.7.2
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.6.0
    netCDF4: 1.6.2
    networkx: 3.1
    nibabel: 5.0.1
    nptyping: 2.5.0
    numexpr: 2.8.8
    numpy: 1.25.1
    openpyxl: 3.1.2
    openvr: 1.23.701
    packaging: 23.2
    pandas: 2.0.3
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pickleshare: 0.7.5
    pillow: 10.2.0
    pip: 23.0
    pkginfo: 1.9.6
    platformdirs: 4.1.0
    pprintpp: 0.4.0
    prompt-toolkit: 3.0.43
    psutil: 5.9.5
    pure-eval: 0.2.2
    py-cpuinfo: 9.0.0
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.16.1
    pynmrstar: 3.3.2
    pynrrd: 1.0.0
    PyOpenGL: 3.1.7
    PyOpenGL-accelerate: 3.1.7
    pyopenxr: 1.0.2801
    pyparsing: 3.0.9
    pyproject-hooks: 1.0.0
    PyQt6-commercial: 6.3.1
    PyQt6-Qt6: 6.3.2
    PyQt6-sip: 13.4.0
    PyQt6-WebEngine-commercial: 6.3.1
    PyQt6-WebEngine-Qt6: 6.3.2
    python-dateutil: 2.8.2
    pytz: 2023.3.post1
    pywin32: 305
    pyzmq: 25.1.2
    qtconsole: 5.4.3
    QtPy: 2.4.1
    QtRangeSlider: 0.1.5
    RandomWords: 0.4.0
    requests: 2.31.0
    scipy: 1.11.1
    seaborn: 0.12.2
    Send2Trash: 1.8.2
    SEQCROW: 1.7.3
    setuptools: 67.4.0
    sfftk-rw: 0.7.3
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.5
    sphinx: 6.1.3
    sphinx-autodoc-typehints: 1.22
    sphinxcontrib-applehelp: 1.0.8
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.6
    sphinxcontrib-htmlhelp: 2.0.5
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.7
    sphinxcontrib-serializinghtml: 1.1.10
    stack-data: 0.6.3
    superqt: 0.5.0
    tables: 3.8.0
    tcia-utils: 1.5.1
    tifffile: 2023.7.18
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.4
    traitlets: 5.9.0
    typing-extensions: 4.9.0
    tzdata: 2023.4
    urllib3: 2.1.0
    wcwidth: 0.2.13
    webcolors: 1.12
    wheel: 0.38.4
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.9
    WMI: 1.5.1

[Eric Pettersen]

Fix: ​https://github.com/RBVI/ChimeraX/commit/cf2b4604eb745c8858eeae37fc4f7a8c484cd8dd