[Chimera-users] pdb to xml

Eric Pettersen pett at cgl.ucsf.edu
Fri Jun 24 15:43:09 PDT 2011

Hi Damien,
	There seems to be very few tools that output PDBML, and Chimera  
unfortunately is no exception. :-(  It doesn't even seem to be a  
format that OpenBabel can output.  The only tool that my googling  
uncovered is 3DNA.  It can apparently write PDBML, though I don't  
think it can handle non-nucleic acid structures [the documentation for  
3DNA leaves a little to be desired so I could be wrong about that  
	I hope you get lucky and find something that writes it!


                         Eric Pettersen
                         UCSF Computer Graphics Lab

On Jun 23, 2011, at 11:34 PM, Damien LARIVIERE wrote:

> Dear all,
> WritePDB enables to save a displayed structure in the pdb format.
> Is there a way to save the structure into the PDBML format?
> If not, do you know a (simple) way to do that?
> Many thanks
> Damien
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> Chimera-users at cgl.ucsf.edu
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