![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 2 years ago
Closed 2 years ago
#10189 closed defect (nonchimerax)
Graphics crash, macOS 14.1.1, Intel Iris Plus Graphics
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Graphics | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description (last modified by )
The following bug report has been submitted:
Platform: macOS-14.1.1-x86_64-i386-64bit
ChimeraX Version: 1.7rc202311180239 (2023-11-18 02:39:13 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Aborted
Current thread 0x00007ff851e30b40 (most recent call first):
File "/Applications/ChimeraX-1.7-rc2023.11.18.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/opengl.py", line 248 in swap_buffers
File "/Applications/ChimeraX-1.7-rc2023.11.18.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/opengl.py", line 556 in swap_buffers
File "/Applications/ChimeraX-1.7-rc2023.11.18.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/view.py", line 202 in draw
File "/Applications/ChimeraX-1.7-rc2023.11.18.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/updateloop.py", line 84 in draw_new_frame
File "/Applications/ChimeraX-1.7-rc2023.11.18.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/updateloop.py", line 150 in _redraw_timer_callback
File "/Applications/ChimeraX-1.7-rc2023.11.18.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX-1.7-rc2023.11.18.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 918 in init
File "/Applications/ChimeraX-1.7-rc2023.11.18.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1069 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtWebChannel, PyQt6.QtNetwork, PyQt6.QtWebEngineCore, PyQt6.QtPrintSupport, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.surface._surface, chimerax.map._map, charset_normalizer.md, PIL._imaging, matplotlib._c_internal_utils, matplotlib._path, kiwisolver._cext, matplotlib._image, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.pdb_lib._load_libs, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, chimerax.pdb._pdbio, chimerax.atomic._ribbons, chimerax.graphics._graphics, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif (total: 52)
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{
"uptime" : 690,
"procRole" : "Background",
"version" : 2,
"userID" : 502,
"deployVersion" : 210,
"modelCode" : "MacBookAir9,1",
"coalitionID" : 832,
"osVersion" : {
"train" : "macOS 14.1.1",
"build" : "23B81",
"releaseType" : "User"
},
"captureTime" : "2023-11-19 15:20:08.8884 +0530",
"codeSigningMonitor" : 0,
"incident" : "F4E774D2-E9AC-49AA-95A7-2339F6ED0C8E",
"pid" : 869,
"cpuType" : "X86-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2023-11-19 15:14:44.7707 +0530",
"procStartAbsTime" : 369354875270,
"procExitAbsTime" : 693406457670,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.7-rc2023.11.18.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.7.0","CFBundleVersion":"1.7.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"BBC41E3F-6851-5AC2-8C15-282074E4C9F9","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "08DB7563-3943-99B1-BC25-714D569A5A77",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 4294967295,
"bridgeVersion" : {"build":"21P1069","train":"8.1"},
"sip" : "enabled",
"exception" : {"codes":"0x0000000000000000, 0x0000000000000000","rawCodes":[0,0],"type":"EXC_CRASH","signal":"SIGABRT"},
"termination" : {"flags":0,"code":6,"namespace":"SIGNAL","indicator":"Abort trap: 6","byProc":"ChimeraX","byPid":869},
"ktriageinfo" : "VM - (arg = 0x3) mach_vm_allocate_kernel failed within call to vm_map_enter\nVM - (arg = 0x3) mach_vm_allocate_kernel failed within call to vm_map_enter\n",
"asi" : {"libsystem_c.dylib":["abort() called"]},
"asiSignatures" : ["Graphics hardware encountered an error and was reset: 0x00000002\n"],
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"faultingThread" : 0,
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[deleted to fit within ticket limits]
Ignored bad PDB record found on line 9850
REMARK IntraFull: 40.3112
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 9901
REMARK Energy: 27.9892
Ignored bad PDB record found on line 9902
REMARK SimpleFitness: 27.9892
Ignored bad PDB record found on line 9903
REMARK FullFitness: -597.954
Ignored bad PDB record found on line 9904
REMARK InterFull: -29.0762
Ignored bad PDB record found on line 9905
REMARK IntraFull: 40.3112
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 9956
REMARK Energy: 27.9892
Ignored bad PDB record found on line 9957
REMARK SimpleFitness: 27.9892
Ignored bad PDB record found on line 9958
REMARK FullFitness: -597.954
