Changes between Version 38 and Version 39 of Needed Command Functionality


Ignore:
Timestamp:
May 7, 2015, 10:58:32 AM (10 years ago)
Author:
Elaine Meng
Comment:

--

Legend:

Unmodified
Added
Removed
Modified

  • Needed Command Functionality

    v38 v39  
    99* '''open''' (suggest same general syntax as Chimera1, possibly adjusting prefixes; covers both local files and web-fetch)
    1010* '''display''', '''modeldisplay''' (suggest replacing with '''show/hide''')
    11 * '''ribbon''' (suggest replacing with '''cartoon''' and including spline and any other whole-chain parameters as options to this command)
     11* '''ribbon''' (suggest replacing with '''cartoon''' and including spline, path smoothing, and any other whole-chain parameters as options to this command)
    1212* '''surface''' (see [https://www.rbvi.ucsf.edu/trac/chimera2/wiki/SurfaceCategories surface command and category thoughts]; should include calculation parameters, vertexDensity, visiblePatches)
    1313* '''repr''', '''ribrepr''', '''ribscale''', '''surfrepr''' (maybe consolidate into a new '''style''' command, generalizing ribbon to cartoon as per [http://www.cgl.ucsf.edu/home/meng/chi2/ribbons.html ribbons writeup], and including pseudobonds; I'm not sure consolidation is better, however, since consolidation makes longer commands, and for such frequently used functionality we need easy-to-type commands)