[Chimera-users] DCD to PDB file Residue number

Eric Pettersen pett at cgl.ucsf.edu
Tue Jun 8 15:36:45 PDT 2010

Hi Snoze,
	That information isn't preserved from the PSF.  I just now made some  
changes to preserve it so if you get tomorrow's daily build, the  
residue numbers should correspond to what's in the PSF.
	As an aside, the first trajectory format that Chimera supported was  
Amber, and Amber prmtop files don't have residue number information,  
so there was no provision for preserving it when other formats were  


                         Eric Pettersen
                         UCSF Computer Graphics Lab

On Jun 8, 2010, at 1:51 PM, snoze pa wrote:

> Dear Chimera Users,
> I have a simple query related to the residue numbers in chimera. If I
> will save pdb file in chimera then the residue numbers are not
> changing but if I will save a pdb file from DCD trajectory file then
> it set the first residue number to 1 and so on. How to save it to
> original PDB residue number, which is not starting from residue number
> 1.
> Thank you for your help.
> S
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