Ignored bad PDB record found on line 9959
REMARK InterFull: -29.0762
Ignored bad PDB record found on line 9960
REMARK IntraFull: 40.3112
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10011
REMARK Energy: 27.8776
Ignored bad PDB record found on line 10012
REMARK SimpleFitness: 27.8776
Ignored bad PDB record found on line 10013
REMARK FullFitness: -597.9048
Ignored bad PDB record found on line 10014
REMARK InterFull: -29.3257
Ignored bad PDB record found on line 10015
REMARK IntraFull: 40.5019
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10066
REMARK Energy: 27.8776
Ignored bad PDB record found on line 10067
REMARK SimpleFitness: 27.8776
Ignored bad PDB record found on line 10068
REMARK FullFitness: -597.9048
Ignored bad PDB record found on line 10069
REMARK InterFull: -29.3257
Ignored bad PDB record found on line 10070
REMARK IntraFull: 40.5019
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10121
REMARK Energy: 27.8785
Ignored bad PDB record found on line 10122
REMARK SimpleFitness: 27.8785
Ignored bad PDB record found on line 10123
REMARK FullFitness: -597.8643
Ignored bad PDB record found on line 10124
REMARK InterFull: -29.4408
Ignored bad PDB record found on line 10125
REMARK IntraFull: 40.6035
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10176
REMARK Energy: 27.8785
Ignored bad PDB record found on line 10177
REMARK SimpleFitness: 27.8785
Ignored bad PDB record found on line 10178
REMARK FullFitness: -597.8643
Ignored bad PDB record found on line 10179
REMARK InterFull: -29.4408
Ignored bad PDB record found on line 10180
REMARK IntraFull: 40.6035
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10231
REMARK Energy: 27.8785
Ignored bad PDB record found on line 10232
REMARK SimpleFitness: 27.8785
Ignored bad PDB record found on line 10233
REMARK FullFitness: -597.8643
Ignored bad PDB record found on line 10234
REMARK InterFull: -29.4408
Ignored bad PDB record found on line 10235
REMARK IntraFull: 40.6035
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10286
REMARK Energy: 28.3707
Ignored bad PDB record found on line 10287
REMARK SimpleFitness: 28.3707
Ignored bad PDB record found on line 10288
REMARK FullFitness: -597.93353
Ignored bad PDB record found on line 10289
REMARK InterFull: -22.722
Ignored bad PDB record found on line 10290
REMARK IntraFull: 42.0845
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10341
REMARK Energy: 30.9625
Ignored bad PDB record found on line 10342
REMARK SimpleFitness: 30.9625
Ignored bad PDB record found on line 10343
REMARK FullFitness: -596.41595
Ignored bad PDB record found on line 10344
REMARK InterFull: -24.5083
Ignored bad PDB record found on line 10345
REMARK IntraFull: 44.5463
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10396
REMARK Energy: 32.1763
Ignored bad PDB record found on line 10397
REMARK SimpleFitness: 32.1763
Ignored bad PDB record found on line 10398
REMARK FullFitness: -595.1944
Ignored bad PDB record found on line 10399
REMARK InterFull: -21.7295
Ignored bad PDB record found on line 10400
REMARK IntraFull: 43.5541
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10451
REMARK Energy: 31.3518
Ignored bad PDB record found on line 10452
REMARK SimpleFitness: 31.3518
Ignored bad PDB record found on line 10453
REMARK FullFitness: -597.9303
Ignored bad PDB record found on line 10454
REMARK InterFull: -23.4943
Ignored bad PDB record found on line 10455
REMARK IntraFull: 37.902
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10506
REMARK Energy: 29.7223
Ignored bad PDB record found on line 10507
REMARK SimpleFitness: 29.7223
Ignored bad PDB record found on line 10508
REMARK FullFitness: -597.79474
Ignored bad PDB record found on line 10509
REMARK InterFull: -24.5619
Ignored bad PDB record found on line 10510
REMARK IntraFull: 37.0782
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10561
REMARK Energy: 29.0629
Ignored bad PDB record found on line 10562
REMARK SimpleFitness: 29.0629
Ignored bad PDB record found on line 10563
REMARK FullFitness: -597.1401
Ignored bad PDB record found on line 10564
REMARK InterFull: -25.6973
Ignored bad PDB record found on line 10565
REMARK IntraFull: 37.0102
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10616
REMARK Energy: 30.394
Ignored bad PDB record found on line 10617
REMARK SimpleFitness: 30.394
Ignored bad PDB record found on line 10618
REMARK FullFitness: -597.133
Ignored bad PDB record found on line 10619
REMARK InterFull: -24.093
Ignored bad PDB record found on line 10620
REMARK IntraFull: 37.689
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10671
REMARK Energy: 31.244
