Opened 2 years ago
Closed 2 years ago
#10143 closed defect (can't reproduce)
Crash in chain_trace_atoms after a 'combine'
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Structure Editing | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Linux-5.4.0-166-generic-x86_64-with-glibc2.31
ChimeraX Version: 1.5 (2022-11-24 00:03:27 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x00007f15403a1740 (most recent call first):
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/atomic/molobject.py", line 1597 in chain_trace_atoms
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/atomic/structure.py", line 469 in _update_chain_trace_graphics
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/atomic/structure.py", line 375 in _update_graphics
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/atomic/structure.py", line 359 in update_graphics_if_needed
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/atomic/structure.py", line 1778 in _update_graphics_if_needed
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/core/triggerset.py", line 134 in invoke
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/core/triggerset.py", line 217 in _activate
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/core/triggerset.py", line 186 in activate
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/core/triggerset.py", line 354 in activate_trigger
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/graphics/view.py", line 283 in check_for_drawing_change
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 65 in draw_new_frame
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139 in _redraw_timer_callback
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/ui/gui.py", line 283 in event_loop
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/core/__main__.py", line 884 in init
File "/usr/lib/ucsf-chimerax/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1035 in
File "/usr/lib/ucsf-chimerax/lib/python3.9/runpy.py", line 87 in _run_code
File "/usr/lib/ucsf-chimerax/lib/python3.9/runpy.py", line 197 in _run_module_as_main
===== Log before crash start =====
UCSF ChimeraX version: 1.5 (2022-11-24)
© 2016-2022 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open "/media/roberto/DataDisk3/Helical
> reconstructions/TMV/MapwithModel4UDV.cxs"
Opened run_class001.mrc as #4, grid size 300,300,300, pixel 1.13, shown at
level 0.00454, step 1, values float32
Opened EMD-2842.map as #1, grid size 210,210,190, pixel 1.06,1.06,1.06, shown
at level 1.47, step 1, values float32
Opened postprocess_masked.mrc as #3, grid size 300,300,300, pixel 1.13, shown
at level 0.0148, step 1, values float32
Opened 4udv map 4.5 as #5, grid size 59,50,44, pixel 1.5, shown at level
0.0903, step 1, values float32
opened ChimeraX session
> open "/media/roberto/DataDisk3/Helical reconstructions/TMV/4udv.pdb1"
4udv.pdb1 title:
Cryo-em structure of TMV At 3.35 A resolution [more info...]
Chain information for 4udv.pdb1
---
Chain | Description
6.1/A | No description available
6.2/A 6.3/A 6.4/A 6.5/A 6.6/A 6.7/A 6.8/A 6.9/A 6.10/A 6.11/A 6.12/A 6.13/A
6.14/A 6.15/A 6.16/A 6.17/A 6.18/A 6.19/A 6.20/A 6.21/A 6.22/A 6.23/A 6.24/A
6.25/A 6.26/A 6.27/A 6.28/A 6.29/A 6.30/A 6.31/A 6.32/A 6.33/A 6.34/A 6.35/A
