Changes between Version 6 and Version 7 of Needed Command Functionality
- Timestamp:
- May 5, 2015, 1:19:54 PM (10 years ago)
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Needed Command Functionality
v6 v7 7 7 8 8 * '''open''' (suggest same general syntax as Chimera1, possibly adjusting prefixes) 9 * ''' repr''', '''ribrepr''', '''surfrepr''' (suggest consolidating into a new '''style''' command, adding pseudobonds)9 * '''display''' (maybe replace with '''show/hide''' and eliminating our current '''show''') 10 10 * '''color''' (suggest including pseudobonds, consolidating with '''rainbow''', but leaving color-by-attr and color-by-field separate) 11 * ''' display''' (suggest replacing with '''show/hide''' and eliminating our current '''show''')12 * '''r ibbon''' (suggest replacing with '''cartoon''' and including options for spline and cylinders)11 * '''ribbon''' (suggest replacing with '''cartoon''' and including spline and any other whole-chain parameters) 12 * '''repr''', '''ribrepr''','''ribscale''', '''surfrepr''' (suggest consolidating into a new '''style''' command, adding cartoon cylinder parameters, and including pseudobonds) 13 13 * '''volume''' (redundancy with show/hide/color etc. OK with me, but should review structure and keywords vs. the negotiable [http://www.cgl.ucsf.edu/home/meng/chi2/command-structure.html command guidelines].) 14 * '''set''' global settings: silhouettes, background color, shadows, lighting (if many sub-options, e.g. lighting, judiciously consider making a separate top-level command; also keeping a redundant but longer '''set''' command is OK with me) 14 15 15 16 16 Extremely useful catchalls, suggest retaining as permanent commands even though there will be some redundancy: 17 * '''set''' global settings: 17 * '''set''' global settings: silhouettes, background color, shadows, lighting (if many sub-options, e.g. lighting, judiciously consider making a separate top-level command; also keeping a redundant but longer '''set''' command is OK with me) 18 18 * '''setattr''' (general set-attributes functionality) 19 19