Ignored bad PDB record found on line 10672
REMARK SimpleFitness: 31.244
Ignored bad PDB record found on line 10673
REMARK FullFitness: -596.27045
Ignored bad PDB record found on line 10674
REMARK InterFull: -25.3511
Ignored bad PDB record found on line 10675
REMARK IntraFull: 38.2377
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10726
REMARK Energy: 30.602
Ignored bad PDB record found on line 10727
REMARK SimpleFitness: 30.602
Ignored bad PDB record found on line 10728
REMARK FullFitness: -594.42456
Ignored bad PDB record found on line 10729
REMARK InterFull: -29.2288
Ignored bad PDB record found on line 10730
REMARK IntraFull: 40.4843
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10781
REMARK Energy: 32.1879
Ignored bad PDB record found on line 10782
REMARK SimpleFitness: 32.1879
Ignored bad PDB record found on line 10783
REMARK FullFitness: -594.1516
Ignored bad PDB record found on line 10784
REMARK InterFull: -26.4671
Ignored bad PDB record found on line 10785
REMARK IntraFull: 42.6105
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10836
REMARK Energy: 32.3197
Ignored bad PDB record found on line 10837
REMARK SimpleFitness: 32.3197
Ignored bad PDB record found on line 10838
REMARK FullFitness: -594.10846
Ignored bad PDB record found on line 10839
REMARK InterFull: -26.2939
Ignored bad PDB record found on line 10840
REMARK IntraFull: 42.6834
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10891
REMARK Energy: 32.4577
Ignored bad PDB record found on line 10892
REMARK SimpleFitness: 32.4577
Ignored bad PDB record found on line 10893
REMARK FullFitness: -594.04834
Ignored bad PDB record found on line 10894
REMARK InterFull: -26.1167
Ignored bad PDB record found on line 10895
REMARK IntraFull: 42.7884
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 10946
REMARK Energy: 33.0073
Ignored bad PDB record found on line 10947
REMARK SimpleFitness: 33.0073
Ignored bad PDB record found on line 10948
REMARK FullFitness: -592.18384
Ignored bad PDB record found on line 10949
REMARK InterFull: -21.3421
Ignored bad PDB record found on line 10950
REMARK IntraFull: 41.4153
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11001
REMARK Energy: 30.1272
Ignored bad PDB record found on line 11002
REMARK SimpleFitness: 30.1272
Ignored bad PDB record found on line 11003
REMARK FullFitness: -597.5613
Ignored bad PDB record found on line 11004
REMARK InterFull: -27.1364
Ignored bad PDB record found on line 11005
REMARK IntraFull: 39.7212
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11056
REMARK Energy: 30.0803
Ignored bad PDB record found on line 11057
REMARK SimpleFitness: 30.0803
Ignored bad PDB record found on line 11058
REMARK FullFitness: -597.1969
Ignored bad PDB record found on line 11059
REMARK InterFull: -28.269
Ignored bad PDB record found on line 11060
REMARK IntraFull: 40.7311
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11111
REMARK Energy: 30.0803
Ignored bad PDB record found on line 11112
REMARK SimpleFitness: 30.0803
Ignored bad PDB record found on line 11113
REMARK FullFitness: -597.1969
Ignored bad PDB record found on line 11114
REMARK InterFull: -28.269
Ignored bad PDB record found on line 11115
REMARK IntraFull: 40.7311
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11166
REMARK Energy: 30.1254
Ignored bad PDB record found on line 11167
REMARK SimpleFitness: 30.1254
Ignored bad PDB record found on line 11168
REMARK FullFitness: -597.06824
Ignored bad PDB record found on line 11169
REMARK InterFull: -28.3972
Ignored bad PDB record found on line 11170
REMARK IntraFull: 40.899
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11221
REMARK Energy: 30.1254
Ignored bad PDB record found on line 11222
REMARK SimpleFitness: 30.1254
Ignored bad PDB record found on line 11223
REMARK FullFitness: -597.06824
Ignored bad PDB record found on line 11224
REMARK InterFull: -28.3972
Ignored bad PDB record found on line 11225
REMARK IntraFull: 40.899
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11276
REMARK Energy: 27.7419
Ignored bad PDB record found on line 11277
REMARK SimpleFitness: 27.7419
Ignored bad PDB record found on line 11278
REMARK FullFitness: -596.963
Ignored bad PDB record found on line 11279
REMARK InterFull: -26.1122
Ignored bad PDB record found on line 11280
REMARK IntraFull: 37.1632
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11331
REMARK Energy: 27.7499
Ignored bad PDB record found on line 11332
REMARK SimpleFitness: 27.7499
Ignored bad PDB record found on line 11333
REMARK FullFitness: -596.9572
Ignored bad PDB record found on line 11334
REMARK InterFull: -26.0525