6.36/A 6.37/A 6.38/A 6.39/A 6.40/A 6.41/A 6.42/A 6.43/A 6.44/A 6.45/A 6.46/A
6.47/A 6.48/A 6.49/A | No description available
6.1/R 6.2/R 6.3/R 6.4/R 6.5/R 6.6/R 6.7/R 6.8/R 6.9/R 6.10/R 6.11/R 6.12/R
6.13/R 6.14/R 6.15/R 6.16/R 6.17/R 6.18/R 6.19/R 6.20/R 6.21/R 6.22/R 6.23/R
6.24/R 6.25/R 6.26/R 6.27/R 6.28/R 6.29/R 6.30/R 6.31/R 6.32/R 6.33/R 6.34/R
6.35/R 6.36/R 6.37/R 6.38/R 6.39/R 6.40/R 6.41/R 6.42/R 6.43/R 6.44/R 6.45/R
6.46/R 6.47/R 6.48/R 6.49/R | No description available
> combine #6 #7
Remapping chain ID 'A' in 4udv.pdb1 #6.2 to 'B'
Remapping chain ID 'R' in 4udv.pdb1 #6.2 to 'S'
Remapping chain ID 'A' in 4udv.pdb1 #6.3 to 'C'
Remapping chain ID 'R' in 4udv.pdb1 #6.3 to 'T'
Remapping chain ID 'A' in 4udv.pdb1 #6.4 to 'D'
Remapping chain ID 'R' in 4udv.pdb1 #6.4 to 'U'
Remapping chain ID 'A' in 4udv.pdb1 #6.5 to 'E'
Remapping chain ID 'R' in 4udv.pdb1 #6.5 to 'V'
Remapping chain ID 'A' in 4udv.pdb1 #6.6 to 'F'
Remapping chain ID 'R' in 4udv.pdb1 #6.6 to 'W'
Remapping chain ID 'A' in 4udv.pdb1 #6.7 to 'G'
Remapping chain ID 'R' in 4udv.pdb1 #6.7 to 'X'
Remapping chain ID 'A' in 4udv.pdb1 #6.8 to 'H'
Remapping chain ID 'R' in 4udv.pdb1 #6.8 to 'Y'
Remapping chain ID 'A' in 4udv.pdb1 #6.9 to 'I'
Remapping chain ID 'R' in 4udv.pdb1 #6.9 to 'Z'
Remapping chain ID 'A' in 4udv.pdb1 #6.10 to 'J'
Remapping chain ID 'R' in 4udv.pdb1 #6.10 to 'a'
Remapping chain ID 'A' in 4udv.pdb1 #6.11 to 'K'
Remapping chain ID 'R' in 4udv.pdb1 #6.11 to 'b'
Remapping chain ID 'A' in 4udv.pdb1 #6.12 to 'L'
Remapping chain ID 'R' in 4udv.pdb1 #6.12 to 'c'
Remapping chain ID 'A' in 4udv.pdb1 #6.13 to 'M'
Remapping chain ID 'R' in 4udv.pdb1 #6.13 to 'd'
Remapping chain ID 'A' in 4udv.pdb1 #6.14 to 'N'
Remapping chain ID 'R' in 4udv.pdb1 #6.14 to 'e'
Remapping chain ID 'A' in 4udv.pdb1 #6.15 to 'O'
Remapping chain ID 'R' in 4udv.pdb1 #6.15 to 'f'
Remapping chain ID 'A' in 4udv.pdb1 #6.16 to 'P'
Remapping chain ID 'R' in 4udv.pdb1 #6.16 to 'g'
Remapping chain ID 'A' in 4udv.pdb1 #6.17 to 'Q'
Remapping chain ID 'R' in 4udv.pdb1 #6.17 to 'h'
Remapping chain ID 'A' in 4udv.pdb1 #6.18 to 'i'
Remapping chain ID 'R' in 4udv.pdb1 #6.18 to 'j'
Remapping chain ID 'A' in 4udv.pdb1 #6.19 to 'k'
Remapping chain ID 'R' in 4udv.pdb1 #6.19 to 'l'
Remapping chain ID 'A' in 4udv.pdb1 #6.20 to 'm'
Remapping chain ID 'R' in 4udv.pdb1 #6.20 to 'n'
Remapping chain ID 'A' in 4udv.pdb1 #6.21 to 'o'
Remapping chain ID 'R' in 4udv.pdb1 #6.21 to 'p'
Remapping chain ID 'A' in 4udv.pdb1 #6.22 to 'q'
Remapping chain ID 'R' in 4udv.pdb1 #6.22 to 'r'
Remapping chain ID 'A' in 4udv.pdb1 #6.23 to 's'
Remapping chain ID 'R' in 4udv.pdb1 #6.23 to 't'
Remapping chain ID 'A' in 4udv.pdb1 #6.24 to 'u'
Remapping chain ID 'R' in 4udv.pdb1 #6.24 to 'v'
Remapping chain ID 'A' in 4udv.pdb1 #6.25 to 'w'
Remapping chain ID 'R' in 4udv.pdb1 #6.25 to 'x'
Remapping chain ID 'A' in 4udv.pdb1 #6.26 to 'y'
Remapping chain ID 'R' in 4udv.pdb1 #6.26 to 'z'
Remapping chain ID 'A' in 4udv.pdb1 #6.27 to '1'
Remapping chain ID 'R' in 4udv.pdb1 #6.27 to '2'
Remapping chain ID 'A' in 4udv.pdb1 #6.28 to '3'
Remapping chain ID 'R' in 4udv.pdb1 #6.28 to '4'
Remapping chain ID 'A' in 4udv.pdb1 #6.29 to '5'
Remapping chain ID 'R' in 4udv.pdb1 #6.29 to '6'
Remapping chain ID 'A' in 4udv.pdb1 #6.30 to '7'
