Phenix

Fit Loops

• Revamped command/backend to handle possibly remodeling *only* a gap (no side residues)
• Fixed ChimeraX bug that incorrectly sequenced newly modeled gap residues
• Have tool warn user when modeling too many residues

Emplace Local

• Tool interface tweaks based on feedback
  • Left-align text
  • Align check boxes
  • Space between check boxes and bottom buttons

ChimeraX completed

• Tables support saving CSV/TSV files
• Shipped annotated SPICE file off to Tristan
• Preserve docked tool sizes
• Avoid weird initial window placement when multiple displays
• Allow one-letter codes in swapaa
• Missing-attribute operator (^)
• Worm support (internal + command/GUI; update presets)
• Fixed garbage-collection crash
• PDB-REDO support