Opened 2 years ago

Closed 2 years ago

#10118 closed enhancement (fixed)

Add user agent to ColabFold run sequence search

Reported by: Tom Goddard Owned by: Tom Goddard
Priority: moderate Milestone:
Component: Structure Prediction Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

ColabFold is complaining that it wants a user agent set in the request for a sequence alignment so it can identify the software using the service.

From: "Margulies, David (NIH/NIAID) [E]"
Subject: Re: [EXTERNAL] [chimerax-users] Alphafold2_multimer on chimeraX
Date: November 8, 2023 at 12:11:47 PM PST
To: Tom Goddard

Looks like it’s working as usual. Requested by google logon again, but ran fine. A few lines in the log I don’t understand:

2023-11-08 19:37:55,336 Unable to initialize backend 'rocm': NOT_FOUND: Could not find registered platform with name: "rocm". Available platform names are: CUDA
2023-11-08 19:37:55,338 Unable to initialize backend 'tpu': INTERNAL: Failed to open libtpu.so: libtpu.so: cannot open shared object file: No such file or directory

2023-11-08 19:39:53,916 No user agent specified. Please set a user agent (e.g., 'toolname/version contact@email') to help us debug in case of problems. This warning will become an error in the future.

Other than that, worked as well as expected. Thanks for your help!

D
David H. Margulies, MD, PhD

Change History (1)

comment:1 by Tom Goddard, 2 years ago

Resolution: fixed
Status: assignedclosed

Done.

Added user agent "ChimeraX chimerax-programmers@…".

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