Phenix

• Fixed bug in "phenix location" (wasn't setting location)
• Further work on Randy Read's fit-in-map tool, emplace_local:
  • Interactive adjustment of search center, and size of marker indicates search size
  • Move structure to fitted position rather than open a copy
  • Use emplace_local JSON output
  • For center-of-view search center:
    • Use pivot point or fixed center of rotation (if any), otherwise...
    • Use displayed map (if only one) instead of half map
    • Improved initial Z-depth estimate (bounding box face intercepts rather then bounding-plane intercepts)
  • Elaine created documentation
  • Emplace_local now can estimate resolution, change command and tool to make resolution optional
  • Awaiting emplace_local outputting transformation matrix

ChimeraX completed

• SwissDock format
• Build Structure "Invert" tab (invert chiral center) and command
• Palette and color-key support in Render By Attribute