[Chimera-users] transparency for surface in intersurf

[Jean-Didier Maréchal]

Hi Elaine,

just worked fine. I guess I used an too old built version for which
intersurf surface weren't behaving as standard surface.

thank you very much.
jd

****************************
Dr. Jean-Didier Maréchal
Lecturer
The Computational Biotechnological Chemistry Team
Unitat de Química Física
Departament de Química
Universitat Autònoma de Barcelona
Edifici C.n.
08193 Cerdanyola (Barcelona)
Tel: +34.935814936
e-mail: JeanDidier.Marechal at uab.es
www: http://asklipio.qf.uab.es



2012/6/5 Elaine Meng <meng at cgl.ucsf.edu>

> Hi JD,
> You can use the menu: Actions... Surface... transparency...[%value]
>
> or the "surftransparency" command, where the intersurf surface can be
> specified by model number (#N) or by selecting it with Ctrl-click and using
> the word "sel":
>
> <
> http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/surftransparency.html
> >
> <
> http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/atom_spec.html#othermodels
> >
>
> Also, in Chimera version 1.7 (fairly recent daily build), there is a
> "transparency" command that can be used on not just surfaces but other
> items (atoms, ribbons, etc.):
>
> <http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/transparency.html>
>
> I hope this helps,
> Elaine
> ----------
> Elaine C. Meng, Ph.D.
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
>
>
> On Jun 5, 2012, at 12:44 PM, Jean-Didier Maréchal wrote:
>
> > Hi guys,
> > is there a way to change the transparency of intersurf objects? I'd like
> to have the surface not hiden all the object in behing one given view.
> > thanks a lot,
> > cheers
> > jd
>
>
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