[Chimera-users] Command for Selecting Marker & Color Zone

Tom Goddard goddard at sonic.net
Tue Mar 8 17:43:05 PST 2011

Hi Huy,

   Ok I added a Chimera command equivalent to the color zone dialog.  
For example

     scolor #5 zone #1-3 range 10

will color the surface of density map #5 using marker sets #1,2,3 to 
match the marker colors within a distance 10 Angstroms from any marker.  
This will be in tonight's Chimera daily builds.


> Dear Chimera Mailing list,
> I have a density map and 3 marker sets for coloring my density map. Is this possible to select the 3 marker sets and color my density map with a selected radius (Color Zone tool) by command line?
> Best,
> Huy
> --------------------------------
> Huy K. Bui
> Institute of Molecular Biology and Biophysics
> Swiss Federal Institute of Technology (ETH Zürich)
> ETH Hönggerberg, HPK F18
> CH-8093 Zürich, Switzerland
> phone: +41 44-633-3746
> fax:  : +41 44-633-1073

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