Changes between Version 27 and Version 28 of Needed Command Functionality


Ignore:
Timestamp:
May 5, 2015, 4:37:17 PM (10 years ago)
Author:
Elaine Meng
Comment:

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  • Needed Command Functionality

    v27 v28  
    4242
    4343Command accoutrements:
    44 * more built-in specs like protein, nucleic acid, element symbols, ''etc.''
     44* more built-in specs like ions, ligand, helix, strand, protein, ''etc.''
    4545* full atomspecs (see [http://www.cgl.ucsf.edu/home/meng/chi2/frameatom_spec2.html Chimera2 atomspec writeup])
    4646
     
    6161* '''2dlabels'''
    6262* '''colorkey'''
     63* adjustable material properties ('''setattr''' or other)
    6364* background color-gradient ('''set''' or top-level '''background''' command)
    6465* multiple-layer transparency ('''set''' or other command control)
    6566* '''save/export''' PDB, volume data, ''etc.''
    6667
     68Command accoutrements:
     69* more built-in specs like functional groups, amino acid categories, element symbols, ''etc.''
     70
     71== Highly desirable ==
     72
     73Again listed but not necessarily as commands:
     74* '''cartoon''' (or whatever we're calling the ribbons-plus command) options for cylinders/pipes, planks
     75* tube option(s) for cartoon '''style'''
     76* ring fill, aromaticity, bond multiplicity options for atom '''style'''
     77* '''surface''' provisions for multiple surfaces on same atoms, including SAS and/or SES
     78
    6779== Random thoughts ==
    6880* Hmm, I don't recall any discussion of motion-scripting or other frame-argument commands (see [http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/movies.html#moviecommands Chimera1 movie-related commands])