![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 2 years ago
Closed 2 years ago
#10002 closed defect (duplicate)
Crash in QTabBar::paintEvent(QPaintEvent*)
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-13.6-arm64-arm-64bit
ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x00000002076ce080 (most recent call first):
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 892 in init
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
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{
"uptime" : 160000,
"procRole" : "Background",
"version" : 2,
"userID" : 504,
"deployVersion" : 210,
"modelCode" : "Mac14,2",
"coalitionID" : 10062,
"osVersion" : {
"train" : "macOS 13.6",
"build" : "22G120",
"releaseType" : "User"
},
"captureTime" : "2023-10-16 11:14:05.4980 +1100",
"incident" : "4A4B9866-8EA9-4D7D-A47A-037E5F224694",
"pid" : 69311,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2023-10-13 17:00:44.5975 +1100",
"procStartAbsTime" : 3372463233686,
"procExitAbsTime" : 3951920030880,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.6.1","CFBundleVersion":"1.6.1.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"302B2585-C75D-5312-AAF2-44B21D7F3983","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "ACF13197-89FB-A1BA-066A-5560230EEF60",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 0,
"wakeTime" : 5,
"sleepWakeUUID" : "27FD3018-D3CC-421E-9A23-D8BA71B83288",
"sip" : "enabled",
"vmRegionInfo" : "0x18 is not in any region. Bytes before following region: 105553518919656\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n MALLOC_NANO (reserved) 600018000000-600020000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)",
"exception" : {"codes":"0x0000000000000001, 0x0000000000000018","rawCodes":[1,24],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000000000000018"},
"termination" : {"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault: 11","byProc":"ChimeraX","byPid":69311},
"vmregioninfo" : "0x18 is not in any region. Bytes before following region: 105553518919656\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n MALLOC_NANO (reserved) 600018000000-600020000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)",
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"faultingThread" : 0,
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===== Log before crash start =====
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb"
> "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/211_homodimer_c8667_unrelaxed_rank_002_alphafold2_multimer_v3_model_2_seed_000.pdb"
> "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/211_homodimer_c8667_unrelaxed_rank_003_alphafold2_multimer_v3_model_5_seed_000.pdb"
> "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/211_homodimer_c8667_unrelaxed_rank_004_alphafold2_multimer_v3_model_4_seed_000.pdb"
> "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/211_homodimer_c8667_unrelaxed_rank_005_alphafold2_multimer_v3_model_1_seed_000.pdb"
Chain information for
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb
#1
---
Chain | Description
A B | No description available
Chain information for
211_homodimer_c8667_unrelaxed_rank_002_alphafold2_multimer_v3_model_2_seed_000.pdb
#2
---
Chain | Description
A B | No description available
Chain information for
211_homodimer_c8667_unrelaxed_rank_003_alphafold2_multimer_v3_model_5_seed_000.pdb
#3
---
Chain | Description
A B | No description available
Chain information for
211_homodimer_c8667_unrelaxed_rank_004_alphafold2_multimer_v3_model_4_seed_000.pdb
#4
---
Chain | Description
A B | No description available
Chain information for
211_homodimer_c8667_unrelaxed_rank_005_alphafold2_multimer_v3_model_1_seed_000.pdb
#5
---
Chain | Description
A B | No description available
> ui tool show Matchmaker
> matchmaker #2-5 to #1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1) with
211_homodimer_c8667_unrelaxed_rank_002_alphafold2_multimer_v3_model_2_seed_000.pdb,
chain A (#2), sequence alignment score = 1085.2
RMSD between 204 pruned atom pairs is 0.336 angstroms; (across all 204 pairs:
0.336)
Matchmaker
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1) with
211_homodimer_c8667_unrelaxed_rank_003_alphafold2_multimer_v3_model_5_seed_000.pdb,
chain A (#3), sequence alignment score = 1085.2
RMSD between 204 pruned atom pairs is 0.112 angstroms; (across all 204 pairs:
0.112)
Matchmaker
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1) with
211_homodimer_c8667_unrelaxed_rank_004_alphafold2_multimer_v3_model_4_seed_000.pdb,
chain A (#4), sequence alignment score = 1081.6
