Opened 7 years ago

Closed 7 years ago

#1236 closed defect (duplicate)

'camera_position' is None

Reported by: chimerax-bug-report@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: VR Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        Windows-10-10.0.17134
ChimeraX Version: 0.7 (2018-08-01)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 0.7 (2018-08-01)  
OpenGL version: 3.3.0 NVIDIA 398.11  
OpenGL renderer: GeForce GTX 1080/PCIe/SSE2  
OpenGL vendor: NVIDIA Corporation  
How to cite UCSF ChimeraX  

open 3jao

Summary of feedback from opening 3jao fetched from pdb  
---  
notes | Used PDBx fixed column width tables to speed up reading mmCIF file  
Used PDBx keywords to speed up reading mmCIF file  
  
Chain information for 3jao #1  
---  
Chain | Description  
A | Tubulin α 1A chain  
B | Tubulin β chain  
  
3jao mmCIF Assemblies | 1| representative helical assembly | 2| helical
asymmetric unit | 3| helical asymmetric unit, std helical frame  

3jao citation:    Maheshwari, A., Obbineni, J.M., Bui, K.H., Shibata, K.,
Toyoshima, Y.Y., Ishikawa, T. (2015). alpha- and beta-Tubulin Lattice of the
Axonemal Microtubule Doublet and Binding Proteins Revealed by Single Particle
Cryo-Electron Microscopy and Tomography. Structure, 23, 1584-1595. PMID:
26211611. DOI: 10.1016/j.str.2015.06.017  
Opened mmCIF data containing 6774 atoms and 6920 bonds  

sym #1 assembly 1

view

hide selAtoms

vr on

device vr true

started SteamVR rendering  

rainbow chains

meeting start

Meeting at DESKTOP-HOIJNCV or 169.230.21.70 port 52194  
Connection accepted from 169.230.21.238 port 50497  
Connection accepted from 169.230.21.238 port 50499  

close session

open "C:/Users/Jacobson Lab/Desktop/1or8.pdb"

Opened PDB data containing 5438 atoms and 5204 bonds  
| Chain information for 1or8.pdb #3.2  
---  
Chain | Description  
3.1/A | No description available  
3.2/A | No description available  
  
Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  

Traceback (most recent call last):  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 380, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 320, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 746, in mouse_drag  
    self.translate((dx, -dy, 0))  
  File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
    step = self.camera_position.apply_without_translation(s) # Scene coord
system  
AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  

AttributeError: 'NoneType' object has no attribute 'apply_without_translation'  
  
File "C:\Program Files\ChimeraX-Aug-3-2018\bin\lib\site-
packages\chimerax\ui\mousemodes.py", line 756, in translate  
step = self.camera_position.apply_without_translation(s) # Scene coord system  
  
See log for complete Python traceback.  
  
If you wish to report this error, send mail to chimerax-bugs@cgl.ucsf.edu and
describe what you were doing and include a copy of the contents of the log.
Don't include any data you wish to remain private since a publicly viewable
bug report will be created.  




OpenGL version: 3.3.0 NVIDIA 398.11
OpenGL renderer: GeForce GTX 1080/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Change History (2)

comment:1 by Eric Pettersen, 7 years ago

Component: UnassignedVR
Owner: set to Tom Goddard
Platform: all
Project: ChimeraX
Status: newassigned
Summary: ChimeraX bug report submission'camera_position' is None

comment:2 by Eric Pettersen, 7 years ago

Resolution: duplicate
Status: assignedclosed

dup of #1235

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