Changes between Version 37 and Version 38 of Needed Command Functionality

Timestamp:

May 6, 2015, 2:57:35 PM (10 years ago)

Author:

Elaine Meng

Comment:

--

Needed Command Functionality

@@ -6 +6 @@
 == Late summer release ==
 
-Initial versions (not necessarily final/full implementations) of:
+Initial versions (not necessarily full implementations, could be only some options) of:
 * '''open''' (suggest same general syntax as Chimera1, possibly adjusting prefixes; covers both local files and web-fetch)
 * '''display''', '''modeldisplay''' (suggest replacing with '''show/hide''')
 * '''ribbon''' (suggest replacing with '''cartoon''' and including spline and any other whole-chain parameters as options to this command)
 * '''surface''' (see [https://www.rbvi.ucsf.edu/trac/chimera2/wiki/SurfaceCategories surface command and category thoughts]; should include calculation parameters, vertexDensity, visiblePatches)
-* '''repr''', '''ribrepr''', '''ribscale''', '''surfrepr''' (suggest consolidating into a new '''style''' command, generalizing ribbon to cartoon as per [http://www.cgl.ucsf.edu/home/meng/chi2/ribbons.html ribbons writeup], and including pseudobonds)
+* '''repr''', '''ribrepr''', '''ribscale''', '''surfrepr''' (maybe consolidate into a new '''style''' command, generalizing ribbon to cartoon as per [http://www.cgl.ucsf.edu/home/meng/chi2/ribbons.html ribbons writeup], and including pseudobonds; I'm not sure consolidation is better, however, since consolidation makes longer commands, and for such frequently used functionality we need easy-to-type commands)
 * '''color''' (leaving color-by-attr and color-by-scalar-field separate; '''rainbow''' might be merged with those two)
 * '''volume''' (redundancy with show/hide/color etc. OK with me, but should review structure and keywords ''vs.'' the negotiable [http://www.cgl.ucsf.edu/home/meng/chi2/command-structure.html command guidelines])