Ignored bad PDB record found on line 11335
REMARK IntraFull: 37.1473
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11386
REMARK Energy: 27.8439
Ignored bad PDB record found on line 11387
REMARK SimpleFitness: 27.8439
Ignored bad PDB record found on line 11388
REMARK FullFitness: -596.7462
Ignored bad PDB record found on line 11389
REMARK InterFull: -25.673
Ignored bad PDB record found on line 11390
REMARK IntraFull: 37.1688
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11441
REMARK Energy: 29.6982
Ignored bad PDB record found on line 11442
REMARK SimpleFitness: 29.6982
Ignored bad PDB record found on line 11443
REMARK FullFitness: -597.448
Ignored bad PDB record found on line 11444
REMARK InterFull: -24.0286
Ignored bad PDB record found on line 11445
REMARK IntraFull: 40.5646
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11496
REMARK Energy: 29.6982
Ignored bad PDB record found on line 11497
REMARK SimpleFitness: 29.6982
Ignored bad PDB record found on line 11498
REMARK FullFitness: -597.448
Ignored bad PDB record found on line 11499
REMARK InterFull: -24.0286
Ignored bad PDB record found on line 11500
REMARK IntraFull: 40.5646
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11551
REMARK Energy: 29.7354
Ignored bad PDB record found on line 11552
REMARK SimpleFitness: 29.7354
Ignored bad PDB record found on line 11553
REMARK FullFitness: -597.4293
Ignored bad PDB record found on line 11554
REMARK InterFull: -24.0028
Ignored bad PDB record found on line 11555
REMARK IntraFull: 40.5935
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11606
REMARK Energy: 29.7354
Ignored bad PDB record found on line 11607
REMARK SimpleFitness: 29.7354
Ignored bad PDB record found on line 11608
REMARK FullFitness: -597.4293
Ignored bad PDB record found on line 11609
REMARK InterFull: -24.0028
Ignored bad PDB record found on line 11610
REMARK IntraFull: 40.5935
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11661
REMARK Energy: 29.7354
Ignored bad PDB record found on line 11662
REMARK SimpleFitness: 29.7354
Ignored bad PDB record found on line 11663
REMARK FullFitness: -597.4293
Ignored bad PDB record found on line 11664
REMARK InterFull: -24.0028
Ignored bad PDB record found on line 11665
REMARK IntraFull: 40.5935
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11716
REMARK Energy: 29.7354
Ignored bad PDB record found on line 11717
REMARK SimpleFitness: 29.7354
Ignored bad PDB record found on line 11718
REMARK FullFitness: -597.4293
Ignored bad PDB record found on line 11719
REMARK InterFull: -24.0028
Ignored bad PDB record found on line 11720
REMARK IntraFull: 40.5935
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11771
REMARK Energy: 29.7354
Ignored bad PDB record found on line 11772
REMARK SimpleFitness: 29.7354
Ignored bad PDB record found on line 11773
REMARK FullFitness: -597.4293
Ignored bad PDB record found on line 11774
REMARK InterFull: -24.0028
Ignored bad PDB record found on line 11775
REMARK IntraFull: 40.5935
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11826
REMARK Energy: 29.9531
Ignored bad PDB record found on line 11827
REMARK SimpleFitness: 29.9531
Ignored bad PDB record found on line 11828
REMARK FullFitness: -597.27264
Ignored bad PDB record found on line 11829
REMARK InterFull: -24.0397
Ignored bad PDB record found on line 11830
REMARK IntraFull: 40.8231
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11881
REMARK Energy: 29.9592
Ignored bad PDB record found on line 11882
REMARK SimpleFitness: 29.9592
Ignored bad PDB record found on line 11883
REMARK FullFitness: -597.4025
Ignored bad PDB record found on line 11884
REMARK InterFull: -22.481
Ignored bad PDB record found on line 11885
REMARK IntraFull: 41.2215
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11936
REMARK Energy: 30.067
Ignored bad PDB record found on line 11937
REMARK SimpleFitness: 30.067
Ignored bad PDB record found on line 11938
REMARK FullFitness: -597.2502
Ignored bad PDB record found on line 11939
REMARK InterFull: -22.4691
Ignored bad PDB record found on line 11940
REMARK IntraFull: 41.3149
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 11991
REMARK Energy: 30.7169
Ignored bad PDB record found on line 11992
REMARK SimpleFitness: 30.7169
Ignored bad PDB record found on line 11993
REMARK FullFitness: -596.2922
Ignored bad PDB record found on line 11994
REMARK InterFull: -21.2625
Ignored bad PDB record found on line 11995
REMARK IntraFull: 41.4343
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12046
REMARK Energy: 30.7992
Ignored bad PDB record found on line 12047
REMARK SimpleFitness: 30.7992
