Opened 7 years ago

Closed 7 years ago

#1181 closed defect (fixed)

ChimeraX on CentOS 7

Reported by: jameskizziah@… Owned by: Greg Couch
Priority: normal Milestone: 0.7
Component: Platform Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

Hello,

While attempting to establish ChimeraX (using the most recent daily build)
on our CentOS 7 workstation, I have already downloaded and located the
necessary libraries as described in the Linux download notes.

Though this resolved the relevant error referenced in the notes, I am now
receiving the following error:

_________________________________________________________________
NOTE: Traceback (most recent call last):
  File "/usr/local/chimerax/lib/python3.6/runpy.py", line 193, in
_run_module_as_main
    "__main__", mod_spec)
  File "/usr/local/chimerax/lib/python3.6/runpy.py", line 85, in _run_code
    exec(code, run_globals)
  File "/usr/local/chimerax/lib/python3.6/site-packages/ChimeraX_main.py",
line 783, in <module>
    exit_code = init(sys.argv)
  File "/usr/local/chimerax/lib/python3.6/site-packages/ChimeraX_main.py",
line 551, in init
    _xdg.install_if_needed(sess, localized_app_name)
AttributeError: module 'chimerax.core._xdg' has no attribute
'install_if_needed'


ERROR: AttributeError: module 'chimerax.core._xdg' has no attribute
'install_if_needed'

File "/usr/local/chimerax/lib/python3.6/site-packages/ChimeraX_main.py",
line
551, in init
_xdg.install_if_needed(sess, localized_app_name)

 _See log for complete Python traceback._

If you wish to report this error, send mail to [chimerax-
bugs@cgl.ucsf.edu](mailto:chimerax-bugs@cgl.ucsf.edu) and describe what you
were doing and include a copy of the contents of the log. Don't include any
data you wish to remain private since a publicly viewable bug report will be
created.
__________________________________________________________________

​I was unable to locate any mention of this error, so I was hoping that you
might be able to offer some assistance.

Thank you for your time,
James



*__________________________________________________________*
*James L. Kizziah*
Graduate Biomedical Sciences Student | Terje Dokland Lab |
Biochemistry, Stem Cell, and Structural Biology |
Department of Microbiology  | University of Alabama at Birmingham |
​Linkedin: www.linkedin.com/in/jameskizziah

Change History (3)

comment:1 by pett, 7 years ago

Component: UnassignedPlatform
Milestone: 0.7
Owner: set to Greg Couch
Platform: all
Project: ChimeraX
Status: newassigned

comment:2 by Tristan Croll, 7 years ago

I was just coming to report the same issue! Seems to be a Linux-wide thing. For what it's worth, commenting out line 551 of ChimeraX_main.py seems to get things running with no obvious problems.

comment:3 by Greg Couch, 7 years ago

Resolution: fixed
Status: assignedclosed

This bug has been fixed in the current daily build.

Note: See TracTickets for help on using tickets.