Opened 2 years ago

Closed 2 years ago

Last modified 2 years ago

#10133 closed defect (not a bug)

Act on open model from command line

Reported by: matt.jaremko@… Owned by: Eric Pettersen
Priority: normal Milestone:
Component: Command Line Version:
Keywords: Cc: Elaine Meng, Tom Goddard
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

Hello,

Is there any way to act only on the open model on the command line without directly specifying the model #? I know that most of the functions on the upper toolbar work this way, but I’d like to also do that sometimes via the command line.

Thank you,
Matt

Matt J. Jaremko, Ph.D. (He|Him)
Senior Scientist | Protein & Structural Chemistry
Merck Research Labs | 2000 Galloping Hill Rd. | Kenilworth, NJ 07033
Office:  908.740.5613 | Cell:  808.741.6277 | Email:  matt.jaremko@merck.com<mailto:matt.jaremko@merck.com>

This e-mail message, together with any attachments, contains information of Merck & Co., Inc. (126 East Lincoln Ave., P.O. Box 2000, Rahway, NJ USA 07065) and/or its affiliates, that may be confidential, proprietary copyrighted and/or legally privileged.   (Direct contact information for affiliates is available at - Contact us - MSD<https://www.msd.com/contact-us/>.)  It is intended solely for the use of the individual or entity named on this message. If you are not the intended recipient, and have received this message in error, please notify us immediately by reply e-mail and then delete it from your system.

Change History (3)

comment:1 by Eric Pettersen, 2 years ago

Cc: Elaine Meng Tom Goddard added
Component: UnassignedCommand Line
Owner: set to Eric Pettersen
Platform: all
Project: ChimeraX
Status: newaccepted

comment:2 by Eric Pettersen, 2 years ago

Resolution: not a bug
Status: acceptedclosed

Hi Matt,

For most commands, simply omitting the atom/model specifier will have the command work on all applicable models (e.g. "color red"). For the few that always require a specifier, the specifier #* is a synonym for all models.
FYI, a usage question like this is more appropriate for the chimerax-users mailing list than as a bug report, and will likely be answered faster if you send it to that list.

--Eric

Eric Pettersen
UCSF Computer Graphics Lab

comment:3 by matt.jaremko@…, 2 years ago

Thanks Eric, sounds good.

Matt

\ufeffOn 11/13/23, 12:35 PM, "ChimeraX" <ChimeraX-bugs-admin@cgl.ucsf.edu <mailto:ChimeraX-bugs-admin@cgl.ucsf.edu>> wrote:


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#10133: Act on open model from command line
-------------------------------------+--------------------
Reporter: matt.jaremko@\u2026 | Owner: pett
Type: defect | Status: closed
Priority: normal | Milestone:
Component: Command Line | Version:
Resolution: not a bug | Keywords:
Blocked By: | Blocking:
Notify when closed: | Platform: all
Project: ChimeraX |
-------------------------------------+--------------------
Changes (by pett):


* resolution: => not a bug
* status: accepted => closed


Comment:


Hi Matt,
For most commands, simply omitting the atom/model specifier will
have the command work on all applicable models (e.g. "color red"). For
the few that always require a specifier, the specifier #* is a synonym for
all models.
FYI, a usage question like this is more appropriate for the
chimerax-users mailing list than as a bug report, and will likely be
answered faster if you send it to that list.


--Eric


Eric Pettersen
UCSF Computer Graphics Lab
--
Ticket URL: <https://www.rbvi.ucsf.edu/trac/ChimeraX/ticket/10133#comment:2> <https://www.rbvi.ucsf.edu/trac/ChimeraX/ticket/10133#comment:2&gt;>
ChimeraX <https://www.rbvi.ucsf.edu/chimerax/> <https://www.rbvi.ucsf.edu/chimerax/&gt;>
ChimeraX Issue Tracker



This e-mail message, together with any attachments, contains information of Merck & Co., Inc. (126 East Lincoln Ave., P.O. Box 2000, Rahway, NJ USA 07065) and/or its affiliates, that may be confidential, proprietary copyrighted and/or legally privileged.   (Direct contact information for affiliates is available at - Contact us - MSD<https://www.msd.com/contact-us/>.)  It is intended solely for the use of the individual or entity named on this message. If you are not the intended recipient, and have received this message in error, please notify us immediately by reply e-mail and then delete it from your system.
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