Changes between Version 51 and Version 52 of NeteSOW

Timestamp:

Dec 17, 2020, 2:21:50 PM (5 years ago)

Author:

Elaine Meng

Comment:

--

NeteSOW

@@ -258 +258 @@
 - TomG: maybe work to make ChimeraX show DICOM simple ITK segmentations
 - They will invite simple ITK developer(s) to our next meeting, Liv and Brad.
+
+== 12/17/2020 ==
+
+VR session with Uganda worked very well
+
+Let's arrange for Scooter to demo scNetViz to the NIAID folks; see also [https://science.sciencemag.org/content/370/6522/eaaz4910 recent Science paper] in which a Cytoscape app is used to map genetic interactions onto structures in ChimeraX
+
+We are drafting a task list for renewing the contract next year.
+
+Discussion of HubMap and ontologies.
+HubMap data has issues revealed in ChimeraX, like different brightnesses
+and z-planes for different tiles within the intestine data.
+Scooter knows Nils Gehlenborg (Harvard), maybe we could set up a meeting
+to discuss how ChimeraX can contribute to viewing HubMap data using
+capabilities beyond those in the portal. TomG would like more time to
+think about this (what exactly are the "beyond" capabilities: custom,
+in-depth analyses?) before we schedule a meeting.
+
+Eric has implemented getting sequence features from UniProt into ChimeraX,
+available in next daily build
+
+next meeting 1/14