Changes between Version 111 and Version 112 of Needed Command Functionality

Timestamp:

Nov 3, 2015, 11:31:04 AM (10 years ago)

Author:

Elaine Meng

Comment:

--

Needed Command Functionality

@@ -19 +19 @@
 - '''alias''' (target-defining function) → '''namespec'''
 - ~~'''2dlabels''' → '''title'''~~ (done)
+- ~~'''ribbon''' → '''cartoon'''~~ (done but we still have '''ribbon''' as a synonym)
 
 == Late summer release ==
@@ -31 +32 @@
 * '''display''', '''modeldisplay''' (suggest replacing with '''show/hide''')
   - this could control pseudobonds indirectly if they are hidden automatically when endpoint atoms are hidden, but we may want to make it act on them directly, or else '''setattr''' (see below) might be the only way
-* '''ribbon''' (suggest replacing with '''cartoon''' and including spline, path-smoothing, and any other whole-chain parameters as options to this command)
+* '''cartoon''' including spline, path-smoothing, and any other whole-chain parameters as options
   - see [http://www.cgl.ucsf.edu/home/meng/chi2/ribbons.html ribbons writeup]
   - for this release, just ribbons (not pipes/cylinders or worm-by-attr)
+  - as of Nov 2 2015 partial implementation: protein only, no controls for style (width, thickness, cross-sectional shape)
 * '''surface''' solvent-excluded molecular surface
   - see [[SurfaceCategories]] discussion of categories and command design