Ignored bad PDB record found on line 12048
REMARK FullFitness: -596.1899
Ignored bad PDB record found on line 12049
REMARK InterFull: -21.4222
Ignored bad PDB record found on line 12050
REMARK IntraFull: 41.5833
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12101
REMARK Energy: 29.0988
Ignored bad PDB record found on line 12102
REMARK SimpleFitness: 29.0988
Ignored bad PDB record found on line 12103
REMARK FullFitness: -596.97925
Ignored bad PDB record found on line 12104
REMARK InterFull: -24.64
Ignored bad PDB record found on line 12105
REMARK IntraFull: 38.1517
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12156
REMARK Energy: 29.5487
Ignored bad PDB record found on line 12157
REMARK SimpleFitness: 29.5487
Ignored bad PDB record found on line 12158
REMARK FullFitness: -596.9257
Ignored bad PDB record found on line 12159
REMARK InterFull: -24.8666
Ignored bad PDB record found on line 12160
REMARK IntraFull: 38.3339
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12211
REMARK Energy: 29.5487
Ignored bad PDB record found on line 12212
REMARK SimpleFitness: 29.5487
Ignored bad PDB record found on line 12213
REMARK FullFitness: -596.9257
Ignored bad PDB record found on line 12214
REMARK InterFull: -24.8666
Ignored bad PDB record found on line 12215
REMARK IntraFull: 38.3339
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12266
REMARK Energy: 29.5487
Ignored bad PDB record found on line 12267
REMARK SimpleFitness: 29.5487
Ignored bad PDB record found on line 12268
REMARK FullFitness: -596.9257
Ignored bad PDB record found on line 12269
REMARK InterFull: -24.8666
Ignored bad PDB record found on line 12270
REMARK IntraFull: 38.3339
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12321
REMARK Energy: 29.5554
Ignored bad PDB record found on line 12322
REMARK SimpleFitness: 29.5554
Ignored bad PDB record found on line 12323
REMARK FullFitness: -596.89716
Ignored bad PDB record found on line 12324
REMARK InterFull: -24.8179
Ignored bad PDB record found on line 12325
REMARK IntraFull: 38.3438
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12376
REMARK Energy: 29.5554
Ignored bad PDB record found on line 12377
REMARK SimpleFitness: 29.5554
Ignored bad PDB record found on line 12378
REMARK FullFitness: -596.89716
Ignored bad PDB record found on line 12379
REMARK InterFull: -24.8179
Ignored bad PDB record found on line 12380
REMARK IntraFull: 38.3438
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12431
REMARK Energy: 29.5554
Ignored bad PDB record found on line 12432
REMARK SimpleFitness: 29.5554
Ignored bad PDB record found on line 12433
REMARK FullFitness: -596.89716
Ignored bad PDB record found on line 12434
REMARK InterFull: -24.8179
Ignored bad PDB record found on line 12435
REMARK IntraFull: 38.3438
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12486
REMARK Energy: 29.5673
Ignored bad PDB record found on line 12487
REMARK SimpleFitness: 29.5673
Ignored bad PDB record found on line 12488
REMARK FullFitness: -596.8676
Ignored bad PDB record found on line 12489
REMARK InterFull: -24.8199
Ignored bad PDB record found on line 12490
REMARK IntraFull: 38.3903
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12541
REMARK Energy: 29.5673
Ignored bad PDB record found on line 12542
REMARK SimpleFitness: 29.5673
Ignored bad PDB record found on line 12543
REMARK FullFitness: -596.8676
Ignored bad PDB record found on line 12544
REMARK InterFull: -24.8199
Ignored bad PDB record found on line 12545
REMARK IntraFull: 38.3903
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12596
REMARK Energy: 30.5139
Ignored bad PDB record found on line 12597
REMARK SimpleFitness: 30.5139
Ignored bad PDB record found on line 12598
REMARK FullFitness: -596.9161
Ignored bad PDB record found on line 12599
REMARK InterFull: -25.586
Ignored bad PDB record found on line 12600
REMARK IntraFull: 43.8289
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12651
REMARK Energy: 30.5619
Ignored bad PDB record found on line 12652
REMARK SimpleFitness: 30.5619
Ignored bad PDB record found on line 12653
REMARK FullFitness: -596.9085
Ignored bad PDB record found on line 12654
REMARK InterFull: -26.4018
Ignored bad PDB record found on line 12655
REMARK IntraFull: 44.4133
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12706
REMARK Energy: 30.5515
Ignored bad PDB record found on line 12707
REMARK SimpleFitness: 30.5515
Ignored bad PDB record found on line 12708
REMARK FullFitness: -596.8288
Ignored bad PDB record found on line 12709
REMARK InterFull: -24.6379
Ignored bad PDB record found on line 12710
REMARK IntraFull: 43.3111
