Changes between Version 1 and Version 2 of phenix-proposed-3-24-22


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Timestamp:
Mar 22, 2022, 4:56:14 PM (4 years ago)
Author:
pett
Comment:

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  • phenix-proposed-3-24-22

    v1 v2  
    11= What have we proposed?
    22
     3 Fragment extension:: ChimeraX requests Phenix to propose placement of the next several residues in a cryoEM map.
     4 Ligand placement:: ChimeraX requests Phenix to place a flexible ligand in a user selected region of a cryoEM map.
     5 Restraints:: ChimeraX will translate ISOLDE refinement restraints into Phenix format and hand off to Phenix.  ChimeraX will display Phenix automatically generated restraints.  An example restraint would be that a group of atoms is specified as rigid, or a metal position is held to nearby atoms.
     6 Validation:: ChimeraX will request validation problem lists from Phenix and allow user to fix problems, and request Phenix to run re-refinement.
     7 REST communication:: ChimeraX will utilize Phenix tools by making REST calls.  Also Phenix will be able to send data to a ChimeraX REST server for visualization.
     8