Changes between Initial Version and Version 1 of benchmarking

Timestamp:

Mar 14, 2019, 2:06:19 PM (7 years ago)

Author:

Greg Couch

Comment:

--

benchmarking

@@ +1 @@
+= Weekly Benchmarking Results =
+
+Benchmarks are run once-a-week using chimerax-daily.
+
+== 0.7 Results ==
+{{{
+UCSF ChimeraX version: 0.7 (2018-08-07)
+Running benchmark on wilkins.cgl.ucsf.edu
+Starting memory use:  953628K
+Average time: command
+27.9899 ± 0.065: open 3j3q format mmcif loginfo false
+11.9547 ± 0.125: (3j3q mmcif) close
+Increased memory use: 2444644K
+0.1213 ± 0.0: open 3fx2 format pdb loginfo false
+0.0073 ± 0.0: (3fx2 pdb) close
+0.1203 ± 0.001: open 3fx2 format mmcif loginfo false
+0.0075 ± 0.0: (3fx2 mmcif) close
+Increased memory use: 2276K
+0.2018 ± 0.02: open 2hmg format pdb loginfo false
+0.0348 ± 0.0: (2hmg pdb) close
+0.1869 ± 0.0: open 2hmg format mmcif loginfo false
+0.0441 ± 0.0: (2hmg mmcif) close
+Increased memory use: 4628K
+5.5969 ± 0.084: open 5xnl format pdb loginfo false
+0.3805 ± 0.003: (5xnl pdb) close
+5.8053 ± 0.011: open 5xnl format mmcif loginfo false
+0.4853 ± 0.001: (5xnl mmcif) close
+Increased memory use: 45588K
+18.0232 ± 0.0: style ball (3j3q)
+Increased memory use: 17488K
+21.7844 ± 0.0: cartoon (3j3q)
+Increased memory use: 176392K
+Ending memory use:    3644644K
+Total memory increase: 2691016K
+}}}
+== current results ==
+{{{
+UCSF ChimeraX version: 0.7 (2018-08-07)
+Running benchmark on wilkins.cgl.ucsf.edu
+Starting memory use:  856980K
+Average time: command
+28.54 ± 0.326: open 3j3q format mmcif loginfo false
+12.1109 ± 0.012: (3j3q mmcif) close
+Increased memory use: 2449992K
+0.1356 ± 0.017: open 3fx2 format pdb loginfo false
+0.0075 ± 0.0: (3fx2 pdb) close
+0.1234 ± 0.001: open 3fx2 format mmcif loginfo false
+0.0078 ± 0.0: (3fx2 mmcif) close
+Increased memory use: 2532K 
+0.1862 ± 0.001: open 2hmg format pdb loginfo false
+0.0341 ± 0.0: (2hmg pdb) close 
+0.2138 ± 0.029: open 2hmg format mmcif loginfo false
+0.0456 ± 0.0: (2hmg mmcif) close
+Increased memory use: 4372K
+5.698 ± 0.051: open 5xnl format pdb loginfo false
+0.386 ± 0.001: (5xnl pdb) close
+5.8888 ± 0.026: open 5xnl format mmcif loginfo false
+0.4913 ± 0.001: (5xnl mmcif) close
+Increased memory use: 45844K 
+18.4314 ± 0.0: style ball (3j3q)
+Increased memory use: 17232K 
+22.1381 ± 0.0: cartoon (3j3q)
+Increased memory use: 176648K
+Ending memory use:    3553600K 
+Total memory increase: 2696620K
+}}}