Changes between Version 68 and Version 69 of Needed Command Functionality

Timestamp:

May 18, 2015, 12:32:17 PM (10 years ago)

Author:

Elaine Meng

Comment:

--

Needed Command Functionality

@@ -75 +75 @@
 Again listed but not necessarily as commands:
 * smart molecule display
-  - IMO, this implies the need for '''preset''' with at least two interactive options: one with all atoms shown and one similar to the smart display
+  - IMO, this implies the need for '''preset''' with at least two interactive options: one with all atoms shown and one similar to the smart display; I'd vote for another one with transparent molecular surface, perhaps based on the color of the corresponding chain's ribbon
 * '''rangecolor''' or equivalent for color-by-attribute
   - then '''defattr''' would be useful
@@ -111 +111 @@
   - need better defaults than in Chimera1, at least for smart display
 * '''findclash''' (also needed for coloring surface interaction patches)
+  - should be easier than in Chimera1 to use contact defaults in command (the overall defaults are clash defaults)
 
 Expanded functionality of existing commands: