Changes between Initial Version and Version 1 of phenix-4-11-24


Ignore:
Timestamp:
Apr 9, 2024, 11:52:36 AM (19 months ago)
Author:
Eric Pettersen
Comment:

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  • phenix-4-11-24

    v1 v1  
     1= Phenix =
     2
     3=== Fit Loops ===
     4 * Revamped command/backend to handle possibly remodeling *only* a gap (no side residues)
     5 * Fixed ChimeraX bug that incorrectly sequenced newly modeled gap residues
     6 * Have tool warn user when modeling too many residues
     7
     8=== Emplace Local ===
     9 * Tool interface tweaks based on feedback
     10   * Left-align text
     11   * Align check boxes
     12   * Space between check boxes and bottom buttons
     13
     14= ChimeraX completed =
     15 * Repeat last phi/psi in build structure if needed
     16 * Sequential model display controls in model panel
     17 * 'altlocs show/hide' command
     18 * Log now notes that an opened structure has altlocs
     19 * 'combine' command can retain chain IDs; smartened up combining sequences of combined chains
     20 * Swapaa/na allows multiple types
     21 * Work on moving to AmberTools23
     22 * Investigate garbage-collection crashes
     23 * Tweaks to atom typing for SPICE
     24 * Join models through non-peptide bond