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12761
REMARK Energy: 30.8631
Ignored bad PDB record found on line 12762
REMARK SimpleFitness: 30.8631
Ignored bad PDB record found on line 12763
REMARK FullFitness: -596.735
Ignored bad PDB record found on line 12764
REMARK InterFull: -20.3103
Ignored bad PDB record found on line 12765
REMARK IntraFull: 41.5803
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12816
REMARK Energy: 30.8533
Ignored bad PDB record found on line 12817
REMARK SimpleFitness: 30.8533
Ignored bad PDB record found on line 12818
REMARK FullFitness: -596.71356
Ignored bad PDB record found on line 12819
REMARK InterFull: -20.3137
Ignored bad PDB record found on line 12820
REMARK IntraFull: 41.5881
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12871
REMARK Energy: 30.6652
Ignored bad PDB record found on line 12872
REMARK SimpleFitness: 30.6652
Ignored bad PDB record found on line 12873
REMARK FullFitness: -596.6095
Ignored bad PDB record found on line 12874
REMARK InterFull: -25.6017
Ignored bad PDB record found on line 12875
REMARK IntraFull: 42.2732
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12926
REMARK Energy: 30.2682
Ignored bad PDB record found on line 12927
REMARK SimpleFitness: 30.2682
Ignored bad PDB record found on line 12928
REMARK FullFitness: -596.4622
Ignored bad PDB record found on line 12929
REMARK InterFull: -23.7219
Ignored bad PDB record found on line 12930
REMARK IntraFull: 41.1557
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 12981
REMARK Energy: 30.2739
Ignored bad PDB record found on line 12982
REMARK SimpleFitness: 30.2739
Ignored bad PDB record found on line 12983
REMARK FullFitness: -596.4136
Ignored bad PDB record found on line 12984
REMARK InterFull: -23.7694
Ignored bad PDB record found on line 12985
REMARK IntraFull: 41.1918
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13036
REMARK Energy: 27.7409
Ignored bad PDB record found on line 13037
REMARK SimpleFitness: 27.7409
Ignored bad PDB record found on line 13038
REMARK FullFitness: -595.3181
Ignored bad PDB record found on line 13039
REMARK InterFull: -27.8461
Ignored bad PDB record found on line 13040
REMARK IntraFull: 37.264
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13091
REMARK Energy: 27.6543
Ignored bad PDB record found on line 13092
REMARK SimpleFitness: 27.6543
Ignored bad PDB record found on line 13093
REMARK FullFitness: -592.1805
Ignored bad PDB record found on line 13094
REMARK InterFull: -25.5129
Ignored bad PDB record found on line 13095
REMARK IntraFull: 37.8974
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13146
REMARK Energy: 31.3447
Ignored bad PDB record found on line 13147
REMARK SimpleFitness: 31.3447
Ignored bad PDB record found on line 13148
REMARK FullFitness: -590.3633
Ignored bad PDB record found on line 13149
REMARK InterFull: -25.0542
Ignored bad PDB record found on line 13150
REMARK IntraFull: 39.3219
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13201
REMARK Energy: 36.5184
Ignored bad PDB record found on line 13202
REMARK SimpleFitness: 36.5184
Ignored bad PDB record found on line 13203
REMARK FullFitness: -585.364
Ignored bad PDB record found on line 13204
REMARK InterFull: -24.7881
Ignored bad PDB record found on line 13205
REMARK IntraFull: 43.9941
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13256
REMARK Energy: 33.3716
Ignored bad PDB record found on line 13257
REMARK SimpleFitness: 33.3716
Ignored bad PDB record found on line 13258
REMARK FullFitness: -594.232
Ignored bad PDB record found on line 13259
REMARK InterFull: -19.5638
Ignored bad PDB record found on line 13260
REMARK IntraFull: 42.6868
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13311
REMARK Energy: 33.4698
Ignored bad PDB record found on line 13312
REMARK SimpleFitness: 33.4698
Ignored bad PDB record found on line 13313
REMARK FullFitness: -594.03467
Ignored bad PDB record found on line 13314
REMARK InterFull: -19.6225
Ignored bad PDB record found on line 13315
REMARK IntraFull: 43.1548
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13366
REMARK Energy: 33.5075
Ignored bad PDB record found on line 13367
REMARK SimpleFitness: 33.5075
Ignored bad PDB record found on line 13368
REMARK FullFitness: -593.8995
Ignored bad PDB record found on line 13369
REMARK InterFull: -19.8396
Ignored bad PDB record found on line 13370
REMARK IntraFull: 43.5281
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13421
REMARK Energy: 31.2812
Ignored bad PDB record found on line 13422
REMARK SimpleFitness: 31.2812
Ignored bad PDB record found on line 13423
REMARK FullFitness: -594.01245