RMSD between 204 pruned atom pairs is 0.186 angstroms; (across all 204 pairs:
0.186)
Matchmaker
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1) with
211_homodimer_c8667_unrelaxed_rank_005_alphafold2_multimer_v3_model_1_seed_000.pdb,
chain A (#5), sequence alignment score = 1085.2
RMSD between 204 pruned atom pairs is 0.339 angstroms; (across all 204 pairs:
0.339)
> matchmaker #2-5 to #1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1) with
211_homodimer_c8667_unrelaxed_rank_002_alphafold2_multimer_v3_model_2_seed_000.pdb,
chain A (#2), sequence alignment score = 1085.2
RMSD between 204 pruned atom pairs is 0.336 angstroms; (across all 204 pairs:
0.336)
Matchmaker
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1) with
211_homodimer_c8667_unrelaxed_rank_003_alphafold2_multimer_v3_model_5_seed_000.pdb,
chain A (#3), sequence alignment score = 1085.2
RMSD between 204 pruned atom pairs is 0.112 angstroms; (across all 204 pairs:
0.112)
Matchmaker
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1) with
211_homodimer_c8667_unrelaxed_rank_004_alphafold2_multimer_v3_model_4_seed_000.pdb,
chain A (#4), sequence alignment score = 1081.6
RMSD between 204 pruned atom pairs is 0.186 angstroms; (across all 204 pairs:
0.186)
Matchmaker
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1) with
211_homodimer_c8667_unrelaxed_rank_005_alphafold2_multimer_v3_model_1_seed_000.pdb,
chain A (#5), sequence alignment score = 1085.2
RMSD between 204 pruned atom pairs is 0.339 angstroms; (across all 204 pairs:
0.339)
> color #2 tan
> color #3 tan
> color #4 tan
> color #5 tan
> fetch 2TCT
Unknown command: fetch 2TCT
> fetch 2TCTfetch
Unknown command: fetch 2TCTfetch
> fetch
Unknown command: fetch
> fetch
Unknown command: fetch
> select #1/A#2/A#3/A#4/A#5/A
8085 atoms, 8235 bonds, 1020 residues, 5 models selected
> color sel #2effffff
> color sel #44e7ffff
> color sel #76ff65ff
> color sel #4df6ffff
> color sel #4cf6ffff
> color sel #41f6ffff
> color sel #40f6ffff
> select clear
> save "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/211_homodimer_c8667_env/overlaid homodimers
> AF2.cxs"
> open "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/2tct.pdb"
2tct.pdb title:
The complex formed between tet repressor and tetracycline-MG2+ reveals
mechanism of antibiotic resistance [more info...]
Chain information for 2tct.pdb #6
---
Chain | Description | UniProt
A | tetracycline repressor | TETR4_ECOLI 2-208
Non-standard residues in 2tct.pdb #6
---
CTC — 7-chlorotetracycline
MG — magnesium ion
> ui tool show Matchmaker
> matchmaker #2-5 to #6
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker 2tct.pdb, chain A (#6) with
211_homodimer_c8667_unrelaxed_rank_002_alphafold2_multimer_v3_model_2_seed_000.pdb,
chain A (#2), sequence alignment score = 751
RMSD between 185 pruned atom pairs is 0.751 angstroms; (across all 194 pairs:
1.089)
Matchmaker 2tct.pdb, chain A (#6) with
211_homodimer_c8667_unrelaxed_rank_003_alphafold2_multimer_v3_model_5_seed_000.pdb,
chain A (#3), sequence alignment score = 751
RMSD between 188 pruned atom pairs is 0.709 angstroms; (across all 194 pairs:
0.973)
Matchmaker 2tct.pdb, chain A (#6) with
211_homodimer_c8667_unrelaxed_rank_004_alphafold2_multimer_v3_model_4_seed_000.pdb,
chain A (#4), sequence alignment score = 754
RMSD between 188 pruned atom pairs is 0.713 angstroms; (across all 194 pairs:
0.966)
Matchmaker 2tct.pdb, chain A (#6) with
211_homodimer_c8667_unrelaxed_rank_005_alphafold2_multimer_v3_model_1_seed_000.pdb,
chain A (#5), sequence alignment score = 751
RMSD between 187 pruned atom pairs is 0.739 angstroms; (across all 194 pairs:
1.036)
> matchmaker #1 to #6
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker 2tct.pdb, chain A (#6) with
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1), sequence alignment score = 751
RMSD between 188 pruned atom pairs is 0.733 angstroms; (across all 194 pairs:
0.998)
> matchmaker #1 to #6
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker 2tct.pdb, chain A (#6) with
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1), sequence alignment score = 751
RMSD between 188 pruned atom pairs is 0.733 angstroms; (across all 194 pairs:
0.998)
> hide #6.2 models
> show #6.2 models
> hide #6.2 models
> hide #6.1 models
> hide #!6 models
> show #!6 models
> hide #!6 models
> show #!6 models
> hide #!6 models
> show #!6 models
> hide #!6 models
> open "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/2tct.pdb1"
2tct.pdb1 title:
The complex formed between tet repressor and tetracycline-MG2+ reveals
mechanism of antibiotic resistance [more info...]
