Opened 7 years ago
Closed 7 years ago
#1362 closed defect (fixed)
Not all bugs offering "Report Bug" option
Reported by: | Owned by: | Eric Pettersen | |
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Priority: | normal | Milestone: | |
Component: | Logging | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Windows-10-10.0.17134 ChimeraX Version: 0.8 (2018-10-12) Description I don't get a "Report Bug" button on the error dialog when this TypeError occurs. I am fixing the problem reported by the traceback, but Eric should fix the Report Bug button so it appears. Log: UCSF ChimeraX version: 0.8 (2018-10-12) How to cite UCSF ChimeraX open 2adw ↵ Summary of feedback from opening 2adw fetched from pdb --- warnings | Ignoring microheterogeneity for label_seq_id 3 in chain H Ignoring microheterogeneity for label_seq_id 7 in chain H Ignoring microheterogeneity for label_seq_id 3 in chain I Ignoring microheterogeneity for label_seq_id 7 in chain I Ignoring microheterogeneity for label_seq_id 3 in chain J 1 messages similar to the above omitted notes | Fetching compressed mmCIF 2adw from http://files.rcsb.org/download/2adw.cif Fetching CCD DA from http://ligand-expo.rcsb.org/reports/D/DA/DA.cif Fetching CCD DC from http://ligand-expo.rcsb.org/reports/D/DC/DC.cif Fetching CCD DG from http://ligand-expo.rcsb.org/reports/D/DG/DG.cif Fetching CCD DT from http://ligand-expo.rcsb.org/reports/D/DT/DT.cif Fetching CCD DSN from http://ligand-expo.rcsb.org/reports/D/DSN/DSN.cif Fetching CCD N2C from http://ligand-expo.rcsb.org/reports/N/N2C/N2C.cif Fetching CCD NCY from http://ligand-expo.rcsb.org/reports/N/NCY/NCY.cif Fetching CCD MVA from http://ligand-expo.rcsb.org/reports/M/MVA/MVA.cif Fetching CCD MES from http://ligand-expo.rcsb.org/reports/M/MES/MES.cif Fetching CCD NI from http://ligand-expo.rcsb.org/reports/N/NI/NI.cif Fetching CCD QUI from http://ligand-expo.rcsb.org/reports/Q/QUI/QUI.cif 2adw title: Crystal strucutre of Echinomycin-(ACGTACGT)2 solved by SAD [more info...] Chain information for 2adw #1 --- Chain | Description A C E G | 5'-D(*ap*CP*GP*TP*ap*CP*GP*T)-3' H I J K | echinomycin 2adw mmCIF Assemblies | 1| software_defined_assembly | 2| software_defined_assembly show selAtoms ribbons ↵ An error occurred in drawing the scene. Redrawing graphics is now stopped to avoid a continuous stream of error messages. To restart graphics use the command "graphics restart" after changing the settings that caused the error. Traceback (most recent call last): File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\updateloop.py", line 72, in draw_new_frame view.draw(check_for_changes = False) File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\graphics\view.py", line 157, in draw self._draw_scene(camera, drawings) File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\graphics\view.py", line 186, in _draw_scene shadow, multishadow = self._compute_shadowmaps(opaque_drawings + transparent_drawings, camera) File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\graphics\view.py", line 511, in _compute_shadowmaps shadow_enabled = r.shadow.use_shadow_map(camera, drawings, self._shadow_bounds) File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\graphics\opengl.py", line 1165, in use_shadow_map center, radius, sdrawings = shadow_bounds(drawings) File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\graphics\view.py", line 522, in _shadow_bounds b = bounds.union_bounds(d.bounds() for d in sdrawings) File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\geometry\bounds.py", line 90, in union_bounds for b in blist: File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\graphics\view.py", line 522, in <genexpr> b = bounds.union_bounds(d.bounds() for d in sdrawings) File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\graphics\drawing.py", line 867, in bounds spos = self.get_scene_positions(displayed_only=True) File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\graphics\drawing.py", line 445, in get_scene_positions p = d.get_positions(displayed_only) * p File "C:\cygwin64\home\goddard\chimerax\ChimeraX.app\bin\lib\site- packages\chimerax\core\geometry\place.py", line 536, in __mul__ places.array(), len(places)) TypeError: Require array value type double, got float toolshed show "Bug Reporter" OpenGL version: 3.3.0 NVIDIA 398.35 OpenGL renderer: GeForce GTX 1070 with Max-Q Design/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation
Change History (2)
comment:1 by , 7 years ago
Component: | Unassigned → Logging |
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Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → accepted |
Summary: | ChimeraX bug report submission → Not all bugs offering "Report Bug" option |
comment:2 by , 7 years ago
Resolution: | → fixed |
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Status: | accepted → closed |
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Some calls to logger.error() need to change to logger.bug()