Ignored bad PDB record found on line 13424
REMARK InterFull: -20.1598
Ignored bad PDB record found on line 13425
REMARK IntraFull: 42.7194
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13476
REMARK Energy: 36.1749
Ignored bad PDB record found on line 13477
REMARK SimpleFitness: 36.1749
Ignored bad PDB record found on line 13478
REMARK FullFitness: -589.77905
Ignored bad PDB record found on line 13479
REMARK InterFull: -21.4515
Ignored bad PDB record found on line 13480
REMARK IntraFull: 46.5555
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13531
REMARK Energy: 35.192
Ignored bad PDB record found on line 13532
REMARK SimpleFitness: 35.192
Ignored bad PDB record found on line 13533
REMARK FullFitness: -592.94635
Ignored bad PDB record found on line 13534
REMARK InterFull: -17.9578
Ignored bad PDB record found on line 13535
REMARK IntraFull: 38.2504
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13586
REMARK Energy: 35.0866
Ignored bad PDB record found on line 13587
REMARK SimpleFitness: 35.0866
Ignored bad PDB record found on line 13588
REMARK FullFitness: -592.9369
Ignored bad PDB record found on line 13589
REMARK InterFull: -17.931
Ignored bad PDB record found on line 13590
REMARK IntraFull: 38.1711
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13641
REMARK Energy: 34.9357
Ignored bad PDB record found on line 13642
REMARK SimpleFitness: 34.9357
Ignored bad PDB record found on line 13643
REMARK FullFitness: -592.4781
Ignored bad PDB record found on line 13644
REMARK InterFull: -18.2423
Ignored bad PDB record found on line 13645
REMARK IntraFull: 38.0872
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13696
REMARK Energy: 36.7196
Ignored bad PDB record found on line 13697
REMARK SimpleFitness: 36.7196
Ignored bad PDB record found on line 13698
REMARK FullFitness: -591.61816
Ignored bad PDB record found on line 13699
REMARK InterFull: -17.6584
Ignored bad PDB record found on line 13700
REMARK IntraFull: 40.9702
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13751
REMARK Energy: 31.8698
Ignored bad PDB record found on line 13752
REMARK SimpleFitness: 31.8698
Ignored bad PDB record found on line 13753
REMARK FullFitness: -590.7368
Ignored bad PDB record found on line 13754
REMARK InterFull: -23.3376
Ignored bad PDB record found on line 13755
REMARK IntraFull: 41.9888
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13806
REMARK Energy: 32.4529
Ignored bad PDB record found on line 13807
REMARK SimpleFitness: 32.4529
Ignored bad PDB record found on line 13808
REMARK FullFitness: -590.18
Ignored bad PDB record found on line 13809
REMARK InterFull: -25.5397
Ignored bad PDB record found on line 13810
REMARK IntraFull: 42.7327
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13861
REMARK Energy: 35.0918
Ignored bad PDB record found on line 13862
REMARK SimpleFitness: 35.0918
Ignored bad PDB record found on line 13863
REMARK FullFitness: -585.4654
Ignored bad PDB record found on line 13864
REMARK InterFull: -16.1306
Ignored bad PDB record found on line 13865
REMARK IntraFull: 39.6102
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13916
REMARK Energy: 31.9964
Ignored bad PDB record found on line 13917
REMARK SimpleFitness: 31.9964
Ignored bad PDB record found on line 13918
REMARK FullFitness: -590.6564
Ignored bad PDB record found on line 13919
REMARK InterFull: -31.51
Ignored bad PDB record found on line 13920
REMARK IntraFull: 43.8526
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 13971
REMARK Energy: 36.8367
Ignored bad PDB record found on line 13972
REMARK SimpleFitness: 36.8367
Ignored bad PDB record found on line 13973
REMARK FullFitness: -590.6216
Ignored bad PDB record found on line 13974
REMARK InterFull: -17.2744
Ignored bad PDB record found on line 13975
REMARK IntraFull: 42.8008
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
Ignored bad PDB record found on line 14026
REMARK Energy: 37.286
Ignored bad PDB record found on line 14027
REMARK SimpleFitness: 37.286
Ignored bad PDB record found on line 14028
REMARK FullFitness: -590.14386
Ignored bad PDB record found on line 14029
REMARK InterFull: -22.3303
Ignored bad PDB record found on line 14030
REMARK IntraFull: 48.7734
14 messages similar to the above omitted
Duplicate atom serial number found: 1834
Duplicate atom serial number found: 1835
Duplicate atom serial number found: 1836
Duplicate atom serial number found: 1837
Duplicate atom serial number found: 1838
30 messages similar to the above omitted
OpenGL version: 4.1 INTEL-22.1.28
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics OpenGL Engine (1x6x8 (fused) LP
OpenGL vendor: Intel Inc.
