wiki:phenix-12-19-24

Version 2 (modified by Eric Pettersen, 10 months ago) ( diff )

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Phenix

Local EM Fitting

  • Browsing interface for multiple solutions
    • Handle multiple sharpened maps

ChimeraX completed

  • Added discussion of declaring dependencies on PyPi packages to programming documentation
  • Made AddH not check for updating missing-structure pseudobonds
  • Allow H-bond and clash/contact output to be on a per-residue basis
  • Updating a structure sequence when a residue type changes wasn't accounting for gaps
  • "center" option for open command
  • Altlocs
    • Small revamp of altlocs tool in preparation for "show all altlocs" capability
    • Update ribbon if backbone altlocs changed
  • Render by Attribute
    • Histogram scaling
    • Save to file button
    • Remember histogram markers on a per-attribute basis
    • Keep markers at same value position (rather than relative position) when expanding histogram range
  • Fixed bug making chains where internal residue is non-polymeric
  • Select by column identity
  • KVFinder tool/command

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