Changes between Version 1 and Version 2 of phenix-8-11-22


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Timestamp:
Aug 8, 2022, 5:50:05 PM (3 years ago)
Author:
pett
Comment:

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  • phenix-8-11-22

    v1 v2  
    11**Phenix**
    22 * Douse results-browsing tool; implemented all suggestions from #7066:
    3    * Presented tool at R24 meeting: well received but plenty of suggestions! #7066
    4    * Allow arbitrary arguments to be passed to douse
    5    * Go to next water after deletion
    6    * Working on refactoring to support stand-alone tool
     3   * Refactored code to support separate Check Waters tool
     4   * Change sphere depiction to stick
     5   * Reduce distance font side and # decimal places to reduce crowding
     6   * Always show H-bonds
     7   * H-bonds and Density table columns (lots of changes to table code)
     8   * Check Waters only:
     9      * Put in Structure Analysis category instead of Volume Data
     10      * Help page, courtesy of Elaine
     11   * Douse: radio buttons across top
     12   * Douse-launcher tool (Phenix→Water Placement)
    713
    814**ChimeraX completed**
    9  * More residue-labeling options in Actions menu
    10  * Select→Contacts menu item
    11  * Forward keystrokes from non-Help-Viewer floating tools
    12  * NIAID: Renumber residues command and tool
     15 * NIAID: Change Chain IDs command and tool
    1316 * Reference sequence for alignment numbering
    1417 * CZI: Realignment services
     
    1619**ChimeraX in progress**
    1720 * !Axes/Planes/Centroids tool
    18   * Needed table features makes this slow going: icons in headers, check buttons, color buttons, editable text cells, and have changes issue commands
     21  * NIAID: Dock Prep