Python: 3.11.2
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: MacBookAir9,1
Processor Name: Dual-Core Intel Core i3
Processor Speed: 1.1 GHz
Number of Processors: 1
Total Number of Cores: 2
L2 Cache (per Core): 512 KB
L3 Cache: 4 MB
Hyper-Threading Technology: Enabled
Memory: 8 GB
System Firmware Version: 2020.41.1.0.0 (iBridge: 21.16.1069.0.0,0)
OS Loader Version: 580~743
Software:
System Software Overview:
System Version: macOS 14.1.1 (23B81)
Kernel Version: Darwin 23.1.0
Time since boot: 16 minutes, 1 second
Graphics/Displays:
Intel Iris Plus Graphics:
Chipset Model: Intel Iris Plus Graphics
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x8a5c
Revision ID: 0x0007
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.4.1
Babel: 2.13.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
blosc2: 2.0.0
build: 0.10.0
certifi: 2022.12.7
cftime: 1.6.3
charset-normalizer: 3.3.2
ChimeraX-AddCharge: 1.5.12
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.4.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.12.1
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.1.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.49.1
ChimeraX-AtomicLibrary: 12.1.2
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.10.5
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.3.2
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.5
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.7rc202311180239
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.2
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-Label: 1.1.8
ChimeraX-ListInfo: 1.2.1
ChimeraX-Log: 1.1.6
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.2
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12.1
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.13
ChimeraX-ModelPanel: 1.4
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.1
ChimeraX-NRRD: 1.1
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.13
ChimeraX-PDB: 2.7.2
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.3
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.2
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.11
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.2
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.12.2
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.33.2
ChimeraX-uniprot: 2.3
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.3.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.3
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.0
contourpy: 1.2.0
cxservices: 1.2.2
cycler: 0.12.1
Cython: 0.29.33
debugpy: 1.8.0
decorator: 5.1.1
docutils: 0.19
executing: 2.0.1
filelock: 3.9.0
fonttools: 4.44.3
funcparserlib: 1.0.1
glfw: 2.6.3
grako: 3.16.5
h5py: 3.10.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.38
imagecodecs: 2023.9.18
imagesize: 1.4.1
ipykernel: 6.23.2
ipython: 8.14.0
ipython-genutils: 0.2.0
ipywidgets: 8.1.1
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.2.0
jupyter-core: 5.5.0
jupyterlab-widgets: 3.0.9
kiwisolver: 1.4.5
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.3
matplotlib: 3.7.2
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.8
netCDF4: 1.6.2
networkx: 3.1
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.7
numpy: 1.25.1
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 10.0.1
pip: 23.0
pkginfo: 1.9.6
platformdirs: 4.0.0
prompt-toolkit: 3.0.41
psutil: 5.9.5
ptyprocess: 0.7.0
pure-eval: 0.2.2
py-cpuinfo: 9.0.0
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.16.1
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.2801
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.3.1
PyQt6-Qt6: 6.3.2
PyQt6-sip: 13.4.0
PyQt6-WebEngine-commercial: 6.3.1
PyQt6-WebEngine-Qt6: 6.3.2
python-dateutil: 2.8.2
pytz: 2023.3.post1
pyzmq: 25.1.1
qtconsole: 5.4.3
QtPy: 2.4.1
RandomWords: 0.4.0
requests: 2.31.0
scipy: 1.11.1
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.5
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.7
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.5
sphinxcontrib-htmlhelp: 2.0.4
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.6
sphinxcontrib-serializinghtml: 1.1.9
stack-data: 0.6.3
superqt: 0.5.0
tables: 3.8.0
tcia-utils: 1.5.1
tifffile: 2023.7.18
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.3.3
traitlets: 5.9.0
typing-extensions: 4.8.0
tzdata: 2023.3
urllib3: 2.1.0
wcwidth: 0.2.10
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.9
Change History (2)
comment:1 by , 2 years ago
| Component: | Unassigned → Graphics |
|---|---|
| Description: | modified (diff) |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Graphics hardware encountered an error and was reset |
comment:2 by , 2 years ago
| Resolution: | → nonchimerax |
|---|---|
| Status: | assigned → closed |
| Summary: | Graphics hardware encountered an error and was reset → Graphics crash, macOS 14.1.1, Intel Iris Plus Graphics |
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Apple Intel graphics driver crash.