Changes between Version 1 and Version 2 of phenix-2-27-25

Timestamp:

Feb 21, 2025, 5:07:30 PM (8 months ago)

Author:

Eric Pettersen

Comment:

--

phenix-2-27-25

@@ -2 +2 @@
 
 === Local EM Fitting ===
- * Browsing interface for multiple solutions
-   * Handle multiple sharpened maps
+ * Results dialog improvements
+   - Limits scores to a reasonable number of digits
+   - Keep sharpened map if shown
+   - Symmetry copies
+   - In-dialog help text
+     * Adjusted size of in-dialog help text
+   - Dock dialog so it's not easily lost
+ * Alerted Randy that emplace_local is broken in the latest Phenix release candidate
 
-{{{#!comment
 === Fit Ligand ===
- * Mandatory resolution command arg / tool widget
- * Tool's chain ID / res num widgets pass values to command
- * Made command fully functional, including checking availability of chain ID + res num
- * Interactive search-center adjustment
-}}}
+ * Sent Dorothee what I would need in ligandfit JSON output
+ * Tested a few systems and send a problem report to Tom Terwilliger
+   - Ligandfit was rejecting valid ligand PDB files
 
 = ChimeraX completed =
@@ -25 +28 @@
    - Don't recolor surface if colored externally
  * Handle problem where labels get deleted before structure is opened [missing structure + morph]
- * Set Qt's default locale to C, so that numeric validators produce values acceptable to float()
- * Profile Grids "alpha" release
- * "session-start" view created when session restored
- * Coordinate set slider responds to coordinate set addition/deletion
+ * Structure matching using alignment sequences; options:
+   - 
+
+ * Sequence renaming
+ * Aniso command
+ * Deployed !UserError alternative for tools