Changes between Version 1 and Version 2 of benchmarking


Ignore:
Timestamp:
Mar 14, 2019, 2:07:50 PM (7 years ago)
Author:
Greg Couch
Comment:

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Legend:

Unmodified
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  • benchmarking

    v1 v2  
    3434Total memory increase: 2691016K
    3535}}}
    36 == current results ==
     36== 2019-03-14 Results ==
    3737{{{
    38 UCSF ChimeraX version: 0.7 (2018-08-07)
     38UCSF ChimeraX version: 0.9 (2019-03-14)
    3939Running benchmark on wilkins.cgl.ucsf.edu
    40 Starting memory use:  856980K
     40Starting memory use:  345888K
    4141Average time: command
    42 28.54 ± 0.326: open 3j3q format mmcif loginfo false
    43 12.1109 ± 0.012: (3j3q mmcif) close
    44 Increased memory use: 2449992K
    45 0.1356 ± 0.017: open 3fx2 format pdb loginfo false
    46 0.0075 ± 0.0: (3fx2 pdb) close
    47 0.1234 ± 0.001: open 3fx2 format mmcif loginfo false
    48 0.0078 ± 0.0: (3fx2 mmcif) close
    49 Increased memory use: 2532K
    50 0.1862 ± 0.001: open 2hmg format pdb loginfo false
    51 0.0341 ± 0.0: (2hmg pdb) close
    52 0.2138 ± 0.029: open 2hmg format mmcif loginfo false
    53 0.0456 ± 0.0: (2hmg mmcif) close
    54 Increased memory use: 4372K
    55 5.698 ± 0.051: open 5xnl format pdb loginfo false
    56 0.386 ± 0.001: (5xnl pdb) close
    57 5.8888 ± 0.026: open 5xnl format mmcif loginfo false
    58 0.4913 ± 0.001: (5xnl mmcif) close
    59 Increased memory use: 45844K
    60 18.4314 ± 0.0: style ball (3j3q)
    61 Increased memory use: 17232K
    62 22.1381 ± 0.0: cartoon (3j3q)
    63 Increased memory use: 176648K
    64 Ending memory use:    3553600K
    65 Total memory increase: 2696620K
     4228.0613 ± 0.149: open 3j3q format mmcif loginfo false
     4312.8448 ± 0.748: (3j3q mmcif) close
     44Increased memory use: 2654124K
     450.1615 ± 0.028: open 3fx2 format pdb loginfo false
     460.0086 ± 0.0: (3fx2 pdb) close
     470.1629 ± 0.041: open 3fx2 format mmcif loginfo false
     480.0085 ± 0.0: (3fx2 mmcif) close
     49Increased memory use: -117348K
     500.1913 ± 0.003: open 2hmg format pdb loginfo false
     510.0337 ± 0.0: (2hmg pdb) close
     520.1947 ± 0.003: open 2hmg format mmcif loginfo false
     530.0433 ± 0.0: (2hmg mmcif) close
     54Increased memory use: 276K
     554.7655 ± 0.118: open 5xnl format pdb loginfo false
     560.3989 ± 0.008: (5xnl pdb) close
     575.3778 ± 0.042: open 5xnl format mmcif loginfo false
     580.5233 ± 0.016: (5xnl mmcif) close
     59Increased memory use: 45332K
     6017.9285 ± 0.0: style ball (3j3q)
     61Increased memory use: 66692K
     6219.7871 ± 0.0: cartoon (3j3q)
     63Increased memory use: 373732K
     64Ending memory use:    3368696K
     65Total memory increase: 3022808
    6666}}}