Chain information for 2tct.pdb1
---
Chain | Description
7.1/A | No description available
7.2/A | No description available
> ui tool show Matchmaker
> matchmaker #!7.1-2 to #1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1) with 2tct.pdb1, chain A (#7.1), sequence alignment score = 751
RMSD between 188 pruned atom pairs is 0.733 angstroms; (across all 194 pairs:
0.998)
Matchmaker
211_homodimer_c8667_unrelaxed_rank_001_alphafold2_multimer_v3_model_3_seed_000.pdb,
chain A (#1) with 2tct.pdb1, chain A (#7.2), sequence alignment score = 733.2
RMSD between 188 pruned atom pairs is 0.733 angstroms; (across all 194 pairs:
0.998)
> hide #!7.2 models
> show #!7.2 models
> hide #!7.2 models
> show #!7.2 models
> hide #!7.2 models
> hide #!7.1 models
> show #!7.1 models
> show #!7.2 models
> hide #!7.1 models
> hide #!7.2 models
> hide #!7 models
> show #!7 models
> close #6-7
> open "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/2tct.pdb"
2tct.pdb title:
The complex formed between tet repressor and tetracycline-MG2+ reveals
mechanism of antibiotic resistance [more info...]
Chain information for 2tct.pdb #6
---
Chain | Description | UniProt
A | tetracycline repressor | TETR4_ECOLI 2-208
Non-standard residues in 2tct.pdb #6
---
CTC — 7-chlorotetracycline
MG — magnesium ion
> close #6
> open "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/2tct.pdb1"
2tct.pdb1 title:
The complex formed between tet repressor and tetracycline-MG2+ reveals
mechanism of antibiotic resistance [more info...]
Chain information for 2tct.pdb1
---
Chain | Description
6.1/A | No description available
6.2/A | No description available
> hide #1 models
> hide #2 models
> hide #3 models
> hide #4 models
> hide #5 models
> show #1 models
> hide #1 models
> show #1 models
> hide #1 models
> show #1 models
> hide #1 models
> show #1 models
> hide #1 models
> show #1 models
> show #2 models
> show #3 models
> show #4 models
> hide #!6 models
> show #!6 models
> show #5 models
> hide #5 models
> show #5 models
> hide #5 models
> hide #4 models
> hide #3 models
> hide #2 models
> hide #1 models
> show #1 models
> show #2 models
> show #3 models
> show #4 models
> show #5 models
> ui tool show Matchmaker
> save "/Users/danh/Desktop/Desktop Aug
> 2023/paper/211_homodimer_c8667/homodimers alignes with 2TCT.cxs"
> select #1/A#2/A#3/A#4/A#5/A#6.1/A#6.2/A
11569 atoms, 11505 bonds, 9 pseudobonds, 1690 residues, 11 models selected
> color (#1-5#!6.1-2 & sel) #d2b48cff
> select clear
> log metadata #6.1
Metadata for 2tct.pdb1 #6.1
---
Title | The complex formed between tet repressor and tetracycline-MG2+ reveals
mechanism of antibiotic resistance
Citation | The complex formed between tet repressor andtetracycline-MG2+
reveals mechanism of antibioticresistance. PMID: 7707374
Non-standard residues | CTC — 7-chlorotetracycline
MG — magnesium ion
Experimental method | X-ray diffraction
> log chains #6.1
Chain information for 2tct.pdb1 #6.1
---
Chain | Description
A | No description available
> log metadata #6.2
No models had metadata
> log chains #6.2
Chain information for 2tct.pdb1 #6.2
---
Chain | Description
A | No description available
> select :CTC
66 atoms, 72 bonds, 2 residues, 2 models selected
> select :MG
2 atoms, 2 residues, 2 models selected
> select :CTC
66 atoms, 72 bonds, 2 residues, 2 models selected
> select :MG
2 atoms, 2 residues, 2 models selected
> select :CTC
66 atoms, 72 bonds, 2 residues, 2 models selected
> select :MG
2 atoms, 2 residues, 2 models selected
> select #6.1/A:2-208
1573 atoms, 1599 bonds, 1 pseudobond, 198 residues, 2 models selected
> color (#!6.1 & sel) #3edcdbff
> show #!6.2 target m
> select #6.2/A:2-208
1573 atoms, 1599 bonds, 1 pseudobond, 198 residues, 2 models selected
> color (#!6.2 & sel) #3edcdbff
> select clear
> select :CTC
66 atoms, 72 bonds, 2 residues, 2 models selected
> color sel #23dc35ff
> color sel #2bdc29ff
> color sel #2bdc2aff
> color sel #2bdc2bff
> color sel #2cdc2cff
> color sel #2ddc2dff
> color sel #30dc32ff
> color sel #32dc35ff
> color sel #36dc3cff
> color sel #38dc3fff
> color sel #3adc41ff
> color sel #3bdc44ff
> color sel #3cdc45ff
> color sel #3ddc46ff
> color sel #3ddc47ff
> color sel #3ddc46ff
> color sel #3cdc45ff
> color sel #3bdc44ff
> color sel #3bdc43ff
> color sel #3adc42ff
> color sel #3adc41ff
> color sel #39dc40ff
> color sel #38dc3fff
> color sel #37dc3eff
> color sel #36dc3cff
> color sel #34dc39ff
> color sel #34dc38ff
> color sel #33dc37ff