Remapping chain ID 'R' in 4udv.pdb1 #6.30 to '8'
Remapping chain ID 'A' in 4udv.pdb1 #6.31 to '9'
Remapping chain ID 'R' in 4udv.pdb1 #6.31 to '0'
Remapping chain ID 'A' in 4udv.pdb1 #6.32 to 'AA'
Remapping chain ID 'R' in 4udv.pdb1 #6.32 to 'AB'
Remapping chain ID 'A' in 4udv.pdb1 #6.33 to 'AC'
Remapping chain ID 'R' in 4udv.pdb1 #6.33 to 'AD'
Remapping chain ID 'A' in 4udv.pdb1 #6.34 to 'AE'
Remapping chain ID 'R' in 4udv.pdb1 #6.34 to 'AF'
Remapping chain ID 'A' in 4udv.pdb1 #6.35 to 'AG'
Remapping chain ID 'R' in 4udv.pdb1 #6.35 to 'AH'
Remapping chain ID 'A' in 4udv.pdb1 #6.36 to 'AI'
Remapping chain ID 'R' in 4udv.pdb1 #6.36 to 'AJ'
Remapping chain ID 'A' in 4udv.pdb1 #6.37 to 'AK'
Remapping chain ID 'R' in 4udv.pdb1 #6.37 to 'AL'
Remapping chain ID 'A' in 4udv.pdb1 #6.38 to 'AM'
Remapping chain ID 'R' in 4udv.pdb1 #6.38 to 'AN'
Remapping chain ID 'A' in 4udv.pdb1 #6.39 to 'AO'
Remapping chain ID 'R' in 4udv.pdb1 #6.39 to 'AP'
Remapping chain ID 'A' in 4udv.pdb1 #6.40 to 'AQ'
Remapping chain ID 'R' in 4udv.pdb1 #6.40 to 'AR'
Remapping chain ID 'A' in 4udv.pdb1 #6.41 to 'AS'
Remapping chain ID 'R' in 4udv.pdb1 #6.41 to 'AT'
Remapping chain ID 'A' in 4udv.pdb1 #6.42 to 'AU'
Remapping chain ID 'R' in 4udv.pdb1 #6.42 to 'AV'
Remapping chain ID 'A' in 4udv.pdb1 #6.43 to 'AW'
Remapping chain ID 'R' in 4udv.pdb1 #6.43 to 'AX'
Remapping chain ID 'A' in 4udv.pdb1 #6.44 to 'AY'
Remapping chain ID 'R' in 4udv.pdb1 #6.44 to 'AZ'
Remapping chain ID 'A' in 4udv.pdb1 #6.45 to 'Aa'
Remapping chain ID 'R' in 4udv.pdb1 #6.45 to 'Ab'
Remapping chain ID 'A' in 4udv.pdb1 #6.46 to 'Ac'
Remapping chain ID 'R' in 4udv.pdb1 #6.46 to 'Ad'
Remapping chain ID 'A' in 4udv.pdb1 #6.47 to 'Ae'
Remapping chain ID 'R' in 4udv.pdb1 #6.47 to 'Af'
Remapping chain ID 'A' in 4udv.pdb1 #6.48 to 'Ag'
Remapping chain ID 'R' in 4udv.pdb1 #6.48 to 'Ah'
Remapping chain ID 'A' in 4udv.pdb1 #6.49 to 'Ai'
Remapping chain ID 'R' in 4udv.pdb1 #6.49 to 'Aj'
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.5 (2022-11-24)
© 2016-2022 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 3.3.0 NVIDIA 525.147.05
OpenGL renderer: NVIDIA GeForce RTX 2080 Ti/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Python: 3.9.11
Locale: en_US.UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: xcb
XDG_SESSION_TYPE=x11
DESKTOP_SESSION=unity
XDG_SESSION_DESKTOP=unity
XDG_CURRENT_DESKTOP=Unity:Unity7:ubuntu
DISPLAY=:0
Manufacturer: System manufacturer
Model: System Product Name
OS: Ubuntu 20.04 Focal Fossa
Architecture: 64bit ELF
Virtual Machine: none
CPU: 28 Intel(R) Core(TM) i9-7940X CPU @ 3.10GHz
Cache Size: 19712 KB
Memory:
total used free shared buff/cache available
Mem: 125Gi 2.3Gi 107Gi 95Mi 15Gi 121Gi
Swap: 18Gi 0B 18Gi
Graphics:
1a:00.0 VGA compatible controller [0300]: NVIDIA Corporation TU102 [GeForce RTX 2080 Ti Rev. A] [10de:1e07] (rev a1)
Subsystem: ASUSTeK Computer Inc. TU102 [GeForce RTX 2080 Ti Rev. A] [1043:866a]
Kernel driver in use: nvidia
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
asttokens: 2.1.0
Babel: 2.11.0
backcall: 0.2.0
blockdiag: 3.0.0
build: 0.8.0
certifi: 2022.9.24
cftime: 1.6.2
charset-normalizer: 2.1.1
ChimeraX-AddCharge: 1.4
ChimeraX-AddH: 2.2.1
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2.1