> color sel #32dc35ff
> color sel #31dc34ff
> color sel #30dc33ff
> color sel #2fdc30ff
> color sel #2edc30ff
> color sel #2edc2fff
> color sel #26dc24ff
> color sel #26dc25ff
> color sel #27dc26ff
> hide #6.1.1 models
> show #6.1.1 models
> hide #6.1.1 models
> hide #6.2.1 models
> select clear
> hide #2 models
> hide #3 models
> hide #4 models
> hide #5 models
> show #2 models
> show #3 models
> show #4 models
> show #5 models
> ui tool show "AlphaFold Error Plot"
> ui tool show ViewDockX
No suitable models found for ViewDockX
> hide #!6 models
> show #!6 models
> hide #!6 models
> show #!6 models
> hide #!6 models
> show #!6 models
> hide #!6 models
> show #!6 models
> hide #!6 models
> show #!6 models
> hide #!6 models
> show #!6 models
> hide #!6 models
QPainter::begin: Paint device returned engine == 0, type: 3
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 83.1
OpenGL renderer: Apple M2
OpenGL vendor: Apple
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: Mac14,2
Model Number: Z1610002YX/A
Chip: Apple M2
Total Number of Cores: 8 (4 performance and 4 efficiency)
Memory: 16 GB
System Firmware Version: 10151.1.1
OS Loader Version: 8422.141.2
Software:
System Software Overview:
System Version: macOS 13.6 (22G120)
Kernel Version: Darwin 22.6.0
Time since boot: 10 days, 43 minutes
Graphics/Displays:
Apple M2:
Chipset Model: Apple M2
Type: GPU
Bus: Built-In
Total Number of Cores: 10
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
DELL U3419W:
Resolution: 3440 x 1440 (UWQHD - Ultra-Wide Quad HD)
UI Looks like: 3440 x 1440 @ 60.00Hz
Main Display: Yes
Mirror: On
Mirror Status: Master Mirror
Online: Yes
Rotation: Supported
Color LCD:
Display Type: Built-in Liquid Retina Display
Resolution: 2560 x 1664 Retina
Mirror: On
Mirror Status: Hardware Mirror
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.12.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
build: 0.10.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 3.1.0
ChimeraX-AddCharge: 1.5.9.1
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.9.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.43.10
ChimeraX-AtomicLibrary: 10.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.8
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6.1
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.12
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.9
ChimeraX-ModelPanel: 1.3.7
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.0
ChimeraX-NRRD: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10.1
ChimeraX-PDB: 2.7.2
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.3
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.28.4
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.1.3
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.33
debugpy: 1.6.7
decorator: 5.1.1
docutils: 0.19
executing: 1.2.0
filelock: 3.9.0
fonttools: 4.39.3
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.2.22
imagesize: 1.4.1
importlib-metadata: 6.6.0
ipykernel: 6.21.1
ipython: 8.10.0
ipython-genutils: 0.2.0
ipywidgets: 8.0.6
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.0.2
jupyter-core: 5.3.0
jupyterlab-widgets: 3.0.7
kiwisolver: 1.4.4
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.2
matplotlib: 3.6.3
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.2
networkx: 2.8.8
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 3.5.0
prompt-toolkit: 3.0.38
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.14.0
pynrrd: 1.0.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.4.2
PyQt6-Qt6: 6.4.3
PyQt6-sip: 13.4.1
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.3
python-dateutil: 2.8.2
pytz: 2023.3
pyzmq: 25.0.2
qtconsole: 5.4.0
QtPy: 2.3.1
RandomWords: 0.4.0
requests: 2.28.2
scipy: 1.9.3
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.4.1
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.1
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tcia-utils: 1.2.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.3.1
traitlets: 5.9.0
typing-extensions: 4.5.0
tzdata: 2023.3
urllib3: 1.26.15
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.7
zipp: 3.15.0
Change History (2)
comment:1 by , 2 years ago
| Component: | Unassigned → Window Toolkit |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Crash in QTabBar::paintEvent(QPaintEvent*) |
comment:2 by , 2 years ago
| Resolution: | → duplicate |
|---|---|
| Status: | assigned → closed |
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