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.6
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.41.5
ChimeraX-AtomicLibrary: 8.0.3
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.7.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.1
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.2
ChimeraX-CommandLine: 1.2.4
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.5
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.1
ChimeraX-DistMonitor: 1.3
ChimeraX-DockPrep: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.2
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-LinuxSupport: 1.0.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.1
ChimeraX-MatchMaker: 2.0.9
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.8
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.6
ChimeraX-ModelPanel: 1.3.6
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.1
ChimeraX-MouseModes: 1.1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.9.1
ChimeraX-PDB: 2.6.8
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.7.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.1.3
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.24.3
ChimeraX-uniprot: 2.2.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.1.4
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.1
ChimeraX-WebServices: 1.1.0
ChimeraX-Zone: 1.0.1
colorama: 0.4.5
cxservices: 1.2
cycler: 0.11.0
Cython: 0.29.32
debugpy: 1.6.4
decorator: 5.1.1
distro: 1.7.0
docutils: 0.19
entrypoints: 0.4
executing: 1.2.0
filelock: 3.7.1
fonttools: 4.38.0
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.7.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.33
imagecodecs: 2022.7.31
imagesize: 1.4.1
importlib-metadata: 5.1.0
ipykernel: 6.15.3
ipython: 8.4.0
ipython-genutils: 0.2.0
jedi: 0.18.1
Jinja2: 3.1.2
jupyter-client: 7.3.4
jupyter-core: 5.1.0
kiwisolver: 1.4.4
line-profiler: 3.5.1
lxml: 4.9.1
lz4: 4.0.2
MarkupSafe: 2.1.1
matplotlib: 3.5.2
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.0
networkx: 2.8.5
numexpr: 2.8.4
numpy: 1.23.1
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.2.0
pip: 22.2.2
pkginfo: 1.8.3
platformdirs: 2.5.4
prompt-toolkit: 3.0.33
psutil: 5.9.1
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.12.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
PyQt6-commercial: 6.3.1
PyQt6-Qt6: 6.3.2
PyQt6-sip: 13.4.0
PyQt6-WebEngine-commercial: 6.3.1
PyQt6-WebEngine-Qt6: 6.3.2
python-dateutil: 2.8.2
pytz: 2022.6
pyzmq: 24.0.1
qtconsole: 5.3.1
QtPy: 2.3.0
RandomWords: 0.4.0
requests: 2.28.1
scipy: 1.9.0
setuptools: 65.1.1
sfftk-rw: 0.7.2
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 5.1.1
sphinx-autodoc-typehints: 1.19.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tifffile: 2022.7.31
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.2
traitlets: 5.3.0
urllib3: 1.26.13
wcwidth: 0.2.5
webcolors: 1.12
wheel: 0.37.1
wheel-filename: 1.4.1
zipp: 3.11.0
Change History (2)
comment:1 by , 2 years ago
| Component: | Unassigned → Structure Editing |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in chain_trace_atoms after a 'combine' |
comment:2 by , 2 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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